prot_P-littoralis_Contig127.122.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig127.122.1
Unique Nameprot_P-littoralis_Contig127.122.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length125
Homology
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BLAST of mRNA_P-littoralis_Contig127.122.1 vs. uniprot
Match: A0A6H5JRG8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG8_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 1.820e-12
Identity = 39/85 (45.88%), Postives = 52/85 (61.18%), Query Frame = 0 
Query:   41 RRGRSTKITGFCCKANGSTGCAAAKKHRSGKCVHTYVVALGVWGSEWGIETPLVMDEGEEEDSGDEGIGTGAGEYKCNTPGFIAK 125
            R  R +   G    ANG T C AA+K + G+CVHT + ALGV GS+   E    +DE + EDSG+EG+G+ A EY+ N P F +K
Sbjct:  152 RHQRPSSHIGLAAAANGGTPCGAARKSKRGRCVHTNITALGVMGSQISEEP---IDEEKGEDSGEEGVGSAASEYRRNKPAFASK 233
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BLAST of mRNA_P-littoralis_Contig127.122.1 vs. uniprot
Match: A0A6H5K1E3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1E3_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 1.400e-5
Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = 0 
Query:   84 GSEWGIETPLVMDEGEEEDSGDEGIGTGAGEYKCNTPGFIA 124
            GS+ G  +PL +D G +EDSGDEG+G GA E+K N PGF+A
Sbjct:    2 GSDCGSSSPLNLDGGSDEDSGDEGVGPGAAEHKRNAPGFVA 42
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig127.122.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JRG8_9PHAE1.820e-1245.88Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K1E3_9PHAE1.400e-558.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig127contigP-littoralis_Contig127:498125..498767 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig127.122.1mRNA_P-littoralis_Contig127.122.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig127 498125..498767 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig127.122.1 ID=prot_P-littoralis_Contig127.122.1|Name=mRNA_P-littoralis_Contig127.122.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=125bp
MQLGDRQSYVVYHPANRSIPGSWAAVEAENESGGGRHPTSRRGRSTKITG
FCCKANGSTGCAAAKKHRSGKCVHTYVVALGVWGSEWGIETPLVMDEGEE
EDSGDEGIGTGAGEYKCNTPGFIAK
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