mRNA_P-littoralis_Contig894.3.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig894.3.1
Unique NamemRNA_P-littoralis_Contig894.3.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig894.3.1 vs. uniprot
Match: D7G106_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G106_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 5.410e-36
Identity = 159/498 (31.93%), Postives = 226/498 (45.38%), Query Frame = 2
Query:   80 RFSSRPPAPSAKALAAAAVARDSAASRRA-GSATSSFEAAGDAAAAKVVAMPGFTGQYESGEGSDSEAASGRNDGGTXXXXXXXXXXXXXXXXXVVALTAQEVFKEVGKAAKKKPGRFPHRGKWTVRNNLMLMTVATKHEVWCVPGAQKTVAEKWADAHEDLEQEPYVRVFGNAT-----------------------HASGSGNTSADELDEDEAQLEKLLIQVVDAKASVKTVQRQERLKNTDRNVLGAAAARMGNRRCLPGGGATSFGAARERDEQEIRNILLNR------TAGGSAASGLSSPXXXXXXXXXXXXXXXXXXXVS-------------VSPLGDELSSEMGVVDLDKLGKAAGATTDEINLFVNTGFLVDDMDRGVAVKIMEEVIKSRFNKLWGGRGMLDYIEHERSSDDGG--------SEVVGL---GELCLAGLCLNYGIEETKFNNVDIRARWFVKGWPFNESPTVLAHGRLVKALASILV 1411
            R SSR   P+ K LA  A +R +AA R A  S+ +SF AAGD  A KV+++ G     +  E SD+E                           VVA+           A KKK    P   KW++ ++L LM  A KH+ W V G    V ++WA   EDL +EPYVRVFG+ T                        ASG+GNTSAD+L+ DEA++EKL+  V+DA+   +   +QE+ +    N+LG +A  MGN RC PG  ATSFG A   DE+ +  ++ +R      T  GS  SG SSP                XXX                 PLG  L++ +    ++ L    G T ++ +LF+N GF  D +   VA ++ME VI      L  G+ +  ++    ++D+          S+  GL   G L  A L ++Y  +   F  +    R+ + GWP  E P+      L +ALAS LV
Sbjct:    4 RQSSRVVTPTEKVLALEA-SRQTAARREADNSSRTSFRAAGDGHAQKVMSLGGEETPVQE-EDSDAE---------------------------VVAVANPS---SAASAGKKKKRVSP---KWSMWSDLTLMKHAIKHKTWRVAGLTDRVEDRWALVVEDLSKEPYVRVFGSKTVKHLKSRFDSHIRAQAKKNEEAAKASGAGNTSADDLEGDEAEMEKLVQSVLDARTGERADSQQEKARKAGHNLLGQSAIDMGNSRCGPGAAATSFGEAHASDERRMSGVIDSRGRMPGFTPSGSG-SGRSSPANIGGVVGFGSGGGSGXXXXXXXXXXXXXGGVTLTPPLGSPLANLLRAPTMEILASKVGVTREQADLFLNAGFRPDQIPHDVATRMMESVIAGYLMGLRDGKSVDRFVRDIVAADEDAYGMDPVDTSKAPGLDRRGNLTHA-LFVHYNQDYPAFRVLPHAERYRL-GWPVLEEPSDEIFDGLTRALASRLV 463          
BLAST of mRNA_P-littoralis_Contig894.3.1 vs. uniprot
Match: A0A6H5KK82_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK82_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 1.130e-31
Identity = 139/411 (33.82%), Postives = 196/411 (47.69%), Query Frame = 2
Query:  422 GRFPHRGKWTVRNNLMLMT-----VATKHEVWCVPGAQKTVAEKWADAHEDLEQEPYVRVFGN-----------------------ATHASGSGNTSADELDEDEAQLEKLLIQVVDAKASVKTVQRQERLKNTDRNVLGAAAARMGNRRCLPGGGATSFGAARERDEQEIRNILLNRTAGG-------SAASGL--------------------SSPXXXXXXXXXXXXXXXXXXX---------------VSVSPLGDELSSEMGVVDLDKLGKAAGATTDEINLFVNTGFLVDDMDRGVAVKIMEEVIKSRFNKLWGGRGMLDYIEHERSSDDGG--------SEVVGL---GELCLAGLCLNYGIEETKFNNVDIRARWFVKGWPFNESPTVLAHGRLVKALASILV 1411
