mRNA_P-littoralis_Contig1233.6.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1233.6.1
Unique NamemRNA_P-littoralis_Contig1233.6.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1233.6.1 vs. uniprot
Match: A0A6H5KWL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWL4_9PHAE)

HSP 1 Score: 603 bits (1555), Expect = 1.230e-208
Identity = 316/432 (73.15%), Postives = 343/432 (79.40%), Query Frame = 2
Query:    2 LKFEPALKNWLCGER-VFEGIVVKLSLDALPPAMRQIRCHPKPHLRVIPLWDGIGTGSFSSMEEAHDAWRSLSKSTKRNVWPEICEAESPSKLESLLRSLLFPEGSRVVCAVTGEHGGEGKSYCAFRAAKNIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSQVRKTAGSIRTLKADVIIIEEAAYMPLRTLSTILAAAHCSGTHVIGTYDTHQLQPVHENSGMSISRDNVDRKVVLEKAFPTCFHVFARKRDKTIQEQVEMDEQSLVHSGRRKR*T*SADSSHREVWR*ISR-------------------------------------GYWDALGRQTIVGAQYRDLGSLGKVHKNHSYSIIRSSADEVVVASAFDDGASLEETSLCRAQAEIVFDPPGSCTVHAVQGRTVEGRLIIHQ 1183
            LKFEPALKN LCGER VFEGIVVKLSLDALPPAMR+I C  KP L VIPLWDGIGT  FSSMEEAH AWR L K+TKRN+WPEICEAESPSKLE  LR +L  +GS +VCAVTGEHGG GKSYCAF AAKNIFKTGLVVTPTNSLRTSFT++PSGW+VKTADHQLGFYLG+DS V+KTAGSIRTLK DVIIIEEAAYMPLRTLS +LAAAH SGTHVIGTYDTHQLQPV E+SGMSISRDNV+RKV+LEKAFPTCFHVFARKRDKT+ EQVEMD+  L+H         + + SH    R I R                                     G WD LG +T+VGAQYRDLG+ GKVHKNH Y++IRSSA+ VVVASAFDDGASLEETSLCRA+AE VFDPPGSCTVHAVQGRTVEGRLIIHQ
Sbjct:  251 LKFEPALKNPLCGERRVFEGIVVKLSLDALPPAMRKIPCPLKPRLLVIPLWDGIGT-DFSSMEEAHSAWRRLGKNTKRNMWPEICEAESPSKLEIFLRGMLSRQGSSIVCAVTGEHGGAGKSYCAFNAAKNIFKTGLVVTPTNSLRTSFTNLPSGWNVKTADHQLGFYLGDDSHVKKTAGSIRTLKVDVIIIEEAAYMPLRTLSMVLAAAHSSGTHVIGTYDTHQLQPVCESSGMSISRDNVNRKVILEKAFPTCFHVFARKRDKTVDEQVEMDD-GLLHI------LAAGNDSHEAQTRAIERFGGGCLDDPSPSDFHLAYTRDCARFYAFRGLLGCNESGGWDVLGHKTVVGAQYRDLGNPGKVHKNHMYNVIRSSAETVVVASAFDDGASLEETSLCRAEAENVFDPPGSCTVHAVQGRTVEGRLIIHQ 674          
BLAST of mRNA_P-littoralis_Contig1233.6.1 vs. uniprot
Match: D7FV89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV89_ECTSI)

HSP 1 Score: 610 bits (1573), Expect = 3.100e-206
Identity = 320/427 (74.94%), Postives = 345/427 (80.80%), Query Frame = 2
Query:    2 LKFEPALKNWLCGER-VFEGIVVKLSLDALPPAMRQIRCHPKPHLRVIPLWDGIGTGSFSSMEEAHDAWRSLSKSTKRNVWPEICEAESPSKLESLLRSLLFPEGSRVVCAVTGEHGGEGKSYCAFRAAKNIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSQVRKTAGSIRTLKADVIIIEEAAYMPLRTLSTILAAAHCSGTHVIGTYDTHQLQPVHENSGMSISRDNVDRKVVLEKAFPTCFHVFARKRDKTIQEQVEMDEQSL--VHSGRRKR*T*-----------------SADSSHREVWR*ISR-------------GYWDALGRQTIVGAQYRDLGSLGKVHKNHSYSIIRSSADEVVVASAFDDGASLEETSLCRAQAEIVFDPPGSCTVHAVQGRTVEGRLIIHQ 1183
            LKFEPALKN LCGER VFEGI VKLSLD LPPAMRQI C PKPHL+VIPLW G+G G FSSM +AH+AW SL KSTKRN+WPEICEAESPSKLESLLR LL  + SRVVCAVTGEHGG GKSYCAFRAAK IFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDS++RKTAGSIRTLK DVIIIEEAAYMPLRTLS ILAAA CSGTHVIGTYDTHQLQPV E+SGMSIS DNVDRKV+LEKAFPTCFHVFARKRDKT +EQVEMD+  L  + +G   +                    S    H    R  +R             G WDALGR T++GAQYRDLG+LGK+HKNH+Y+I+RSSADE+VVASAFD   SLEETSLCRA AE +FDPPGSCTVHAVQGRTVEGRLIIHQ
