mRNA_P-littoralis_Contig126.108.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig126.108.1 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 177 bits (450), Expect = 4.720e-48 Identity = 80/111 (72.07%), Postives = 100/111 (90.09%), Query Frame = 1
Query: 94 LFFHGNFGRSEYARKKGLDKKAGHITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRPRDTPRYVNPRH 426
+++ GNFGRSEYAR+ GLDK+AG+I+SADDSKLEEL++++RFF+KWR +L+EKTT+GD TWKKHFITE+SWTDIRV ILGFVSMCRYLFE+DSRFKVS R P ++N R+
Sbjct: 546 MWWSGNFGRSEYARRNGLDKEAGYISSADDSKLEELINMVRFFDKWRSSLQEKTTMGDETWKKHFITEFSWTDIRVCILGFVSMCRYLFEEDSRFKVSPRRPWPHFINQRN 656
BLAST of mRNA_P-littoralis_Contig126.108.1 vs. uniprot
Match: A0A6H5JTX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX6_9PHAE) HSP 1 Score: 151 bits (381), Expect = 5.810e-42 Identity = 72/106 (67.92%), Postives = 84/106 (79.25%), Query Frame = 1
Query: 106 GNFGRSEYARKKGLDKKAGHITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRPRDTPRYVNPR 423
GNFGRS+YARK GLDK G+ SADDSKLE LMDILRFF++WR +LE + T+GD WK HFIT++SWTDIRV ILG VSMCRYLFE DSRFK+ D P ++N R
Sbjct: 37 GNFGRSDYARKNGLDKMVGYTGSADDSKLEGLMDILRFFDEWRASLEARPTLGD--WKAHFITDHSWTDIRVCILGTVSMCRYLFEKDSRFKIYPLSDVPHFINLR 140
BLAST of mRNA_P-littoralis_Contig126.108.1 vs. uniprot
Match: A0A6H5JRH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH8_9PHAE) HSP 1 Score: 149 bits (376), Expect = 8.530e-38 Identity = 69/111 (62.16%), Postives = 85/111 (76.58%), Query Frame = 1
Query: 109 NFGRSEYARKKGLDKKAGHITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRPRDTPRYVNPRHHCQVS 441
NFGRS+YARK GLDK +I SADDSKLEE+MDIL F++WR +LE + T+GD WK HFIT++SWTDIRV ILG VSMCRY+FE+DS FK+ D P ++N R+ Q S
Sbjct: 428 NFGRSDYARKNGLDKMVSYIRSADDSKLEEVMDILLLFDEWRASLEARPTLGDGAWKAHFITDHSWTDIRVCILGTVSMCRYVFEEDSTFKIPPLSDVPHFINLRYIGQAS 538
BLAST of mRNA_P-littoralis_Contig126.108.1 vs. uniprot
Match: A0A6H5KH17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH17_9PHAE) HSP 1 Score: 119 bits (297), Expect = 1.720e-30 Identity = 55/78 (70.51%), Postives = 65/78 (83.33%), Query Frame = 1
Query: 106 GNFGRSEYARKKGLDKKAGHITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFV 339
GNFGRS+YARK GLDK G+I SADDSKLEELMDILRFF++WR +LE + T+G WK +FIT++SWTDIRV ILG V
Sbjct: 24 GNFGRSDYARKNGLDKMVGYIRSADDSKLEELMDILRFFDEWRASLEARPTLGGRAWKAYFITDHSWTDIRVCILGTV 101
BLAST of mRNA_P-littoralis_Contig126.108.1 vs. uniprot
Match: A0A6H5K5I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I6_9PHAE) HSP 1 Score: 114 bits (286), Expect = 2.200e-27 Identity = 60/125 (48.00%), Postives = 82/125 (65.60%), Query Frame = 1
Query: 91 VLFFHGNFGRSEYARKKGLDKKAGHITSADDSKLEELMDILRFFEKWRCNLEEK---TTVGD-VTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKV-SRPRDTPRYVNPRHHCQVSCAH 450
V F+GN+GRS+ RK G K G I S + + ++ L++IL FF+ W+ LE K + GD + WKKHFIT SW D+R+SILGFVSMCRYLFED RF++ S + R+++PR+ Q C H
Sbjct: 60 VDIFNGNYGRSKVDRKDGSKKMVGCIRSFESAPMDRLLEILEFFDDWQSTLERKHIPSGEGDKLGWKKHFITHQSWFDLRLSILGFVSMCRYLFEDPERFQIDSLSPNCRRFLSPRNCSQDICEH 184
BLAST of mRNA_P-littoralis_Contig126.108.1 vs. uniprot
Match: A0A6H5JZW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZW9_9PHAE) HSP 1 Score: 109 bits (273), Expect = 2.870e-27 Identity = 50/76 (65.79%), Postives = 60/76 (78.95%), Query Frame = 1
