mRNA_P-littoralis_Contig90.81.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig90.81.1
Unique NamemRNA_P-littoralis_Contig90.81.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig90.81.1 vs. uniprot
Match: D8LHH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHH0_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 1.180e-28
Identity = 72/84 (85.71%), Postives = 76/84 (90.48%), Query Frame = 1 
Query:  238 DVAGTLRPPSRKQTEALRQVLLAGLLDNVARRARAGTVKAGSKLFRGCAYLSGNEAVTEPLYIKSTSVLFSRDPLELPESGWCI 489
            DVAG LRPPS KQ++ALRQVLL+GLLDNVARRA AGTVKAGSKLFR CAYLS NEAVTEPLYIKSTSVLFSRDPLELPE  W +
Sbjct: 1355 DVAGALRPPSSKQSDALRQVLLSGLLDNVARRAPAGTVKAGSKLFRECAYLSCNEAVTEPLYIKSTSVLFSRDPLELPE--WVV 1436
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BLAST of mRNA_P-littoralis_Contig90.81.1 vs. uniprot
Match: A0A7S4NE82_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NE82_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 4.630e-8
Identity = 34/78 (43.59%), Postives = 51/78 (65.38%), Query Frame = 1 
Query:  241 VAGTLRPPSRKQTEALRQVLLAGLLDNVARRARAGTVKAGSKLFRGCAYLSGNEAVTEPLYIKSTSVLFSRDPLELPE 474
            +  ++ PP++ Q + L Q + +GLLDNVARRA    +  GS  F   AY+S ++++ EPLY+ STS LFS++   LPE
Sbjct:   53 ILSSMPPPTKAQEKLLMQAICSGLLDNVARRATPEMLPDGSMRFTRAAYVSCSKSLKEPLYVDSTSALFSKESRRLPE 130
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BLAST of mRNA_P-littoralis_Contig90.81.1 vs. uniprot
Match: F0W953_9STRA (Uncharacterized protein AlNc14C38G3320 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W953_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.010e-7
Identity = 35/74 (47.30%), Postives = 48/74 (64.86%), Query Frame = 1 
Query:  253 LRPPSRKQTEALRQVLLAGLLDNVARRARAGTVKAGSKLFRGCAYLSGNEAVTEPLYIKSTSVLFSRDPLELPE 474
            L PPS    + LRQ++ AG +D VARRA  G V+ GSKL R CAY++    + EP+YI   S +F+ +P +LPE
Sbjct: 1012 LDPPSPPTEDVLRQIIAAGFMDQVARRAPRGMVEEGSKLDRNCAYVNCTGDIKEPIYIHPHSHVFTANPSKLPE 1085
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BLAST of mRNA_P-littoralis_Contig90.81.1 vs. uniprot
Match: A0A662XQP9_9STRA (HA2 domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQP9_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.320e-7
Identity = 30/79 (37.97%), Postives = 52/79 (65.82%), Query Frame = 1 
Query:  238 DVAGTLRPPSRKQTEALRQVLLAGLLDNVARRARAGTVKAGSKLFRGCAYLSGNEAVTEPLYIKSTSVLFSRDPLELPE 474