Sbjct:  658 LKFEPALKNPLCGERRVFEGIEVKLSLDTLPPAMRQIPCPPKPHLQVIPLWGGVGAG-FSSMGDAHNAWCSLEKSTKRNLWPEICEAESPSKLESLLRGLLSQQASRVVCAVTGEHGGAGKSYCAFRAAKKIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSEMRKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAARCSGTHVIGTYDTHQLQPVCESSGMSISSDNVDRKVILEKAFPTCFHVFARKRDKTTEEQVEMDDGLLYILAAGNNSQEAQTRAIERFGRECPTGNDPSPSEFHLAYTRDCARFHAFRGLPGCNAPGGWDALGRTTVIGAQYRDLGNLGKIHKNHTYNIVRSSADEIVVASAFDCAVSLEETSLCRAVAENLFDPPGSCTVHAVQGRTVEGRLIIHQ 1083          
BLAST of mRNA_P-littoralis_Contig1233.6.1 vs. uniprot
Match: D7FQN9_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7FQN9_ECTSI)

HSP 1 Score: 595 bits (1533), Expect = 4.900e-200
Identity = 310/432 (71.76%), Postives = 342/432 (79.17%), Query Frame = 2
Query:    2 LKFEPALKNWLCGER-VFEGIVVKLSLDALPPAMRQIRCHPKPHLRVIPLWDGIGTGSFSSMEEAHDAWRSLSKSTKRNVWPEICEAESPSKLESLLRSLLFPEGSRVVCAVTGEHGGEGKSYCAFRAAKNIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSQVRKTAGSIRTLKADVIIIEEAAYMPLRTLSTILAAAHCSGTHVIGTYDTHQLQPVHENSGMSISRDNVDRKVVLEKAFPTCFHVFARKRDKTIQEQVEMDEQSLVHSGRRKR*T*SADSSHREVWR*ISR-------------------------------------GYWDALGRQTIVGAQYRDLGSLGKVHKNHSYSIIRSSADEVVVASAFDDGASLEETSLCRAQAEIVFDPPGSCTVHAVQGRTVEGRLIIHQ 1183
            LKFEPALKN LCGER VFEGIVVKLSLDALPPAMR+I C  KP L VIPLWDG+GTG FSSMEEAH AWR L K+TKRN+WPEICEAESPSKLE+LLR  L  +GSR+VCAVTGEHGG GKSYCAF AAKNIFKTGLVVTPTNSLRTSFT++P+GW+VKTADHQLGFYLG+DS V+KTAGSIR LK DVIIIEEAAYMPLRTLS +LAAAH SGTHVIGTYDTHQLQPV E+SGMSISRDNV+RK +LEKAFPTCFHVFARKRDKT+ EQVEMD+  L+H         + + SH    R I R                                     G WD LG +T+VGAQYRDLG+LG+VHKNH+Y+IIRSS D VVVASAFD  ASL+ETSLCRA+AE +FDP G+CTVHAVQGRTVEGRLIIHQ
Sbjct:  680 LKFEPALKNPLCGERRVFEGIVVKLSLDALPPAMRKIPCPLKPRLLVIPLWDGVGTG-FSSMEEAHSAWRRLGKNTKRNMWPEICEAESPSKLENLLRGSLSRQGSRIVCAVTGEHGGAGKSYCAFNAAKNIFKTGLVVTPTNSLRTSFTNLPTGWNVKTADHQLGFYLGDDSHVKKTAGSIRALKVDVIIIEEAAYMPLRTLSMVLAAAHSSGTHVIGTYDTHQLQPVCESSGMSISRDNVNRKFILEKAFPTCFHVFARKRDKTVDEQVEMDD-GLLHI------LAAGNDSHEAQTRAIERFGGGCLDDPSPSDFHLAYTRDCARFYAFRGLLGCNESGGWDVLGHKTVVGAQYRDLGNLGRVHKNHNYNIIRSSGDTVVVASAFDGAASLQETSLCRAEAENLFDPSGACTVHAVQGRTVEGRLIIHQ 1103          
BLAST of mRNA_P-littoralis_Contig1233.6.1 vs. uniprot
Match: A0A6H5KSM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM3_9PHAE)

HSP 1 Score: 583 bits (1504), Expect = 6.890e-194
Identity = 304/432 (70.37%), Postives = 334/432 (77.31%), Query Frame = 2
