mRNA_P-littoralis_Contig125.114.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig125.114.1 vs. uniprot
Match: D8LFS1_ECTSI (DUF1279 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFS1_ECTSI) HSP 1 Score: 189 bits (480), Expect = 2.370e-51 Identity = 129/249 (51.81%), Postives = 158/249 (63.45%), Query Frame = 1
Query: 103 IMICNSLRASARAGCCRRVSSYLDSSSAGRLQKLRFASTTT------PQECRRTHDRSTGGSSNLAANTRQL-----PISLSKDQGIGNGTHRTGVSSSTDEKDAXXXXXXXXXXXXXXXXPQQQTLADRWRVTRSKVSAEYLRRFLKKYGRVAVTFHISVFLATLGTCYSVVDYGGLDIPALVKDFPLLADNLPPASAGNLAIAYGMTSAVGPPRAVLTITLTPRIARFFSGREASRLRDQ--GKTPP 810
+MI +S R SAR GC R + ++ R Q+ S T+ P RRT L+ + R + P +SK G G+ H + ++ XXXXXXXXXXXX + TLADRW+ RSKV+AEYL+ F+K+YGRVA TFH+SVFL TLGTCYS++DYGGLDI LVKD P+LADNLPPA AGNLAIAYGMTSA+GPPRAVLT+T+TPRIARF +GRE G TPP
Sbjct: 1 MMIYSSFRYSARVGCRRAMCPAALTTVGCRQQQPPGGSRTSAAFSNGPAAQRRT----------LSGSVRDIGMGSSPSFMSKHPGCGSSNHS--IHRGVEKDTPXXXXXXXXXXXXAAVASKAPTLADRWKAARSKVTAEYLKHFMKRYGRVAATFHMSVFLGTLGTCYSLIDYGGLDIAELVKDVPILADNLPPAGAGNLAIAYGMTSAIGPPRAVLTVTVTPRIARFLAGREEXXXXXXXGGTTPP 237
BLAST of mRNA_P-littoralis_Contig125.114.1 vs. uniprot
Match: A0A8K1CBQ9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBQ9_PYTOL) HSP 1 Score: 70.1 bits (170), Expect = 7.280e-11 Identity = 38/105 (36.19%), Postives = 58/105 (55.24%), Query Frame = 1
Query: 496 LRRFLKKYGRVAVTFHISVFLATLGTCYSVVDYGGLDIPALVKDFPLLADNLPPASAGNLAIAYGMTSAVGPPRAVLTITLTPRIARFFSGREASRLRDQGKTPP 810
++ LK YGR A+ FH S+F+ATL Y + YG +DI + P + + +A +L +AY T A GP R LTI ++P +AR+ + R + +R K P
Sbjct: 5 VKHVLKTYGRTALLFHSSLFVATLSGAYGAIRYG-VDIEKFLDKIPFVDLSKADPNASSLMLAYVSTLATGPARGALTIGVSPVLARWLAKRSTTMIRASQKKSP 108
BLAST of mRNA_P-littoralis_Contig125.114.1 vs. uniprot
Match: A0A024TND5_9STRA (DUF1279 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TND5_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 7.530e-9 Identity = 41/91 (45.05%), Postives = 54/91 (59.34%), Query Frame = 1
Query: 490 EYLRRFLKKYGRVAVTFHISVFLATLGTCYSVVDYGGLDIPALVKDFPLLADNLPPASAGNLAIAYGMTSAVGPPRAVLTITLTPRIARFF 762
E L++ K+YG+VAV FH +VFLATLG+ Y+ + G +DI + F L D P AG+ +AY T A GP R +TI TP IAR
Sbjct: 18 EKLKQVTKEYGQVAVVFHSTVFLATLGSAYASIRMG-VDIRHVKVPFINLEDINP--DAGSFLLAYLATLATGPLRGGITIVSTPWIARML 105
BLAST of mRNA_P-littoralis_Contig125.114.1 vs. uniprot
Match: A7SLH1_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SLH1_NEMVE) HSP 1 Score: 65.1 bits (157), Expect = 2.030e-8 Identity = 37/91 (40.66%), Postives = 50/91 (54.95%), Query Frame = 1
