mRNA_P-littoralis_Contig122.116.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig122.116.2 vs. uniprot
Match: D8LLI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI1_ECTSI) HSP 1 Score: 445 bits (1145), Expect = 2.090e-152 Identity = 236/292 (80.82%), Postives = 255/292 (87.33%), Query Frame = 1
Query: 19 VAACWVSGTQAFVVPGAPMASVSAQQGA------AAATSMRMAAGEG---SPCSRSEALGTLGAALLGAAVVGTGVPAPASAASLAEANKKLSQFDLPPVVNVPDGFNTLVEGYGKDGALKNSLGSSNRDPILVTWNYPKGWVVSRPNTDTNKEAGTVSTGDYGRGDSATLFVGPKSLIGGSSLSNKETMEGVVKKALSQKGENQFQSFKLKSVKDGATDFASNKYYIADFQYELLTGAGFTVERKGVASVAQVGNSVNAVVGATTANRAKTVKPQLQEIAGSFRVYEGKFD 867
VAACW G AF+ PG P+ VSA+Q + AA T M ++ EG S CSRSEAL T GAA+LGA VVGTGVPAPASA S+AEANK+LS+++LPPVV+VP GFNTL+EGYGKDGALKNSLGSSNRDPILVTWNYPKGW+V RPNTDTNKEAGTVSTGDYGRGDSA LFV PKSLIGGSSLS+K+TMEGV+KKALSQKGENQFQSFKLKSVKDG TDF NKYYIADFQYELLTGAGFTVERKGVASV Q+GNSVNAVVGATTANRAKTVKPQLQEIA SFRVYEGKFD
Sbjct: 7 VAACWAGGINAFITPGVPVVPVSARQASSSSGRVAATTRMGVSDREGLASSACSRSEALSTFGAAVLGAVVVGTGVPAPASAGSVAEANKRLSEYNLPPVVDVPGGFNTLLEGYGKDGALKNSLGSSNRDPILVTWNYPKGWIVQRPNTDTNKEAGTVSTGDYGRGDSAGLFVAPKSLIGGSSLSSKDTMEGVLKKALSQKGENQFQSFKLKSVKDGETDFNGNKYYIADFQYELLTGAGFTVERKGVASVTQIGNSVNAVVGATTANRAKTVKPQLQEIARSFRVYEGKFD 298
BLAST of mRNA_P-littoralis_Contig122.116.2 vs. uniprot
Match: A0A835Z8Y2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Y2_9STRA) HSP 1 Score: 210 bits (535), Expect = 9.090e-61 Identity = 134/289 (46.37%), Postives = 175/289 (60.55%), Query Frame = 1
Query: 16 TVAACWVSGTQAFVVPGAPMASVSAQQGAAAATSMRMAAGEGS------PCSRSEALGTLGAALLGAAVVGTGVPAPASAASLAEANKKLSQFDLPPVVNVPDGFNTLVEGYGKDGALKNSLGSSNRDPILVTWNYPKGWVVSRPNTDTNKEAGTVSTGDYGRGDSATLFVGPKSLIGGSSLS--NKETMEGVVKKALSQKGENQFQSFKLKSVKDGATDFASNKYYIADFQYELLTGAGFTVERKGVASVAQVGNSVNAVVGATTANRAKTVKPQLQEIAGSFRVYEG 858
T+AAC Q FVVP A S +AQ+ A ++M+A G SR +A+ AA+ AA V P PASA L N +L+ + LP V PDG L+E YG+D NR+ +LVTWNYP GW+ RP+ DTN E GTV+TGDY +GDSA L V P ++GG LS NK +E +V ++++QKG NQ Q+FKLK V +GAT +Y +F+Y+LLTGAGF VER G S+ QVG V +V+ TTA R K ++P+LQEIA SFRVY+G
Sbjct: 12 TLAAC----AQGFVVPCAVRHSAAAQRSA-----LQMSAQPGDVTAAPQQVSRRQAMVAASAAI--AAAVLMQEPQPASALGLKAVNARLADYGLPGVGKPPDGMKALLEIYGRD---------QNRETLLVTWNYPNGWITQRPSLDTNSEDGTVATGDYQKGDSAFLVVQPLDVLGGEKLSATNKALVEKLVLQSITQKGANQIQNFKLKKVTEGATGAKGQQYINVEFKYDLLTGAGFIVERVGYGSLTQVGKGVQSVMAVTTAARLKKLQPKLQEIATSFRVYDG 280
