prot_P-littoralis_Contig98.94.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig98.94.2
Unique Nameprot_P-littoralis_Contig98.94.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length669
Homology
BLAST of mRNA_P-littoralis_Contig98.94.2 vs. uniprot
Match: D8LT38_ECTSI (B box-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT38_ECTSI)

HSP 1 Score: 722 bits (1864), Expect = 3.140e-243
Identity = 423/676 (62.57%), Postives = 500/676 (73.96%), Query Frame = 0
Query:    1 EFFAKKTKRKGRWRVYVARMRVGGALIRLRTALLKQRKRETQHEKAVEAFRNARAKGGVTAEHREELQQMSRKAKRAVKRQEEERKKARFGAAKTAQDALETLTGPFRLRKAVRSALNRGMLLPFPVSVQRGKAIARLERGQNMREVLKWMPRGRRVRVEPKEYFSEL------SSVAPRRFGPPSHALGPFSVLGVKESQQKDSK-----AAAATASXAAATFSGMSVLKGTTGKSN---QQTPAPGIG-GGTAVXXXXXXXXAVS--ALSCPLLVLDRQWLLPEASGCQAFAMPVLPLPQQILMVLGKAIRDTFLVQATIKVAVVGAHQHRDRLMRWQQTNFDDDSAMHERLGRWAEESEALSQKAMLRRRCLFDVEKGFDEEKQKAMQAVEYVLSLWTSLQNMTDFAKSAAATGLVSKQGGKGKGIVGGKLGREVVMQLFKKWVRSDDRVKVIIMHRSGKAADDPAIEVVQVVGYINIDLDTPTPVLREFIRRFCGGWLNEHAKGERFAMENSTGGIVRRSREGEKFTATAMDMVQERVNKSTRNTEAVVFIQSERKREDPDAGVEAVLIPEKHLLDPEWTSKFDDESSTEGEADEDGGXDGKAKAARKNRRGDDQERRGQRGEEGGDVNHEESSSLSSDHFSASIGSMGSDLEEHEEDPFVAMEKDLQAQKD 659
            EFFAKKTKRKGRW+V+ AR+R+GG LIRLR    KQRK E   +KAV  +++ARAKGGV+A H+EELQQ+SRKAKRAV+  ++ER+KA     K A++ALE L GPFRLR  VR+A+  GML+PFPVS+Q+GKA ARLE+GQNMREVLKWMP GRRVRVEP +  S        +   PR   PPSHA GPF V+GVKES+Q D K     AA+A A   A+   G +  +  TG  +     TPA  IG GGTA          V   A S P+L+LDRQWLL EA  CQA+AMP+LP+ Q+ILMVL   IRD+ +VQ  IKVAVVG HQHRDRL RWQ T FDDDS MH RL RWA  SE  S++ MLRRR LFDVE+GF  EK++ M+AVE VL+LWTSLQ MTDFAKSAAATGL S QG  GKG++GGKLGREVV+QLFKKWV+SDDR KVIIMHRSGKAA++PA+EVVQVVGYI +DLDTPTPVLREFIRR+CGGWLNEHAKG+ F ME++TG IVRR+REG K  ATAMDMVQER+NK+TR+TE+V+F++ ER R DPDA VE VLIPEK  LDPE T  F+D  +   E +++G  D  AK ARK  R +D    G   + GG      SS  SSD FSASIGSMGSDLEE E+DPF AM+KDLQ +KD
Sbjct:  718 EFFAKKTKRKGRWKVHAARLRLGGELIRLRMESRKQRKYERLRDKAVGVYQHARAKGGVSAAHKEELQQISRKAKRAVQNHQQEREKAEE-RVKAAENALEALIGPFRLRNNVRAAVTEGMLMPFPVSMQKGKANARLEKGQNMREVLKWMPYGRRVRVEPTDPSSVYLLPEAEAGACPR---PPSHAFGPFYVVGVKESRQNDKKDKAAAAASALAGNLASKEPGDTKERPATGLGSGAAATTPAESIGEGGTAAGADGGEDSVVDLKAQSSPVLILDRQWLLEEAPLCQAYAMPILPVIQKILMVLRTGIRDSSVVQVAIKVAVVGTHQHRDRLERWQ-TKFDDDSDMHARLERWAAGSEDRSKRLMLRRRKLFDVEEGFQPEKRRVMEAVESVLALWTSLQEMTDFAKSAAATGLASTQGADGKGMIGGKLGREVVVQLFKKWVQSDDRTKVIIMHRSGKAANEPAVEVVQVVGYIKVDLDTPTPVLREFIRRYCGGWLNEHAKGDHFVMEDTTGEIVRRNREGGKLNATAMDMVQERINKTTRDTESVIFVRDERSRTDPDAEVELVLIPEKDFLDPESTPTFEDGVNAHEEGNDNGDGDVDAKGARKKHREEDGADGGDESDAGG-----RSSDFSSDQFSASIGSMGSDLEEDEDDPFAAMQKDLQDEKD 1383          
BLAST of mRNA_P-littoralis_Contig98.94.2 vs. uniprot
Match: A0A6H5KFP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP2_9PHAE)

HSP 1 Score: 541 bits (1394), Expect = 5.930e-182
Identity = 353/676 (52.22%), Postives = 423/676 (62.57%), Query Frame = 0
Query:   49 AFRNARAKGGVTAEHREELQQMSRKAKRAVKRQEEERKKARFGAAKTAQDALETLTGPFRLRKAVRSALNRGMLLPFPVSVQRGKAIARLERGQNMRE-----------------VLKWMPRGRRVRVEPKE-----YFSELSSVAPRRFGPPSHALGPFSVLGVKESQQKDSKAAAATASXAAATFSGMSVLKGTTGKSNQQTPAPGIGGGTAVXXXXXXXXAVSALSCPLLVLDRQWLLPEASGCQAFAMPVLPLPQQILMVLGKAIRDTFLVQATIKVAVVGAHQHRDRLMRWQQTNFDDDSAMHERLGRWAEESEALSQKAMLRRRCLFDVEKGFDEEKQKAMQAVEYVLSLWT----------------------------------------SLQNMTDFAKSAAATGLVSKQGGKGKGIVGGKLGREVVMQLFKKWVRSDDRVKVIIMHRSGKAADDPAIEVVQVVGYINIDLDTPTPVLREFIRRFCGGWLNEHAKGERFAMENSTGGIVRRSREGEKFTATAMDMVQERVNKSTRNTEAVVFIQSERKREDPDAGVEAVLIPEKHLLDPEWTSKFDDE-SSTEGEADEDGGXDGKAKAARKNRRGDDQERRGQRGEEGGDVNHEE--SSSLSSDHFSASIGSMGSDLEEHEEDPFVAMEKDLQAQKD 659
            A ++ARAKGGV+A+H++ELQQ SRKAKRAV+ QE+ER+KA     K A++ALE L GPFRLR  VR+A+ +GML+PFPVS+Q+GKA ARLE+GQNMRE                 VLKWMP GRRVRVEP +     +  E  + A  R  PPSHA GPF V+GVKES+Q D K  AA  +  A   +  S   G T    ++ PA G+G G A              + P   +D       A G +     +      I   L  A  D                         +QT FDDDS MH RL RWA  SEA S++ MLRRR LFDVE+GF  EK++ M+AVE VL+LWT                                        SLQ MTDFAKSAAATGL S QG  GKGI+GGKLGREVV+QLFKKWV+SDDR KVIIMHRSGKAA++PA+EVVQVVGYI +DLDTPTPVLREFIRRFCGGWLNEHAKG+ F ME++TG +VRR+REG K  ATAMDMVQER+NK+TR+TE+V+F+Q ER R DPDA VE VLIPEK  LDPE T  F+D  ++ EGE D  G  D  A+ ARK  R +D       G +GGD  + +  SS +SSD FSASIGSMGSDLEE E+DPF AM+KDLQ +KD
