mRNA_P-littoralis_Contig125.93.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig125.93.1 vs. uniprot
Match: A0A6H5KFB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFB9_9PHAE) HSP 1 Score: 278 bits (712), Expect = 1.930e-80 Identity = 167/373 (44.77%), Postives = 222/373 (59.52%), Query Frame = 1
Query: 514 KRVADFSAELTRAEITENTLALVDGTFFLGEESLGCKLFIRPSYKKLSELILDGGSEGTLPQFVVTGTPGIGKSVFGLYLLSLLRCRGKTVVFERKSFWFRFSDEGVDEGDYSSFKNAGYLHDENTWYLSDPEEKPEELLRLATVVMVSPTYERTKEFLKLRDSEQVFMPVWELDELFECREAVFPHVPRADVAEYFRVVGGVPRAVFNDKKFVLAKRGLEYTADKVHTGQLPWVDFFSKWQ-HHFQPDEIGDELFHIFSDSSDDFKTCTVSLASDYARDLVFQKVTESGKNNLLAVVRVALENPSV-TRLLGEDAVDAMFKEGAHQSIGGVAK*Q---LSTVGSGVSS*ESFLS-----FGFEKGE*FVGNN 1602
K +ADF A LT+A + +NTL L DGTFFLGE L KLFIRP YK LSELIL+G ++GT+ + VVTGTPGIGKS FG YL+ LLR +G TVV ERK WFRFSDEGV G + SF+ AGYL+ +TWYLSDPE++P+ELL L TVV++SP R EF+K S + +MP W LDELF CR+AVFPHVP DV E F VGGV RAVF+ +K ++ A + L + S+ D GD L H+ F+ +V AS++A + ++ + L + V A + + ++ E A A F+ AH++IGG ++ Q + + SS +S L F K + F GN+
Sbjct: 38 KALADFGAVLTKAVVADNTLELADGTFFLGEPRLRSKLFIRPCYKDLSELILEGVTDGTMDKIVVTGTPGIGKSEFGFYLMYLLRGQGNTVVLERKDSWFRFSDEGVTVGYFYSFRRAGYLYGNSTWYLSDPEDRPKELLGLPTVVLLSPRKSRVNEFMKQPGSRRFYMPPWCLDELFRCRQAVFPHVPETDVRERFSKVGGVARAVFDAEKLKQVCLKMQAAASNMDLNLLQQILSRSRDDVDQVSTDRSGDALLHLLPIPETGFEEFSVDFASEFAHIVTLGELPKKEFAPLASFVGAAFAHDELGDKVTAERA--AGFETIAHKTIGGASEQQWFDMRILSRASSSTKSVLEGNRLRLSFVKEQSFEGNS 408
BLAST of mRNA_P-littoralis_Contig125.93.1 vs. uniprot
Match: A0A6H5KCR9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCR9_9PHAE) HSP 1 Score: 145 bits (367), Expect = 3.870e-37 Identity = 74/114 (64.91%), Postives = 86/114 (75.44%), Query Frame = 1
Query: 514 KRVADFSAELTRAEITENTLALVDGTFFLGEESLGCKLFIRPSYKKLSELILDGGSEGTLPQFVVTGTPGIGKSVFGLYLLSLLRCRGKTVVFERKSFWFRFSDEGVDEGDYSS 855
K +ADF A LT+A + +NTL L DGTFFLGE L KLFIRP YK LSELIL+G ++GT+ + VVTGTPGIGKS FG YL+ LLR +G TVV ERK WFRFSD GV GD+ S
Sbjct: 19 KALADFGAVLTKAVVADNTLELADGTFFLGEPRLRSKLFIRPCYKDLSELILEGVTDGTMDKIVVTGTPGIGKSEFGFYLMYLLRGQGNTVVLERKGCWFRFSDGGVTVGDFYS 132
BLAST of mRNA_P-littoralis_Contig125.93.1 vs. uniprot
Match: A0A250X9Q7_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X9Q7_9CHLO) HSP 1 Score: 121 bits (304), Expect = 4.310e-25 Identity = 95/299 (31.77%), Postives = 150/299 (50.17%), Query Frame = 1
Query: 478 PTADSVSSTSADKRVADFSAELTRAEITENTLALVDGTFFLGEESLGCKLFIRPSYKKLSELILDGGSEGTLPQFVVTGTPGIGKSVFGLYLLS-LLRCRG-KTVVFERKSFWFRFS-DEGVDEGDYSSFKNAGYLHDENTWYLSDPEEKPEELLRLATVVMVSPTYERTKEFLKLRDSEQVFMPVWELDELFECREAVFPHVPRADVAEYFRVVGGVPRAVFNDKKFVLAKRGLEYTADKVHTGQLPWVDFFSKWQHHFQPDEIGDELFHIFSDSSDDFKTCTVSLASDYA-RDLVFQ 1362
