prot_P-littoralis_Contig1264.15.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1264.15.1
Unique Nameprot_P-littoralis_Contig1264.15.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length103
Homology
BLAST of mRNA_P-littoralis_Contig1264.15.1 vs. uniprot
Match: A0A6H5JY17_9PHAE (SWIM-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY17_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 8.410e-13
Identity = 52/113 (46.02%), Postives = 67/113 (59.29%), Query Frame = 0
Query:    4 EKVSEILRTVMVDKALELQAEIDQLVKFELHDPSGGPKTNSPAQAPKKGRHTNKRGG--------------GATGSAPPTTGNPEGRLENSRRNTRMRYSWGPGSG---KRIK 99
            E VSEILRTV   KA+E+QA++D+ V+F+L + +G     +PAQ  K GR    + G              G TGSA P  GNP+GR++ SRR  RMR S GPGSG   +RIK
Sbjct:  486 ENVSEILRTVPHAKAMEIQADLDKWVRFQLAEATGQNSAKNPAQVKKAGRPKKSKSGEQQEKRGDGNGAPPGQTGSAKPV-GNPQGRMDKSRRAKRMRDSAGPGSGGPSRRIK 597          
BLAST of mRNA_P-littoralis_Contig1264.15.1 vs. uniprot
Match: A0A6H5L2H3_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H3_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 9.520e-9
Identity = 44/109 (40.37%), Postives = 62/109 (56.88%), Query Frame = 0
Query:    4 EKVSEILRTVMVDKALELQAEIDQLVKFELHDPSGGPKTNSPAQAPKKGRHTNKRGGGA-------------TGSAPPTTGNPEGRLENSRRNTRMRYSWGPGSGKRIK 99
            E V+EI+RTV   KALE+QAE+D+ V+FEL + +G  K+ +PAQ   KGR    +  G+             +GS  P  GNPEGR + SRR   ++   G GSG + +
Sbjct:  443 ENVTEIMRTVPHAKALEIQAELDKWVRFELAEATGENKSGNPAQVKAKGRPKKSKSEGSKQDRHDDNGAPADSGSVQPV-GNPEGRRDKSRREKMIKDVSGAGSGAKTR 550          
BLAST of mRNA_P-littoralis_Contig1264.15.1 vs. uniprot
Match: A0A6H5LMA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMA8_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 3.460e-8
Identity = 40/100 (40.00%), Postives = 57/100 (57.00%), Query Frame = 0
Query:    4 EKVSEILRTVMVDKALELQAEIDQLVKFELHDPSGGPKTNSPAQAPKKGRHTNKRGGGA-------------TGSAPPTTGNPEGRLENSRRNTRMRYSW 90
            E V+EI+RTV   KALE+QAE+D+ V+F+L + +G  K+ + AQ   KGR    +  G+             +GS  P  GNPEGR + SRR  R++  W
Sbjct:    6 ESVTEIMRTVPHAKALEIQAELDKWVRFQLAEATGENKSGNSAQVKAKGRPKKSKSEGSKQDRHDDNGAPADSGSVQPV-GNPEGRRDKSRREKRIKEVW 104          
BLAST of mRNA_P-littoralis_Contig1264.15.1 vs. uniprot
Match: A0A6H5JYU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYU5_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 1.200e-5
Identity = 38/92 (41.30%), Postives = 51/92 (55.43%), Query Frame = 0
Query:    4 EKVSEILRTVMVDKALELQAEIDQLVKFELHDPSGGPKTNSPAQAPKKGRHTNKRGGGA-------------TGSAPPTTGNPEGRLENSRR 82
            E V+E  RT    KALE+QAE+D+ V+F+L D +G  K+ +PAQ   KGR    +  G+             +GS  P  GNPEGR + SRR
Sbjct:  373 ENVTETRRTAPHAKALEIQAELDKWVRFQLADATGENKSGNPAQVKAKGRPNKSKSEGSKQDRHDDNGAPADSGSVQPV-GNPEGRTDKSRR 463          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1264.15.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JY17_9PHAE8.410e-1346.02SWIM-type domain-containing protein n=3 Tax=Ectoca... [more]
A0A6H5L2H3_9PHAE9.520e-940.37SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5LMA8_9PHAE3.460e-840.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYU5_9PHAE1.200e-541.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1264contigP-littoralis_Contig1264:19204..19512 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1264.15.1mRNA_P-littoralis_Contig1264.15.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1264 18545..19590 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1264.15.1 ID=prot_P-littoralis_Contig1264.15.1|Name=mRNA_P-littoralis_Contig1264.15.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=103bp
MMQEKVSEILRTVMVDKALELQAEIDQLVKFELHDPSGGPKTNSPAQAPK
KGRHTNKRGGGATGSAPPTTGNPEGRLENSRRNTRMRYSWGPGSGKRIKT
KK*
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