prot_P-littoralis_Contig98.75.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig98.75.4
Unique Name	prot_P-littoralis_Contig98.75.4
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	657

Homology

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BLAST of mRNA_P-littoralis_Contig98.75.4 vs. uniprot
Match: A0A6H5KI11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI11_9PHAE)

HSP 1 Score: 461 bits (1185), Expect = 1.060e-154
Identity = 226/228 (99.12%), Postives = 227/228 (99.56%), Query Frame = 0

Query:    1 MSASIEQRNQDATCYTGNLDASVTEALLWELMIQAGPVANVHMPKDKITGVHQGFGFVEFRSEDDAEYAIKIMNMVKLFGKPLRVNKASQDRKANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEGSAPAAGGTGGM 228
            MSASIEQRNQDATCYTGNLD+SVTEALLWELMIQAGPVANVHMPKDKITGVHQGFGFVEFRSEDDAEYAIKIMNMVKLFGKPLRVNKASQDRKANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEGSAPAAGG GGM
Sbjct:    1 MSASIEQRNQDATCYTGNLDSSVTEALLWELMIQAGPVANVHMPKDKITGVHQGFGFVEFRSEDDAEYAIKIMNMVKLFGKPLRVNKASQDRKANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEGSAPAAGGNGGM 228

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BLAST of mRNA_P-littoralis_Contig98.75.4 vs. uniprot
Match: D8LT41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT41_ECTSI)

HSP 1 Score: 461 bits (1185), Expect = 9.960e-153
Identity = 226/228 (99.12%), Postives = 227/228 (99.56%), Query Frame = 0

Query:    1 MSASIEQRNQDATCYTGNLDASVTEALLWELMIQAGPVANVHMPKDKITGVHQGFGFVEFRSEDDAEYAIKIMNMVKLFGKPLRVNKASQDRKANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEGSAPAAGGTGGM 228
            MSASIEQRNQDATCYTGNLD+SVTEALLWELMIQAGPVANVHMPKDKITGVHQGFGFVEFRSEDDAEYAIKIMNMVKLFGKPLRVNKASQDRKANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEGSAPAAGG GGM
Sbjct:    1 MSASIEQRNQDATCYTGNLDSSVTEALLWELMIQAGPVANVHMPKDKITGVHQGFGFVEFRSEDDAEYAIKIMNMVKLFGKPLRVNKASQDRKANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEGSAPAAGGNGGM 228

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BLAST of mRNA_P-littoralis_Contig98.75.4 vs. uniprot
Match: A0A835YPU5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPU5_9STRA)

HSP 1 Score: 367 bits (942), Expect = 1.940e-117
Identity = 173/217 (79.72%), Postives = 194/217 (89.40%), Query Frame = 0

Query:    1 MSASIEQRNQDATCYTGNLDASVTEALLWELMIQAGPVANVHMPKDKITGVHQGFGFVEFRSEDDAEYAIKIMNMVKLFGKPLRVNKASQDRKANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEG 217
            MSA+IEQRNQDATCY GNLD + TE LLWELMIQAGPV NVHMPKDK+T  HQG+GFVEFRSE+DAEYAIKI+NMVKLFGKPLRVNKAS DRKA DVGANLFIGQLDP+VDEK+LYDTFSAFGFIT TPKVMRDP+TG SKGYGFVSYDGFEASD AIECM+ Q+LCNRQI VQYA+K+D+ GERHG  AERLLA+NNP + K HT+F+   G+++G
Sbjct:    1 MSAAIEQRNQDATCYCGNLDEAATEELLWELMIQAGPVVNVHMPKDKVTNTHQGYGFVEFRSEEDAEYAIKILNMVKLFGKPLRVNKASSDRKAQDVGANLFIGQLDPEVDEKLLYDTFSAFGFITNTPKVMRDPETGASKGYGFVSYDGFEASDLAIECMNGQFLCNRQIVVQYAFKRDSHGERHGSLAERLLAANNPLRLKPHTMFASQEGEVQG 217

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BLAST of mRNA_P-littoralis_Contig98.75.4 vs. uniprot
Match: F0YAQ8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAQ8_AURAN)

HSP 1 Score: 345 bits (884), Expect = 3.980e-110
Identity = 157/218 (72.02%), Postives = 186/218 (85.32%), Query Frame = 0

Query:    5 IEQRNQDATCYTGNLDASVTEALLWELMIQAGPVANVHMPKDKITGVHQGFGFVEFRSEDDAEYAIKIMNMVKLFGKPLRVNKASQDRKANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEGSAPAA 222
            +EQRNQDATCY GNLD  +TE LLWE+M+QAGP+ NVH+P+DK+TG HQG+GFVEFRSE+DA+YA+K+MNMVKLFGKPLRVNKASQD+K  +VGANLF+G LD DVDEK+LYDTFSAFG IT+TPK+MRDPDTG SKG+GFVSYD FEASD AIECMHNQ+LCN+Q+ V YA+K+D++ ERHG QAERLLA+NNP   K H +F   PG   G   AA
Sbjct:    6 VEQRNQDATCYVGNLDEQLTEELLWEMMLQAGPIGNVHLPRDKVTGSHQGYGFVEFRSEEDADYALKVMNMVKLFGKPLRVNKASQDKKTLEVGANLFVGGLDVDVDEKLLYDTFSAFGTITETPKIMRDPDTGNSKGFGFVSYDSFEASDLAIECMHNQFLCNKQVQVGYAFKRDSKTERHGSQAERLLAANNPMSAKPHAMFGTGPGDAMGGGYAA 223

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BLAST of mRNA_P-littoralis_Contig98.75.4 vs. uniprot
Match: A0A7S3ZVH1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVH1_9STRA)

HSP 1 Score: 338 bits (866), Expect = 2.860e-108
Identity = 157/219 (71.69%), Postives = 189/219 (86.30%), Query Frame = 0

Query:    5 IEQRNQDATCYTGNLDASVTEALLWELMIQAGPVANVHMPKDKITGVHQGFGFVEFRSEDDAEYAIKIMNMVKLFGKPLRVNKASQDRKANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSK-FKVHTLFSVAPGKIEGSAPAA 222
            +EQRNQDATCY GNLD  +TE LLWE+M+QAGPV+NVH+P+DK+TG HQG+GFVEFRSE+DA+YA+K+MNMVKLFGKPLRVNKASQDR+A +VGANLF+G LD DVDEK+LYDTFSAFG I++TPKVMRDPDTG SKGYGFVSYD FEASD AIECMH Q+LCN+Q+ V YA+K+D++ ERHG QAERLLA+NNP+   + HT+F      + G+  AA
Sbjct:    6 VEQRNQDATCYVGNLDEQLTEELLWEMMLQAGPVSNVHLPRDKVTGSHQGYGFVEFRSEEDADYALKVMNMVKLFGKPLRVNKASQDRRAVEVGANLFVGGLDGDVDEKLLYDTFSAFGTISETPKVMRDPDTGGSKGYGFVSYDSFEASDLAIECMHGQFLCNKQVQVGYAFKRDSKTERHGSQAERLLAANNPNNAVQPHTMFGTGAPAVAGAFSAA 224

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BLAST of mRNA_P-littoralis_Contig98.75.4 vs. uniprot
Match: A0A2H5NRF6_CITUN (Uncharacterized protein n=1 Tax=Citrus unshiu TaxID=55188 RepID=A0A2H5NRF6_CITUN)

HSP 1 Score: 330 bits (847), Expect = 1.800e-105
Identity = 156/223 (69.96%), Postives = 188/223 (84.30%), Query Frame = 0

Query:    7 QRNQDATCYTGNLDASVTEALLWELMIQAGPVANVHMPKDKITGVHQGFGFVEFRSEDDAEYAIKIMNMVKLFGKPLRVNKASQDRKANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPS--KFKVHTLFSVAPGKIEGSAPAAGGTGG 227
            +RNQDAT Y GNLD  VTE LLWEL +QAGPV NV++PKD++T +HQG+GFVEFRSE+DA+YAIK++NM+KL+GKP+RVNKASQD+K+ DVGANLFIG LDPDVDEK+LYDTFSAFG I   PK+MRDPDTG S+G+GF+SYD FEASD AIE M+ QYLCNRQI+V YAYKKDT+GERHG  AER+LA+NNPS  K + HTLF+  P  ++ +AP   GT G
Sbjct:   20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQ-NAPQVNGTVG 241

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BLAST of mRNA_P-littoralis_Contig98.75.4 vs. uniprot
Match: A0A7S2SH37_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SH37_9STRA)

HSP 1 Score: 330 bits (845), Expect = 2.000e-105
Identity = 157/214 (73.36%), Postives = 182/214 (85.05%), Query Frame = 0

Query:    1 MSASIEQRNQDATCYTGNLDASVTEALLWELMIQAGPVANVHMPKDKITGVHQGFGFVEFRSEDDAEYAIKIMNMVKLFGKPLRVNKASQDRKANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNP--SKFKVHTLFSVAP 212
            MSA+IEQRNQDATCY GNLD  V E LLWELM+QAGPV ++HMPKDK+T  HQGFGFVEFRSE+DA+YAIKIMNMVKLF KP+RVNKASQDRK  DVGANLFIG LD  VDEK+LYDTFSAFG +T  PKVMRDPDTG+SKG+GFVSYD FEA+D AIECM+ Q+L NR I VQ+A+K+D++GERHG QAER+LA+NNP   +   HT+F+  P
Sbjct:    1 MSAAIEQRNQDATCYCGNLDDQVEEELLWELMLQAGPVVSLHMPKDKVTNSHQGFGFVEFRSEEDADYAIKIMNMVKLFDKPIRVNKASQDRKTMDVGANLFIGNLDAQVDEKLLYDTFSAFGGLTDQPKVMRDPDTGLSKGFGFVSYDSFEAADLAIECMNGQFLSNRAIQVQFAFKRDSQGERHGSQAERMLAANNPLARRMAPHTMFAAGP 214

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BLAST of mRNA_P-littoralis_Contig98.75.4 vs. uniprot
Match: A0A067GIM3_CITSI (Uncharacterized protein n=4 Tax=Citrus TaxID=2706 RepID=A0A067GIM3_CITSI)

HSP 1 Score: 332 bits (851), Expect = 8.230e-105
Identity = 157/223 (70.40%), Postives = 189/223 (84.75%), Query Frame = 0

Query:    7 QRNQDATCYTGNLDASVTEALLWELMIQAGPVANVHMPKDKITGVHQGFGFVEFRSEDDAEYAIKIMNMVKLFGKPLRVNKASQDRKANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPS--KFKVHTLFSVAPGKIEGSAPAAGGTGG 227
            +RNQDAT Y GNLD  VTE LLWEL +QAGPV NV++PKD++T +HQG+GFVEFRSE+DA+YAIK++NM+KL+GKP+RVNKASQD+K+ DVGANLFIG LDPDVDEK+LYDTFSAFG I   PK+MRDPDTG S+G+GF+SYD FEASD AIE M+ QYLCNRQI+V YAYKKDT+GERHG  AER+LA+NNPS  K + HTLF+  P  ++ +AP A GT G
Sbjct:   20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQ-NAPQANGTVG 241

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BLAST of mRNA_P-littoralis_Contig98.75.4 vs. uniprot
Match: A0A5C7GWE5_9ROSI (Uncharacterized protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7GWE5_9ROSI)

HSP 1 Score: 330 bits (847), Expect = 2.860e-104
Identity = 157/235 (66.81%), Postives = 191/235 (81.28%), Query Frame = 0

Query:    7 QRNQDATCYTGNLDASVTEALLWELMIQAGPVANVHMPKDKITGVHQGFGFVEFRSEDDAEYAIKIMNMVKLFGKPLRVNKASQDRKANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPS--KFKVHTLFSVAPGKIEGSAPAAGGTGGMRGGPPPLPPPP 239
            +RNQDAT Y GNLD  VTE LLWEL +QAGPV NV++PKD++T +HQG+GFVEFRSE+DA+YAIK++NM+KL+GKP+RVNKASQD+K+ DVGANLFIG LDPDVDEK+LYDTFSAFG I   PK+MRDP+TG S+G+GF+SYD FEASD AIE M+ QYLCNRQI+V YAYKKDT+GERHG  AER+LA+NNP   K + HTLF++ P  ++    A G  GG      P+PP P
Sbjct:   20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPGSQKSRPHTLFAIGPPSLQNVPQANGSVGG------PVPPRP 248

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BLAST of mRNA_P-littoralis_Contig98.75.4 vs. uniprot
Match: A0A6A4C3Q0_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4C3Q0_9STRA)

HSP 1 Score: 326 bits (836), Expect = 2.940e-104
Identity = 151/213 (70.89%), Postives = 181/213 (84.98%), Query Frame = 0

Query:    1 MSASIEQRNQDATCYTGNLDASVTEALLWELMIQAGPVANVHMPKDKITGVHQGFGFVEFRSEDDAEYAIKIMNMVKLFGKPLRVNKASQDRKANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPG 213
            MSA+IEQRNQDAT Y GNLD  V+E LLWELM+QAG V NVHMP+DK+TG HQ +GFVEFR+E+ AEYA+K++NMV+LFGKP+RV KAS DRK  DVGANLF+G LDP+VDEK+LYDTFSAFG I +TPKVMRDPD+  S+G+GFVS+D FEA+D AIECMH QYLCNRQ+ VQ+A+KKD+R ERHG +AERLLA  NP K + HT+F+  PG
Sbjct:    1 MSAAIEQRNQDATVYVGNLDDRVSEELLWELMLQAGSVCNVHMPRDKVTGSHQNYGFVEFRAEECAEYAVKVLNMVQLFGKPVRVKKASSDRKNVDVGANLFLGNLDPEVDEKLLYDTFSAFGGIVETPKVMRDPDSQASRGFGFVSFDSFEAADLAIECMHGQYLCNRQVVVQFAFKKDSRNERHGSEAERLLAQRNPDKLQPHTMFAFTPG 213