P + S S A ++V +F L +A + L L G FLG G ++ +R SY+ + + I + +G L +F++TGTPGIGKS F L+ LL+ +G K +V E + + F E V G +F+ G L DE TW++ D + E TV++ SP+ ER KEFLKL ++MPVW ++E+ +CR ++ H+ VA+ + GG+PR V V A+ LE + Q WVD S E+ ++ H + +++AS Y R+L+ +
Sbjct: 92 PYSASSSLLKARQQVQEFWISLQKACVKNGFLRLRKGDSFLGSPMKGHRILMRESYESILQRIDELLDQG-LRRFLITGTPGIGKSFFMFPLMHWLLQKKGVKRIVLEIEDLRYYFCVGESVISGGPQAFE--GVLGDEETWWIMDKAKGRER--EAYTVLLSSPSQERCKEFLKLMGCTCLYMPVWSIEEIEKCRTVIYSHLTAGAVADLYEKWGGIPRFVLEKANDVPAQEMLENSIK-----QCSWVDVMSCVYSPETAKEVSHKVLHRHVKPDSGCQKYFMAMASPYVERELLIR 380
BLAST of mRNA_P-littoralis_Contig125.93.1 vs. uniprot
Match: A0A250XA00_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XA00_9CHLO) HSP 1 Score: 117 bits (294), Expect = 1.850e-24 Identity = 95/342 (27.78%), Postives = 161/342 (47.08%), Query Frame = 1
Query: 481 TADSVSSTSADKRVADFSAELTRAEITENTLALVDGTFFLGEESLGCKLFIRPSYKKLSELILDGGSEGTLPQFVVTGTPGIGKSVFGLYLLS--LLRCRGKTVVFERKSFWFRFS-DEGVDEGDYSSFKNAGYLHDENTWYLSDPEEKPEELLRLATVVMVSPTYERTKEFLKLRDSEQVFMPVWELDELFECREAVFPHVPRADVAEYFRVVGGVPRAVFNDKKFVLAKRGLEYTADKVHTGQLPWVDFFSKWQHHFQPDEIGDELFHIFSDSSDDFKTCTVSLASDYARDLVFQKVTESGKNNLLAVVRVALENPSVTRLLGEDAVDAMFKEG-AHQSI 1494
++ V + A ++V +F L +A + + L L G +FLG G ++ +R SY+ + + I + +G L +F++TGTPGIGKS F L+ LL+ K +V E + + F E V G +F+ G L DE TW++ D + E TV++ SP+ ER KEFLKL +FMPVW +E+ +CR +F H+ V++ + GGVPR V + ++ LE + W+D + + H+ + +++AS Y + + + E+ + L + +P + G +F E AH+S+
Sbjct: 94 SSGDVGAAEARQQVQEFWISLQKACVKDGFLQLRKGDYFLGSPMKGHRILMRESYESILQRIDELLDKG-LRRFLITGTPGIGKSFFMFPLMHWLLLKKGVKRIVLEIEDLRYYFCVGESVISGGAQAFE--GVLGDEETWWIVDKAKGRER--EAYTVLLSSPSQERCKEFLKLMGCTTLFMPVWSKEEIEKCRVQLFSHLNAEAVSDLYEKWGGVPRFVLEKANDIPSQHQLEGSIRGCS-----WMDLMTCTCSTSDAKDASHMALHLHVKPDSGCQKYFMAIASSYVKSELVRMGHETSSSQLENYFEWCMSSPVTREMAG------IFSEALAHKSL 419
BLAST of mRNA_P-littoralis_Contig125.93.1 vs. uniprot
Match: A0A8J4BV52_9CHLO (Uncharacterized protein n=5 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BV52_9CHLO) HSP 1 Score: 119 bits (299), Expect = 2.130e-24 Identity = 97/334 (29.04%), Postives = 158/334 (47.31%), Query Frame = 1
Query: 529 FSAELTRAEIT-ENTLALVDGTFFLGEESLGCKLFIRPSYKKLSELILD-GGSEGTLPQFVVTGTPGIGKSVFGLYLLSLLRCRGK--TVVFE----RKSFWFRFSDEGVDEGDYSSFKNAGYLHDENTWYLSDPEEKPEELLRLATVVMVSPTYERTKEFLKLRDSEQVFMPVWELDELFECREAVFPHVPRADVAEYFRVVGGVPRAVFNDKKFVLAKRGLEYTADKVHTGQLPWVDFFSKWQHHFQPDEIGDELFHIFSDSSDDFKTCTVSLASDYARDLVFQKVTESGKN----NLLAVVRVALENPSVTRLLGEDAVDAMFKEGAHQSI 1494