            GR  + GKW    +LML+T     +A +H+ W V G   TV ++W   + +L  EP VR  G+                       A   SG GNTS D+LD DEA+LEKLLI VVDAKA+ +   +QE+ +   +N+LG AA  MGN RC PG  ATSFG A   DE+ +  +  NRT G         + SG                     SSP   XXXXXXXXXXXXXXXX               + V PLG  L++ +    +++L   A  T ++ +LF+N GF  D +   VA ++ME VI    + L G + +  +++    +D+          ++V GL   G+L  A L +NY  +   F  +  +A  +  GW   E P+      L +ALA+ LV
Sbjct:  153 GRKRNSGKWNTGQDLMLLTSVDPSLAVRHKTWRVAGVTGTVEDRWGLVYAELNSEPQVRALGDKPLKSLVLRFNQLVRVQTAKNNDAARESGVGNTSGDDLDGDEAKLEKLLIAVVDAKAAERAGSQQEKARKAGQNLLGQAAIDMGNSRCGPGATATSFGEAHASDERRMEGV--NRTKGRMPGFTQPDSRSGXXXXXXXXXXXXXXXXXXXXRSSPATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIPVPPLGGALANLLRAPTIERLASKANVTPEQADLFLNAGFRPDQIPYDVATRMMETVIAGYLSALRGNQSVETFVKEVIEADEDADGFQPVATTKVPGLDRAGDLTNA-LFVNYKQDFNAFGILP-KAYKYRSGWLVEEGPSDKVFDGLTRALAARLV 559          
BLAST of mRNA_P-littoralis_Contig894.3.1 vs. uniprot
Match: A0A6H5JZN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZN9_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 3.730e-31
Identity = 136/425 (32.00%), Postives = 193/425 (45.41%), Query Frame = 2
Query:  422 GRFPHRGKWTVRNNLMLMT-----VATKHEVWCVPGAQKTVAEKWADAHEDLEQEPYVRVFGN-----------------------ATHASGSGNTSADELDEDEAQLEKLLIQVVDAKASVKTVQRQERLKNTDRNVLGAAAARMGNRRCLPGGGATSFGAARERDEQEIRNILLNRTAGGSAASGLSSPXXXXXXXXXXXXXXXXXXX--------------------------------------------------------VSVSPLGDELSSEMGVVDLDKLGKAAGATTDEINLFVNTGFLVDDMDRGVAVKIMEEVIKSRFNKLWGGRGMLDYIEHERSSDDGG--------SEVVGL---GELCLAGLCLNYGIEETKFNNVDIRARWFVKGWPFNESPTVLAHGRLVKALASILV 1411
            GR  + GKW    +LML+T     +A +H+ W V G   TV ++W   + +L  EP+VR FG+                       A  ASG GNTS D+LD DEA+LEKLLI VVDAKA+ +   +QE+ +   +N+LG AA  MGN RC PG  ATSFG A   DE+ +  +  NRT G     G + P     XXXXXXXXXXXXXX                                                        + V PLG  L++ +    +++L   A  T ++ +LF+N GF  D +   VA ++ME VI    + L G + +  +++    +D+          ++V GL   G+L  A L +NY  +   F  +   A  +  GW   E P+      L +ALA+ LV
Sbjct:   88 GRKRNSGKWNTGQDLMLLTSVDPSLAVRHKTWRVAGVTGTVEDRWGLVYAELNSEPHVRAFGDKPLKNLVSRFNQLVRVQTAKNNDAARASGVGNTSGDDLDGDEAKLEKLLIAVVDAKAAERAGSQQEKARKAGQNLLGQAAIDMGNSRCGPGATATSFGEAHASDERRMEGV--NRTKG--RMPGFTQPDSRSGXXXXXXXXXXXXXXXXXXXXXXXXIGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIPVPPLGGALANLLRAPTIERLASKANVTPEQADLFLNAGFRPDQIPYDVATRMMETVIAGYLSALRGNQSVETFVKEVIEADEDADGFQPVATTKVPGLDRAGDLTNA-LFVNYKQDFNAFGILP-NAYKYRSGWLVEEGPSDKIFDGLTRALAARLV 506          
BLAST of mRNA_P-littoralis_Contig894.3.1 vs. uniprot
Match: D7FL52_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL52_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 1.340e-30
Identity = 148/480 (30.83%), Postives = 213/480 (44.38%), Query Frame = 2
