mRNA_P-littoralis_Contig1273.4.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1273.4.1
Unique NamemRNA_P-littoralis_Contig1273.4.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig1273.4.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 333 bits (855), Expect = 6.960e-91
Identity = 166/168 (98.81%), Postives = 167/168 (99.40%), Query Frame = 1 
Query:  403 RVTRAISRVPNKKTLSELRRLSYAFPAMGEFPDVAHRDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQDWNQVPGLDCGNTYAPVCRIQSVRMVACITVEFNLIFDQMDV 906
            RVTRAISRVPNKKTLSELRRLSYAFPAMGEFPDVAHRDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQ WNQVPGLDCG+TYAPVCRIQSVRMVACITVEFNLIFDQMDV
Sbjct: 1259 RVTRAISRVPNKKTLSELRRLSYAFPAMGEFPDVAHRDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDV 1426
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BLAST of mRNA_P-littoralis_Contig1273.4.1 vs. uniprot
Match: A0A6H5KMG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMG0_9PHAE)

HSP 1 Score: 308 bits (789), Expect = 2.710e-87
Identity = 208/302 (68.87%), Postives = 210/302 (69.54%), Query Frame = 1 
Query:    1 DISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPEPGDGAXXXXXXXXXXXXXXXXXXXXTPPGASGTGSAPVGAASRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSVXXXXXXXXXXSTSAPPDTRVTRAISRVPNKKTLSELRRLSYAFPAMGEFPDVAHRDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQDWNQVPGLDCGNTYAPVCRIQSVRMVACITVEFNLIFDQMDV 906
            DISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPEPGD  XXXXXXXXXXXXXXXXXXXXTPP AS T                                         +V            +     RVTRAISRVPNKKTLSELRRLSYAFPAMGEFPDVAHRDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQ                              VEFNLIFDQMDV
Sbjct:  210 DISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPEPGDXXXXXXXXXXXXXXXXXXXXXXTPPRASVT----------------------------------------PAVALRVVHLRVVGVA-----RVTRAISRVPNKKTLSELRRLSYAFPAMGEFPDVAHRDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQ------------------------------VEFNLIFDQMDV 436
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BLAST of mRNA_P-littoralis_Contig1273.4.1 vs. uniprot
Match: A0A6H5JYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB5_9PHAE)

HSP 1 Score: 315 bits (807), Expect = 3.350e-86
Identity = 191/302 (63.25%), Postives = 196/302 (64.90%), Query Frame = 1 
Query:    1 DISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPEPGDGAXXXXXXXXXXXXXXXXXXXXTPPGASGTGSAPVGAASRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSVXXXXXXXXXXSTSAPPDTRVTRAISRVPNKKTLSELRRLSYAFPAMGEFPDVAHRDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQDWNQVPGLDCGNTYAPVCRIQSVRMVACITVEFNLIFDQMDV 906
            DISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPEPGDGA        XXXX        TPPGAS                                                                VT A++       +  LR +  A            RDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQ WNQVPGLDCG+TYAPVCRIQSVRMVACITVEFNLIFDQMDV