            +++  + PP ++  + LRQ++ AG LD VA+RA  GT+  G+K+ R CA+++    V EP+YI   S +F+ +P +LP+
Sbjct:  221 ELSPKMPPPDQETQQILRQIVAAGFLDQVAKRAPPGTITEGTKIERNCAFIAATGTVKEPVYIHPHSSVFTPNPTKLPQ 299
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BLAST of mRNA_P-littoralis_Contig90.81.1 vs. uniprot
Match: A0A8K1FS28_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FS28_PYTOL)

HSP 1 Score: 65.5 bits (158), Expect = 5.280e-7
Identity = 33/83 (39.76%), Postives = 51/83 (61.45%), Query Frame = 1 
Query:  223 DSAPSDVAGTLRPPSRKQTEALRQVLLAGLLDNVARRARAGTVKAGSKLFRGCAYLSGNEAVTEPLYIKSTSVLFSRDPLELP 471
            D  P +++  + PP       LRQ++ AG LD V+RRA  GT+  G+K+ R CAY+S + ++ E +YI   S +F+ DP +LP
Sbjct: 1094 DFDPIELSPRMPPPDATTQTILRQIVAAGFLDQVSRRAPPGTITEGTKIERNCAYISASGSIKEAVYIHPHSHVFTPDPAKLP 1176
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BLAST of mRNA_P-littoralis_Contig90.81.1 vs. uniprot
Match: A0A024GV99_9STRA (Uncharacterized protein n=3 Tax=Albugo candida TaxID=65357 RepID=A0A024GV99_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.490e-6
Identity = 34/74 (45.95%), Postives = 47/74 (63.51%), Query Frame = 1 
Query:  253 LRPPSRKQTEALRQVLLAGLLDNVARRARAGTVKAGSKLFRGCAYLSGNEAVTEPLYIKSTSVLFSRDPLELPE 474
            L PPS    + LRQ++ AG +D+VARRA  G V+ GSK  R CAY++    V EP+YI   S +F+ +  +LPE
Sbjct:  868 LDPPSLPTEDVLRQIIAAGFMDHVARRAPRGMVEEGSKFERNCAYVACTGDVKEPIYIHPHSHVFTANASKLPE 941
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig90.81.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LHH0_ECTSI1.180e-2885.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S4NE82_9STRA4.630e-843.59Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
F0W953_9STRA1.010e-747.30Uncharacterized protein AlNc14C38G3320 n=1 Tax=Alb... [more]
A0A662XQP9_9STRA2.320e-737.97HA2 domain-containing protein (Fragment) n=2 Tax=N... [more]
A0A8K1FS28_PYTOL5.280e-739.76Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024GV99_9STRA1.490e-645.95Uncharacterized protein n=3 Tax=Albugo candida Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig90contigP-littoralis_Contig90:358801..368977 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LHH0
Preferred nameDHX37
PFAMsDEAD,HA2,Helicase_C,OB_NTP_bind
Model size2773
Max annot lvl2759|Eukaryota
KEGG koko:K14780
