prot_P-littoralis_Contig122.110.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig122.110.2
Unique Nameprot_P-littoralis_Contig122.110.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length222
Homology
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BLAST of mRNA_P-littoralis_Contig122.110.2 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 1.060e-10
Identity = 46/123 (37.40%), Postives = 64/123 (52.03%), Query Frame = 0 
Query:   58 DVGAAAPFVGPVFVALKRAKDMVGEMEQRREELADLHDQCTLITTRIIVRCNHYSNHDVDVKPLKACVDDIYDFAKVYNGQGKFKRMFKMKSDHGKIVKLKGRID------GLLVITAAEGYV 174
            D+G   P + PVF  LK  +  V  ++  REELA L  +CT IT   +V+C    + +VDV PLK CV+   +FA+  + +GK  R+ K  SD  +I  L   +D      GL  I   EG V
Sbjct:   32 DLGEELPVIKPVFKTLKAIRTTVETVKNNREELAALEQRCTYITACFVVKCRLIES-EVDVAPLKDCVEAAKNFAERCSRRGKVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGIAVLEGKV 153
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig122.110.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZW8_ECTSI1.060e-1037.40NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 73..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig122contigP-littoralis_Contig122:339174..340349 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig122.110.2mRNA_P-littoralis_Contig122.110.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig122 330501..342086 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig122.110.2 ID=prot_P-littoralis_Contig122.110.2|Name=mRNA_P-littoralis_Contig122.110.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=222bp
MEFLSAAPPPRMEPTGDVRRWTFQRANAAVRTAVWGLATSAVDVGAAAGG
FAADAVFDVGAAAPFVGPVFVALKRAKDMVGEMEQRREELADLHDQCTLI
TTRIIVRCNHYSNHDVDVKPLKACVDDIYDFAKVYNGQGKFKRMFKMKSD
HGKIVKLKGRIDGLLVITAAEGYVRTAEGIEGVRSEMALGFAELHREIAS
RPYAHTAPYASTHVSIRKPLS*
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