Query: 487 AEYLRRFLKKYGRVAVTFHISVFLATLGTCYSVVDYGGLDIPALVKDFPL---LADNLPPASAGNLAIAYGMTSAVGPPRAVLTITLTPRI 750
A+ LR+ +YG +AV FH+S+ L +LG CY+ V GLD+P L++ L L+D+ A IAY P R LTIT TP I
Sbjct: 71 AQRLRKIFAEYGSIAVVFHVSISLTSLGICYTAVS-SGLDVPGLLQSVGLSKGLSDSALTTGASTFVIAYACHKVFVPVRMFLTITCTPLI 160
BLAST of mRNA_P-littoralis_Contig125.114.1 vs. uniprot
Match: W4GND2_9STRA (DUF1279 domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GND2_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 2.980e-8 Identity = 40/91 (43.96%), Postives = 55/91 (60.44%), Query Frame = 1
Query: 490 EYLRRFLKKYGRVAVTFHISVFLATLGTCYSVVDYGGLDIPALVKDFPLLADNLPPASAGNLAIAYGMTSAVGPPRAVLTITLTPRIARFF 762
E L++ K+YG+VAV FH SVF+ATLG+ Y+ + G +DI + F L D P AG+ +AY +T A GP R +T+ TP IAR
Sbjct: 72 EKLKQVTKEYGKVAVVFHSSVFVATLGSAYTSIRMG-VDIRHVKVPFVNLEDVDP--DAGSFFLAYLVTLATGPLRGGITVISTPWIARLL 159
BLAST of mRNA_P-littoralis_Contig125.114.1 vs. uniprot
Match: A0A6G0WVK7_9STRA (DUF1279 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WVK7_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 2.110e-6 Identity = 38/88 (43.18%), Postives = 51/88 (57.95%), Query Frame = 1
Query: 508 LKKYGRVAVTFHISVFLATLGTCYSVVDYGGLDIPALVKDFPLLADNLPPASAGNLAIAYGMTSAVGPPRAVLTITLTPRIARFFSGR 771
LK+YG++AV FH SV++AT G Y+ V G LD+ L D P AS +L +AY +T+A GP R TI ++P IAR R
Sbjct: 51 LKEYGKIAVVFHSSVWVATFGASYTCVRMG-LDVRHFKIPLINLEDIDPDAS--SLILAYLVTTATGPLRGGATIVMSPWIARMLRKR 135
BLAST of mRNA_P-littoralis_Contig125.114.1 vs. uniprot
Match: A0A182MD47_9DIPT (DUF1279 domain-containing protein n=1 Tax=Anopheles culicifacies TaxID=139723 RepID=A0A182MD47_9DIPT) HSP 1 Score: 61.2 bits (147), Expect = 4.440e-6 Identity = 34/93 (36.56%), Postives = 50/93 (53.76%), Query Frame = 1
Query: 496 LRRFLKKYGRVAVTFHISVFLATLGTCYSVVDYGGLDIPALVKDF----PLLADNLPPASAGNLAIAYGMTSAVGPPRAVLTITLTPRIARFF 762
L++ +K+YG + FH+S+ LA+LGTCY +V G+D+ AL+ LA A AG IAY + P R +T+ TP I R+
Sbjct: 300 LKKAIKEYGSTVLVFHVSISLASLGTCYLLVS-SGIDMVALLDRMGWGDSALASKAGAAGAGTFVIAYAIHKVFAPVRISITLGATPLIVRYL 391
BLAST of mRNA_P-littoralis_Contig125.114.1 vs. uniprot
Match: UPI00096AF53D (protein FAM210B-like n=1 Tax=Aethina tumida TaxID=116153 RepID=UPI00096AF53D) HSP 1 Score: 57.8 bits (138), Expect = 8.350e-6 Identity = 31/96 (32.29%), Postives = 53/96 (55.21%), Query Frame = 1
Query: 484 SAEYLRRFLKKYGRVAVTFHISVFLATLGTCYSVVDYGGLDIPALVKDFPLLADNLPPA---SAGNLAIAYGMTSAVGPPRAVLTITLTPRIARFF 762