Query:    2 LKFEPALKNWLCGER-VFEGIVVKLSLDALPPAMRQIRCHPKPHLRVIPLWDGIGTGSFSSMEEAHDAWRSLSKSTKRNVWPEICEAESPSKLESLLRSLLFPEGSRVVCAVTGEHGGEGKSYCAFRAAKNIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSQVRKTAGSIRTLKADVIIIEEAAYMPLRTLSTILAAAHCSGTHVIGTYDTHQLQPVHENSGMSISRDNVDRKVVLEKAFPTCFHVFARKRDKTIQEQVEMDEQSLVHSGRRKR*T*SADSSHREVWR*ISR-------------------------------------GYWDALGRQTIVGAQYRDLGSLGKVHKNHSYSIIRSSADEVVVASAFDDGASLEETSLCRAQAEIVFDPPGSCTVHAVQGRTVEGRLIIHQ 1183
            L+FEPALKN L  ER VF GI  K+SLDALPPAMR+I C PK  +RVIPLWDGIG G FSSM+  HDAWRSL ++ KRN+WPEICEAESPS LESL+R+ +  +GSR+VCAVTGEHGG GKSYCA RAA  IFKTGLVVTPTNSLRTSFTDMP GWSVKTADHQLGFYLG+DS++RKTAGSIRTL  DVIIIEEAAYMPLRTLS ILAAAHCSGTHVIGTYDTHQLQPV ++SG SIS+DNVDR+V+LEKAFP CFHVFARKRDKT++EQVEMD+  L           + D SH    R I R                                     G WD LGRQT+VGAQYRDLG+LGKVHKNH+Y IIRSSADEVVVASAFD   SLEETSLCRA+AE +FDPPGSCTVHAVQGRTVEG LIIHQ
Sbjct:  851 LRFEPALKNPLGDERRVFGGIKTKISLDALPPAMRRILCPPKHRMRVIPLWDGIG-GGFSSMDHVHDAWRSLERNAKRNLWPEICEAESPSNLESLIRAHMLQQGSRLVCAVTGEHGGAGKSYCATRAATAIFKTGLVVTPTNSLRTSFTDMPCGWSVKTADHQLGFYLGDDSEMRKTAGSIRTLNVDVIIIEEAAYMPLRTLSMILAAAHCSGTHVIGTYDTHQLQPVCDSSGRSISKDNVDRRVILEKAFPLCFHVFARKRDKTVEEQVEMDDGLLYILA-------AGDDSHEAQTRAIERFGGGCLDNPSPSDFHLAYTRDCARFHAFRGLLGCDEAGGWDGLGRQTVVGAQYRDLGNLGKVHKNHTYKIIRSSADEVVVASAFDGAVSLEETSLCRAEAENLFDPPGSCTVHAVQGRTVEGTLIIHQ 1274          
BLAST of mRNA_P-littoralis_Contig1233.6.1 vs. uniprot
Match: D8LFQ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFQ2_ECTSI)

HSP 1 Score: 523 bits (1347), Expect = 1.630e-170
Identity = 275/431 (63.81%), Postives = 321/431 (74.48%), Query Frame = 2
Query:    2 LKFEPALKNWLCGERVFEGIVVKLSLDALPPAMRQIRCHPKPHLRVIPLWDGIGTGSFSSMEEAHDAWRSLSKSTKRNVWPEICEAESPSKLESLLRSLLFPEGSRVVCAVTGEHGGEGKSYCAFRAAKNIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSQVRKTAGSIRTLKADVIIIEEAAYMPLRTLSTILAAAHCSGTHVIGTYDTHQLQPVHENSGMSISRDNVDRKVVLEKAFPTCFHVFARKRDKTIQEQVEMDEQSL--VHSGRRKR*T*SADSSHREV-------------------------------WR*ISR----GYWDALGRQTIVGAQYRDLGSLGKVHKNHSYSIIRSSADEVVVASAFDDGASLEETSLCRAQAEIVFDPPGSCTVHAVQGRTVEGRLIIHQ 1183
            LKFEPALKN    +RVF GI VKL+LD LPPAMR I C  +  LRV+PLW GIG  +F +ME AH AWRS+ K  KR +WP+IC AESP+ LE LLR L+  E  RVVCAVTGEHGG GKSYCA RAAK +FKTGLV+TPTNSLRTS+TD+PSGWSVKTADHQLGF++G+D++VRKTAGSI   + DV+IIEEAAYM L  LS I AA H SG HVIGTYDTHQLQPV E+SGMSIS DNVDR++VLE+AFPTCFH+FARKRD+TI EQVEMD+  L  + +G       SA++  R +                               +R ++R    G WDALG+  +VGAQYRDLG  GKVHKNH+Y I+RSSAD VVV SAFDDGA+LEET+L RA AEI+FDPPGSCTVHAVQGRTVEG+L+IHQ
Sbjct:  862 LKFEPALKNAASPDRVFAGIEVKLALDILPPAMRTIPCPRERALRVVPLWGGIGE-TFGTMEAAHAAWRSVGKDDKRKIWPDICAAESPATLERLLRELVSQE-DRVVCAVTGEHGGAGKSYCALRAAKAVFKTGLVLTPTNSLRTSYTDLPSGWSVKTADHQLGFFIGDDARVRKTAGSIHIPRVDVVIIEEAAYMSLHALSMIFAATHSSGVHVIGTYDTHQLQPVRESSGMSISVDNVDRQLVLERAFPTCFHLFARKRDRTIDEQVEMDDSLLYILDAGDN-----SAEAQTRALERFGGIEPTGPGTHVSDFHLAYTRECARFHAFRGLTRCNEAGGWDALGQSAVVGAQYRDLGKTGKVHKNHAYHIVRSSADSVVVQSAFDDGATLEETTLSRAAAEILFDPPGSCTVHAVQGRTVEGKLVIHQ 1285          
BLAST of mRNA_P-littoralis_Contig1233.6.1 vs. uniprot
Match: A0A6H5JCS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS9_9PHAE)

HSP 1 Score: 524 bits (1350), Expect = 2.060e-168
Identity = 280/425 (65.88%), Postives = 313/425 (73.65%), Query Frame = 2
Query:    2 LKFEPALKNWLCGE-RVFEGIVVKLSLDALPPAMRQIRCHPKPHLRVIPLWDGIGTGSFSSMEEAHDAWRSLSKSTKRNVWPEICEAESPSKLESLLRSLLFPEGSRVVCAVTGEHGGEGKSYCAFRAAKNIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSQVRKTAGSIRTLKADVIIIEEAAYMPLRTLSTILAAAHCSGTHVIGTYDTHQLQPVHENSGMSISRDNVDRKVVLEKAFPTCFHVFARKRDKTIQEQVEMDE-----------------QSLVHSGRRKR*T*SADSSHREVWR*ISR-------------GYWDALGRQTIVGAQYRDLGSLGKVHKNHSYSIIRSSADEVVVASAFDDGASLEETSLCRAQAEIVFDPPGSCTVHAVQGRTVEGRLIIHQ 1183
            LKFEPALKN L GE RVFEGIVVKLSLDALPPAMR+I C  KP   V+PLWDGIGT  F+SME AHDAWR L K TKR++WPEICEAESPSKLE L R +L P+GSR+ CAVTGEHGG GKSYC  RAA   F+TGLV+TPTNSLRTS+T++PSGWS                    TAGSIRTLK DVIIIEEAAYMPLRTLS ++AAA+ SGTHVIGTYD HQLQPV ++SGMSISRDNVDRKV+LEKAFP CFHVFARKRDKTI++QVEMD+                 +++   G R     S    H    R  +R             G WD+LG  T+VGAQYRDLG  GK+HKNH+YSI RSSADEVVVASAFD   SLEETSLCR +AE +FDPPG+CTVHAVQGRTVEGRLIIHQ
Sbjct:  906 LKFEPALKNPLTGESRVFEGIVVKLSLDALPPAMRKIPCPLKPPFLVVPLWDGIGT-RFNSMEGAHDAWRRLGKHTKRDLWPEICEAESPSKLECLFRGMLSPQGSRIACAVTGEHGGTGKSYCTIRAATATFETGLVLTPTNSLRTSYTNLPSGWS--------------------TAGSIRTLKVDVIIIEEAAYMPLRTLSMVMAAAYGSGTHVIGTYDVHQLQPVCDSSGMSISRDNVDRKVILEKAFPMCFHVFARKRDKTIEDQVEMDDGLLHILAAGNDSHEAQTRAIERFGGRCHFNPSPSDFHLAYTRDCARFHAFRGLLGCNELGGWDSLGHATLVGAQYRDLGKSGKIHKNHTYSITRSSADEVVVASAFDGAVSLEETSLCRVEAENLFDPPGACTVHAVQGRTVEGRLIIHQ 1309          
BLAST of mRNA_P-littoralis_Contig1233.6.1 vs. uniprot
Match: A0A6H5L2B8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2B8_9PHAE)

HSP 1 Score: 515 bits (1327), Expect = 2.560e-167
Identity = 287/425 (67.53%), Postives = 316/425 (74.35%), Query Frame = 2
Query:    2 LKFEPALKNWLCGER-VFEGIVVKLSLDALPPAMRQIRCHPKPHLRVIPLWDGIGTGSFSSMEEAHDAWRSLSKSTKRNVWPEICEAESPSKLESLLRSLLFPEGSRVVCAVTGEHGGEGKSYCAFRAAKNIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSQVRKTAGSIRTLKADVIIIEEAAYMPLRTLSTILAAAHCSGTHVIGTYDTHQLQPVHENSGMSISRDNVDRKVVLEKAFPTCFHVFARKRDKTIQEQVEMDEQSL-----------VHSGRRKR*------T*SADSSHREVWR*ISR-------------GYWDALGRQTIVGAQYRDLGSLGKVHKNHSYSIIRSSADEVVVASAFDDGASLEETSLCRAQAEIVFDPPGSCTVHAVQGRTVEGRLIIHQ 1183
            LKF PALKN LC ER VFEGIVVKLSLDALPPAMR+I C  KP L VIPLWDGIGT SF SME AHDAWR L ++TKR++ PEICEAE                   VVCAVTGEHGG GK +C  RAA   F+TGLV+TPTN+LRTS+T++PSGWSVKTAD QLGF L +DS V+KTAGSIRTLK DVIIIEEAAYMPLRTLS ILAAAH SGTHVIGTYDT+QLQPV ++SGMSISRDNVDRKV+LEKAFPT F+VFAR+RDKTI++QV+MD+  L            HS   KR         S    H    R  +R             G WD LG QT VGAQYRDLG+ GKVHK H Y++I SSAD VVVASAFDDGASLEETSLCRA+AE VFDPPGSCTVHAVQGRTVEGRLIIHQ
