prot_P-littoralis_Contig99.105.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig99.105.1
Unique Nameprot_P-littoralis_Contig99.105.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length387
Homology
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BLAST of mRNA_P-littoralis_Contig99.105.1 vs. uniprot
Match: A0A6H5KB96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB96_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 1.840e-34
Identity = 156/428 (36.45%), Postives = 187/428 (43.69%), Query Frame = 0 
Query:    1 MLSRKQQWRRIKIRRSSRLPGFDVVRDRDISNKGEDGRRDLCCSSSAAVKQAFESDGADSDQTTLSTWSSFGSLDEDDDAXXXXXXXXXXX------------AVNH-------SVSFQDEVQVFLVMHKSEIDVSAKQALWWTGREAAINKRAWLDHIGQPGCGRQSARR------PLQHCSS--HFLGAGRNTAAGRXXXXXXXXXFE---------------AEQEGRALNAAAQAL-LAGGVGILGCLCPACLAEGEMDERDEFEAQQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNRQLPPFYNEVYANGWASAAVASDCGRDHYFYPPRPQPPIVPXXXXXXXXXXXXXXXGRRTGAAARGPSKSWPSPRDWDREDDLGGKGSRSDSPDMARGRSPLSEACQAYDDDDDVFPSGSYFF 385
            ML+RKQQW RI++RR  R PG          ++G+         +   V Q  E DG  +  ++  T S+          XXXXXXXXXXX            AV+         VSFQ EV+VFLV H SE+D+ AKQALWWTGR+AA+NKRAWL H+GQPGCGR+S  +      P +H SS  HFLG GR+TAA R                          AE  G    A  Q+L L   VGILGC C ACL EGE +   E                                       Q P                         + PP   P       XXXXXXXXXXXX                         DLG KGS+S SP   +G SPL EAC++YDDD+ VFP+GSYFF
Sbjct:    1 MLTRKQQWMRIRVRR--RDPGNTGGNTSIKKHRGQPQXXXXXXXACGGVDQGEEEDGGSTSTSSSGTMSTXXXXXXXXXXXXXXXXXXXXXXXXXLLPLPSQDAVDRPRAPRIKGVSFQQEVEVFLVTHNSELDLRAKQALWWTGRDAAMNKRAWLHHLGQPGCGRESVGQQPRPYQPKRHRSSPSHFLGGGRHTAADRGLGGRPWPSHSSAGGLLSADTADTAGAEASGAVAAAEEQSLFLPAAVGILGCRCQACLTEGEHEHEHE---------------------------------------QQPXXXXXXXXT----------------YEPPSQAPQPYDHRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLGMKGSKSYSPASVQGSSPLLEACESYDDDEGVFPTGSYFF 371
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig99.105.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KB96_9PHAE1.840e-3436.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 334..350
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 313..374

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig99contigP-littoralis_Contig99:467698..473973 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig99.105.1mRNA_P-littoralis_Contig99.105.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig99 466806..477216 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig99.105.1 ID=prot_P-littoralis_Contig99.105.1|Name=mRNA_P-littoralis_Contig99.105.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=387bp
MLSRKQQWRRIKIRRSSRLPGFDVVRDRDISNKGEDGRRDLCCSSSAAVK
QAFESDGADSDQTTLSTWSSFGSLDEDDDAGAALPLPPPAPAVNHSVSFQ
DEVQVFLVMHKSEIDVSAKQALWWTGREAAINKRAWLDHIGQPGCGRQSA
RRPLQHCSSHFLGAGRNTAAGRGRGGGSGAGFEAEQEGRALNAAAQALLA
GGVGILGCLCPACLAEGEMDERDEFEAQQREENLLLLRQQQQQQQELPPA
YDCCPPPAYYSNRQLPPFYNEVYANGWASAAVASDCGRDHYFYPPRPQPP
IVPLAAASAATGSGGYGGGRRTGAAARGPSKSWPSPRDWDREDDLGGKGS
RSDSPDMARGRSPLSEACQAYDDDDDVFPSGSYFFD*
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