mRNA_P-littoralis_Contig1209.17.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1209.17.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE) HSP 1 Score: 442 bits (1138), Expect = 7.530e-152 Identity = 198/253 (78.26%), Postives = 222/253 (87.75%), Query Frame = 1
Query: 1 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAIGSAGCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGVLFNSREKIDNAWFTACIIHNMLLQFDGL 759
+VLGVLQVLGRGNCFADVANFSLMS++TAE+SFHRFC CFA GLW W+RLPEG+ L++VES Y LG+PGA+GS CTHV WERCA+SET HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAENDKTVV+RDLSV R++ EEPW SYKYE+Y G + HTGGWLI DGGYHRVPLLICP+K YA+V +Q+WSKR ESVRKDIEC FGRLKGRFRLFKTG+LF R KID+AWFTACIIHNMLL FDGL
Sbjct: 210 KVLGVLQVLGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEGLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGL 462
BLAST of mRNA_P-littoralis_Contig1209.17.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 431 bits (1108), Expect = 6.560e-149 Identity = 192/253 (75.89%), Postives = 220/253 (86.96%), Query Frame = 1
Query: 1 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAIGSAGCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGVLFNSREKIDNAWFTACIIHNMLLQFDGL 759
+VLGVLQVLGRGNCFADVA SLMS+ TAEKSFHRFCDCF+ GLWHQWV LPEG+ LK+V Y +G PGA+ S CTH++W C +SETN HKGKEGYT++V+EA CDH+GRI++STKG+PGAENDKTVVKRDLSV R++ EEPWASYK+ L+ L+G ++ HTGGWLIVDGGYHRVP LICP+K YAS QQEWSKRFES+RKDIEC FGRLKGRFRLFKTG+LF +REKIDNAWFTACIIHNML QFDGL
Sbjct: 112 KVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRLFKTGILFGTREKIDNAWFTACIIHNMLHQFDGL 364
BLAST of mRNA_P-littoralis_Contig1209.17.1 vs. uniprot
Match: A0A6H5KRU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU1_9PHAE) HSP 1 Score: 400 bits (1028), Expect = 8.600e-139 Identity = 176/230 (76.52%), Postives = 200/230 (86.96%), Query Frame = 1
Query: 70 MSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAIGSAGCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGVLFNSREKIDNAWFTACIIHNMLLQFDGL 759
MS++TAE+SFHRFC CFA GLW W+RLPEG+DL++VES Y LG+PGA+GS CTHV WERCA+SET HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAENDKTVV+RDLSV R++ EEPW SYKYE+Y G + HTGGWLI +GGYHRVPLLICP+K YA+V +Q+WSKR ESVRKDIEC FGRLKGRFRLFKTG+LF R KID+AWFTACIIHNMLL FDGL
Sbjct: 1 MSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIAEGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGL 230
BLAST of mRNA_P-littoralis_Contig1209.17.1 vs. uniprot
Match: A0A6H5JY35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY35_9PHAE) HSP 1 Score: 389 bits (1000), Expect = 3.190e-135 Identity = 180/247 (72.87%), Postives = 201/247 (81.38%), Query Frame = 1
Query: 1 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAIGSAGCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGVLFNSREKIDNAWFTACIIHNML 741
QVLGVLQ LGRGNCFADVANFSLMS++TAE+SFHRFC CFA GLW W+RLPEG+DL++VES Y LG+PGA+GS CTHV WERCA+SET HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAENDKTVV YKYE+Y G + HTGGWLI DGGYHRVPLLICP+K YA+V +Q+WSKR ESVRKD+EC FGRLKGRFRLFKTG+LF R KID+A FTACIIH ML
Sbjct: 5 QVLGVLQALGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVV----------------IYKYEMYDETGDVTKHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDMECLFGRLKGRFRLFKTGILFGDRTKIDDARFTACIIHTML 235
BLAST of mRNA_P-littoralis_Contig1209.17.1 vs. uniprot
Match: A0A6H5K604_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K604_9PHAE) HSP 1 Score: 314 bits (804), Expect = 2.820e-105 Identity = 135/230 (58.70%), Postives = 177/230 (76.96%), Query Frame = 1
Query: 70 MSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAIGSAGCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGVLFNSREKIDNAWFTACIIHNMLLQFDGL 759
MS +TAEKSFH FC+ F+ LW WV+LP GD+LK+VE ++ + G+PGAI S CTH W SE ++ GKEGY +VV EA CDH GRIIA+TK YPG+ENDKT+++RD S+ RI+ EEPW+S KY+LY DG+ + + G WL+VDGGY ++PLLI P K +A+VE+ +WS+R ES+RKDIEC +GR+KGRFRLFK G+L+ +R+ IDN WFTACI+HNML +D L
Sbjct: 1 MSVATAEKSFHHFCEKFSAALWDTWVKLPVGDELKEVERVFRKSGYPGAISSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGRIIAATKSYPGSENDKTIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKGAWLVVDGGYQKIPLLIPPIKHHATVEEHDWSRRLESMRKDIECCYGRVKGRFRLFKAGILYKTRDSIDNPWFTACILHNMLHHYDKL 230
BLAST of mRNA_P-littoralis_Contig1209.17.1 vs. uniprot
Match: A0A6H5K8G0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8G0_9PHAE) HSP 1 Score: 283 bits (725), Expect = 1.300e-92 Identity = 125/185 (67.57%), Postives = 149/185 (80.54%), Query Frame = 1
Query: 1 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAIGSAGCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPY 555
VLGVLQVLGRGNCFADVA SLMS+ TAEKSFHRFCDCF+ GLWHQWV LPEG+ LK+V Y + PG + S CTH++ C +SETN HKGKEGYT++V+EA CDH+GRI++STKG+PGAENDKTVVKRDLSV R++ EEPWA YK+ L+ L+G ++ HTGGWLIVDGGYHRV + Y
Sbjct: 100 SVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMVCPGVVASVDCTHISLPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWARYKFVLFDLEGNTTEHTGGWLIVDGGYHRVSSVWVSY 284
BLAST of mRNA_P-littoralis_Contig1209.17.1 vs. uniprot
Match: A0A6H5K7N8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7N8_9PHAE) HSP 1 Score: 275 bits (703), Expect = 3.540e-87 Identity = 126/217 (58.06%), Postives = 158/217 (72.81%), Query Frame = 1
Query: 109 CDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAIGSAGCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGVLFNSREKIDNAWFTACIIHNMLLQFDGL 759
C+ F+ GLW WV+LP GD+LK+VE IY + G+PGA GS CTH W C +SE N H GKEGYTS+V E CDH+GRIIA+TK PGAENDKTV+ RD S+ RI+ EEPW SY +T W+IVDGGY ++PLLI P KT+ +VE+ +WS+R ES+RKDIEC FGR+KGR+RLF +LF++R+K DNA FTACI+HNML F+ L
Sbjct: 90 CEKFSEGLWDTWVKLPRGDELKKVEEIYRKCGYPGATGSTDCTHFRWPGCPFSEKNTHTGKEGYTSLVVECACDHSGRIIAATKTCPGAENDKTVIARDKSIWRIRDEEPWKSY-------------YTRAWIIVDGGYPKIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDILFSTRQKGDNACFTACILHNMLHSFNRL 293
BLAST of mRNA_P-littoralis_Contig1209.17.1 vs. uniprot
Match: A0A6H5KVL5_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVL5_9PHAE) HSP 1 Score: 254 bits (650), Expect = 2.550e-81 Identity = 132/279 (47.31%), Postives = 167/279 (59.86%), Query Frame = 1
Query: 7 LGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAIGSAGCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHR----------------------------VPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGVLFNSREKIDNAWFTACIIHNMLLQFDGL 759
+G L+VL G CF DVA+FSLMS++TAE SFH FC+ F+ GLW WV+LP GD+ K+ N H GKEGYTS+V E CDH+GRIIA+TK YPGAENDKTV+ RD S+ RI+ EEPW SY +T W+IVDGGY + +PLLI P KT+ +VE+ +WS+R ES+RKDIEC FGR+KGR+RLF +LF++R+K+DNAWFTACI+HNML F+ L
Sbjct: 1 MGTLKVLASGCCFQDVASFSLMSRTTAETSFHHFCEKFSEGLWDTWVKLPGGDEFKK--------------------------------NTHTGKEGYTSLVVECTCDHSGRIIAATKTYPGAENDKTVIARDKSIWRIRDEEPWKSY-------------YTRAWIIVDGGYPKSLETDHVVSTQVRIKPTPDSHFRSAVSHIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDMLFSTRQKVDNAWFTACILHNMLHSFNRL 234
BLAST of mRNA_P-littoralis_Contig1209.17.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 255 bits (652), Expect = 3.910e-80 Identity = 118/252 (46.83%), Postives = 164/252 (65.08%), Query Frame = 1
Query: 1 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAIGSAGCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGVLFNSREKIDNAWFTACIIHNMLLQFDG 756
QVL LQ+L RGN FAD+ + S +S T +FHRFC FA L+ ++V LP G+DL++V Y+++GFPGA+GS TH+ W C Y++ I+ GKEG +V F+ DH+GR++A T+G+ GA NDKT+++ D +V RI+ + + KY+LY DG G +L+VD GYH+ LI P K +SKR ES RKD+EC+FG LKGRFR+ K + F+ +E IDN +FT CI+HNML FD
Sbjct: 83 QVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDN 334
BLAST of mRNA_P-littoralis_Contig1209.17.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 254 bits (648), Expect = 1.860e-78 Identity = 117/252 (46.43%), Postives = 164/252 (65.08%), Query Frame = 1
Query: 1 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAIGSAGCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGVLFNSREKIDNAWFTACIIHNMLLQFDG 756
+VL LQ+L RGN FAD+ + S +S T +FHRFC FA L+ ++V LP G+DL++V Y+++GFPGA+GS TH+ W C Y++ I+ GKEG +V F+ DH+GR++A T+G+ GA NDKT+++ D +V RI+ + + KY+LY DG G +L+VD GYH+ LI P K +SKR ES RKD+EC+FG LKGRFR+ K + F+ +E IDN +FT CI+HNML FD
Sbjct: 174 KVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDN 425 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1209.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1209.17.1 >prot_P-littoralis_Contig1209.17.1 ID=prot_P-littoralis_Contig1209.17.1|Name=mRNA_P-littoralis_Contig1209.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=253bp QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRback to top mRNA from alignment at P-littoralis_Contig1209:17029..18377- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1209.17.1 ID=mRNA_P-littoralis_Contig1209.17.1|Name=mRNA_P-littoralis_Contig1209.17.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1349bp|location=Sequence derived from alignment at P-littoralis_Contig1209:17029..18377- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1209:17029..18377- >mRNA_P-littoralis_Contig1209.17.1 ID=mRNA_P-littoralis_Contig1209.17.1|Name=mRNA_P-littoralis_Contig1209.17.1|organism=Pylaiella littoralis U1_48|type=CDS|length=759bp|location=Sequence derived from alignment at P-littoralis_Contig1209:17029..18377- (Pylaiella littoralis U1_48)back to top |