Sbjct:  933 LKFGPALKNPLCEERRVFEGIVVKLSLDALPPAMRKIPCPFKPPLSVIPLWDGIGT-SFHSMEGAHDAWRRLGRNTKRDLSPEICEAE-------------------VVCAVTGEHGGAGKRFCTIRAATATFETGLVLTPTNNLRTSYTNLPSGWSVKTADRQLGFNLSDDSYVKKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAAHSSGTHVIGTYDTNQLQPVCDSSGMSISRDNVDRKVILEKAFPTFFYVFARRRDKTIEDQVQMDDGLLHILAAGNDSDEAHSRAIKRFGGQHIENPSPSDFHLVYTRECARFHAFRGLLGCNEAGDWDGLGCQTAVGAQYRDLGNPGKVHKIHMYNVIGSSADTVVVASAFDDGASLEETSLCRAEAENVFDPPGSCTVHAVQGRTVEGRLIIHQ 1337          
BLAST of mRNA_P-littoralis_Contig1233.6.1 vs. uniprot
Match: A0A6H5KMJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMJ7_9PHAE)

HSP 1 Score: 500 bits (1288), Expect = 6.250e-167
Identity = 279/428 (65.19%), Postives = 311/428 (72.66%), Query Frame = 2
Query:    2 LKFEPALKNWLCGER-VFEGIVVKLSLDALPPAMRQIRCHPKPHLRVIPLWDGIGTGSFSSMEEAHDAWRSLSKSTKRNVWPEICEAESPSKLESLLRSLLFPEGSRVVCAVT-GEHGGEGKSYCAFRAAKNIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSQVRKTAGSIRTLKADVIIIEEAAYMPLRTLSTILAAAHCS-GTHVIGTYDTHQLQPVHENSGMSISRDNVDRKVVLEKAFPTCFHVFARKRDKTIQEQVEMDEQSLVHS------------------GRRKR*T*SADSSHREVWR*ISR-------------GYWDALGRQTIVGAQYRDLGSLGKVHKNHSYSIIRSSADEVVVASAFDDGASLEETSLCRAQAEIVFDPPGSCTVHAVQGRTVEGRLIIHQ 1183
            LKF PALKN LCGER VFEGIV                    P L VIPLWDGIGT SF SME AHDAWR L  +TKR++WPEICEAESPS L+SL R LL P+ + +   +  GEHGG GKSY   RAA   F+TGLV+TPTNSLRTS+ ++PSGWSVKTADHQLGFYL +DS V+KTAGSIRTLK DVIIIEEAAY+PLRTLS ILAAAH S GTHVIGTYDTHQLQPV ++SGMSISRDNVDRKV++EKAFPTCFHVFARKRDKT+++Q EMD+  L+H+                  G       S    H    R  +R             G WD LG QT+VGAQYRDLG+ GK HKNH Y++IRSSAD VVVASAFD GASLEETSLCRA+AE VFDPPGSCTVHAVQGRTVEGRLIIHQ
Sbjct:  258 LKFGPALKNPLCGERRVFEGIV--------------------PPLSVIPLWDGIGT-SFHSMEGAHDAWRRLGLNTKRDLWPEICEAESPSILKSLFRGLLTPQVTALSALLRYGEHGGAGKSYRTIRAATATFETGLVLTPTNSLRTSYPNLPSGWSVKTADHQLGFYLSDDSYVKKTAGSIRTLKVDVIIIEEAAYIPLRTLSMILAAAHSSSGTHVIGTYDTHQLQPVCDSSGMSISRDNVDRKVIVEKAFPTCFHVFARKRDKTLEDQAEMDD-DLLHTLAAGNDSDEAQTRAIARFGGEHIENPSPSDFHLAYTRECARFHAFRGLLGCNEAGDWDGLGCQTVVGAQYRDLGNPGKNHKNHMYNVIRSSADTVVVASAFDGGASLEETSLCRAEAENVFDPPGSCTVHAVQGRTVEGRLIIHQ 663          
BLAST of mRNA_P-littoralis_Contig1233.6.1 vs. uniprot
Match: A0A6H5J754_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J754_9PHAE)

HSP 1 Score: 507 bits (1305), Expect = 4.960e-166
Identity = 283/416 (68.03%), Postives = 308/416 (74.04%), Query Frame = 2