F L R +IT ++ L L + F LG ++ G L++RP Y+ + + +++ S T+ QF++TGTPGIGKS F + L+ L K ++VF+ R F F+ +D V EG+ FK+ + D+ W++ D ++ + V++ SP +R +F+KL S ++MPVW DE+ +CR ++PH+ A V E G VPR V A+ L+ + W D + +L H+ SD + TV AS Y V QK+ E+G +L +V +++ P G F+ AH +
Sbjct: 128 FWQALLRLDITVDSFLNLPENVFLLGRQTWGSSLYVRPCYRGIFDQMMELYSSPYTINQFLITGTPGIGKSFFAIVLMGWLVMEKKVTSIVFDYYETRYLFMFKGTDVDVVEGNKMDFKDV--IDDDTAWWILDMDDPVIDDRDANIVLLSSPDLKRYNKFVKLPSSTTLYMPVWTDDEIEKCRMQLYPHLSEARVEELVWKWGNVPRYVLKKADIAQAQTSLD-----IAITHCRWEDVIACIGGADTAPHASHKLLHL-EVVSDKYDKVTVKPASPY----VVQKIEENGGKYHVKHLQKLVHLSIGMPMYAAAAG-----VFFESYAHHRL 444
BLAST of mRNA_P-littoralis_Contig125.93.1 vs. uniprot
Match: A0A8J4BSP2_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BSP2_9CHLO) HSP 1 Score: 119 bits (297), Expect = 2.840e-24 Identity = 97/334 (29.04%), Postives = 157/334 (47.01%), Query Frame = 1
Query: 529 FSAELTRAEIT-ENTLALVDGTFFLGEESLGCKLFIRPSYKKLSELILD-GGSEGTLPQFVVTGTPGIGKSVFGLYLLSLLRCRGK--TVVFE----RKSFWFRFSDEGVDEGDYSSFKNAGYLHDENTWYLSDPEEKPEELLRLATVVMVSPTYERTKEFLKLRDSEQVFMPVWELDELFECREAVFPHVPRADVAEYFRVVGGVPRAVFNDKKFVLAKRGLEYTADKVHTGQLPWVDFFSKWQHHFQPDEIGDELFHIFSDSSDDFKTCTVSLASDYARDLVFQKVTESGKN----NLLAVVRVALENPSVTRLLGEDAVDAMFKEGAHQSI 1494
F L R +IT ++ L L + F LG + G L++RP Y+ + + +++ S T+ QF++TGTPGIGKS F + L+ L K ++VF+ R F F+ +D V EG+ FK+ + D+ W++ D ++ + V++ SP +R +F+KL S ++MPVW DE+ +CR ++PH+ A V E G VPR V A+ L+ + W D + +L H+ SD + TV AS Y V QK+ E+G +L +V +++ P G F+ AH +
Sbjct: 90 FWQALLRLDITVDSFLNLPENVFLLGRKRWGSSLYVRPCYRGIFDQMMELCSSPDTINQFLITGTPGIGKSFFAIVLMGWLVMEKKVTSIVFDYYETRYLFMFKGTDVDVVEGNKMDFKDV--IDDDTAWWILDMDDPVIDDRDANIVLLSSPDLKRYNKFVKLPSSTTLYMPVWTDDEIEKCRMQLYPHLSEARVEELVWKWGNVPRYVLKKADIAQAQTSLDNSITHCR-----WKDVIACIGGPDTAPHASHKLLHL-EVVSDKYDKVTVKPASPY----VVQKIEENGGKYHVKHLQKLVHLSIGMPMYAAAAG-----VFFESYAHHRL 406
BLAST of mRNA_P-littoralis_Contig125.93.1 vs. uniprot
Match: A0A8J4BMK6_9CHLO (Uncharacterized protein n=7 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BMK6_9CHLO) HSP 1 Score: 119 bits (297), Expect = 3.630e-24 Identity = 98/335 (29.25%), Postives = 162/335 (48.36%), Query Frame = 1
Query: 529 FSAELTRAEIT-ENTLALVDGTFFLGEESLGCKLFIRPSYKKLSELILD-GGSEGTLPQFVVTGTPGIGKSVFGLYLLSLLRCRGK--TVVFE----RKSFWFRFSDEGVDEGDYSSFKNAGYLHDENTWYLSDPEEKPEELLRLATVVMVS-PTYERTKEFLKLRDSEQVFMPVWELDELFECREAVFPHVPRADVAEYFRVVGGVPRAVFNDKKFVLAKRGLEYTADKVHTGQLPWVDFFSKWQHHFQPDEIGDELFHIFSDSSDDFKTCTVSLASDYARDLVFQKVTESGKN----NLLAVVRVALENPSVTRLLGEDAVDAMFKEGAHQSI 1494