BLAST of mRNA_P-littoralis_Contig122.116.2 vs. uniprot
Match: A0A7S2V7M0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7M0_9STRA) HSP 1 Score: 176 bits (447), Expect = 9.510e-48 Identity = 106/250 (42.40%), Postives = 152/250 (60.80%), Query Frame = 1
Query: 151 SRSEAL---GTLGAALLGAAVVGTGVPAPASAASLAEANKKLSQFDLPPVV-NVPDGFNTLVEGYGKDGALKNSLGSSNRDPILVTWNYPKGWVVSRPNTDTNKEAGTVSTGDYGRGDSATLFVGPKSLIGGSSLSN-KETMEGVVKKALSQKGENQFQSFKLKSVKDGATDFASNKYYIADFQYELLTGAGFTVERKGVASVAQVGNSVNAVVGATTANRAKTVKPQLQEIAGSFRVYEGKFD*LTFCL 885
SR EA+ G A++ A V+G+ P A A S+ EAN +L+ + + P NVP GF+ LVE +GKDG R P L+++ YP WV+ +P+ TN E+GT + G+Y +GDSA ++VGP + G ++ K+ + +V L+QKGENQ+Q+FK + GAT KYY+ DF+YELLTGAGF ++R+GVA+V +V A+V ATT R K + L IA SFR Y+GK L++ L
Sbjct: 58 SRREAIINAGQAAGAIMIAGVLGSS-PQSAEAKSIKEANNELTNYGVSPFEGNVPQGFSPLVEVWGKDGI---------RPPYLISFLYPALWVIQKPSMTTNGESGTYAAGNYQKGDSAAVYVGPSEVDGNDVMAKGKDYISSIVLGGLTQKGENQYQNFKTTKIVAGATGLKGQKYYVVDFKYELLTGAGFYIDRRGVAAVTGTPKNVQAIVCATTDTRYKKLADDLHVIADSFRAYDGKILGLSYNL 297
BLAST of mRNA_P-littoralis_Contig122.116.2 vs. uniprot
Match: A0A4D9DCV0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCV0_9STRA) HSP 1 Score: 171 bits (432), Expect = 1.710e-46 Identity = 97/215 (45.12%), Postives = 132/215 (61.40%), Query Frame = 1
Query: 214 GVPAPASAASLAEANKKLSQFDLPPVVNVPDGFNTLVEGYGKDGALKNSLGSSNRDPILVTWNYPKGWVVSRPNTDTNKEAGTVSTGDYGRGDSATLFVGPKSLIGGSSLSNKETMEGVVKKALSQKGENQFQSFKLKSVKDGATDFASNKYYIADFQYELLTGAGFTVERKGVASVAQVGNSVNAVVGATTANRAKTVKPQLQEIAGSFRVYEG 858
GV PA AA L++ N +L+ + LPP+++VP GF+ LVE YGK K R+ +LV + YP WVVS+P+ D N E GT+S GDY +GDSA +V G + + VV +A+ QK +N +Q+FK+ + GA +Y I +F+YELLTGAGFTV+RKGVASV QVG +V + ATTA R K + +A SFRVY+G
Sbjct: 13 GVVQPAQAAGLSKVNGELASYGLPPILDVPGGFSPLVEVYGKAAGAKKE-----RETLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFYVEEGPASGKLEQESADYFGEVVTRAIGQKSQNVYQNFKVLKKRPGAKGANGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNVQGLWVATTAARWKKIGNDCITMADSFRVYDG 222
BLAST of mRNA_P-littoralis_Contig122.116.2 vs. uniprot
Match: W7TXP4_9STRA (Uncharacterized protein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXP4_9STRA) HSP 1 Score: 173 bits (438), Expect = 2.960e-46 Identity = 98/215 (45.58%), Postives = 133/215 (61.86%), Query Frame = 1
Query: 214 GVPAPASAASLAEANKKLSQFDLPPVVNVPDGFNTLVEGYGKDGALKNSLGSSNRDPILVTWNYPKGWVVSRPNTDTNKEAGTVSTGDYGRGDSATLFVGPKSLIGGSSLSNKETMEGVVKKALSQKGENQFQSFKLKSVKDGATDFASNKYYIADFQYELLTGAGFTVERKGVASVAQVGNSVNAVVGATTANRAKTVKPQLQEIAGSFRVYEG 858
GV PA AA L++ N +L+ + LPP+++VP GF+ LVE YGK K R+ +LV + YP WVVS+P+ D N E GT+S GDY +GDSA +V G + + VVK+A+ QK +N +Q+FK+ + GA +Y I +F+YELLTGAGFTV+RKGVASV QVG +V + ATTA R K + +A SFRVY+G
Sbjct: 104 GVVQPAQAAGLSKVNSELAGYGLPPILDVPGGFSPLVEVYGKAAGAKKE-----RETLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFYVEEGPASGKLEQESADYFGEVVKRAIGQKSQNVYQNFKVLKKRPGAKGANGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNVQGLWVATTAARWKKIGNDCITMADSFRVYDG 313
BLAST of mRNA_P-littoralis_Contig122.116.2 vs. uniprot
Match: A0A6U3V0C4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3V0C4_9STRA) HSP 1 Score: 169 bits (429), Expect = 2.030e-45 Identity = 98/245 (40.00%), Postives = 142/245 (57.96%), Query Frame = 1
Query: 181 AALLGAAVVGTGVPAPASAASLAEANKKLSQFDLPPVVNVPDGFNTLVEGYGKDGALKNSLGSSNRDPILVTWNYPKGWVVSRPNTDTNKEAGTVSTGDYGRGDSATLFVGPKS-LIGGSSLSNKETMEGVVKKALSQKGENQFQSFKLKSVKDGATDFASNKYYIADFQYELLTGAGFTVERKGVASVAQVGNSVNAVVGATTANRAKTVKPQLQEIAGSFRVYEGKFD*LTFCLEYIV*SGYS 912
A ++G+ + T PA A L N KL+ + LPP+ NVP GF+ LVE YGK NR P+LV++ +P W+V+ P+ D N E GT+ G+Y +GD+AT ++ P S + S K+ + + +A+SQKG++ +Q FK+ V+ D+ + +Y I DF+Y LLTGAGF V+R+GVASV GN+V + A+T R K ++ L+ IAGSFRVY D L E I Y
Sbjct: 45 AGVVGSTFLQTAEPANAFGGGLKTCNAKLASYGLPPIANVPSGFSPLVEVYGK---------GRNRTPLLVSFVHPLDWIVTLPSQDVNGEDGTIQAGEYAKGDTATFYILPDSGKVDNISEQPKDFFKNAISRAISQKGDSIYQDFKITKVEPVKGDYNNQQYVICDFKYTLLTGAGFEVDRQGVASVTSEGNAVEVLWTASTRQRYKKLEEGLRSIAGSFRVYS---DGLNLSSERIAEPEYD 277
BLAST of mRNA_P-littoralis_Contig122.116.2 vs. uniprot
Match: A0A7S4MBN6_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MBN6_9STRA) HSP 1 Score: 167 bits (423), Expect = 2.040e-44 Identity = 98/241 (40.66%), Postives = 143/241 (59.34%), Query Frame = 1
Query: 157 SEALGTLGAALLGAAVVGTGVPAPASAASLAEANKKLSQFDLPPVVNVPDGFNTLVEGYGKDGALKNSLGSSNRDPILVTWNYPKGWVVSRPNTDTNKEAGTVSTGDYGRGDSATLFVGPK-SLIGGSSLSNKETMEGVVKKALSQKGENQFQSFKLKSVKDGATDFASNKYYIADFQYELLTGAGFTVERKGVASVAQVGNSVNAVVGATTANRAKTVKPQLQEIAGSFRVYEGKFD*LT 876
S A GAA+ + + G PA A + + N KL+ LP + +PDGF+ L E +GK +NR P+LV + +P WVV+ P+ D N E GT+ G+YG+GD++T FV + + + K E V++KA+SQK N +Q+FK+K+++ ++ Y I DFQY+L+TGAGF V+RK VASV GN+V A+ A+TA R K ++P L++IAGSFRVY D L
Sbjct: 49 SNAAAVAGAAMTSSFLQGPTEPALALGGGIKKVNAKLASLGLPEMKKLPDGFSPLCELWGK---------GANRFPLLVNFAHPLDWVVTTPSLDLNSEDGTIQAGEYGKGDTSTFFVYEEPGNVADIASQPKSFFEDVLQKAISQKSANIYQNFKVKNIQPTKGEYKDQTYVIVDFQYQLVTGAGFEVDRKAVASVTSQGNAVEALWCASTAIRYKKMEPALRDIAGSFRVYSDGLDMLV 280
BLAST of mRNA_P-littoralis_Contig122.116.2 vs. uniprot
Match: F0YP05_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YP05_AURAN) HSP 1 Score: 166 bits (420), Expect = 2.040e-44 Identity = 95/226 (42.04%), Postives = 143/226 (63.27%), Query Frame = 1
Query: 178 GAALLGAAVVGTGVPAPASAASLAEANKKLSQFDLPPVVNVPDGFNTLVEGYGKDGALKNSLGSSNRDPILVTWNYPKGWVVSRPNTDTNKEAGTVSTGDYGRGDSATLFVGPKSLIGGSSLSNKETMEGVVKKALSQKGENQFQSFKLKSVKDGATDFASNKYYIADFQYELLTGAGFTVERKGVASVAQVGNSVNAVVGATTANRAKTVKPQLQEIAGSFRVYE 855
GA+L+ A +V PAPA A LA+ N+KL + LPPV +PDGF+ ++ +D +L +V +N+P W+V +P+ +TN E+GTVS GDYG+GDSA L+V G + K ++ K L+QKG+NQFQ+F++++V G+ + + DF+YELLTGAGFTVER+GVA+V+ V A++ TT+ R K ++P+L++I SFRVY+
Sbjct: 37 GASLVAAGLVSL-APAPALAYDLAKYNRKLDKLGLPPVAGIPDGFSPVLSSVNQDQSL------------IVQFNHPNAWLVVKPSVNTNGESGTVSAGDYGKGDSAALYVSDLPPGGDKAFYAK-----LIAKGLAQKGDNQFQNFRVRAVSPGSPNA------VVDFEYELLTGAGFTVERRGVAAVSGVAGKSQALLAVTTSARYKKLEPELRKIVDSFRVYD 238
BLAST of mRNA_P-littoralis_Contig122.116.2 vs. uniprot
Match: A0A7R9WJF7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WJF7_9STRA) HSP 1 Score: 166 bits (419), Expect = 7.730e-44 Identity = 104/246 (42.28%), Postives = 145/246 (58.94%), Query Frame = 1
Query: 151 SRSEALGTLGAALLGAAVVGT---GVPAPASAASLAEANKKLSQFDLPPVVNVPDGFNTLVEGYGKDGALKNSLGSSNRDPILVTWNYPKGWVVSRPNTDTNKEAGTVSTGDYGRGDSATLFV-GPKSLIGGSSLSNKETMEGVVKKALSQKGENQFQSFKLKSVKDGATDFASNKYYIADFQYELLTGAGFTVERKGVASVAQVGNSVNAVVGATTANRAKTVKPQLQEIAGSFRVYEGKFD*LT 876
SR GT+GAA GA + G APA AA L++ N KL LP + VPDGF+ L+E +GK +NR P+LV + +P WVV+ P+ D N E GTV G+YG+GD+AT FV + + + K E V++KA+SQK N +Q+FK+ +++ + Y I DF+Y+L+TGAGF V+RK VASV G +V A+ A+TA R K ++P L++IA SFRVY D L