Query:    2 LKFEPALKNWLCGERVFEGIVVKLSLDALPPAMRQIRCHPKPHLRVIPLWDGIGTGSFSSMEEAHDAWRSLSKSTKRNVWPEICEAESPSKLESLLRSLLFPEGSRVVCAVTGEHGGEGKSYCAFRAAKNIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSQVRKTAGSIRTLKADVIIIEEAAYMPLRTLSTILAAAHCSGTHVIGTYDTHQLQPVHENSGMSISRDNVDRKVVLEKAFPTCFHVFARKRDKTIQEQVEMDEQSLVH-------------------SGRRKR*T*SADSSHREVWR*ISRGY-----WDA----LGRQTIVGAQYRDLGSLGKVHKNHSYSIIRSSADEVVVASAFDDGASLEETSLCRAQAEIVFDPPGSCTVHAVQGRTVEG 1165
            LKF PALKN LCGER    IVVKLSLDALP AMR+I C  KP L VIPLWDGIGT SF SME A DAWR L K+TKR++WPEICEAE                   +VCAVTGEHGG GKSYC  RAA   F+TGLV+TPTNSLRTS+T++PSGWSVKTADHQLGFYL +DS V+KTAGSIRTLK DVIIIEEAAYMPLRTLS ILAAAH SGTHVIGTYDTHQLQPV ++SGMSISRDNVDRKV+LEKAFPTCFHVFARKRDKTI++QVEMD+  L+H                    G     T S    H    R  +R +     W A     G    VGAQYRDLG+  KVHKNH Y++IRSSAD VVVASAFDDGASLEETSLCRA+AE VFDPPGSCTVHAVQGRTVEG
Sbjct:  736 LKFGPALKNPLCGERRV-CIVVKLSLDALPSAMRKIPCPFKPPLSVIPLWDGIGT-SFHSMEGADDAWRRLGKNTKRDLWPEICEAE-------------------IVCAVTGEHGGAGKSYCTIRAATATFETGLVLTPTNSLRTSYTNLPSGWSVKTADHQLGFYLSDDSYVKKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAAHSSGTHVIGTYDTHQLQPVCDSSGMSISRDNVDRKVILEKAFPTCFHVFARKRDKTIEDQVEMDD-GLLHILAAGNDSDEAQTRAIERFGGEHIENT-SPSDFHLAYTRECARFHAFEVCWGAPKLGTGMGWGVGAQYRDLGNPDKVHKNHMYNVIRSSADTVVVASAFDDGASLEETSLCRAEAENVFDPPGSCTVHAVQGRTVEG 1128          
BLAST of mRNA_P-littoralis_Contig1233.6.1 vs. uniprot
Match: A0A6H5JHT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT1_9PHAE)

HSP 1 Score: 505 bits (1300), Expect = 7.320e-166
Identity = 273/400 (68.25%), Postives = 305/400 (76.25%), Query Frame = 2
Query:    2 LKFEPALKNWLCGER-VFEGIVVKLSLDALPPAMRQIRCHPKPHLRVIPLWDGIGTGSFSSMEEAHDAWRSLSKSTKRNVWPEICEAESPSKLESLLRSLLFPEGSRVVCAVTGEHGGEGKSYCAFRAAKNIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSQVRKTAGSIRTLKADVIIIEEAAYMPLRTLSTILAAAHCSGTHVIGTYDTHQLQPVHENSGMSISRDNVDRKVVLEKAFPTCFHVFARKRDKTIQEQVEMDEQSLVHSGRRKR*T*SADSSHREVWR*I----SRGYWDALGRQTIVGAQYRDLGSLGKVHKNHSYSIIRSSADEVVVASAFDDGASLEETSLCRAQAEIVFDPPGSCT-VHAVQGRTVEGRLIIHQ 1183
            LKFEPAL N LCGER VFEGIVVK SLDA P A RQI C PK HLRVIPLWDG+G   F+SMEEAH AWR L K+ KR++WPEICEAESPSKLESL R LL P+GSR+VCAVTGEHGG GKSYC  RAA   F+ GLV+TPTNSLRTS+ ++ SGWSV TADHQLGFYL +DS VRKTAGSIRTLK DV IIEEAAY+PLRTLS ILAAAH SGTHVIGTYDTHQLQPV  +SGMSISRDNVDRKV ++       H+ A   D + + Q  + E++                    V+R +      G WD LG QT+VGAQYRDLG+ GKVHKNH Y+++RSSAD VVVASAFDDGASLEE SLCRA+AE V DP GSCT VHAVQ RTVEGRLIIH+
Sbjct:  683 LKFEPALNNTLCGERRVFEGIVVKQSLDAFPLATRQIPCPPKTHLRVIPLWDGVGA-VFNSMEEAHHAWRRLGKNIKRHMWPEICEAESPSKLESLFRGLLSPQGSRLVCAVTGEHGGAGKSYCTIRAATATFEGGLVLTPTNSLRTSYINLSSGWSVNTADHQLGFYLSDDSFVRKTAGSIRTLKVDVFIIEEAAYIPLRTLSMILAAAHSSGTHVIGTYDTHQLQPVCYSSGMSISRDNVDRKVEMDDGL---LHILAPGND-SHEAQARVIERACTRF---------------HVFRGLLGCNEAGDWDGLGCQTVVGAQYRDLGNPGKVHKNHIYNVLRSSADTVVVASAFDDGASLEEFSLCRAEAENVVDPLGSCTAVHAVQVRTVEGRLIIHK 1062          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1233.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWL4_9PHAE1.230e-20873.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV89_ECTSI3.100e-20674.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FQN9_ECTSI4.900e-20071.76Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KSM3_9PHAE6.890e-19470.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFQ2_ECTSI1.630e-17063.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JCS9_9PHAE2.060e-16865.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L2B8_9PHAE2.560e-16767.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMJ7_9PHAE6.250e-16765.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J754_9PHAE4.960e-16668.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHT1_9PHAE7.320e-16668.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1233contigP-littoralis_Contig1233:27014..28293 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FV89
Model size1183
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue8.59e-138
EggNOG OGs2E3IK@1|root,2SAKM@2759|Eukaryota
Cds size762
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789538.6523225-UTR-P-littoralis_Contig1233:27013..272811680789538.6523225-UTR-P-littoralis_Contig1233:27013..27281Pylaiella littoralis U1_48UTRP-littoralis_Contig1233 27014..27281 -
1680789538.662349-UTR-P-littoralis_Contig1233:27378..274341680789538.662349-UTR-P-littoralis_Contig1233:27378..27434Pylaiella littoralis U1_48UTRP-littoralis_Contig1233 27379..27434 -
1680789538.6897802-UTR-P-littoralis_Contig1233:28196..282931680789538.6897802-UTR-P-littoralis_Contig1233:28196..28293Pylaiella littoralis U1_48UTRP-littoralis_Contig1233 28197..28293 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789538.6744661-CDS-P-littoralis_Contig1233:27434..281961680789538.6744661-CDS-P-littoralis_Contig1233:27434..28196Pylaiella littoralis U1_48CDSP-littoralis_Contig1233 27435..28196 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1233.6.1prot_P-littoralis_Contig1233.6.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1233 27435..28196 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1233.6.1

>prot_P-littoralis_Contig1233.6.1 ID=prot_P-littoralis_Contig1233.6.1|Name=mRNA_P-littoralis_Contig1233.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=254bp
MRQIRCHPKPHLRVIPLWDGIGTGSFSSMEEAHDAWRSLSKSTKRNVWPE
ICEAESPSKLESLLRSLLFPEGSRVVCAVTGEHGGEGKSYCAFRAAKNIF
KTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSQVRKTAGSIR
TLKADVIIIEEAAYMPLRTLSTILAAAHCSGTHVIGTYDTHQLQPVHENS
GMSISRDNVDRKVVLEKAFPTCFHVFARKRDKTIQEQVEMDEQSLVHSGR
RKR*