Query: 160 GHITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVS 387
G+I S DDSKL+ELMDIL FF++WR +LE + T+GD WK HFIT++ WTD RV ILG V MCRYL E DSRFK+S
Sbjct: 3 GYIRSTDDSKLDELMDILWFFDEWRASLEARPTLGDGAWKAHFITDHLWTDSRVCILGTVRMCRYLIEKDSRFKIS 78
BLAST of mRNA_P-littoralis_Contig126.108.1 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 1.250e-19 Identity = 44/89 (49.44%), Postives = 63/89 (70.79%), Query Frame = 1
Query: 103 HGNFGRSEYARKKGLDKKAGHITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDD 369
+G +G +E RK+G +K+ G+IT AD L L++IL FF+ W+ +LE G W HFIT+YSWTD+R +ILGFV+MCRY+F+D+
Sbjct: 473 NGVYGLNEVERKQGGNKRKGYITGADSPLLGRLLEILEFFDSWQVSLEAH--FGPKEWANHFITDYSWTDMRTTILGFVAMCRYVFKDE 559
BLAST of mRNA_P-littoralis_Contig126.108.1 vs. uniprot
Match: A0A6H5JNK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNK0_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 4.600e-18 Identity = 40/61 (65.57%), Postives = 51/61 (83.61%), Query Frame = 1
Query: 160 GHITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVS 342
G+I SAD SKLE LMDILRFF++WR +LE + T+GD TW+ HFIT++SWTDI+V ILG V+
Sbjct: 3 GYIRSADRSKLE-LMDILRFFDEWRASLEARPTLGDGTWEAHFITDHSWTDIQVCILGTVA 62
BLAST of mRNA_P-littoralis_Contig126.108.1 vs. uniprot
Match: A0A6H5K095_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K095_9PHAE) HSP 1 Score: 73.9 bits (180), Expect = 3.400e-14 Identity = 33/49 (67.35%), Postives = 41/49 (83.67%), Query Frame = 1
Query: 157 AGHITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYS 303
AG+I SADDSKLEELMDILRF +WR +LE ++T+GD WK HFIT++S
Sbjct: 2 AGYIRSADDSKLEELMDILRFLGEWRASLEARSTLGDCAWKAHFITDHS 50
BLAST of mRNA_P-littoralis_Contig126.108.1 vs. uniprot
Match: A0A6H5K071_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K071_9PHAE) HSP 1 Score: 55.8 bits (133), Expect = 1.580e-5 Identity = 30/86 (34.88%), Postives = 48/86 (55.81%), Query Frame = 1
Query: 112 FGRSEYARKKGLDKKAGHITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDD 369
+ R K +D + ITS D L+ L++IL +F+ W +L D+ F+ + +W D+R++ILGFV+M RY+F DD
Sbjct: 493 YNRDPIDVSKRIDIRKSCITSKDSPLLDRLLEILEWFDTWWQDLN-LFGGSDLALDDLFLPDQTWDDLRLTILGFVAMTRYVFGDD 577 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig126.108.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig126.108.1 >prot_P-littoralis_Contig126.108.1 ID=prot_P-littoralis_Contig126.108.1|Name=mRNA_P-littoralis_Contig126.108.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=157bp TKHATTATPTSDLPAVRATISTRETLCQGRVLFFHGNFGRSEYARKKGLDback to top mRNA from alignment at P-littoralis_Contig126:498421..501751+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig126.108.1 ID=mRNA_P-littoralis_Contig126.108.1|Name=mRNA_P-littoralis_Contig126.108.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3331bp|location=Sequence derived from alignment at P-littoralis_Contig126:498421..501751+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig126:498421..501751+ >mRNA_P-littoralis_Contig126.108.1 ID=mRNA_P-littoralis_Contig126.108.1|Name=mRNA_P-littoralis_Contig126.108.1|organism=Pylaiella littoralis U1_48|type=CDS|length=471bp|location=Sequence derived from alignment at P-littoralis_Contig126:498421..501751+ (Pylaiella littoralis U1_48)back to top |