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008026,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022613,GO:0030490,GO:0030554,GO:0030684,GO:0030686,GO:0031974,GO:0031981,GO:0032040,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0042254,GO:0042274,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070035,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901363,GO:1990904
Exons5
Evalue9.26e-35
EggNOG OGsCOG1643@1|root,KOG0926@2759|Eukaryota
EC3.6.4.13
DescriptionATP-dependent RNA helicase
Cds size477
COG categoryL
BRITEko00000,ko01000,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig90.81.1prot_P-littoralis_Contig90.81.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig90 358819..365386 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791805.634561-UTR-P-littoralis_Contig90:358800..3588181680791805.634561-UTR-P-littoralis_Contig90:358800..358818Pylaiella littoralis U1_48UTRP-littoralis_Contig90 358801..358818 +
1680791805.6833546-UTR-P-littoralis_Contig90:365386..3660491680791805.6833546-UTR-P-littoralis_Contig90:365386..366049Pylaiella littoralis U1_48UTRP-littoralis_Contig90 365387..366049 +
1680791805.703488-UTR-P-littoralis_Contig90:366938..3672111680791805.703488-UTR-P-littoralis_Contig90:366938..367211Pylaiella littoralis U1_48UTRP-littoralis_Contig90 366939..367211 +
1680791805.7187817-UTR-P-littoralis_Contig90:367635..3689771680791805.7187817-UTR-P-littoralis_Contig90:367635..368977Pylaiella littoralis U1_48UTRP-littoralis_Contig90 367636..368977 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791805.648237-CDS-P-littoralis_Contig90:358818..3588701680791805.648237-CDS-P-littoralis_Contig90:358818..358870Pylaiella littoralis U1_48CDSP-littoralis_Contig90 358819..358870 +
1680791805.6584294-CDS-P-littoralis_Contig90:364358..3645821680791805.6584294-CDS-P-littoralis_Contig90:364358..364582Pylaiella littoralis U1_48CDSP-littoralis_Contig90 364359..364582 +
1680791805.6705818-CDS-P-littoralis_Contig90:365185..3653861680791805.6705818-CDS-P-littoralis_Contig90:365185..365386Pylaiella littoralis U1_48CDSP-littoralis_Contig90 365186..365386 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig90.81.1

>prot_P-littoralis_Contig90.81.1 ID=prot_P-littoralis_Contig90.81.1|Name=mRNA_P-littoralis_Contig90.81.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=159bp
MPPHHGRPGGDMAEATAGRKLPGRTRTQRRGALRPEAGTCFCSQIFSTRP
PWTAPCSSGDSSRAWSISDSAPSDVAGTLRPPSRKQTEALRQVLLAGLLD
NVARRARAGTVKAGSKLFRGCAYLSGNEAVTEPLYIKSTSVLFSRDPLEL