Sbjct:   33 ARQHARAKGGVSADHKDELQQNSRKAKRAVQNQEQEREKAEE-RVKAAENALEALIGPFRLRNNVRAAVTKGMLMPFPVSMQKGKANARLEKGQNMREASDAAICDSVLSCVVCSVLKWMPYGRRVRVEPTDPSSVYFLPEAGTRACPR--PPSHAFGPFYVVGVKESRQSDKKEKAAATAALALAENLASKEPGDT----RERPATGLGSGAAA-------------TTPAESIDEGGTAVGADGGEDSLGDLKSHAPSIFGFLNTAFSDR------------------------EQTKFDDDSNMHARLERWAAGSEAWSKRLMLRRRKLFDVEEGFQPEKRRVMEAVESVLALWTRILQPACRGDLRVWRSRRNMKTDETVATFSLALFGGTLNPSLQEMTDFAKSAAATGLASTQGADGKGIIGGKLGREVVVQLFKKWVQSDDRTKVIIMHRSGKAANEPAVEVVQVVGYIKVDLDTPTPVLREFIRRFCGGWLNEHAKGDHFVMEDATGTVVRRNREGGKQNATAMDMVQERINKATRDTESVIFVQDERSRTDPDAEVELVLIPEKDFLDPESTPTFEDGVNADEGEKDH-GDGDVDAQGARKKHREED-------GADGGDERYADGRSSDVSSDQFSASIGSMGSDLEEDEDDPFAAMQKDLQDEKD 656          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig98.94.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LT38_ECTSI3.140e-24362.57B box-type domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5KFP2_9PHAE5.930e-18252.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 60..87
NoneNo IPR availableCOILSCoilCoilcoord: 647..667
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 565..668
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 582..621
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 637..668

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig98contigP-littoralis_Contig98:459223..467165 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig98.94.2mRNA_P-littoralis_Contig98.94.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig98 459223..467165 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig98.94.2 ID=prot_P-littoralis_Contig98.94.2|Name=mRNA_P-littoralis_Contig98.94.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=669bp
EFFAKKTKRKGRWRVYVARMRVGGALIRLRTALLKQRKRETQHEKAVEAF
RNARAKGGVTAEHREELQQMSRKAKRAVKRQEEERKKARFGAAKTAQDAL
ETLTGPFRLRKAVRSALNRGMLLPFPVSVQRGKAIARLERGQNMREVLKW
MPRGRRVRVEPKEYFSELSSVAPRRFGPPSHALGPFSVLGVKESQQKDSK
AAAATASSAAATFSGMSVLKGTTGKSNQQTPAPGIGGGTAVAGGAAAAAA
VSALSCPLLVLDRQWLLPEASGCQAFAMPVLPLPQQILMVLGKAIRDTFL
VQATIKVAVVGAHQHRDRLMRWQQTNFDDDSAMHERLGRWAEESEALSQK
AMLRRRCLFDVEKGFDEEKQKAMQAVEYVLSLWTSLQNMTDFAKSAAATG
LVSKQGGKGKGIVGGKLGREVVMQLFKKWVRSDDRVKVIIMHRSGKAADD
PAIEVVQVVGYINIDLDTPTPVLREFIRRFCGGWLNEHAKGERFAMENST
GGIVRRSREGEKFTATAMDMVQERVNKSTRNTEAVVFIQSERKREDPDAG
VEAVLIPEKHLLDPEWTSKFDDESSTEGEADEDGGGDGKAKAARKNRRGD
DQERRGQRGEEGGDVNHEESSSLSSDHFSASIGSMGSDLEEHEEDPFVAM
EKDLQAQKDEEEEMKRKN*
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