Query:  140 RDSAASRRAG-SATSSFEAAGDAAAAKVVAMPGFTGQYESGEGSDSEAASGRNDGGTXXXXXXXXXXXXXXXXXVVALTAQEVFKEVGKAAKKKPGRFPHRGKWTVRNNLMLMTVATKHEVWCVPG--AQKTVAEKWADAHEDLEQEPYVRVFGNAT-----------------------HASGSGNTSADELDEDEAQLEKLLIQVVDAKASVKTVQRQERLKNTDRNVLGAAAARMGNRRCLPGGGATSFGAARERDEQEIRNILLNR------TAGGSAASGLSSPXXXXXXXXXXXXXXXXXXXVS-------------VSPLGDELSSEMGVVDLDKLGKAAGATTDEINLFVNTGFLVDDMDRGVAVKIMEEVIKSRFNKLWGGRGMLDYIEHERSSDDGG--------SEVVGL---GELCLAGLCLNYGIEETKFNNVDIRARWFVKGWPFNESPTVLAHGRLVKALASILV 1411
            R +AA R AG S+ +SF AAGD  A KV+++ G     + GE SD+E                           VVA+           A KKK    P   KW+  ++L LM    KH      G   + +V ++WA   EDL +EPYVRVFG+ T                        ASG+GNTSAD+L+ DEA+LEKL+   VD++A  +   RQE+ +   +N+LG +A  MGN RC PG  AT+FG A   +E+ +  ++ NR      T  GS  SG SSP                 XX                 PLG  L++ +    +++L    G T ++ +LF+N GF  D +   VA ++ME+VI   F  L  G+ +  Y+    ++D+          S+  GL   G L  A L  +Y  +      +    R+ + GW   E P+      L + LAS LV
Sbjct:   14 RQTAARREAGDSSCASFRAAGDGHAQKVMSLGGEETPVQ-GEDSDAE---------------------------VVAVANPS---SAASAGKKKKRVSP---KWSTWSDLTLM----KHAQDLASGWPDRHSVEDRWALVVEDLNKEPYVRVFGSKTVKHLKSRFDSHIRAQTKKNEEAAKASGAGNTSADDLEGDEAELEKLVQSAVDSRAGERADSRQEKARKAGQNLLGLSAIDMGNSRCGPGAAATTFGEAHASEERRMSGVIDNRRRMPGFTPSGSG-SGRSSPANIGGVAGFGSGSGNSSXXXXXXXXXXXXXXVTLTPPLGSTLAALLRAPTIERLASKVGVTREQADLFLNVGFRPDQIPHDVATRMMEDVIADYFMGLRDGKSVDAYVRDIVAADEDADGMDPVDTSKAPGLDRFGNLTHA-LFAHYNQDYASSTVLPYAERYRL-GWLVLEGPSDEIFDGLTRTLASRLV 452          
BLAST of mRNA_P-littoralis_Contig894.3.1 vs. uniprot
Match: A0A6H5JPE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPE7_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 5.560e-21
Identity = 89/336 (26.49%), Postives = 144/336 (42.86%), Query Frame = 2
Query:  488 KHEVWCVPGAQKTVAEKWADAHEDLEQE-PYVRVF-----------------------GNATHASGSGNTSADELDEDEAQLEKLLIQVVDAKASVKTVQRQERLKNTDRNVLGAAAARMGNRRCLPGGGATSFGAARERDEQEIRNILLNR--TAGGSAASGLSSPXXXXXXXXXXXXXXXXXXXVSVSPLGDELSSEMGVVDLDKLGKAAGATTDEINLFVNTGFLVDDMDRGVAVKIMEEVIKSRFNKLWGGRGMLDYIEHERSSDDGGSEVVGLGELCLAGLCLNYGIEETKFNNVDIRARWFVKGWPFNES--PTVLAHGRLVKALASILV 1411
            K + W V G ++TV ++W    +++  E P+  +F                         A   +G G+  ++ L EDE +LEK+L  +VDAKA ++  +R E+ K  +    G A  +   RRC PG G+TSFGAA   DE+    +L     TAG   AS                          + PLG ++  ++   +   L    GATT++++L +  GF  + +    AV I+E+ + +R    WG   + D+   + +    G E+ G     +  LC  YG +   F   D R   +  GW   +   PT      L + LA++LV
Sbjct:    7 KFQCWQVRGRKETVPQQWLKTDKEIRGEGPWNNIFEGISDTAIISKFTAMVSEKTGAENKAAATTGGGDDGSENLGEDEIKLEKVLGAIVDAKAGLRAEKRIEKEKLANIRAAGLAEKQNAERRCAPGAGSTSFGAAHASDERARAKVLQRELSTAGSQRAS------------------EGGGAARKLPPLGADIQKKLSAQNEVDLAYITGATTEQVDLVLTKGFTQEQLPLETAVCILEQAVGNRLRAPWGNLSLQDFSVVKGA----GFEISGFDAYMVKELCDKYGADYQLFMACD-RVSVYTDGWTVGDPGCPTEEELDGLSEKLATLLV 319          