+A+ L++ + YG + FHIS+ LA+LGTCY +V GLD+ ++K + ++ A +AG A+AY + P R +T+T P + +
Sbjct: 84 TAQKLKKAVTDYGTTVIVFHISISLASLGTCYFLV-LNGLDVVEVMKFVGVNEESSTHAMICNAGTFAVAYALHKVFAPVRLTITLTTVPFLVNYL 178
BLAST of mRNA_P-littoralis_Contig125.114.1 vs. uniprot
Match: A0A182SQU9_9DIPT (DUF1279 domain-containing protein n=1 Tax=Anopheles maculatus TaxID=74869 RepID=A0A182SQU9_9DIPT) HSP 1 Score: 57.0 bits (136), Expect = 7.200e-5 Identity = 33/93 (35.48%), Postives = 51/93 (54.84%), Query Frame = 1
Query: 496 LRRFLKKYGRVAVTFHISVFLATLGTCYSVVDYGGLDIPALVKDF----PLLADNLPPASAGNLAIAYGMTSAVGPPRAVLTITLTPRIARFF 762
L++ +K+YG + FH+S+ LA+LGTCY +V G+D+ +L++ LA A AG IAY + P R +T+ TP I R+
Sbjct: 226 LKKAIKEYGSTVLVFHVSISLASLGTCYLLVS-SGIDMVSLLERMGWGDSALASRAG-AGAGTFVIAYAIHKVFAPVRISITLGATPLIVRYL 316
BLAST of mRNA_P-littoralis_Contig125.114.1 vs. uniprot
Match: A0A1S4GY95_ANOGA (DUF1279 domain-containing protein n=9 Tax=Pyretophorus TaxID=44537 RepID=A0A1S4GY95_ANOGA) HSP 1 Score: 57.0 bits (136), Expect = 7.640e-5 Identity = 33/93 (35.48%), Postives = 51/93 (54.84%), Query Frame = 1
Query: 496 LRRFLKKYGRVAVTFHISVFLATLGTCYSVVDYGGLDIPALVKDF----PLLADNLPPASAGNLAIAYGMTSAVGPPRAVLTITLTPRIARFF 762
L++ +K+YG + FH+S+ LA+LGTCY +V G+D+ +L++ LA A AG IAY + P R +T+ TP I R+
Sbjct: 236 LKKAIKEYGSTVLVFHVSISLASLGTCYLLVS-SGIDMVSLLERMGWGDSALASKAG-AGAGTFVIAYAIHKVFAPVRISITLGATPLIVRYL 326 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig125.114.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig125.114.1 >prot_P-littoralis_Contig125.114.1 ID=prot_P-littoralis_Contig125.114.1|Name=mRNA_P-littoralis_Contig125.114.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=237bp MICNSLRASARAGCCRRVSSYLDSSSAGRLQKLRFASTTTPQECRRTHDRback to top mRNA from alignment at P-littoralis_Contig125:394967..398547- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig125.114.1 ID=mRNA_P-littoralis_Contig125.114.1|Name=mRNA_P-littoralis_Contig125.114.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3581bp|location=Sequence derived from alignment at P-littoralis_Contig125:394967..398547- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig125:394967..398547- >mRNA_P-littoralis_Contig125.114.1 ID=mRNA_P-littoralis_Contig125.114.1|Name=mRNA_P-littoralis_Contig125.114.1|organism=Pylaiella littoralis U1_48|type=CDS|length=711bp|location=Sequence derived from alignment at P-littoralis_Contig125:394967..398547- (Pylaiella littoralis U1_48)back to top |