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mRNA from alignment at P-littoralis_Contig1233:27014..28293-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1233.6.1 ID=mRNA_P-littoralis_Contig1233.6.1|Name=mRNA_P-littoralis_Contig1233.6.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1280bp|location=Sequence derived from alignment at P-littoralis_Contig1233:27014..28293- (Pylaiella littoralis U1_48)
TCTCAAGTTTGAACCGGCTTTGAAGAATTGGCTTTGTGGGGAGAGGGTGT TCGAAGGCATCGTGGTCAAGCTATCGCTAGATGCGTTACCTCCGGCAATG AGGCAAATTCGCTGCCACCCGAAGCCCCATCTGCGGGTCATTCCTCTATG GGATGGCATCGGGACCGGCTCATTCAGTTCGATGGAAGAAGCTCACGATG CCTGGCGTTCTCTCTCGAAGAGCACCAAGCGCAATGTGTGGCCGGAAATA TGCGAGGCCGAGTCACCATCGAAACTAGAAAGCTTACTCCGCAGCTTGTT GTTTCCGGAAGGTTCAAGAGTGGTGTGTGCGGTGACCGGAGAACATGGAG GGGAAGGGAAGAGTTATTGTGCATTCCGCGCTGCCAAGAATATATTCAAA ACGGGGCTGGTCGTGACCCCCACTAATAGTCTGAGGACGTCCTTCACAGA CATGCCATCCGGGTGGAGTGTAAAGACCGCCGACCACCAGCTCGGTTTCT ATCTGGGTAATGATTCTCAAGTGAGGAAGACGGCAGGGTCGATACGTACG CTCAAGGCCGATGTCATCATAATCGAAGAAGCTGCTTATATGCCTCTGCG GACCCTAAGCACGATACTGGCCGCTGCCCATTGCAGCGGTACACATGTGA TAGGGACGTATGACACGCACCAACTCCAGCCCGTTCACGAGAATAGCGGC ATGTCGATCAGCAGGGACAACGTCGACAGGAAGGTCGTCCTTGAAAAAGC CTTCCCCACATGTTTTCACGTCTTCGCGCGCAAACGGGATAAAACTATCC AAGAACAAGTGGAGATGGACGAACAGTCTCTTGTACATTCTGGCCGCAGG AAACGATAGACATGAAGCGCAGACTCGAGCCATCGAGAGGTTTGGCGGTG AATTTCCAGAGGCTAACGATCCCAGTCCTTCAGATTTCCACCTCGCTTAC AATAGAGACTGCGCTCGATTCCATGCCTTTCGAAGTTTGCTGGGGTGCAA CGAAGCTGGTGGCTGGGATGCGCTGGGGCGTCAAACGATTGTCGGTGCGC AATACCGGGACCTCGGGAGCCTGGGCAAGGTTCACAAGAATCACAGCTAC AGCATCATCCGATCCTCAGCGGATGAGGTCGTTGTCGCAAGCGCATTTGA CGATGGTGCTAGTCTTGAGGAAACTTCACTCTGTCGAGCGCAGGCAGAAA TCGTTTTTGATCCTCCGGGGTCATGCACAGTACACGCGGTCCAAGGCCGT ACCGTGGAAGGGAGGTTGATCATACATCAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1233:27014..28293-

>mRNA_P-littoralis_Contig1233.6.1 ID=mRNA_P-littoralis_Contig1233.6.1|Name=mRNA_P-littoralis_Contig1233.6.1|organism=Pylaiella littoralis U1_48|type=CDS|length=762bp|location=Sequence derived from alignment at P-littoralis_Contig1233:27014..28293- (Pylaiella littoralis U1_48)
ATGAGGCAAATTCGCTGCCACCCGAAGCCCCATCTGCGGGTCATTCCTCT
ATGGGATGGCATCGGGACCGGCTCATTCAGTTCGATGGAAGAAGCTCACG
ATGCCTGGCGTTCTCTCTCGAAGAGCACCAAGCGCAATGTGTGGCCGGAA
ATATGCGAGGCCGAGTCACCATCGAAACTAGAAAGCTTACTCCGCAGCTT
GTTGTTTCCGGAAGGTTCAAGAGTGGTGTGTGCGGTGACCGGAGAACATG
GAGGGGAAGGGAAGAGTTATTGTGCATTCCGCGCTGCCAAGAATATATTC
AAAACGGGGCTGGTCGTGACCCCCACTAATAGTCTGAGGACGTCCTTCAC
AGACATGCCATCCGGGTGGAGTGTAAAGACCGCCGACCACCAGCTCGGTT
TCTATCTGGGTAATGATTCTCAAGTGAGGAAGACGGCAGGGTCGATACGT
ACGCTCAAGGCCGATGTCATCATAATCGAAGAAGCTGCTTATATGCCTCT
GCGGACCCTAAGCACGATACTGGCCGCTGCCCATTGCAGCGGTACACATG
TGATAGGGACGTATGACACGCACCAACTCCAGCCCGTTCACGAGAATAGC
GGCATGTCGATCAGCAGGGACAACGTCGACAGGAAGGTCGTCCTTGAAAA
AGCCTTCCCCACATGTTTTCACGTCTTCGCGCGCAAACGGGATAAAACTA
TCCAAGAACAAGTGGAGATGGACGAACAGTCTCTTGTACATTCTGGCCGC
AGGAAACGATAG
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