F L R +IT ++ L L + F LG ++ G L++RP Y+ + + +++ S T+ QF++TGTPGIG+S F + L+ L K ++VF+ R F F+ +D V EG+ FK+ + D+ W++ D + ++ R A +V++S P +R +F+KL S ++MPVW DE+ +CR ++PH+ A V E G VPR V A+ L+ + W D + +L H+ SD + TV AS Y V QK+ E+G +L +V +++ P G F+ AH+ +
Sbjct: 123 FWQALLRLDITVDSFLNLPENVFLLGRQTWGSSLYVRPCYRGIFDQMMELYSSPWTIKQFLITGTPGIGRSFFAIVLMGWLVMEKKVTSIVFDSYETRYLFMFKGTDVDVVEGNKMDFKDV--IDDDTAWWILDTDNFLDD--RDANIVLLSSPDLKRYNKFVKLPSSTTLYMPVWTDDEIEKCRMQLYPHLSEARVEELVWKWGNVPRYVLKKADIAQAQTSLD-----IAITHCRWKDVIACIGGPDTAPHASHKLLHL-EVVSDKYDKVTVKPASPY----VVQKIEENGGKYHVKHLQKLVHLSIGMPMYAAAAG-----VFFESYAHRRL 438
BLAST of mRNA_P-littoralis_Contig125.93.1 vs. uniprot
Match: A0A8J4BFR7_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BFR7_9CHLO) HSP 1 Score: 117 bits (294), Expect = 7.010e-24 Identity = 99/335 (29.55%), Postives = 161/335 (48.06%), Query Frame = 1
Query: 529 FSAELTRAEIT-ENTLALVDGTFFLGEESLGCKLFIRPSYKKLSELILD-GGSEGTLPQFVVTGTPGIGKSVFGLYLLSLLRCRGK--TVVFE----RKSFWFRFSDEGVDEGDYSSFKNAGYLHDENTWYLSDPEEKPEELLRLATVVMVS-PTYERTKEFLKLRDSEQVFMPVWELDELFECREAVFPHVPRADVAEYFRVVGGVPRAVFNDKKFVLAKRGLEYTADKVHTGQLPWVDFFSKWQHHFQPDEIGDELFHIFSDSSDDFKTCTVSLASDYARDLVFQKVTESGKN----NLLAVVRVALENPSVTRLLGEDAVDAMFKEGAHQSI 1494
F L R +IT ++ L L + F LG + G L++RP Y+ + + +++ S T+ QF++TGTPGIGKS F + L+ L K ++VF+ R F F+ +D V EG+ FK+ + D+ W++ D + ++ R A +V++S P +R +F+KL S ++MPVW DE+ +CR ++PH+ A V E G VPR V A+ L+ + W D + +L H+ SD + TV AS Y V QK+ E+G +L +V +++ P G F+ AH+ +
Sbjct: 96 FWQALLRLDITVDSFLNLPENVFLLGRKRWGSSLYVRPCYRGIFDQMMELCSSPYTINQFLITGTPGIGKSFFAIVLMGWLVMEKKVTSIVFDYYETRYLFMFKGTDVDVVEGNKMDFKDV--IDDDTAWWILDTDNFLDD--RDANIVLLSSPDLKRYNKFVKLPSSTTLYMPVWTDDEIEKCRMQLYPHLSEARVEELVWKWGNVPRYVLKKADIAQAQTSLDNSITHCR-----WKDVIACIGGPDTAPHASHKLLHL-EVVSDKYDKVTVKPASPY----VVQKIEENGGKYHVKHLQKLVHLSIGMPMYAAAAG-----VFFESYAHRRL 411
BLAST of mRNA_P-littoralis_Contig125.93.1 vs. uniprot
Match: A0A8J4FDT6_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4FDT6_9CHLO) HSP 1 Score: 117 bits (293), Expect = 9.350e-24 Identity = 95/334 (28.44%), Postives = 158/334 (47.31%), Query Frame = 1
Query: 529 FSAELTRAEIT-ENTLALVDGTFFLGEESLGCKLFIRPSYKKLSELILD-GGSEGTLPQFVVTGTPGIGKSVFGLYLLSLLRCRGK--TVVFE----RKSFWFRFSDEGVDEGDYSSFKNAGYLHDENTWYLSDPEEKPEELLRLATVVMVSPTYERTKEFLKLRDSEQVFMPVWELDELFECREAVFPHVPRADVAEYFRVVGGVPRAVFNDKKFVLAKRGLEYTADKVHTGQLPWVDFFSKWQHHFQPDEIGDELFHIFSDSSDDFKTCTVSLASDYARDLVFQKVTESGKN----NLLAVVRVALENPSVTRLLGEDAVDAMFKEGAHQSI 1494