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig98.75.4 vs. uniprot

BLAST of mRNA_P-littoralis_Contig98.75.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KI11_9PHAE	1.060e-154	99.12	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LT41_ECTSI	9.960e-153	99.12	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835YPU5_9STRA	1.940e-117	79.72	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
F0YAQ8_AURAN	3.980e-110	72.02	Uncharacterized protein n=1 Tax=Aureococcus anopha...	[more]
A0A7S3ZVH1_9STRA	2.860e-108	71.69	Hypothetical protein (Fragment) n=1 Tax=Pelagomona...	[more]
A0A2H5NRF6_CITUN	1.800e-105	69.96	Uncharacterized protein n=1 Tax=Citrus unshiu TaxI...	[more]
A0A7S2SH37_9STRA	2.000e-105	73.36	Hypothetical protein (Fragment) n=1 Tax=Rhizochrom...	[more]
A0A067GIM3_CITSI	8.230e-105	70.40	Uncharacterized protein n=4 Tax=Citrus TaxID=2706 ...	[more]
A0A5C7GWE5_9ROSI	2.860e-104	66.81	Uncharacterized protein n=1 Tax=Acer yangbiense Ta...	[more]
A0A6A4C3Q0_9STRA	2.940e-104	70.89	Uncharacterized protein n=3 Tax=Phytophthora TaxID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 13..86 e-value: 1.9E-21 score: 87.2 coord: 100..174 e-value: 1.4E-21 score: 87.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 101..171 e-value: 8.6E-16 score: 57.5 coord: 17..83 e-value: 2.3E-14 score: 53.0
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 12..90 score: 16.278412
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 99..178 score: 15.732639
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 98..187 e-value: 2.4E-23 score: 84.3
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 3..97 e-value: 8.2E-24 score: 85.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 360..656
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 496..524
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 360..412
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..317
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..342
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 426..451
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 632..646
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 603..619
None	No IPR available	PANTHER	PTHR15241	TRANSFORMER-2-RELATED	coord: 6..323
None	No IPR available	PANTHER	PTHR15241:SF330	SPLICING FACTOR 3B SUBUNIT 4	coord: 6..323
IPR034158	SF3B4, RNA recognition motif 1	CDD	cd12334	RRM1_SF3B4	coord: 14..87 e-value: 5.98759E-49 score: 163.534
IPR034159	SF3B4, RNA recognition motif 2	CDD	cd12335	RRM2_SF3B4	coord: 98..180 e-value: 3.92319E-54 score: 177.487
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 11..182

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig98	contig	P-littoralis_Contig98:392552..401268 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig98.75.4	mRNA_P-littoralis_Contig98.75.4	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig98 390680..402407 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig98.75.4 ID=prot_P-littoralis_Contig98.75.4|Name=mRNA_P-littoralis_Contig98.75.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=657bp
MSASIEQRNQDATCYTGNLDASVTEALLWELMIQAGPVANVHMPKDKITG
VHQGFGFVEFRSEDDAEYAIKIMNMVKLFGKPLRVNKASQDRKANDVGAN
LFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDG
FEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPS
KFKVHTLFSVAPGKIEGSAPAAGGTGGMRGGPPPLPPPPGSAPPLPPLPP
GMPPPPPPSPGMPPLPPGSLMPGYGGPPPPPGGETGRNMMPQRMPPPPPP
PGYGGGGGYPPPQHMPPQHMMHGRMGMGGRGGGHHGMGMPMGMQRGGGYG
MYGGRPPPPMMGMPPPPPNMNMGQPPPLPPSIGGGGNQPPPPPPSSSATA
APPPPPPLPSPATAEAGAGAGAGAGGGGPPPPPRAASSNGGGPPPPPPDQ
QSRSQEGNGPPHRGGGQEQGRGGPPPPPPQREMGGGGGGGGAGPAGREGP
PPPPPVSREGRGSPPPPPPPMSHQQRNDGPGAGRSGGGGGGGPGAPPEGR
PNSLTRPNMPPLQQQMMMMGGPRGGPGMGMGMGGRGGGPGGRGMMPPPPQ
QQQGMAGGGPPPPPRGFPPQQQQQQQGPGGPGMGRGPPPPPPPGGRDNMQ
QQDSRQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR034158	SF3B4_RRM1
IPR034159	SF3B4_RRM2
IPR035979	RBD_domain_sf