BLAST of mRNA_P-littoralis_Contig894.3.1 vs. uniprot
Match: A0A6H5JS18_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS18_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 3.580e-20
Identity = 89/336 (26.49%), Postives = 143/336 (42.56%), Query Frame = 2
Query:  488 KHEVWCVPGAQKTVAEKWADAHEDLEQE-PYVRVF-----------------------GNATHASGSGNTSADELDEDEAQLEKLLIQVVDAKASVKTVQRQERLKNTDRNVLGAAAARMGNRRCLPGGGATSFGAARERDEQEIRNILLNR--TAGGSAASGLSSPXXXXXXXXXXXXXXXXXXXVSVSPLGDELSSEMGVVDLDKLGKAAGATTDEINLFVNTGFLVDDMDRGVAVKIMEEVIKSRFNKLWGGRGMLDYIEHERSSDDGGSEVVGLGELCLAGLCLNYGIEETKFNNVDIRARWFVKGWPFNES--PTVLAHGRLVKALASILV 1411
            K + W V G ++TV ++W  A +++  E P+  +F                         A   +G G   ++ L EDE +LEK+   +VDAKA ++  +R E+ K  +    G A  +   RRC PG G+TSFGAA   DE+    +L     TAG   AS                          + PLG ++  ++   +   L    GATT++++L +  GF  + +    AV I+E+ + +R    WG   + D+   + +    G E+ G     +  LC  YG +   F   D R   +  GW   +   PT      L + LA++LV
Sbjct:   10 KFQCWQVRGRKETVPQQWLKADKEIRGETPWNIMFEGISDTAIISKFTAMVSEKTGAENKAAATTGGGEDGSENLGEDEIKLEKVRGAIVDAKAGLRAEKRIEKEKLANIRAAGVAEKQNAERRCAPGAGSTSFGAAHASDERARAKVLQRELSTAGSQRAS------------------EGGGAARKLPPLGADIQKKLSAQNEVDLAYITGATTEQVDLVLTKGFTQEQLPWETAVCILEQAVGNRLRAPWGNLSLHDFSVVKGA----GFEIGGFDAYMVKELCDKYGADYQLFMACD-RVSVYTDGWTVGDPGCPTEEELDGLSEKLATLLV 322          
BLAST of mRNA_P-littoralis_Contig894.3.1 vs. uniprot
Match: A0A6H5KTA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA0_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 6.980e-9
Identity = 53/185 (28.65%), Postives = 84/185 (45.41%), Query Frame = 2
Query:  662 EKLLIQVVDAKASVKTVQRQERLKNTDRNVLGAAAARMGNRRCLPGGGATSFGAARERDEQEIRNILLNR--TAGGSAASGLSSPXXXXXXXXXXXXXXXXXXXVSVSPLGDELSSEMGVVDLDKLGKAAGATTDEINLFVNTGFLVDDMDRGVAVKIMEEVIKSRFNKLWGGRGMLDYIEHERS 1210
            EK+L  +VDAKA ++  ++ E+ K  +  V G A  +   RRC PG G+TSFGAA   DE+    +L     TAG   AS                          + PLG ++ S     +    G    ATT++++L +  GF  + +    AV I+E+ + +R    WG   + D+   +R+
Sbjct:   64 EKVLGAIVDAKAGMRAEKKIEKEKLANIRVAGLAEKQNAERRCAPGAGSTSFGAAHASDERARAKVLQRELSTAGSQRAS------------------EGGGAARKLPPLGADIXSGQARGE----GLHGRATTEQVDLVLTKGFTQEQLPLETAVCILEQAVGNRLRAPWGNLSLQDFSVVKRA 226          
BLAST of mRNA_P-littoralis_Contig894.3.1 vs. uniprot
Match: A0A6H5KHG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG7_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 6.170e-6
Identity = 65/254 (25.59%), Postives = 100/254 (39.37%), Query Frame = 2
Query:  662 EKLLIQVVDAKASVKTVQRQERLKNTDRNVLGAAAARMGNRRCLPGGGATSFGAARERDEQEIRNILLNR--TAGGSAASGLSSPXXXXXXXXXXXXXXXXXXXVSVSPLGDELSSEMGVVDLDKLGKAAGATTDEINLFVNTGFLVDDMDRGVAVKIMEEVIKSRFNKLWGGRGMLDYIEHERSSDDGGSEVVGLGELCLAGLCLNYGIEETKFNNVDIRARWFVKGWPFNES--PTVLAHGRLVKALASILV 1411
            EK+L  +VDAKA ++  +R E+ K  +    G A  +   RRC PG G+TSFGAA   DE+    +L     TAG   AS                          + PLG ++  ++   +   L    GATT++++L +  GF  + +    A           F+ + G                 G ++ G     +  LC  YG +   F   D R   +  GW   +   PT      L + LA++LV
Sbjct:    3 EKVLGAIVDAKAGLRAEKRIEKGKLANIRAAGLAEKQNAERRCAPGAGSTSFGAAHASDERARAKVLQRELSTAGSQRAS------------------EGGGAARKLPPLGADIQKKLSAQNEVDLAYITGATTEQVDLVLTKGFTQEQLPLETA----------DFSVVKGA----------------GFQISGYDAYMVKELCDKYGADYQLFMACD-RVSVYTDGWTVGDPGCPTEEELDGLSEKLATLLV 211          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig894.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G106_ECTSI5.410e-3631.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KK82_9PHAE1.130e-3133.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZN9_9PHAE3.730e-3132.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL52_ECTSI1.340e-3030.83Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5JPE7_9PHAE5.560e-2126.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JS18_9PHAE3.580e-2026.49Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KTA0_9PHAE6.980e-928.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHG7_9PHAE6.170e-625.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig894contigP-littoralis_Contig894:23868..27558 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1839
Hectar predicted targeting categorymitochondrion
Exons5
Cds size1596
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig894.3.1prot_P-littoralis_Contig894.3.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig894 23935..27382 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791783.5114677-UTR-P-littoralis_Contig894:23867..239341680791783.5114677-UTR-P-littoralis_Contig894:23867..23934Pylaiella littoralis U1_48UTRP-littoralis_Contig894 23868..23934 +
1680791783.5848591-UTR-P-littoralis_Contig894:27382..275581680791783.5848591-UTR-P-littoralis_Contig894:27382..27558Pylaiella littoralis U1_48UTRP-littoralis_Contig894 27383..27558 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791783.524156-CDS-P-littoralis_Contig894:23934..243491680791783.524156-CDS-P-littoralis_Contig894:23934..24349Pylaiella littoralis U1_48CDSP-littoralis_Contig894 23935..24349 +
1680791783.5367112-CDS-P-littoralis_Contig894:25295..254081680791783.5367112-CDS-P-littoralis_Contig894:25295..25408Pylaiella littoralis U1_48CDSP-littoralis_Contig894 25296..25408 +
1680791783.550078-CDS-P-littoralis_Contig894:25477..255431680791783.550078-CDS-P-littoralis_Contig894:25477..25543Pylaiella littoralis U1_48CDSP-littoralis_Contig894 25478..25543 +