PESGWCIR*
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mRNA from alignment at P-littoralis_Contig90:358801..368977+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig90.81.1 ID=mRNA_P-littoralis_Contig90.81.1|Name=mRNA_P-littoralis_Contig90.81.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10177bp|location=Sequence derived from alignment at P-littoralis_Contig90:358801..368977+ (Pylaiella littoralis U1_48)
GCACGACCAGCACGCCACATGCCCCCACACCACGGACGACCGGGGGGAGA
CATGGCCGAAGCCACAGCAGGTGAAGAACTATTTTTCAGCTGCACGTGCG
TGTTTGATTGATGAATATCGCAAAGCCAAACCTAAAACGAAAACAGACGA
CTGGCGACTTTTTGGATGTCCATGTAGCCGTGGTGCAACTACTGCCTGTA
GCGCTCTCCAATACTCTTGTGTAGGTGTTGAGGACTCACCCTGCTGTAAG
GCTACGTGTGAGTGTATCAACCCCCACACAGGCAGTCGCCATCATCTGAC
CCAGATCATCGTCCTCGAACCAAAATTGCTGCTGTATAGGTATGATATGT
TCAAGGATGTCCATCGATCAGCTGCCATCATACAGGCTGGTTCACGGAAG
AAACCCCAAATATATGATACATGGCGCAATAAGAACCCGAAATACACAAA
CCTGGTACCATACCGCTGTTAATGGGGGAAGGTCGTGACATTCTCGAATT
TTTGTGTTAAGGCTCTAGTGGTGGCGCTATGGGCGGAAAATGTGTGTGTT
TTTTGTTTTTGCTTTTTTTACGGAATGACGTGATTTAACACCCCCCCAAA
TCAGACTTGCGACACTAATGCCACACACAATGAATTCCAGATATAAACTT
TTTTTCGAACATGTATAGTCTCTCTTGGTTTTAACGAACGTGCCCACAAT
TTTCGTCTTCTTGTCAAAAACACAAAGTGACCTAGGTTTGGCTGATTATG
GCTATAAAGTGCCCAAAAAGACCCGATGCAATTCTAAATTCAAGTAACTC
GTGGCACATTTAGGACTTTTATTTTCTACAATCGCGTTTTCTCACGCGGT
TTTTACTTTTTACGAGTTAGACCCTGAAATTTTGCGTGCATGTTCTATGG
ATCCCTAACAAACTTCGTACAATCGAGTTTTTTATTTTAGTTTTTGTTCA
CCAGATATCCGGGGTCCCGGATGACGAGGTAAGCCCCGAAATACCTTTTT
TACTCGAAGATACTGTATCTATGTAAAGAAAAAAAAAAACTCGATCGTAC
GAATAAGTTGCGTAGGAACCCATAGAACATGCTTGCTTGCAAATTTCAGG
GGCTAACTCGTAAAAACCGCGTCAGAAAATGATGCCGTCTGCATTTGGGG
TTTCTTCCTTGAACCAGCCTGTATTGAGATCATCTTTGAGGACTCTACTC
TGTAGTGCTGTGTTTACTTTGTGCCAGAATTCGTCGAAGCCTGGTCGCCT
GCATGTATGTGACATGAGGTTGTACCACACCCTCTTCTGTCTCTACGCCA
GTACAGCTTTGGTTTTGAAAGCTTGGTTACTCCTGTGAGCAAGACGAGTG
TCAGTGCCGATGATGGTGGCGTTACAGACAGCAGCAGCAGTAGCAAGTGT
CTCGGTCGGGAGCTTTTCGAAGGCACATATCGCCTATTATTACTCCCTCA
CGCCAAAAACTACTCCGGAGTACAAAATTTACTCTGTAGCCCTAAATACA
AACGCTCTCCTCGACAACGGAGTAGAGTTCGGTGTTGGCGCTCCCTATCA
TACGACGTACGTACCAGTACGTATCATAGTTTACTGGATAATTGTGGCGG
TATCATCACATCATACGCTTTTGGGATGTAGGAGGCACGCGCCAAATTTC
AACCAAAAGTGGGACACACGAACGCGGGATTGACCATTAATTGACACATG
TACAATGGATTTGTTGTTGTTACTGTTGTTTTCGTTGTTGTTGTTGTTGT
TGTTGTTGTTGTTGTCGTTGTTGATTTCACATTGAAAACCATTCCGATCT
CTCCTCAGTACCTTCTAATGTCCGTACTCCACCGATCAGGTACGATTTCC
GTAGTCCCAGGCTCCTTGCCCCAGAAGAGGTATATAGTACTCGGGAGATC