Sbjct: 45 SRRRFFGTVGAAA-GAVATSSLLQGPVAPAHAAKLSKVNAKLEALGLPAMGKVPDGFSPLLELWGK---------GANRFPLLVNFAHPLDWVVTTPSLDLNSEDGTVQAGEYGKGDTATFFVYEDEGNVADIASQPKSFFENVLQKAISQKSANIYQNFKVTNIQPTKGGYQDQTYMIVDFKYQLVTGAGFEVDRKAVASVTSQGKAVEALWCASTAVRYKKLEPALRDIASSFRVYSDGLDMLV 280
BLAST of mRNA_P-littoralis_Contig122.116.2 vs. uniprot
Match: A0A7S2RLR6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLR6_9STRA) HSP 1 Score: 163 bits (413), Expect = 4.720e-43 Identity = 104/229 (45.41%), Postives = 135/229 (58.95%), Query Frame = 1
Query: 187 LLGAAVVGTGVPAPASAASLAEAN---KKLSQFDLPPVVNVPDGFNTLVEGYGKDGALKNSLGSSNRDPILVTWNYPKGWVVSRPNTDTNKEAGTVSTGDYGRGDSATLFVGPKSLIGGSSLSN-KETMEGVVKKALSQKGENQFQSFKLKSVKDGATDFASNKYYIADFQYELLTGAGFTVERKGVASVAQVGN-SVNAVVGATTANRAKTVKPQLQEIAGSFRVYEG 858
L GA VPAP SLA N +++ + + PDGF+ +V YG+ +DP+LVT+N P GW+V RPN D N E GTVS+GDYG+GDSA LF+GP L GGS KE E +V ++QKGE+ Q FKL+ ++ + YY+ DF Y LLTGAGF V RKG SV VG+ SV A++GA+T R K +P L+E+A SFRVY G
Sbjct: 60 LAGALAAALAVPAP----SLAFGNDFQRQMQGYGIKDYKQAPDGFSPVVGFYGR--------AVPGQDPLLVTYNSPSGWLVVRPNIDNNGEDGTVSSGDYGKGDSAALFIGPP-LKGGSLADQPKEYFEKLVFAGVTQKGESMVQGFKLRKIQKLEAN-TETPYYLVDFTYTLLTGAGFEVNRKGTGSVTAVGDKSVQAMIGASTDVRFKKTEPLLREVAESFRVYGG 274 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig122.116.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig122.116.2 >prot_P-littoralis_Contig122.116.2 ID=prot_P-littoralis_Contig122.116.2|Name=mRNA_P-littoralis_Contig122.116.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=266bp MASVSAQQGAAAATSMRMAAGEGSPCSRSEALGTLGAALLGAAVVGTGVPback to top mRNA from alignment at P-littoralis_Contig122:343651..352925- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig122.116.2 ID=mRNA_P-littoralis_Contig122.116.2|Name=mRNA_P-littoralis_Contig122.116.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=9275bp|location=Sequence derived from alignment at P-littoralis_Contig122:343651..352925- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig122:343651..352925- >mRNA_P-littoralis_Contig122.116.2 ID=mRNA_P-littoralis_Contig122.116.2|Name=mRNA_P-littoralis_Contig122.116.2|organism=Pylaiella littoralis U1_48|type=CDS|length=798bp|location=Sequence derived from alignment at P-littoralis_Contig122:343651..352925- (Pylaiella littoralis U1_48)back to top |