mRNA_P-littoralis_Contig994.7.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig994.7.2
Unique NamemRNA_P-littoralis_Contig994.7.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig994.7.2 vs. uniprot
Match: UPI000A2A66BF (protein ALP1-like isoform X1 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A66BF)

HSP 1 Score: 213 bits (543), Expect = 8.820e-64
Identity = 117/253 (46.25%), Postives = 152/253 (60.08%), Query Frame = 1
Query:   16 YPGRWQDLQREFGREYTQLSRIFNEVVDWAYDNHLHRVTDCLEFFAPRFPQMCKKIEAKGGNFI---GFIDGTLRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYFDMTAPSLEAY 762
            YP RW DLQ  FGR  ++LS IFNEV+D  Y++H H + D L+          + I AKG       GFIDGT R   RP      Q  +Y GH   H L +QSV   +G++  ++GP  GRRHD+ +L  SGL  +L  LQ  N   Y +YGD AY +  ++   FRG  LT  Q+ +N+ +SK+RVAVEW FGK+ Q F F+DF KN+K+ LQ V KYY +A LLTN HTC+  S TG YF++  PSLE Y
Sbjct:  146 YPNRWCDLQSLFGRSESELSLIFNEVIDDIYESH-HHLIDALDLVWLDPQTFSQAIHAKGAPLDQCWGFIDGTPRPIARP---IRSQRIMYSGHKRVHCLKFQSVQAPNGLIAHLFGPIEGRRHDAFMLGESGLADKLRPLQRPNGEPYVIYGDPAYGLTRNILAPFRGAQLTHDQQEFNRRMSKLRVAVEWGFGKICQQFAFLDFKKNMKVLLQPVGKYYVVAALLTNCHTCLYNSQTGRYFELYPPSLEDY 394          
BLAST of mRNA_P-littoralis_Contig994.7.2 vs. uniprot
Match: UPI00106D38F2 (uncharacterized protein LOC114539259 n=4 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106D38F2)

HSP 1 Score: 200 bits (508), Expect = 5.410e-59
Identity = 113/259 (43.63%), Postives = 152/259 (58.69%), Query Frame = 1
Query:   16 YPGRWQDLQREFGREYTQLSRIFNEVVDWAYDNHLHRVTDCLEF-FAP-RFPQMCKKIEAKGG---NFIGFIDGTLRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAAL---QEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYFDMTAPSLEAYF 765
            YP R+ D+   FGR   +LS I N VVD+ YD+H HRV+   E  F+P         I  KG    N +GFIDGT+R   RPG    +Q  +Y+GH   H + +QSV   +GM+  ++GP  GRRHDS +L++SGL  +L      +EG      +YGD AYP+  H+   FR   LT   K +NK +SKVR+AVEW FG +V  F F+DF KNLKI L  V K Y +  +L NA TC+ G+ T  YF ++ P+L+ YF
Sbjct:  104 YPCRYSDMIPLFGRAVPELSMITNVVVDYIYDHHGHRVSHWNEMLFSPDNLKDYASSIFLKGAALNNCVGFIDGTVRAICRPG---KLQRAVYNGHKRVHAIKFQSVALPNGMIGHLYGPMEGRRHDSFMLAQSGLLNQLQTFCFTEEGQPLC--LYGDPAYPLRVHLQAPFRNAVLTQPMKEFNKSMSKVRIAVEWLFGDIVNYFKFMDFKKNLKIGLSCVGKMYIVCAILRNALTCLYGNQTSEYFGLSPPTLQEYF 357          
BLAST of mRNA_P-littoralis_Contig994.7.2 vs. uniprot
Match: UPI00077A71E6 (uncharacterized protein LOC107340903 n=3 Tax=Acropora TaxID=6127 RepID=UPI00077A71E6)