CCCTCAGTCCACCAAATAAAGGCACGACAAGGAAACTCCGGCAAAAACAA
AAACAGGCCCCGAGAAATCACACAACGCTGTACACAAATAGAACAAGAAA
CAAGAAAACAAGAAAAGGGAGCCTGGTCCAGAGCCAAGTCACAAAATGAA
ATAAAAAGTCAAAAATAAAATGAAAAGTCACAGAGGAGTGACAAAAAGAC
CAAAATAGACCGAATTCAGTCGCCAAGGTGTCGATAAAAAGGGACATCGG
GCGTGCTACTCCCTTCACCGGCCCAGTAACAGTTTCAGGCAGCGCAAGTA
CGCAGGCGTGAAAAATAAGCGCATTATACTACTTACACTGCGAGCACGTA
TCATACGGTTCAGAGTGAAGTTGGACCGTAACGAGTCGCTATTTCCTGCC
GTGGTGACTACTTACTGCTGCTACAGTATGCAAGACAAGCTGACAGCACA
CATTCATTCGTATATGCATATACCGTTCAATGTATCATATACCCAGCACA
TGTATGTGAATCGTAAGTCACTGAGACGACCCCCCACAAAACTTTTTTGT
TGAGCCTGATAATAACCTCAGGGGAGCTGCAAACGGTACTCTGTGTGTAG
GTTGAGTTGTAGAGATACAGATGTATGCCCCCCCATTGTGTCCGTTGCTA
ATCTACTCTAGATCCTCGTCTGGAGAGAGGTTCGTCTCTTTTTTTTTTCA
AGAAAAAGTTCACTTTCCGGTACAGACTGCTGCAAACAGTAGAGAGATAA
TATGCACTGGCTCAATTTCTTTACTCAAAGCGTTCTTCTGTGTTCGTTAT
TATCGGAAAAAATGTGAGATCTTTGATTGATTTGAATTGTATACCGGTAG
TATGTCGGAGGCATAGACTATATGGTATAGAGGGGAAACCGGGAGCGCGT
AGGCAGGTCGGGTCGCGCCTTTTCTCACTCTTTGAGTAACAAGGATGTGC
GTCAGCCTTGCATATTCATGTATCCCTCGCCTACCAGTGCTATGGTATCC
GATAGCAGTGAATTCATTTGAGGACTTTCTTCACGGTGAACCAGCCTGTG
AGGTGAATCATTTTTTACACGCGTGGCACCTCGGTAAAAATACCGCGGTG
TTATCCCGGCACCTTTCACGACAATTCATACAGAGTTCTTGTTGTTGTTG
TCGTCGTCGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCGTTGTTGATTTC
ACATTGAAAACCATTCCGATCTCTCTTCAGTACCTTCTAATGTCCATACT
CCACCGATCAGGTACGATTTCCCTGGTCACAGGCTGCTTGCCCCAGAAGA
GGTATATAGTACTCGGGAGATCCCCTCAGTCCACCAAATAAAGGCACGAC
AACGAAACTCCGGCAAAAACAAAAAAGGACCCCGAGAAATCACACAACGC
TGTACACAAATAGAACAAGAAACAAGAAACAAGAAAAGGGAGCCTGGTCT
AGAGCCAAGTCACAAAATGAAATAAAAATACGGAGTAGTAAATAAAAAGT
CAAAAATAAAATGAAAAGTCACAGAGGAGTGACGAAAAACAAAAAGACAC
CGAATTCAGTTGCCAAGATGTCGATAAAAAGGGACAACGGGCGTGCTACT
CTCTTCACCGGCCCAGTGACAGTTTCAGGCAGCGCAAGTACGCAGGCGTG
AAGGGGGCAAAGAGGCAGAAGGGCAGAAAAAAACAGAGAACACAAGAAGA
AAACTTCGAAGGACGTGGTAGCTCAGTCAGTACAAAGGTAAAAGTGTTAC
AGTTCCCTCAGTTATAGCTGCTCAGCTCGATTATCTGCGTCCTCCGTCTC
TCTTTGGTATATTTTCTTGGGAAGAAAAACGACACACTTCGTGACTAAAC
TGCTTTATCAATCTACTCTTTATCTCGTCGATCCTCGTCTACAGAGAGGC
TATTATGACTCACTCTACTAGCAGAGTACGGTGAGATTTGTACCAACGGC
TGCACATGTGCAGGGGAGCGTCAATTGAATATTTGAGACAATCATATCTG
CTTGATATAATCAGCGATGACCTGTCGTATCCCCCAAAAGGGAGTCCATG
AGTACGCGGTAACGCGATGTGCGTATAATTGCCGTACAAGAATTGGTGGT
ATATTGTTCGCGGTAAGCCTAACCCGGGGGTATCGAAAAATCGCGGGAGT
TCCAATATTTGCACGGTGGTAATGGCATGGTAAAACACCGCGGTGGTATC
ATAGCAGACTATGCTTTTTGTTGACAGGAGGAATGTTCTTCTGATGCTCT
TACACAGCAGTAAAATACCCGTGCTTAATAATAGTAGTGTGGTACTACCG
TGCACAGGCACCACCACAGACGATACGAATGTATACCGGTCGGTACATGA
GCGACGTACCGGTCGGTATGTGAGCGCGCCATGATTCGGCATGCACTGCG
GTAATTTTTTGTCGACTGCGTCGTTGCCAACAGCCGTATTGCTGCTGCAG
TAGCTGCAACATTCGAGCAATAATCGCGTTTCACACCACATATATATATA
TACTTCGAAGTATATATATATGAATCCCTCCAGTGTGGGCGATGAAACTA
CCGTGAGCAACCACAAAAGGTAGCCCTCCCTATTCGGCAGCCGGCGTGCG
CGCGTGGCTTGCTGCATGGAATTGTAGTCTGTGTCGTCCCAGCGCTGTCT
CATCTGTACCTCCCACGCCCCCCCACCAGCAACAACAACGTCGTCGGCTG
TTCCGAATAGTGAAAAGCGTTAGGCATCGATCTGTTGCCACTCCTGCCCT
TTCTTGCTGTTGTTGCTGTCGTCAAATCAAACCCCATATTTCGCGAATCA
ATGATGTTGCATATTGTCCCCACGTTGTGCCGGGCCTCACGGGAAAAAAC
GCACTCCCTCACCTGCTTAATCTGTCGTATGCATCGGGACCACACACGTT
GCAACCACCGACCGCATGGAGACAGAGAGAGCTCTTCGCGCCCATTGTTG
TTTTAGACGGCTCTGCTACAAATGGGACGCAAAATAATCCAGTGTTGACC
TTCCTTCTGCGTGACCCCACCCCGGCTGGTGCGCACAAAACATTCTGCGA
AACGTTTTCGACTACTGGCGTCCAGAATACTAAGATGTAGATAGGATGAC
AAAACAACACACAGACACTATTTTTATACCGTTTGCAGCGATTACGCAGC
AGCCGCCCCAAAAAGATTGGTGCCAAAACACCGCACACACACCCCAACCG
TCTCCGGGGAGGGCATGCACCCTTATCACAACTAAATGTATGTGTGATTC
TGGTACATTATCAGACGTGCACCATCATTTATCTGCGTGTTATGTTGTAG
CATGATCTACGAAATAACAGTAGTAGCGACCGGCGTTTCGCGGTTGTACA
TCATACTCCTTTTACCTGTACTCACCGTCCCCGCAAAATTAACCTCAGTT
TAACCTTTCAGGTTACATGCGTGCCGTAATATAGTGCTCTGAAGTACCGG
TACAGTACAACGTACGGGCTCTGTTTGTTCCGTCGGAATATCAAACTATA
CCCACTGATTGCTCTTCTCTCGCTGAATGCGTGCCGTCAACCAAACACCA
GGTGCGCATCGAAGTATAAATGTACGGGCTCTGCTAATTCAGTCAGAGTG
TCAGGCATTACCCACTGGCTGCTGCTCTCTTGCTTGCTTTTCGTTCGGCT
GCCGGAAGGTCGAAAGCTGCCGGGGCGTACGCGTACGCAACGTCGGGGGG
CACTGCGGCCGGAGGCGGGGACTTGTTTCTGTAGCCAAATTTTCTCCACG
CGCCCACCATGGACCGCTCCCTGTAGCTCCGGCGACAGCTCTCGAGCCTG
GTCGATCTCCGATTCGGCACCGAGCGACGTTGCCGGAACCCTGCGGCCGC
CGAGCCGAAAACAAACGGAAGCGCTTCGGCAGGCGAGTTAGTCAGAGCAG
AGTTGATGTTGTTGTTGTTGTTGTTGCTGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGGTGGTGGTGGTGGTGGTGGTAGAGGTGGTGGTGGTGGCGGC
GGCGACGGCGGTGGTTGTGGGGTGTTCGTGATGTTGTTGATGTGCAGGGA
ACCCCAGCCTTAGCCCGTTCCAGATAAAATGATCTCACCCATGGCGGCAC
CCCGTCAACACCCCCCTCTACCCCCCACTCCTGACCTAACTTTGTCTCAG
CACCTGTGTACTGATGTACCGGTACTGTGTGTATCATGTTAAAGGCTGCT
CATAAACAATGTGGGAGGGCTGTACTACCGCTCCGCTCCGGCCGGGACAG
CAGTGCAGGCTGCTACTGAAAGCAACACACAGCAGTACTGCCTGAGCGCT
ATCACCTGTCCTACCAACGAGCCCCTTGCCGCAGTATCAACTTCGTTTCC
ATGTACTACTGTACTGTACTGTTATCGCCGCCCGTGCGTTTTTCTATTCT
TCACATCATGTGGTACCCCTTCTCTTGACACTCGCTCCACACATGTACAT
GGACATGATTGTTTCCGTCTCCCTCCCCCCCTCAGGTTTTGTTGGCCGGG
CTGCTGGACAACGTCGCTCGGAGAGCACGGGCGGGAACGGTCAAGGCCGG
GAGCAAGCTCTTTCGGGGGTGCGCCTACCTCAGCGGCAACGAGGCTGTGA