F L R +IT ++ L L + F LG ++ G L++RP Y+ + + +++ S T+ QF++ GTPGIGKS F + L+ L K ++VF+ R F F+ +D V EG+ FK+ + D+ W++ D ++ + V++ SP +R +F+KL S ++MP+W DE+ +CR ++PH+ A V E G VPR V A+ L+ + W D + +L H+ SD + TV AS Y V QK+ E+G +L +V +++ P G F+ AH+ +
Sbjct: 95 FWQALLRLDITVDSFLNLPESVFLLGRKTWGSSLYVRPCYRGIFDQMMELYSSPYTINQFLIAGTPGIGKSFFAIVLMGWLVMEKKVTSIVFDSYETRYLFMFKGTDVDVVEGNKMDFKDV--IDDDTAWWILDMDDPVIDDRDANIVLLSSPDLKRYNKFVKLPSSTTLYMPIWTDDEIEKCRMQLYPHLSEARVEELVWKWGNVPRYVLKKADIAHAQTSLD-----IAITHCQWKDVIACIGGPDTAPHASHKLLHL-EVVSDKYDKVTVKPASPY----VVQKIEENGGKYHVKHLQKLVHLSIGMPMYAAAAG-----VFFESYAHRHL 411
BLAST of mRNA_P-littoralis_Contig125.93.1 vs. uniprot
Match: A0A8J4BGL0_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BGL0_9CHLO) HSP 1 Score: 111 bits (277), Expect = 5.440e-23 Identity = 76/222 (34.23%), Postives = 122/222 (54.95%), Query Frame = 1
Query: 529 FSAELTRAEIT-ENTLALVDGTFFLGEESLGCKLFIRPSYKKLSELILD-GGSEGTLPQFVVTGTPGIGKSVFGLYLLSLLRCRGK--TVVFE----RKSFWFRFSDEGVDEGDYSSFKNAGYLHDENTWYLSDPEEKPEELLRLATVVMVS-PTYERTKEFLKLRDSEQVFMPVWELDELFECREAVFPHVPRADVAEYFRVVGGVPRAVFNDKKFVLAKR 1167
F L R +IT ++ L L + F LG + G L++RP Y+ + + +++ S T+ QF++TGTPGIGKS F + L+ L K ++VF+ R F F+ +D V EG+ FK+ + D+ W++ D + ++ R A +V++S P +R +F+KL S ++MPVW DE+ +CR ++PH+ A V E G VPR V V+ R
Sbjct: 96 FWQALLRLDITVDSFLNLPENVFLLGRKRWGSSLYVRPCYRGIFDQMMELCSSPYTINQFLITGTPGIGKSFFAIVLMGWLVMEKKVTSIVFDYYETRYLFMFKGTDVDVVEGNKMDFKDV--IDDDTAWWILDTDNFLDD--RDANIVLLSSPDLKRYNKFVKLPSSTTLYMPVWTDDEIEKCRMQLYPHLSEARVEELVWKWGNVPRYVLKKVCVVVESR 313 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig125.93.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig125.93.1 >prot_P-littoralis_Contig125.93.1 ID=prot_P-littoralis_Contig125.93.1|Name=mRNA_P-littoralis_Contig125.93.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=473bp MAIRLLVLLLSCAAPLGVTFIPSSPVPPSPCPRFAISTFATCPVLVPGALback to top mRNA from alignment at P-littoralis_Contig125:351315..361092+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig125.93.1 ID=mRNA_P-littoralis_Contig125.93.1|Name=mRNA_P-littoralis_Contig125.93.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9778bp|location=Sequence derived from alignment at P-littoralis_Contig125:351315..361092+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig125:351315..361092+ >mRNA_P-littoralis_Contig125.93.1 ID=mRNA_P-littoralis_Contig125.93.1|Name=mRNA_P-littoralis_Contig125.93.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1419bp|location=Sequence derived from alignment at P-littoralis_Contig125:351315..361092+ (Pylaiella littoralis U1_48)back to top |