prot_P-littoralis_Contig982.2.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig982.2.2
Unique Nameprot_P-littoralis_Contig982.2.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length448
Homology
BLAST of mRNA_P-littoralis_Contig982.2.2 vs. uniprot
Match: A0A6H5JC47_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC47_9PHAE)

HSP 1 Score: 405 bits (1042), Expect = 1.550e-134
Identity = 243/292 (83.22%), Postives = 262/292 (89.73%), Query Frame = 0
Query:  155 VVRAKKERKEDSEKLERERERAAAEKAREDKDELQCKLATLEAERRVQQAEIXXXXXXXXXXXXXXXXXXXXXXXXXRLRDQLKKADPPSRDHLRRKSTQQQQPVQRAAITVHDVMETGPFSHDALKEIASPIHGKGLGTKVAFVEGDTILTVLLPDVEVPVGYDRKGGGYTCMGHIMHTDGLGALVIDPSKTMRGTIPACRAFMEIGLLRLLNHSLTPNAKLQIGGGGERMKPWWYERAGGVEYGWWYECSIVARADIAVGAEVTIEYADPPEEAVRPQPPKRASKRSRRR 446
            V +A+K+RKE+SEKL RERER AA+KA+E+ DEL+ KLATLEA+RR QQAEIXXXXXXXXXXXXXXXXXXXXXXXX +LRDQLKKA PP+RDHLRR STQQQ PVQR A+TVHDVME   FSHDALKEI S IH KGLGTKVAF EGDT+LTV+LPDV+VP GY++KGGGYTCMG+IMH DGLGALVIDPSKTMRGTIPACRAFMEI LLRLLNHS  PNAKL I GGG RMKPWWYERAGGVEYGWWYECSIVA ADI VGAEVTIEYADPP+ A RPQPPKRASKRSRRR
Sbjct:  218 VAQAEKKRKEESEKLVREREREAADKAKEENDELRRKLATLEAKRREQQAEIXXXXXXXXXXXXXXXXXXXXXXXXDKLRDQLKKASPPARDHLRR-STQQQPPVQRPALTVHDVMEKDLFSHDALKEINSLIHCKGLGTKVAFAEGDTLLTVVLPDVDVPAGYEKKGGGYTCMGYIMHADGLGALVIDPSKTMRGTIPACRAFMEISLLRLLNHSFAPNAKLVIHGGGGRMKPWWYERAGGVEYGWWYECSIVACADIEVGAEVTIEYADPPKGAKRPQPPKRASKRSRRR 508          
BLAST of mRNA_P-littoralis_Contig982.2.2 vs. uniprot
Match: A0A6H5JFA9_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFA9_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 7.430e-28
Identity = 72/166 (43.37%), Postives = 91/166 (54.82%), Query Frame = 0
Query:  264 ITVHDVMETGPFSHDALKEIASPIHGKGLGTKVAFVEGDTILTVLLPDVEVPVGYDRKGGGYTCMGHIMHTDGLGALVIDPSKTMRGTIPACRAFMEIGLLRLLNHSLTPNAKLQIGGGGERMKPWWYERAGGVEYGWWYECSIVARADIAVGAEVTIEYADPPEE 429
            IT  D      ++H+ +    S I G GL +K A   G  +   LLPD  V   +      Y+C  HIMH DG  AL IDP + MRG + AC A  +I LLRLLNHS +PN +L +G   +   P W+E  GG EYG WY CSI A  +I  G E+TI+YA  P E
Sbjct:  749 ITAADARGYYAWAHEKVVCKKSDIAGNGLFSKGAVDRGQDVFAALLPDEPVESAF--ANADYSCYSHIMHADGQSALAIDPGRNMRGNVFACEADNDIRLLRLLNHSKSPNVELSVG---DAATPDWFEAIGGAEYGPWYTCSIKALENIEKGVELTIKYAGAPAE 909          
BLAST of mRNA_P-littoralis_Contig982.2.2 vs. uniprot
Match: A0A6H5JBG8_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBG8_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 9.580e-18
Identity = 66/183 (36.07%), Postives = 89/183 (48.63%), Query Frame = 0
Query:  249 RRKSTQQQQPVQRAAITVHDVMETGPF----SHDALKEIASPIHGKGLGTKVAFVEGDTILTVLLPDVEVPVGYDRKGGGYTCMGHIMHTDGLGALVIDPSKTMRGTIPACRAFMEIGLLRLLNHSLTPNAKLQIGGGGERMKPWWYE--RAG-GVEYGWWYECSIVARADIAVGAEVTIEYA 424
            R K+ +  QP + AA+    + +  PF     H  ++E  S I G G   K    +G T+ T +LP  E    +  +   Y C  H+MH D  G + IDP    RG +  C   M   ++RLLNHS +PNA+L  GG      P WYE  RAG       WY CS+V R  +  G E+TI YA
Sbjct:   92 REKAQEPDQPKEMAALHFRSMHDEVPFVWLKEHFEVEEKPSQIEGHGAFLKRGASKGTTVHTSVLPSSEFSDDFTIEQ--YDCCYHVMHGDKNGVVYIDPGALFRGNLMGCLEDMGSRVIRLLNHSSSPNAELCFGGA---APPDWYEPTRAGQAAVITSWYTCSLVTRRRVEAGEELTICYA 269          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig982.2.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JC47_9PHAE1.550e-13483.22SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JFA9_9PHAE7.430e-2843.37SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JBG8_9PHAE9.580e-1836.07SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 118..236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..252
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 426..447
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..260
IPR046341SET domain superfamilyGENE3D2.170.270.10SET domaincoord: 179..435
e-value: 4.5E-8
score: 35.0
IPR046341SET domain superfamilySUPERFAMILY82199SET domaincoord: 277..426
IPR001214SET domainPFAMPF00856SETcoord: 178..423
e-value: 6.3E-5
score: 23.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig982contigP-littoralis_Contig982:2391..10413 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig982.2.2mRNA_P-littoralis_Contig982.2.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig982 2180..10637 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig982.2.2 ID=prot_P-littoralis_Contig982.2.2|Name=mRNA_P-littoralis_Contig982.2.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=448bp
MVAAVRLLLDGDDLGDGGRSFQRLFSFWPRSIANVAQLSFLLASLPPFPR
SLIDFPAAVKWPSPLWSSCLSALQLESPEGSYSSSRGAQSWQLQQGFLEQ
QVKEAHRRDCAACRQRTKERKQARQQEKERVAQTKEREQARQQEKERVTQ
DEERVVRAKKERKEDSEKLERERERAAAEKAREDKDELQCKLATLEAERR
VQQAEIKAAARAKAETQKLERRLARVQADRERLRDQLKKADPPSRDHLRR
KSTQQQQPVQRAAITVHDVMETGPFSHDALKEIASPIHGKGLGTKVAFVE
GDTILTVLLPDVEVPVGYDRKGGGYTCMGHIMHTDGLGALVIDPSKTMRG
TIPACRAFMEIGLLRLLNHSLTPNAKLQIGGGGERMKPWWYERAGGVEYG
WWYECSIVARADIAVGAEVTIEYADPPEEAVRPQPPKRASKRSRRRY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR046341SET_dom_sf
IPR001214SET_dom