prot_P-littoralis_Contig1213.2.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1213.2.1
Unique Nameprot_P-littoralis_Contig1213.2.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length178
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1213.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 133..149
e-value: 0.0066
score: 24.7
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 133..148
e-value: 2.9E-5
score: 24.0
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 134..149
score: 9.570305
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 1..79
e-value: 1.1E-10
score: 41.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..178
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 129..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1213contigP-littoralis_Contig1213:7677..8210 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1213.2.1mRNA_P-littoralis_Contig1213.2.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1213 7677..8210 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1213.2.1 ID=prot_P-littoralis_Contig1213.2.1|Name=mRNA_P-littoralis_Contig1213.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=178bp
WLALRDKYQADDEQHRRALISELNNMSMKDGTDPDLFITEVWEVAFKLEE
LGEPVSRSRIADIILHGLPAAYDPLRLQAGMGSGFDLSKIEHTARRMYTS
RRRKVASNGHQGRQQHQLRDSGMVATSSTTAKQCYNCGIIGHVQSECRRQ
ARHSGRSKTNQIPARGQQNNFRQSRRNN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf