mRNA_P-littoralis_Contig1209.17.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1209.17.1
Unique NamemRNA_P-littoralis_Contig1209.17.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1209.17.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE)

HSP 1 Score: 442 bits (1138), Expect = 7.530e-152
Identity = 198/253 (78.26%), Postives = 222/253 (87.75%), Query Frame = 1
Query:    1 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAIGSAGCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGVLFNSREKIDNAWFTACIIHNMLLQFDGL 759
            +VLGVLQVLGRGNCFADVANFSLMS++TAE+SFHRFC CFA GLW  W+RLPEG+ L++VES Y  LG+PGA+GS  CTHV WERCA+SET  HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAENDKTVV+RDLSV R++ EEPW SYKYE+Y   G  + HTGGWLI DGGYHRVPLLICP+K YA+V +Q+WSKR ESVRKDIEC FGRLKGRFRLFKTG+LF  R KID+AWFTACIIHNMLL FDGL
Sbjct:  210 KVLGVLQVLGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEGLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGL 462          
BLAST of mRNA_P-littoralis_Contig1209.17.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE)

HSP 1 Score: 431 bits (1108), Expect = 6.560e-149
Identity = 192/253 (75.89%), Postives = 220/253 (86.96%), Query Frame = 1
Query:    1 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAIGSAGCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGVLFNSREKIDNAWFTACIIHNMLLQFDGL 759
            +VLGVLQVLGRGNCFADVA  SLMS+ TAEKSFHRFCDCF+ GLWHQWV LPEG+ LK+V   Y  +G PGA+ S  CTH++W  C +SETN HKGKEGYT++V+EA CDH+GRI++STKG+PGAENDKTVVKRDLSV R++ EEPWASYK+ L+ L+G ++ HTGGWLIVDGGYHRVP LICP+K YAS  QQEWSKRFES+RKDIEC FGRLKGRFRLFKTG+LF +REKIDNAWFTACIIHNML QFDGL
Sbjct:  112 KVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRLFKTGILFGTREKIDNAWFTACIIHNMLHQFDGL 364          
BLAST of mRNA_P-littoralis_Contig1209.17.1 vs. uniprot
Match: A0A6H5KRU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU1_9PHAE)

HSP 1 Score: 400 bits (1028), Expect = 8.600e-139
Identity = 176/230 (76.52%), Postives = 200/230 (86.96%), Query Frame = 1
Query:   70 MSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAIGSAGCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGVLFNSREKIDNAWFTACIIHNMLLQFDGL 759
            MS++TAE+SFHRFC CFA GLW  W+RLPEG+DL++VES Y  LG+PGA+GS  CTHV WERCA+SET  HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAENDKTVV+RDLSV R++ EEPW SYKYE+Y   G  + HTGGWLI +GGYHRVPLLICP+K YA+V +Q+WSKR ESVRKDIEC FGRLKGRFRLFKTG+LF  R KID+AWFTACIIHNMLL FDGL
Sbjct:    1 MSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIAEGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGL 230          
BLAST of mRNA_P-littoralis_Contig1209.17.1 vs. uniprot
Match: A0A6H5JY35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY35_9PHAE)

HSP 1 Score: 389 bits (1000), Expect = 3.190e-135
Identity = 180/247 (72.87%), Postives = 201/247 (81.38%), Query Frame = 1
Query:    1 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAIGSAGCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGVLFNSREKIDNAWFTACIIHNML 741
            QVLGVLQ LGRGNCFADVANFSLMS++TAE+SFHRFC CFA GLW  W+RLPEG+DL++VES Y  LG+PGA+GS  CTHV WERCA+SET  HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAENDKTVV                 YKYE+Y   G  + HTGGWLI DGGYHRVPLLICP+K YA+V +Q+WSKR ESVRKD+EC FGRLKGRFRLFKTG+LF  R KID+A FTACIIH ML
Sbjct:    5 QVLGVLQALGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVV----------------IYKYEMYDETGDVTKHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDMECLFGRLKGRFRLFKTGILFGDRTKIDDARFTACIIHTML 235          
BLAST of mRNA_P-littoralis_Contig1209.17.1 vs. uniprot
Match: A0A6H5K604_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K604_9PHAE)

HSP 1 Score: 314 bits (804), Expect = 2.820e-105
Identity = 135/230 (58.70%), Postives = 177/230 (76.96%), Query Frame = 1
Query:   70 MSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAIGSAGCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGVLFNSREKIDNAWFTACIIHNMLLQFDGL 759
            MS +TAEKSFH FC+ F+  LW  WV+LP GD+LK+VE ++ + G+PGAI S  CTH  W     SE  ++ GKEGY +VV EA CDH GRIIA+TK YPG+ENDKT+++RD S+ RI+ EEPW+S KY+LY  DG+ + + G WL+VDGGY ++PLLI P K +A+VE+ +WS+R ES+RKDIEC +GR+KGRFRLFK G+L+ +R+ IDN WFTACI+HNML  +D L
Sbjct:    1 MSVATAEKSFHHFCEKFSAALWDTWVKLPVGDELKEVERVFRKSGYPGAISSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGRIIAATKSYPGSENDKTIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKGAWLVVDGGYQKIPLLIPPIKHHATVEEHDWSRRLESMRKDIECCYGRVKGRFRLFKAGILYKTRDSIDNPWFTACILHNMLHHYDKL 230          
BLAST of mRNA_P-littoralis_Contig1209.17.1 vs. uniprot
Match: A0A6H5K8G0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8G0_9PHAE)

HSP 1 Score: 283 bits (725), Expect = 1.300e-92
Identity = 125/185 (67.57%), Postives = 149/185 (80.54%), Query Frame = 1
Query:    1 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAIGSAGCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPY 555
             VLGVLQVLGRGNCFADVA  SLMS+ TAEKSFHRFCDCF+ GLWHQWV LPEG+ LK+V   Y  +  PG + S  CTH++   C +SETN HKGKEGYT++V+EA CDH+GRI++STKG+PGAENDKTVVKRDLSV R++ EEPWA YK+ L+ L+G ++ HTGGWLIVDGGYHRV  +   Y
Sbjct:  100 SVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMVCPGVVASVDCTHISLPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWARYKFVLFDLEGNTTEHTGGWLIVDGGYHRVSSVWVSY 284          
BLAST of mRNA_P-littoralis_Contig1209.17.1 vs. uniprot
Match: A0A6H5K7N8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7N8_9PHAE)

HSP 1 Score: 275 bits (703), Expect = 3.540e-87
Identity = 126/217 (58.06%), Postives = 158/217 (72.81%), Query Frame = 1
Query:  109 CDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAIGSAGCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGVLFNSREKIDNAWFTACIIHNMLLQFDGL 759
            C+ F+ GLW  WV+LP GD+LK+VE IY + G+PGA GS  CTH  W  C +SE N H GKEGYTS+V E  CDH+GRIIA+TK  PGAENDKTV+ RD S+ RI+ EEPW SY             +T  W+IVDGGY ++PLLI P KT+ +VE+ +WS+R ES+RKDIEC FGR+KGR+RLF   +LF++R+K DNA FTACI+HNML  F+ L
Sbjct:   90 CEKFSEGLWDTWVKLPRGDELKKVEEIYRKCGYPGATGSTDCTHFRWPGCPFSEKNTHTGKEGYTSLVVECACDHSGRIIAATKTCPGAENDKTVIARDKSIWRIRDEEPWKSY-------------YTRAWIIVDGGYPKIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDILFSTRQKGDNACFTACILHNMLHSFNRL 293          
BLAST of mRNA_P-littoralis_Contig1209.17.1 vs. uniprot
Match: A0A6H5KVL5_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVL5_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 2.550e-81
Identity = 132/279 (47.31%), Postives = 167/279 (59.86%), Query Frame = 1
Query:    7 LGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAIGSAGCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHR----------------------------VPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGVLFNSREKIDNAWFTACIIHNMLLQFDGL 759
            +G L+VL  G CF DVA+FSLMS++TAE SFH FC+ F+ GLW  WV+LP GD+ K+                                N H GKEGYTS+V E  CDH+GRIIA+TK YPGAENDKTV+ RD S+ RI+ EEPW SY             +T  W+IVDGGY +                            +PLLI P KT+ +VE+ +WS+R ES+RKDIEC FGR+KGR+RLF   +LF++R+K+DNAWFTACI+HNML  F+ L
Sbjct:    1 MGTLKVLASGCCFQDVASFSLMSRTTAETSFHHFCEKFSEGLWDTWVKLPGGDEFKK--------------------------------NTHTGKEGYTSLVVECTCDHSGRIIAATKTYPGAENDKTVIARDKSIWRIRDEEPWKSY-------------YTRAWIIVDGGYPKSLETDHVVSTQVRIKPTPDSHFRSAVSHIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDMLFSTRQKVDNAWFTACILHNMLHSFNRL 234          
BLAST of mRNA_P-littoralis_Contig1209.17.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 255 bits (652), Expect = 3.910e-80
Identity = 118/252 (46.83%), Postives = 164/252 (65.08%), Query Frame = 1
Query:    1 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAIGSAGCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGVLFNSREKIDNAWFTACIIHNMLLQFDG 756
            QVL  LQ+L RGN FAD+ + S +S  T   +FHRFC  FA  L+ ++V LP G+DL++V   Y+++GFPGA+GS   TH+ W  C Y++  I+ GKEG  +V F+   DH+GR++A T+G+ GA NDKT+++ D +V RI+ +  +   KY+LY  DG      G +L+VD GYH+   LI P K         +SKR ES RKD+EC+FG LKGRFR+ K  + F+ +E IDN +FT CI+HNML  FD 
Sbjct:   83 QVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDN 334          
BLAST of mRNA_P-littoralis_Contig1209.17.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 1.860e-78
Identity = 117/252 (46.43%), Postives = 164/252 (65.08%), Query Frame = 1
Query:    1 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAIGSAGCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGVLFNSREKIDNAWFTACIIHNMLLQFDG 756
            +VL  LQ+L RGN FAD+ + S +S  T   +FHRFC  FA  L+ ++V LP G+DL++V   Y+++GFPGA+GS   TH+ W  C Y++  I+ GKEG  +V F+   DH+GR++A T+G+ GA NDKT+++ D +V RI+ +  +   KY+LY  DG      G +L+VD GYH+   LI P K         +SKR ES RKD+EC+FG LKGRFR+ K  + F+ +E IDN +FT CI+HNML  FD 
Sbjct:  174 KVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDN 425          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1209.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0H2_9PHAE7.530e-15278.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV45_9PHAE6.560e-14975.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRU1_9PHAE8.600e-13976.52Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JY35_9PHAE3.190e-13572.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K604_9PHAE2.820e-10558.70Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8G0_9PHAE1.300e-9267.57DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K7N8_9PHAE3.540e-8758.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVL5_9PHAE2.550e-8147.31DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KY50_9PHAE3.910e-8046.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE1.860e-7846.43Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1209contigP-littoralis_Contig1209:17029..18377 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size759
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue3.05e-60
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size759
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789518.3937628-CDS-P-littoralis_Contig1209:17028..172561680789518.3937628-CDS-P-littoralis_Contig1209:17028..17256Pylaiella littoralis U1_48CDSP-littoralis_Contig1209 17029..17256 -
1680789518.405672-CDS-P-littoralis_Contig1209:17846..183771680789518.405672-CDS-P-littoralis_Contig1209:17846..18377Pylaiella littoralis U1_48CDSP-littoralis_Contig1209 17847..18377 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1209.17.1prot_P-littoralis_Contig1209.17.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1209 17029..18377 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1209.17.1