HSP 1 Score: 200 bits (509), Expect = 8.850e-59
Identity = 108/253 (42.69%), Postives = 151/253 (59.68%), Query Frame = 1
Query:   16 YPGRWQDLQREFGREYTQLSRIFNEVVDWAYD--NHLHRVTDCLEFFAPRFPQMCKKIEAKGGNFIGFIDGTLRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAA-LQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYFDMTAPSLEAY 762
            YP RW +L + FGR   +LS IFNE++   Y+  +HL    D +   A  F +      A   +  GF+DGT R  TRP      Q  ++ GH   H L +QSVV  +GM+  ++GP  GRRHD+ +L+ SGL  +L   L + N   Y +YGD AYP+  H+   FRG  LT  ++ +NK++S VR++VEW +GK+V+ F F+DF KNLK+ LQ V K Y +  +L N HTC+ GS TG +FD+  PSLE Y
Sbjct:  139 YPNRWCELTKLFGRAEPELSMIFNEILSDVYNRFSHLLESLDLIWLDADAFSRAIYGKGAPLRDCWGFVDGTARPTTRP---VRNQRIMFSGHKRVHCLKFQSVVSPNGMICHLFGPVEGRRHDAFMLAESGLLPKLERRLNKPNGEPYVIYGDPAYPVRRHILAPFRGARLTPDEERFNKDMSTVRISVEWGYGKIVRYFAFLDFNKNLKVLLQPVGKMYVVGAILANCHTCLYGSQTGDFFDLDPPSLETY 388          
BLAST of mRNA_P-littoralis_Contig994.7.2 vs. uniprot
Match: UPI00077A7035 (uncharacterized protein LOC107333236 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A7035)

HSP 1 Score: 194 bits (493), Expect = 1.930e-57
Identity = 106/253 (41.90%), Postives = 149/253 (58.89%), Query Frame = 1
Query:   16 YPGRWQDLQREFGREYTQLSRIFNEVVDWAYDNHLHRVTDCLEFFAPRFPQMCKKIEAKGGNFI---GFIDGTLRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYFDMTAPSLEAY 762
            YP RW DL+  FGR  ++LS IF+EV+D  +D     + D L+          + I  KG       GFIDGT R   RP      Q+ +Y GH   H + +QSV   +G++  ++GP  G+RHD+ +L  SGL  +L   Q  N   Y +YGD AY +  ++   +RG  LTD Q+ +N ++SK+R  VEW FGK+ Q+F F+DF KNLK+ LQ + KYY +AV+L N HTC+ GS TG YF++  P+LE Y
Sbjct:   50 YPSRWCDLEAIFGRSESELSLIFHEVLDDIHDR-FSDLLDSLDLIWLDPGLFSQVIHWKGAPLTQCWGFIDGTPRPIARP---TRNQQIMYSGHKRTHCIKFQSVQAPNGLIAHMFGPIEGKRHDAFMLGVSGLADKLRRFQRPNGEPYVIYGDPAYGLSRNILAPYRGVRLTDDQQEFNSQMSKMRCCVEWGFGKISQLFAFLDFKKNLKVLLQPIGKYYLVAVILINCHTCLYGSQTGAYFNLDPPTLETY 298          
BLAST of mRNA_P-littoralis_Contig994.7.2 vs. uniprot
Match: UPI00077AC7F2 (uncharacterized protein LOC107350804 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077AC7F2)

HSP 1 Score: 195 bits (496), Expect = 4.380e-57
Identity = 114/260 (43.85%), Postives = 151/260 (58.08%), Query Frame = 1
Query:    1 LLQRRYPGRWQDLQREFGREYTQLSRIFNEVVDWAYD--NHLHRVTDCLEFFAPRFPQMCKKIEAKGGNFI---GFIDGTLRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYFDMTAPSLEAY 762
            LL+  YP RW DL   FGR+  QLS IFN+V+D  Y+  NHL    D +      F Q    +EAKG       GFIDGT R   RP      Q  ++ GH   H L +QSV   +G++  ++GP  GRRHD+ +L  SGL  +L  LQ      Y +YGD AY +  ++   FRG  LT+ ++ +N ++SKVR  VEW FGK+ Q F F+DF KNL++ LQ V KYY +A +L N HTC+ GS T  YF++  PSLE Y
Sbjct:  113 LLRLVYPSRWCDLAPVFGRDEPQLSLIFNKVMDDIYERFNHLLTSLDLVWLDPEMFSQA---VEAKGAPLHQCWGFIDGTPRPIARP---IRNQRIMFSGHKRTHCLKFQSVQAPNGIIAHMFGPIEGRRHDAFMLGISGLADKLERLQTPTGEPYVIYGDPAYGLTRNILAPFRGVQLTNDEQLFNTQMSKVRTCVEWGFGKICQNFAFLDFKKNLRVLLQPVGKYYLVASILVNCHTCLYGSQTSTYFNLEPPSLERY 366          
BLAST of mRNA_P-littoralis_Contig994.7.2 vs. uniprot
Match: A0A6S7GNP4_PARCT (DDE Tnp4 domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GNP4_PARCT)