Sbjct:  822 DISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPEPGDGASSPAASMPXXXXAGSTFSPATPPGAS----------------------------------------------------------------VTPAVAL-----RVVHLRVVGVA------------RDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDV 1042
[Close]
BLAST of mRNA_P-littoralis_Contig1273.4.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 307 bits (787), Expect = 1.700e-84
Identity = 202/301 (67.11%), Postives = 208/301 (69.10%), Query Frame = 1 
Query:    1 DISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPEPGDGAXXXXXXXXXXXXXXXXXXXXTPPGASGTGSAPVGAASRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSVXXXXXXXXXXSTSAPPDTRVTRAISRVPNKKTLSELRRLSYAFPAMGEFPDVAHRDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQDWNQVPGLDCGNTYAPVCRIQSVRMVACITVEFNLIFDQMD 903
            DISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPEPGDGA XXXXXXXXXXXXXXXXXXXTPPGAS                                                                VT A++       +  LR +  A            RDATLGFTEYA TVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRS VPPERKRIKSKWVFKRKADGTFKGRVVAQ WNQVPGLDCG+TYAPVCRIQSVRMVACITV+FNLIFDQMD
Sbjct:  399 DISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPEPGDGASXXXXXXXXXXXXXXXXXXXTPPGAS----------------------------------------------------------------VTPAVAL-----RVVHLRVVGVA------------RDATLGFTEYASTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSGVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVDFNLIFDQMD 618
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BLAST of mRNA_P-littoralis_Contig1273.4.1 vs. uniprot
Match: A0A6H5KJN3_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN3_9PHAE)

HSP 1 Score: 306 bits (785), Expect = 2.140e-83
Identity = 203/302 (67.22%), Postives = 208/302 (68.87%), Query Frame = 1 
Query:    1 DISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPEPGDGAXXXXXXXXXXXXXXXXXXXXTPPGASGTGSAPVGAASRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSVXXXXXXXXXXSTSAPPDTRVTRAISRVPNKKTLSELRRLSYAFPAMGEFPDVAHRDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQDWNQVPGLDCGNTYAPVCRIQSVRMVACITVEFNLIFDQMDV 906
            DISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPEPGD  XXXXXXXXXXXXXXXXXXXXTPPGAS                                                                VT A++       +  LR +  A            RDATLGFTEYAYTVGG QPDVPRTIQEARASPD TKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQ WNQVPGLDCG+TYAPVCRIQSVRMVACITVEFNLIFDQMDV
Sbjct:  916 DISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPEPGDXXXXXXXXXXXXXXXXXXXXXXTPPGAS----------------------------------------------------------------VTPAVAL-----RVVHLRVVGVA------------RDATLGFTEYAYTVGGEQPDVPRTIQEARASPDTTKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDV 1136
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BLAST of mRNA_P-littoralis_Contig1273.4.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 290 bits (743), Expect = 7.590e-77
Identity = 176/302 (58.28%), Postives = 182/302 (60.26%), Query Frame = 1 
Query:    1 DISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPEPGDGAXXXXXXXXXXXXXXXXXXXXTPPGASGTGSAPVGAASRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSVXXXXXXXXXXSTSAPPDTRVTRAISRVPNKKTLSELRRLSYAFPAMGEFPDVAHRDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQDWNQVPGLDCGNTYAPVCRIQSVRMVACITVEFNLIFDQMDV 906
            DISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPEP                                                                                              VT A++       +  LR +  A            RDATLGFTEYA+TVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQ WNQVPGLDCG+TYAPVCRIQSVRMVACITVEFNLIFDQMDV
Sbjct: 1071 DISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPEP----------------------------------------------------------------------------------------------VTPAVAL-----RVVHLRVVGVA------------RDATLGFTEYAHTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDV 1261
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BLAST of mRNA_P-littoralis_Contig1273.4.1 vs. uniprot
Match: A0A6H5KPN4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPN4_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 2.960e-72
Identity = 121/160 (75.62%), Postives = 139/160 (86.88%), Query Frame = 1 
Query:  427 VPNKKTLSELRRLSYAFPAMGEFPDVAHRDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQDWNQVPGLDCGNTYAPVCRIQSVRMVACITVEFNLIFDQMDV 906
            +PN KT+ E RR+SYAF A GEFPDVAHRD + GFTEYAY +G  QPD PRTI+EARA PD  +WNAAAERE+ SL +R+VYKLVPR+AVPP RKRIKSKWVFKRKADG+FKGR+VAQ WNQVPGLDCG+TYAPVCR+QS+RM+ACI V+FNL  DQMDV
Sbjct:    1 MPNAKTIRERRRISYAFTAKGEFPDVAHRDGSFGFTEYAYAMGASQPDAPRTIEEARAMPDGEQWNAAAEREIASLKERQVYKLVPRTAVPPGRKRIKSKWVFKRKADGSFKGRLVAQGWNQVPGLDCGSTYAPVCRLQSIRMLACIVVQFNLELDQMDV 160
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BLAST of mRNA_P-littoralis_Contig1273.4.1 vs. uniprot
Match: A0A6H5JC75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC75_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 3.830e-67
Identity = 127/190 (66.84%), Postives = 150/190 (78.95%), Query Frame = 1 
Query:  337 RGSVXXXXXXXXXXSTSAPPDTRVTRAISRVPNKKTLSELRRLSYAFPAMGEFPDVAHRDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQDWNQVPGLDCGNTYAPVCRIQSVRMVACITVEFNLIFDQMDV 906
            RGS           STSAP    VTR+ SR+PN KT+ ELRR+ YAF A G+FPDVAHRD + GFTEYAY +G  QPDVPRTIQEARA+PD  +WN AAERE+ SL +R++Y+LVPR+AVPP RKR KSKWVFK KADG+FKGR+VAQ WNQ PGL CG+TYAPVCR+QS+RM+ACI V+FNL  DQMD+
Sbjct:  913 RGSASGSGSRGERGSTSAP---AVTRSSSRMPNAKTIRELRRIYYAFTAKGDFPDVAHRDGSFGFTEYAYAMGASQPDVPRTIQEARATPDRAQWNTAAEREIASLKERQLYELVPRTAVPPGRKRTKSKWVFKSKADGSFKGRLVAQGWNQGPGLHCGSTYAPVCRLQSIRMLACIAVQFNLELDQMDM 1099
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BLAST of mRNA_P-littoralis_Contig1273.4.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE)

HSP 1 Score: 252 bits (643), Expect = 1.940e-66
Identity = 119/156 (76.28%), Postives = 136/156 (87.18%), Query Frame = 1 
Query:  439 KTLSELRRLSYAFPAMGEFPDVAHRDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQDWNQVPGLDCGNTYAPVCRIQSVRMVACITVEFNLIFDQMDV 906
            +T+ ELRR+SYAF A GEFPDVAHRD + GFTE+AY +G  QPDVPRTI+EARA PD  +WNAAAERE+ SL +R+VYKLVPR+AVPP RKRIKSKWVFKRKA G+FKGR+VAQ WNQVPGLDCGNTYAPVCR QS+RM+ACI V+FNL  DQMDV
Sbjct:  414 ETIRELRRISYAFTAKGEFPDVAHRDGSFGFTEHAYAMGASQPDVPRTIEEARAMPDGEQWNAAAEREIASLKERQVYKLVPRTAVPPGRKRIKSKWVFKRKAGGSFKGRLVAQGWNQVPGLDCGNTYAPVCRFQSIRMLACIAVQFNLELDQMDV 569
[Close]
BLAST of mRNA_P-littoralis_Contig1273.4.1 vs. uniprot
Match: A0A6H5KWT4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWT4_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 1.070e-65
Identity = 114/160 (71.25%), Postives = 135/160 (84.38%), Query Frame = 1 
Query:  427 VPNKKTLSELRRLSYAFPAMGEFPDVAHRDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQDWNQVPGLDCGNTYAPVCRIQSVRMVACITVEFNLIFDQMDV 906
            +PN KT+ ELRR+SYA  A GEFPDV HRD + GFTEYAY +G  QPDVP+TI+EARA PD  +WN AAERE+ SL +R+V+KLVPR+AVPP RKRIKSKWVFKRKADG+FKGR+V Q WNQVPGLD G+T+APVCR+QS+RM+AC  V+FNL  DQMDV
Sbjct:    1 MPNAKTIRELRRISYAITAKGEFPDVTHRDGSFGFTEYAYAMGASQPDVPQTIEEARAMPDGEQWNTAAEREIASLKERQVHKLVPRTAVPPGRKRIKSKWVFKRKADGSFKGRLVVQGWNQVPGLDYGSTFAPVCRLQSIRMLACTAVQFNLELDQMDV 160
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1273.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J842_9PHAE6.960e-9198.81Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KMG0_9PHAE2.710e-8768.87Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JYB5_9PHAE3.350e-8663.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNH5_9PHAE1.700e-8467.11Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KJN3_9PHAE2.140e-8367.22Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KJH6_9PHAE7.590e-7758.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPN4_9PHAE2.960e-7275.63Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JC75_9PHAE3.830e-6766.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KL37_9PHAE1.940e-6676.28Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KWT4_9PHAE1.070e-6571.25Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1273contigP-littoralis_Contig1273:29593..33207 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog5479.M3JSF6
PFAMsRVT_2,Retrotran_gag_2,gag_pre-integrs,rve,zf-CCHC
Model size3615
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.29e-20
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,38DPC@33154|Opisthokonta,3NUZ7@4751|Fungi,3QNZW@4890|Ascomycota,3RTT4@4891|Saccharomycetes,47E39@766764|Debaryomycetaceae
DescriptionTransposable element
Cds size429
COG categoryL
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789566.2917032-UTR-P-littoralis_Contig1273:29592..300751680789566.2917032-UTR-P-littoralis_Contig1273:29592..30075Pylaiella littoralis U1_48UTRP-littoralis_Contig1273 29593..30075 +
