prot_P-littoralis_Contig123.69.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig123.69.4
Unique Nameprot_P-littoralis_Contig123.69.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length322
Homology
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BLAST of mRNA_P-littoralis_Contig123.69.4 vs. uniprot
Match: D7FJ24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ24_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 2.010e-78
Identity = 153/296 (51.69%), Postives = 191/296 (64.53%), Query Frame = 0 
Query:   16 RGAYEMSPDELGEMVQDLVAASLDRRVAGYCCQAAVGRALVAVVNALPAGQSEYARVLSSMVDGLCDPSARALKAQITPFTWALLAKNLPFERASSTRSSPNGSIVTVKRGRGVESAAEAADQNAVCTATAA-------VPSSLRHEVCHRLLSERFLSDTSYASTGESPEGLGRALVALRVLLDDEDDLLEDESSYGYDRQFVVLSLATEMAAGSMAVSKTGKPDGEESRRMILLLDGINKELRNVMQSSVQMSKTLLALTKSKYRPYLPVASARQSKLFSFG---LVSSGAADN 301
            R A++M   +L E++ DL AASLD  V G C +    RALVAVV+A+PA   EY    SS+V GLCDPSAR L++++T FTW LLA+N+PF+R+S                                            V  SL HEVCHRLL ERFL DTSYA   ESP+GLGRAL AL VLL++EDD+LE E+  GY RQ+VV++LA EMAAGSMAVS+T KPDG+E ++M+ LL+ IN+EL +VMQ+SVQMSKTLL L KSKY P+LP +S  QSKL SFG   + S G  D+
Sbjct:    4 RSAHDMGLADLRELMLDLAAASLDEEVNGSC-ETETCRALVAVVDAMPA--REYGDAFSSLVAGLCDPSARGLESRVTTFTWPLLARNVPFKRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVPSLSHEVCHRLLKERFLKDTSYADAEESPQGLGRALKALDVLLENEDDVLESETQEGYKRQYVVVALANEMAAGSMAVSRTAKPDGDECKKMVRLLEAINRELTSVMQNSVQMSKTLLDLMKSKYTPFLPASSGVQSKL-SFGGKTVTSFGGEDS 295
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig123.69.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJ24_ECTSI2.010e-7851.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 299..313
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 298..321

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig123contigP-littoralis_Contig123:344279..348308 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig123.69.4mRNA_P-littoralis_Contig123.69.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig123 342795..356304 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig123.69.4 ID=prot_P-littoralis_Contig123.69.4|Name=mRNA_P-littoralis_Contig123.69.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=322bp
MATRRRRKKRRSCFRRGAYEMSPDELGEMVQDLVAASLDRRVAGYCCQAA
VGRALVAVVNALPAGQSEYARVLSSMVDGLCDPSARALKAQITPFTWALL
AKNLPFERASSTRSSPNGSIVTVKRGRGVESAAEAADQNAVCTATAAVPS
SLRHEVCHRLLSERFLSDTSYASTGESPEGLGRALVALRVLLDDEDDLLE
DESSYGYDRQFVVLSLATEMAAGSMAVSKTGKPDGEESRRMILLLDGINK
ELRNVMQSSVQMSKTLLALTKSKYRPYLPVASARQSKLFSFGLVSSGAAD
NDDDDEEKDGEEDKENNAEFQ*
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