HSP 1 Score: 194 bits (494), Expect = 7.260e-57
Identity = 107/254 (42.13%), Postives = 147/254 (57.87%), Query Frame = 1
Query:   16 YPGRWQDLQREFGREYTQLSRIFNEVVDWAYDNHLHRVTDC-LEFFAPRFPQMCKKIEAKGGNFI---GFIDGTLRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYFDMTAPSLEAY 762
            YP RW DL + FGR   +LS +FN V++  Y    H +T   L +  P        +  KG       GFIDGT RR  RP      Q  +Y GH   H + +QSV+  +G++  ++GP  GRRHD+ +L  SGL   L  + + N   Y VYGD AY I  H+   F+G  LT+ Q+ +N+++S+VRV VEW FGK+ Q F ++DF KNLK+ LQ VAKYYA+  LL N HTC+ GS+   +F++  P LE Y
Sbjct:  110 YPNRWCDLVKIFGRSEAELSILFNMVINDIYTRFNHLLTSLDLAWLDPAI--FADAVHCKGAPLNQCWGFIDGTTRRIARP---VRNQNVMYSGHKRIHCIKFQSVLAPNGLIAHLFGPIEGRRHDAFMLGVSGLLPLLERIIKPNGEPYVVYGDPAYGISRHIISPFKGAHLTEPQQQFNRDMSEVRVCVEWGFGKIAQYFAYLDFQKNLKVLLQPVAKYYAVGALLINCHTCLYGSVASSFFNLDPPLLEDY 358          
BLAST of mRNA_P-littoralis_Contig994.7.2 vs. uniprot
Match: A0A6J8AX30_MYTCO (DDE Tnp4 domain-containing protein n=2 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8AX30_MYTCO)

HSP 1 Score: 193 bits (491), Expect = 1.300e-56
Identity = 110/263 (41.83%), Postives = 152/263 (57.79%), Query Frame = 1
Query:    1 LLQRR--YPGRWQDLQREFGREYTQLSRIFNEVVDWAYDNHLHRVTDCLEFFAPR--FPQMCKKIEAKGG---NFIGFIDGTLRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQ-YRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYFDMTAPSLEAY 762
            LL RR  YP R  DL+  FGR  T +S I N V+++ YD H H + D    +       +    I A+     N  GFI GT+R   RP      Q  L++GH   H + +QS+V  +G++  ++GP  GRRHD+ LL  SG+ G L       T   Y +YGD AYP+ +H+ + FRG  ++ AQ  +NK++S VR  VEW FGK++ +F F+D+ KNLK+ LQ V KYY +  +L N HTC+ GS TG YFD+  PSLE Y
Sbjct:   84 LLLRRLTYPSRLSDLKSVFGRSVTAMSIIINTVLNFVYDAHNHLLHDLNSNWLSHRHLQEYADAIAARDAPLLNCWGFIYGTVRPLCRP---TTNQRILFNGHKRVHAIKFQSIVAPNGLVANMYGPIEGRRHDAGLLRESGICGELQTHMTTPTGDIYVIYGDPAYPMTTHIIKTFRGGVISAAQARFNKKISAVRTCVEWTFGKILTLFAFLDYKKNLKLYLQPVGKYYLVGTILVNCHTCLYGSETGHYFDIDPPSLENY 343          
BLAST of mRNA_P-littoralis_Contig994.7.2 vs. uniprot
Match: A0A6P8HEE0_ACTTE (uncharacterized protein LOC116291725 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HEE0_ACTTE)