CGGAGCCGCTGTATATCAAGAGCACCTCGGTGCTCTTCTCGAGAGACCCG
CTGGAGCTGCCGGAGAGTGGGTGGTGTATCAGGTGAAAGACAAGAACCGA
CAAAGAGTTTGTAGCTCCGCTCTCCTCAGCGCAACGTCCAGTTGACTGAG
GGACCCACCGCTGCTACACGCTGGTATCATATCATGTTATAGTGTAGGAG
TCTTTGAGAGCGACCGGCGCCACGCATCAGGCGGCCCAGGAACAAGTATA
GAGCCAGCAGTTAGCGTCCCCGTCTCTTGTTACACGCGCAGGCGTTGCAG
TGCAGTACCGGCTCGTCGTTGCGCACACCACGCCCTCGTCCTCAGAAAAT
CGCACCCGCCACGAGCAGCAGCGGCGGGTGCTATCATATCTCGTCCTCTT
CGGTGTGTTTGCCTGTCTGTGTGCGCCTGAGTGCCTGCGTAAGCTTGTGT
GTGTTTATTTCTGCATCCTTCGGACCGTCTAAAGTTCACGTCAACAGCAC
AGAAAAGTTGAGCGTTCGAAATGCTAATATCAACCCCCCCCTTTATCTTC
CTTTTTTTTCTTTTTTTGTCCCGGACATCGTGCGGGGTGAGCGCGAGGGA
GCGGCGGAGAACATGACGTGCGTGACTGCGATCGAGGCCGGCTGGATCCC
CGCTCTGGCGGAGGGGTCGCAGCTCCTGTCTTTCCCCGAGCCGCTGGTGT
CGCCGCCGCCGAGCTACGACAACCAAAATATGCATTCCGTCTTGTGCAGG
TGAGGGCTATCCTGTTCTAACGTTGTGTGGAAATAACTCAGGAGAAGAAC
TCAGCGATGTAAGTCGCTGTTGCTATCGTTGTTGTCGATATGGTACGGGT
AGAGTCGTTTTTTTTTATGACCCCCGTCCGTGGCCACATATTGGTGGTCC
CCACTTTCACTTCAATTAGGATGCCATTCCAACAAGAATACTGTGTGCGG
TTTGTGTGTTTGGTGTTTCTATGTTTGGCCGGCGCGCTTCGGTGAAGGGA
TTGTGTGTCTTTTCTGTCTGTCCGAGTCGTATCTTTCTTCCTCGTGCACG
CATATCAAATCTGCACAAAATATACGTGTGAAGCAATAAAGGCAAACAGT
GCAGTGTCATGCGACCCCTCCATTGTTGGGGCGGGCGAAGTGGTACGGCT
TCGGTACGGTACGGTATTGCACGGTTTCGGCACGGTAAGGTACGGTACGG
TGCGGCACGGCAGCGACGATGCCAGGCAGACTCCGGGCGCCCGAGTCTGC
CTGACATCTCCGGGCCGAGGGTGGTCTGTGAATTGTTTAGGAATGTTGTG
GTGCCATACGTACAAACATGAAACACTTGAGAGTCTTATCAACGGGAGCA
AAAACCATGCTATTGCTCTTCTTATCAACGCGAGCAGAAACCATGTTAAT
GCTGTCCATGTGACATGATATTCAACTTTCAGCAAACACCAACAAGGCAG
AAACAGACAGCGGTGGGTGGTGTTTGTTTAGAGCAAAAGGGAAAGGGAGG
CGACGAAAGAGGCGCGTGGTGGCGCCCGCTCGCTTCCTCTTGTCTGCAGG
CAATGAGAAATGGTTCGCAACCAAGCGCACAATGTTGGCAGAGACCTAAT
CCTCATGTGCCGCCCCCCCGACTTCCCGCCGGCACCAGGACGCAGGGTTA
CTCCGCGGTACGGCGTCCACGCGTCGGAGCTTCCCCCGCACCTGACGGAG
CTAGTCTCGGCGGGGCCGAAAAACGGACCGGGCACGGTTTTCAGGTGGTT
CGAAAGGCTCTCGCTGGAGGGAAAGGTCGCCGGGTGCTTGTCCGAGCTGA
AGGGAAAGGACATGCTGAATGATCCGCCTTCTCTGGTGACCAGGGAGATG
CCAACCAAAACGGTTTGTGCCAAACACCGGCGGCGGCCGTTGTTGATTTT
TGAGAAGCAAGGTATTTCGTGGAGAACCATAAGTTTCGTTTTGTTTCTTG
TGAGTTTATTTTTAATGTTGGAACTGAATAGACGCATAGAGATTACAGCA
CAGGGGGGGGGGGGTTGTCTGTTTCAGCATGCTGCTGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCACTCCTGTACTTGTGTGCGCGGTATCCCTTTTGCC
GTTTTGCCCAAACGATCACACGGTGCTCGCTAGTTGCCCCCTCTTCCTGC
TCCGTCTGTAAAGGATGCAAATGCATCATAGTGCTCATGTTTCACGCAAA
TTATAACGGGGGGTCCAGGCAAACTCGCACATACACCGGAAAACATTGGC
GCAGCTCAACAAGCCCATAACAACCATTTTTCATTCTCCCCCTGCCTGCT
ATATGCTTGCCGCATGGACGGGACACAACACACAGGTGGCTATCCTCGTG
CTGGAGCTTCGGCAGAAGGGCGTCTGCTCCTTGCCCGCCCTGGTGATGCA
GTGGCGAAGAGACCCGGCTTACCTCAAGAGCGCGACCGACGTGTGGATCA
AGCTAGGCTCGAAGGAAGGGTTCCTCAAGGCGTGGCCGAACGCGATCAGA
ACGGCGGTGTTGGCATTGGGTGCCGCGGCCGCGAGCGGGAGCAGGTCAGG
AAGAGAGAAGACCGGTGTCCCCACCCGTGTTGGTGCTGGTGCTGGTGCTG
GTTCTTGTTCTTGATCTAGTGGCGAGGCTGACGTCAGTGCCGCTGCCGGT
GCTCGGGAGGGGGAGAAAGAGGGGAAAGGAGAGAAGGCGCCGAGTAAAAG
ACAAATGACGCCGCGCCGTCGCGAAACGTCAAAAATACAAACACGTGCCG
CGACGAAGGAAATGGAGGCGTCGCCATAGCGGTGGAAAAAGGACCGATTC
GTCGATGACGTCAGTACAAAACCTGCGTCTAAATAGATATGGTAGCCTGT
CTGTATGGTTGTCTGTGCGTGTGTGGAGGGGCATGCAGGCAGCGGGCGAG
CGGGCGAGCGTTGGCTGTGCTGTGTTTGACTGTAGCCTGCCACGGGTCGA
TTACCGGTGCTGGACTGGCGTGCTCGTTTGATAATCTGGTGTGATACCAA
AGGGTCGATGTGTAGTCTTCATATTATGTGATAACTGCTGTGTCATTTTC
GGTTCGACGGATATGTCGTGTGGTATGATGCCCTTGTTTGGTCGGTTTTG
GGAGGGGTGGTTCGCGGCGTGTCACCATGTACTTCGATTGTCGTTGCTGT
TTTGGTATATCTTTTAGCGAACAAATGACGACCTGTATCGTAGATAGGCA
CCCTGCTGCGATGCCAACTCCTCGCGGGACCGATAAATGTCGAATGGCAA
TCTCATGTCGGTGTCCAATGATTCTTCTTTCGCTCGGCGGGCACTCTGTA
GCTCGTTGGCAAAGGGAGAAATACAGCAGTGTGTGCCCGTCCTTTTCCCG
CTTACTCCATGACGCTGCACCCCCCCTTTTCCGCTTCGGCAGTAGATCTG
CCCTATTTCCACACCCTCTCGTGTAGGCGTGCCCCCCAGGGGGCTTCCTC
TCGAAAAAGCCCGAAAATAGGGGCGTTTGCAGCATACCCGCGGGGCGTCG
CTCTAAAAGAGTATTGAATCGAGCGAGGCGTCGTTCGCTCGGGTTTTCGC
ATTTGTGTTGCCGCAATTTTCTCGCGCCCCCTTCTGGGGCGTTTCCGTTG
TTTGCCATTGACGCCGTGTTTGTTACTCCGTTCCTCGTGGTGAGACATAG
GAGGTGGTGTGTGTTTGTGAACCCTTT
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Coding sequence (CDS) from alignment at P-littoralis_Contig90:358801..368977+

>mRNA_P-littoralis_Contig90.81.1 ID=mRNA_P-littoralis_Contig90.81.1|Name=mRNA_P-littoralis_Contig90.81.1|organism=Pylaiella littoralis U1_48|type=CDS|length=477bp|location=Sequence derived from alignment at P-littoralis_Contig90:358801..368977+ (Pylaiella littoralis U1_48)
ATGCCCCCACACCACGGACGACCGGGGGGAGACATGGCCGAAGCCACAGC
AGGTCGAAAGCTGCCGGGGCGTACGCGTACGCAACGTCGGGGGGCACTGC
GGCCGGAGGCGGGGACTTGTTTCTGTAGCCAAATTTTCTCCACGCGCCCA
CCATGGACCGCTCCCTGTAGCTCCGGCGACAGCTCTCGAGCCTGGTCGAT
CTCCGATTCGGCACCGAGCGACGTTGCCGGAACCCTGCGGCCGCCGAGCC
GAAAACAAACGGAAGCGCTTCGGCAGGTTTTGTTGGCCGGGCTGCTGGAC
AACGTCGCTCGGAGAGCACGGGCGGGAACGGTCAAGGCCGGGAGCAAGCT
CTTTCGGGGGTGCGCCTACCTCAGCGGCAACGAGGCTGTGACGGAGCCGC
TGTATATCAAGAGCACCTCGGTGCTCTTCTCGAGAGACCCGCTGGAGCTG
CCGGAGAGTGGGTGGTGTATCAGGTGA
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