1680789566.3133593-UTR-P-littoralis_Contig1273:30504..332071680789566.3133593-UTR-P-littoralis_Contig1273:30504..33207Pylaiella littoralis U1_48UTRP-littoralis_Contig1273 30505..33207 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789566.3038154-CDS-P-littoralis_Contig1273:30075..305041680789566.3038154-CDS-P-littoralis_Contig1273:30075..30504Pylaiella littoralis U1_48CDSP-littoralis_Contig1273 30076..30504 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1273.4.1prot_P-littoralis_Contig1273.4.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1273 30076..30504 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1273.4.1

>prot_P-littoralis_Contig1273.4.1 ID=prot_P-littoralis_Contig1273.4.1|Name=mRNA_P-littoralis_Contig1273.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=143bp
MGEFPDVAHRDATLGFTEYAYTVGGVQPDVPRTIQEARASPDATKWNAAA
EREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQD
WNQVPGLDCGNTYAPVCRIQSVRMVACITVEFNLIFDQMDVT*
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mRNA from alignment at P-littoralis_Contig1273:29593..33207+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1273.4.1 ID=mRNA_P-littoralis_Contig1273.4.1|Name=mRNA_P-littoralis_Contig1273.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3615bp|location=Sequence derived from alignment at P-littoralis_Contig1273:29593..33207+ (Pylaiella littoralis U1_48)
GACATCTCCACCGTCCACAACCGTGACCTTGGGACCAACTCCGCAGACCC
TGCTCCTGCCGCCGAGGATGCGCCTGCGGACGACAGCCTTGCCTCGCCTG
GAGGAGTCAGCCCTCCTGAGCCGGGTGACGGTGCATCCTCACCGGCCGCA
TCGTCGTCTGCTCCTGCTCCGGCCGGTTCAACATCCAGTCCTGCGACGCC
GCCTGGAGCGTCGGGTACTGGTTCTGCTCCAGTTGGCGCTGCATCGCGGG
GTGGTTCTGCGCGTGGGCGTGGTTCATCTCGTGGTGGCAGTGACGCCCGC
GGTGGCTCTTCGCGTGGTGCATCTACGCGTGGTGGGCGTGGCTCGGTGAG
TGGACGTGATTCTCGTAGTGGACGCAGCTCCACGTCAGCTCCTCCTGACA
CCAGGGTTACCCGGGCAATATCGCGCGTGCCCAACAAGAAGACCCTCAGC
GAACTTCGTCGACTCTCGTATGCGTTTCCCGCGATGGGGGAATTTCCTGA
CGTTGCGCACAGGGACGCCACGTTGGGCTTCACGGAATACGCATACACCG
TAGGGGGAGTACAACCAGACGTTCCTAGAACCATTCAGGAAGCACGGGCT
TCACCGGACGCAACGAAGTGGAACGCAGCCGCTGAACGCGAGATGAAAAG
CCTCAGCGACCGCAAGGTCTACAAGCTCGTCCCGCGCTCGGCCGTCCCTC
CGGAAAGGAAGCGCATCAAGTCCAAGTGGGTGTTCAAACGCAAGGCCGAC
GGGACTTTCAAGGGACGTGTCGTGGCCCAGGATTGGAACCAAGTTCCCGG
ACTCGACTGCGGCAACACCTACGCTCCAGTGTGCAGGATCCAGAGCGTGC
GAATGGTGGCGTGCATCACAGTTGAGTTCAACCTCATCTTCGATCAGATG
GATGTAACCTAATGGACCTCATCAACAACTTCGACGTCAACGAGTTCACC
GCCGTCGAATATAAAGGAAAATGAATGATTTGTTTGTTTGAATTTTCTGT
TTCGGATTCAGTTTACATTTTCATTTTAGTTATGTAGGAAACAAGTACTA
ACACGTAATTGAAACACGGATGAAACGCATTTACTTGCTAATTATCATCA
TTAGTTTGGTACAATTCAGAGCGACTTTCATTGAGGAGGAGTGTTATGGA
AATGTTAGCACATAGCCATTATGAGTCAATGTTCAGTAGCACTGCACTTG
TACGTCGTAGATCATCGTAGATCTGTCATATGCCGGTTGGTATGTAACGT
GCGTTGTATATGCGGAGGAATTACTTCTGTAGGATTCTATGTTGCCTTGA
CGAGTAGCTCACTCTCTCGTGTGGATCCTTCCTGACTGTCTGGCATCGTA
GCCATCCTGGTCATCTCCAGTACCCAGCCATCTTCTGGACTCCTGCATAC
TCTGCGGTCTATCTGTGTGTGTTGGCCACATAAGCGCCAGTGTTTACAAC
ATCTTGTCACCTTCTTCATCACACAGAAGCACTCACGTCTTCCAAGGCGT
CCACTACACTAGTGTCACCAACTTGATTAGCGTTAAGGACACAGCCTCTC
TGCCACCTTGCTGGGGTATACCACAATATCCATCATACAAACATCAAACA
TACCATCATAATGAGAAACAATAGGCCGCGCTTCGTTTCAACCGATTTCA
TTTCCTTACGATCCTTGCTGTCCGCGAGTTTTGTCGTAACAAATGGCGGT
GTTTGCAGTCTGATCATCTACTGTATGACATAGTTTGCTGCTGCTTGCGG
CAGTGGCTTTTCGCTGCTCCTCCTATTGCTGTTTAGTCACGTTTCATTCA
TCTCTGTAGTGTTTACCCCTCTCGGTCCAACTCCTCCAGCGAAAGAGAAG
CAGCGAGTGCCTCCTCTGTCGGTGAGGGTGACGGAATAGAGATGTCAGCC
GGCATAATAGGCGATGAGAGTGCTGGGGCGGAAGGGGATGGGACAAGCGA
GGATGGCCAGACAGAGGCAGTGGGAAAGGAAGAGGAGGGTGATAATTTGA
TGGAAATGGATTGGATTACGGCCATATTTTTGGAGAGGCGGACGGGCTTA
GGGCGACCGCAGAGGCCATTCTGGGGGTACAAGCGTGAGGACCAGCGCGA
AATATTGCGGTAGTGTCGGGTATGATCATGGAAGACGCAGCGGTGGTGGG
TGGTGAGCGGACATACGGTGGAGACAAGTTGCTCGGGTGTTTATTGTTTT
GCGCATAGAAGTGATGGTGTTCCCTCTCGTTGCTGTTATCATACTGTGTC
TATGAACGATTAGTGTTTGTTTGTACAAAATGTACGATGTTTACGAGTAA
TAAGGGTGTACCATCAGTTAGGTACTCCACATGATCTTGAGTGTTATTTT
TGCTATTCTGGAGCGATAATAGTTTTGGGGAAATTGCTTGAAAAATGACC
CCAACAAGCAAATGGATTTGCAATACACTGCTCTACAGGATCCCGTTTTC
TGCCGGGGCATCAATATTTCTAGAAACGTGTGTCGTACACACAGAAAATA
TATTATTGGTCAGTGTTGAGACGCCCAGCTGACTATTCGCGCACTAAAAT
TCAATACTACATTTTGTGAGCGTTGCATGATTCTGCTGTTTGTGTCATGC
TTCTTCTTCGTGTATCACAAGTCGATTATATTGTTGGAGCGAATTGTTTG
TTGTATGTGTGTGTAGAGGTGTTGGAGAGGTTGGTGATCGTGCTACTGGA
ATCTTTATCGTCGTACTGTGCTGGTGGGTAGCTCGCATTCATGTAACACG
CCAGTGCCCGCTCTCTTTGCCGTTTTTTTGTTTGCCGTATGATATGTGCG
CCCATATGCGAACGGACGGGGCACCCCAAGCAGCCGCACCAACTGCTACG
CATTTTTCAGAGAGTCATTTGCATCGGTCTAGACCGTGATGAAATTTGCC
AGTAGTAGCTAAGATGGCAGCCTGTTTCTACACTGAGGCTGATAGTGGCG
ACAGATCTCTTTTTGGGTATCAGGCAGGATAAGTACAGTAGGAAACTAGC
CGTCTTGTCGGGTGTCCCATCACTCCCTGCTGTTTTTAGCGCGTGTGTCG
ATGTTTGTACTTCAGATTAGATGTGGTGAGGAAGAGCAATCCGGTTGGTC
GTATTACTCCGAGCGTAAGCAAAGACCACTACTGGCAGTGGGTTACCCGT
ATAATCACCATAATCACCATCGCACGACCAGTTGTGATTTGAGGACGTAC
GCTCGTCCTGACCGTGGTTATTTGAAGTGGCGATATGCGAAATGCGTCTG
GCGTTGACGGAAGTTGTGATCGAGTGCAACTGCTACGTTGGATTTGTTTG
CTCGAGGGTTTGAATTGCTTGAAGGTCATTGGGTTAGCTATTACCGTATC
TCCAATTTACGTATGAGGTATTTGTCCGGAAAGAGAACGACGACCGCATG
AGGAGTAAACGTCAGTGTGACAAGCGACACCAGCCATGATATGGACGATT
TGTGGCATGAAACACCTTTATTGGTGTGTGTGTTTATTGTGATGAACTTA
TTCTCGTCGTGTGGTTTCCGACAGCGGCTTTGCCCTTGTCACTGTTGATG
CAGCGCTACGCTATTGTCAAGGATGCCTTCTGTGGGTACTGGGTTCGTTG
CCTGACAGCCATTTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1273:29593..33207+

>mRNA_P-littoralis_Contig1273.4.1 ID=mRNA_P-littoralis_Contig1273.4.1|Name=mRNA_P-littoralis_Contig1273.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=429bp|location=Sequence derived from alignment at P-littoralis_Contig1273:29593..33207+ (Pylaiella littoralis U1_48)
ATGGGGGAATTTCCTGACGTTGCGCACAGGGACGCCACGTTGGGCTTCAC
GGAATACGCATACACCGTAGGGGGAGTACAACCAGACGTTCCTAGAACCA
TTCAGGAAGCACGGGCTTCACCGGACGCAACGAAGTGGAACGCAGCCGCT
GAACGCGAGATGAAAAGCCTCAGCGACCGCAAGGTCTACAAGCTCGTCCC
GCGCTCGGCCGTCCCTCCGGAAAGGAAGCGCATCAAGTCCAAGTGGGTGT
TCAAACGCAAGGCCGACGGGACTTTCAAGGGACGTGTCGTGGCCCAGGAT
TGGAACCAAGTTCCCGGACTCGACTGCGGCAACACCTACGCTCCAGTGTG
CAGGATCCAGAGCGTGCGAATGGTGGCGTGCATCACAGTTGAGTTCAACC
TCATCTTCGATCAGATGGATGTAACCTAA
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