>prot_P-littoralis_Contig1209.17.1 ID=prot_P-littoralis_Contig1209.17.1|Name=mRNA_P-littoralis_Contig1209.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=253bp
QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVR
LPEGDDLKQVESIYNQLGFPGAIGSAGCTHVAWERCAYSETNIHKGKEGY
TSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASY
KYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRF
ESVRKDIECFFGRLKGRFRLFKTGVLFNSREKIDNAWFTACIIHNMLLQF
DGL
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mRNA from alignment at P-littoralis_Contig1209:17029..18377-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1209.17.1 ID=mRNA_P-littoralis_Contig1209.17.1|Name=mRNA_P-littoralis_Contig1209.17.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1349bp|location=Sequence derived from alignment at P-littoralis_Contig1209:17029..18377- (Pylaiella littoralis U1_48)
CAGGTGCTGGGGGTGCTGCAGGTATTGGGTAGAGGCAACTGCTTCGCGGA TGTTGCGAACTTTTCGCTGATGAGCCAATCTACGGCGGAGAAGTCCTTTC ACCGTTTCTGCGACTGCTTCGCGGGAGGCTTGTGGCATCAGTGGGTTCGG CTGCCTGAGGGCGATGACCTCAAGCAAGTGGAGAGCATCTACAACCAGCT GGGTTTTCCGGGGGCCATAGGGTCAGCCGGCTGCACCCACGTGGCGTGGG AGCGTTGTGCTTATTCGGAAACGAATATCCACAAGGGGAAGGAGGGGTAC ACGTCGGTTGTGTTCGAGGCCATTTGTGACCACGCTGGCCGCATCATCGC GTCGACGAAGGGGTACCCCGGGGCGGAGAACGACAAAACGGTGGTCAAGC GCGACTTGTCCGTCAACCGGATCCAACACGAGGAGCCGTGGGCGAGCTAC AAGTACGAGCTGTACGGTCTTGATGGCACGAGTTCGTGGCACACGGGGGG GTGGCTGATCGTCGACGGGGGGTACCACCGGGTGAGTAAATTGTATGACG TGAGGGCAATGGTGTCGATGAAACCATGAGCGATTGTGAGGTGTGCAGGT ATAAATAAGCACAAGTGTGGTGCCGAAGTGTTGCTGTTGTCTTTCCATGG ATACCCCTCGTGCATGCCTTGAGGGCAATGGTTTCCATTGGGTTGTTGCA GAGAGTTGCAGGTAAGAATAGAGAGTACCCCCCCGCAAAGCATTGAGTCG TACCGAAGTGCAGCTGTTGTCTTTCCAAGAACCCCCTGCCTCCCCGTCGA GGGGGAACCAGCCCGCTGTATTTTTTCTCTAGTGTACCTTTTACGCAGAC CAGAGAACCACTTGCTCCTGTTCACTTTTGCATCTGATGTCGGATGTACA TCGATATGAGGTATCCGGTTGCTCTCGTAATATCTCCGAGGATTGGTGGC TGCGGCCTACATTTTCTCTCCGGTTTGCAGTCAATCGAGAGTCCCACGTT TTTTTTTATGCATTACTTCTTTCGAGGTTTTAAAACTGAATTTCCGGATC GACGAAACATAGGCCCATACCACATTCATTTTTCCCTTCTTTCGCCCCCG CTCTTTTTGGCCGTACACCAGGTGCCCCTTCTCATATGCCCGTATAAAAC GTACGCGAGCGTTGAACAGCAGGAGTGGAGCAAGAGATTCGAGTCAGTAC GCAAGGACATCGAGTGCTTTTTCGGAAGACTCAAGGGGCGGTTCAGGTTG TTCAAGACCGGCGTTTTGTTCAACAGCCGGGAGAAGATCGACAACGCCTG GTTCACGGCTTGCATCATTCACAACATGCTCCTGCAGTTTGACGGCCTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1209:17029..18377-

>mRNA_P-littoralis_Contig1209.17.1 ID=mRNA_P-littoralis_Contig1209.17.1|Name=mRNA_P-littoralis_Contig1209.17.1|organism=Pylaiella littoralis U1_48|type=CDS|length=759bp|location=Sequence derived from alignment at P-littoralis_Contig1209:17029..18377- (Pylaiella littoralis U1_48)
CAGGTGCTGGGGGTGCTGCAGGTATTGGGTAGAGGCAACTGCTTCGCGGA
TGTTGCGAACTTTTCGCTGATGAGCCAATCTACGGCGGAGAAGTCCTTTC
ACCGTTTCTGCGACTGCTTCGCGGGAGGCTTGTGGCATCAGTGGGTTCGG
CTGCCTGAGGGCGATGACCTCAAGCAAGTGGAGAGCATCTACAACCAGCT
GGGTTTTCCGGGGGCCATAGGGTCAGCCGGCTGCACCCACGTGGCGTGGG
AGCGTTGTGCTTATTCGGAAACGAATATCCACAAGGGGAAGGAGGGGTAC
ACGTCGGTTGTGTTCGAGGCCATTTGTGACCACGCTGGCCGCATCATCGC
GTCGACGAAGGGGTACCCCGGGGCGGAGAACGACAAAACGGTGGTCAAGC
GCGACTTGTCCGTCAACCGGATCCAACACGAGGAGCCGTGGGCGAGCTAC
AAGTACGAGCTGTACGGTCTTGATGGCACGAGTTCGTGGCACACGGGGGG
GTGGCTGATCGTCGACGGGGGGTACCACCGGGTGCCCCTTCTCATATGCC
CGTATAAAACGTACGCGAGCGTTGAACAGCAGGAGTGGAGCAAGAGATTC
GAGTCAGTACGCAAGGACATCGAGTGCTTTTTCGGAAGACTCAAGGGGCG
GTTCAGGTTGTTCAAGACCGGCGTTTTGTTCAACAGCCGGGAGAAGATCG
ACAACGCCTGGTTCACGGCTTGCATCATTCACAACATGCTCCTGCAGTTT
GACGGCCTG
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