HSP 1 Score: 194 bits (492), Expect = 1.370e-56
Identity = 109/252 (43.25%), Postives = 144/252 (57.14%), Query Frame = 1
Query:   16 YPGRWQDLQREFGREYTQLSRIFNEVVDWAYDN--HLHRVTDCLEFFAPRFPQMCKKIEAKGGNFIGFIDGTLRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYFDMTAPSLEAY 762
            YP RW DL   FGR  ++LS IFN+V+D  YD   HL    D +      F Q+     A      GFIDGT R   RP    A Q  +Y GH   H L +QSV   +G++  ++GP  GRRHD+ +L  SGL  +L   Q+ +   Y +YGD AY I  ++   FRG  L   Q+ +N  +SKVRV VEW FGK+ Q+F F+DF +NLK+ LQ  AKYY +A +L N HTC+ GS T  +F +  P+LE Y
Sbjct:  109 YPNRWCDLVPIFGRPESELSLIFNKVLDDIYDRFKHLLESLDLIWLDPQLFSQVIYDKGAPLEQCWGFIDGTPRPIARP---TANQRIMYSGHKRTHCLKFQSVQAPNGLIAHMYGPIEGRRHDAFMLGESGLLNKLQRFQKPSGEPYVIYGDPAYGITQNIISPFRGARLPPDQQQFNSLMSKVRVTVEWGFGKITQLFAFLDFKRNLKVLLQPTAKYYLVACVLVNCHTCLYGSQTSKFFGLDPPTLERY 357          
BLAST of mRNA_P-littoralis_Contig994.7.2 vs. uniprot
Match: UPI00106A72DF (uncharacterized protein LOC114526587 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106A72DF)

HSP 1 Score: 189 bits (481), Expect = 2.690e-56
Identity = 108/248 (43.55%), Postives = 144/248 (58.06%), Query Frame = 1
Query:   49 FGREYTQLSRIFNEVVDWAYDNHLHRVTDCLEF-FAP-RFPQMCKKIEAKGG---NFIGFIDGTLRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAAL---QEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYFDMTAPSLEAYF 765
            FGR   +LS I N VVD+ YD+H HRV+   E  F+P         I  KG    N +GFIDGT+R   RPG    +Q  +Y+GH   H + +QSV   +GM+  ++GP  GRRHDS +L++SGL  +L      +EG      +YGD AYP+  H+   FR   LT   K   K +SKVR+AVEW FG +V  F F+DF KNLKI L  V K Y +  +L NA TC+ G+ T  YF ++ P+L+ YF
Sbjct:    5 FGRAVPELSMITNVVVDYIYDHHGHRVSHWNEMLFSPDNLKDYASSIFLKGAALNNCVGFIDGTVRAICRPG---KLQRAVYNGHKRVHAIKFQSVALPNGMIGHLYGPMEGRRHDSFMLAQSGLLNQLQTFCFTEEGQPLC--LYGDPAYPLRVHLQAPFRNAVLTQPMKELYKSMSKVRIAVEWLFGDIVNYFKFMDFKKNLKIGLSCVGKMYIVCAILRNALTCLYGNQTSEYFGLSPPTLQEYF 247          
BLAST of mRNA_P-littoralis_Contig994.7.2 vs. uniprot
Match: UPI00106B81BB (uncharacterized protein LOC114518718 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106B81BB)

HSP 1 Score: 190 bits (482), Expect = 2.970e-56
Identity = 105/254 (41.34%), Postives = 147/254 (57.87%), Query Frame = 1
Query:   16 YPGRWQDLQREFGREYTQLSRIFNEVVDWAYDNHLHRVTDC-LEFFAPRFPQMCKKIEAKGGNFI---GFIDGTLRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYFDMTAPSLEAY 762
            YP RW DL   FGR  ++LS IFN+++D   D   + +    L +F P        I  KG       GFIDGT+R   RP      Q+ ++ GH   H + +QSV   +G++  ++GP  GRRHD+ +L  S L  +L  +++ N   Y +YGD AY +  ++   FRG  LT  ++ +NK +SK+RV+VEW FGK+ Q F F+DF KN KI LQ + KYY +  LLTN HTC+ GS+T  YF +  PSLE Y
Sbjct:   13 YPNRWCDLVSIFGRSESELSLIFNKILDDICDRFSYLLDSLDLVWFDPEL--FSNPIHNKGAPLTQCWGFIDGTVRPIPRP---IRNQQIMFSGHKRTHCIKFQSVHAPNGLIANMFGPVEGRRHDAFILGVSNLADKLCRIRQPNGEPYIIYGDPAYGVTDNILAPFRGVFLTADEQEFNKRMSKLRVSVEWGFGKIAQYFAFLDFKKNQKILLQPIGKYYLVGTLLTNCHTCLYGSLTSSYFGVQPPSLETY 261          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig994.7.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000A2A66BF8.820e-6446.25protein ALP1-like isoform X1 n=2 Tax=Exaiptasia di... [more]
UPI00106D38F25.410e-5943.63uncharacterized protein LOC114539259 n=4 Tax=Dendr... [more]
UPI00077A71E68.850e-5942.69uncharacterized protein LOC107340903 n=3 Tax=Acrop... [more]
UPI00077A70351.930e-5741.90uncharacterized protein LOC107333236 n=1 Tax=Acrop... [more]
UPI00077AC7F24.380e-5743.85uncharacterized protein LOC107350804 n=1 Tax=Acrop... [more]
A0A6S7GNP4_PARCT7.260e-5742.13DDE Tnp4 domain-containing protein n=1 Tax=Paramur... [more]
A0A6J8AX30_MYTCO1.300e-5641.83DDE Tnp4 domain-containing protein n=2 Tax=Mytilus... [more]
A0A6P8HEE0_ACTTE1.370e-5643.25uncharacterized protein LOC116291725 n=1 Tax=Actin... [more]
UPI00106A72DF2.690e-5643.55uncharacterized protein LOC114526587 n=1 Tax=Dendr... [more]
UPI00106B81BB2.970e-5641.34uncharacterized protein LOC114518718 n=1 Tax=Dendr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig994contigP-littoralis_Contig994:34669..35955 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog7668.SPU_016560-tr
PFAMsDDE_Tnp_4
Model size774
Max annot lvl33154|Opisthokonta
Hectar predicted targeting categoryother localisation
Exons2
Evalue8.58e-53
EggNOG OGs2AWDH@1|root,2RZYI@2759|Eukaryota,3A38W@33154|Opisthokonta,3BS4I@33208|Metazoa,3D9UV@33213|Bilateria
DescriptionDDE superfamily endonuclease
Cds size774
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791918.832704-CDS-P-littoralis_Contig994:34668..348611680791918.832704-CDS-P-littoralis_Contig994:34668..34861Pylaiella littoralis U1_48CDSP-littoralis_Contig994 34669..34861 +
1680791918.846699-CDS-P-littoralis_Contig994:35374..359551680791918.846699-CDS-P-littoralis_Contig994:35374..35955Pylaiella littoralis U1_48CDSP-littoralis_Contig994 35375..35955 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig994.7.2prot_P-littoralis_Contig994.7.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig994 34669..35955 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig994.7.2

>prot_P-littoralis_Contig994.7.2 ID=prot_P-littoralis_Contig994.7.2|Name=mRNA_P-littoralis_Contig994.7.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=258bp
LLQRRYPGRWQDLQREFGREYTQLSRIFNEVVDWAYDNHLHRVTDCLEFF
APRFPQMCKKIEAKGGNFIGFIDGTLRRNTRPGGDPAVQEQLYDGHHCAH
GLAWQSVVFAHGMMEIWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQY
RVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQ
IFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYFDMTAPS
LEAYFAF*
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mRNA from alignment at P-littoralis_Contig994:34669..35955+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig994.7.2 ID=mRNA_P-littoralis_Contig994.7.2|Name=mRNA_P-littoralis_Contig994.7.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=1287bp|location=Sequence derived from alignment at P-littoralis_Contig994:34669..35955+ (Pylaiella littoralis U1_48)
TTGCTCCAACGCAGGTATCCTGGACGCTGGCAGGACCTGCAAAGGGAGTT CGGCCGAGAGTACACCCAGTTGAGTCGAATTTTCAACGAGGTGGTCGACT GGGCGTACGACAACCACCTGCACAGGGTGACTGACTGCCTGGAGTTCTTC GCTCCACGCTTCCCTCAGATGTGCAAGAAGATAGAAGCGAAAGGTGACCA TTTTAACGGCGTCGTACTCGGTGTTCTCGTGAAGCAGAAAGCCAGGGTTG TGCCGCTGCCGCCGGTTGATAATTGCCCGCCTGAGCCGAGGCCCCCTTTT TTATGTTTGGCATACAGACACTAGTACGATGTAAACACAAAGCCACGTGA AGATGATACACAACAAAGCAGCAGCAGCCACCTTAGCTACAGCGGTTTTA ACCTTGCCACAGCTGGTGGTTTTGCGCGCACTGCTGGTTGTGCAATGAGG AGAGTTCGTTGCGCTCTCTGCCTGTCTCTCTCTTTCTCTCTCTATCTGTG TGTGTTGTGGGCGCACGGTAGCAGCAGCACACACAGAAGTGCAGCGTTTT GGACACAGAGCCCCAAATAACCAAACGGACCTTAGTCATGGACGTAAAAT TCATCAAGGAAAACAGGTCACACATATCAGAGCCTCTTGTGTGCGTTGCG TCGCTCCTTTTTTCGGTTTCGTTTTCTTCGTACATCAGGTGGAATGGTAT GCGAAGGCGGTAACTTCATCGGGTTCATCGACGGGACACTCAGGAGGAAC ACTCGCCCAGGGGGGGATCCGGCAGTGCAGGAGCAATTGTACGACGGTCA CCACTGCGCCCACGGCCTTGCTTGGCAATCAGTTGTCTTTGCTCACGGAA TGATGGAAATTTGGGGACCGGAGACAGGGCGGCGACACGACTCCCTTCTT CTGTCGAGGAGCGGACTGAACGGGAGACTCGCCGCTCTGCAGGAAGGCAA CACTACGCAGTACAGGGTGTACGGCGATGCTGCATACCCCATCTTGTCTC ACGTCGACCGGGGTTTCCGCGGAGAGGGTCTCACAGATGCGCAGAAGGCC TACAACAAGGAGCTTTCTAAGGTCAGGGTGGCGGTGGAGTGGCAGTTCGG CAAGGTCGTGCAGATTTTCCCGTTTGTCGACTTCGCGAAAAACCTGAAGA TCAGGCTGCAGGCGGTCGCGAAGTACTACGCCTTGGCTGTACTGCTCACC AACGCGCACACCTGCATCTCCGGGAGCATCACCGGCTTCTACTTCGACAT GACCGCGCCGTCACTAGAGGCGTACTTTGCGTTCTAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig994:34669..35955+

>mRNA_P-littoralis_Contig994.7.2 ID=mRNA_P-littoralis_Contig994.7.2|Name=mRNA_P-littoralis_Contig994.7.2|organism=Pylaiella littoralis U1_48|type=CDS|length=774bp|location=Sequence derived from alignment at P-littoralis_Contig994:34669..35955+ (Pylaiella littoralis U1_48)
TTGCTCCAACGCAGGTATCCTGGACGCTGGCAGGACCTGCAAAGGGAGTT
CGGCCGAGAGTACACCCAGTTGAGTCGAATTTTCAACGAGGTGGTCGACT
GGGCGTACGACAACCACCTGCACAGGGTGACTGACTGCCTGGAGTTCTTC
GCTCCACGCTTCCCTCAGATGTGCAAGAAGATAGAAGCGAAAGGCGGTAA
CTTCATCGGGTTCATCGACGGGACACTCAGGAGGAACACTCGCCCAGGGG
GGGATCCGGCAGTGCAGGAGCAATTGTACGACGGTCACCACTGCGCCCAC
GGCCTTGCTTGGCAATCAGTTGTCTTTGCTCACGGAATGATGGAAATTTG
GGGACCGGAGACAGGGCGGCGACACGACTCCCTTCTTCTGTCGAGGAGCG
GACTGAACGGGAGACTCGCCGCTCTGCAGGAAGGCAACACTACGCAGTAC
AGGGTGTACGGCGATGCTGCATACCCCATCTTGTCTCACGTCGACCGGGG
TTTCCGCGGAGAGGGTCTCACAGATGCGCAGAAGGCCTACAACAAGGAGC
TTTCTAAGGTCAGGGTGGCGGTGGAGTGGCAGTTCGGCAAGGTCGTGCAG
ATTTTCCCGTTTGTCGACTTCGCGAAAAACCTGAAGATCAGGCTGCAGGC
GGTCGCGAAGTACTACGCCTTGGCTGTACTGCTCACCAACGCGCACACCT
GCATCTCCGGGAGCATCACCGGCTTCTACTTCGACATGACCGCGCCGTCA
CTAGAGGCGTACTTTGCGTTCTAG
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