1680791783.5607777-CDS-P-littoralis_Contig894:26121..270431680791783.5607777-CDS-P-littoralis_Contig894:26121..27043Pylaiella littoralis U1_48CDSP-littoralis_Contig894 26122..27043 +
1680791783.573277-CDS-P-littoralis_Contig894:27302..273821680791783.573277-CDS-P-littoralis_Contig894:27302..27382Pylaiella littoralis U1_48CDSP-littoralis_Contig894 27303..27382 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig894.3.1

>prot_P-littoralis_Contig894.3.1 ID=prot_P-littoralis_Contig894.3.1|Name=mRNA_P-littoralis_Contig894.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=532bp
MPPVRFSSRPPAPSAKALAAAAVARDSAASRRAGSATSSFEAAGDAAAAK
VVAMPGFTGQYESGEGSDSEAASGRNDGGTGASGEGEEEEEEEEEEEVVA
LTAQEVFKEVGKAAKKKPGRFPHRGKWTVRNNLMLMTVATKHEVWCVPGA
QKTVAEKWADAHEDLEQEPYVRVFGNATHASGSGNTSADELDEDEAQLEK
LLIQVVDAKASVKTVQRQERLKNTDRNVLGAAAARMGNRRCLPGGGATSF
GAARERDEQEIRNILLNRTAGGSAASGLSSPASSRSSPASGRPSPATPPP
VSVSPLGDELSSEMGVVDLDKLGKAAGATTDEINLFVNTGFLVDDMDRGV
AVKIMEEVIKSRFNKLWGGRGMLDYIEHERSSDDGGSEVVGLGELCLAGL
CLNYGIEETKFNNVDIRARWFVKGWPFNESPTVLAHGRLVKALASILVGE
HYGDGSGTTIGHGDDEDTGMGGGGGVGLWMEAQVDRARTRSPVETFRRKK
RAISKEPCKSRCVRRERWPTLERTGKTSGRT*
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mRNA from alignment at P-littoralis_Contig894:23868..27558+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig894.3.1 ID=mRNA_P-littoralis_Contig894.3.1|Name=mRNA_P-littoralis_Contig894.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3691bp|location=Sequence derived from alignment at P-littoralis_Contig894:23868..27558+ (Pylaiella littoralis U1_48)
CCGCCAAAGCTGAAAACTGATTTTTTTTCAGCTTGGACCCGGTGCGATCA CACCTTGTCCAGCAACGATGCCACCTGTGAGGTTCAGCTCGAGGCCACCG GCTCCATCCGCCAAGGCCCTGGCCGCTGCAGCCGTTGCTCGTGATTCTGC GGCCTCACGGCGTGCAGGCAGCGCTACTTCGTCATTCGAGGCAGCAGGTG ACGCTGCTGCGGCGAAGGTGGTTGCGATGCCAGGGTTCACCGGACAGTAC GAATCAGGGGAGGGGTCTGACAGCGAGGCTGCCAGCGGGAGGAACGATGG CGGCACCGGGGCGAGTGGCGAGGGAGAGGAAGAGGAGGAGGAGGAGGAGG AGGAGGAGGTGGTGGCTCTTACTGCGCAGGAGGTGTTCAAGGAGGTGGGC AAGGCAGCGAAGAAGAAGCCGGGAAGGTTTCCCCACCGCGGGAAGTGGAC TGTGCGGAACAACCTGATGCTCATGACTGTAGGTGAGAAAACTATGACGT GCGTTAGGGTCGCGTACTTGTTGTTTGCAGCTATTGGTGTGCTCCTGTGC ACCAGGCTGCGGTCATCCGTAGTCGCCGCCCAAAAGGTACAGCAAGCAGC GACCTACGTGTTTGCTGCTTCCGCTAGTGAGTATGCTGTGTTAAAAGAAA GCACGAATGTCCTAACGCACATCCATACAGCAGTATACTCTGCTGTATAG GTCATCCATACAGCAGTACTCACAGCACTCTTAGGTAGCAGGTGTGCAGA CTACAACAACCTGCAGTTTTACACAGAGATTTTATACACAGCAGCGGTGC CGCTTTCGCGTGTGCTTCTTCGGAGTGCGTGTGTGTGCTTGTGTGTGCTA TTTGTGTGTACCGTTTGTGTGTGCTACTGCTGCTGCTGCTGTACGTGTGT CGACAGCTGCATGTTTACACCACATACGGTGCCGCTTTTGCGTGTGCTTC TGCGGAGTGTGTGTGTGTGTGTGCTGTGTGTTTGCTTGTGTGTGTGCTAT TTGTGTGTACCGTTTGTGTTTGCTTCTAATGCTGCTGCTGTAGTGTGTCC ACAGCTGCATGTTTACACCACATATATTGCGTTGCTGCTGCTGCTGCGCA TCATTGGGCTCCTACACGTAGTAGCTGCTCTACTGTTTGGATCTGTTGTG AAGATATATAGATTCGTGATCGTTTCGTGTCAGGCGTGCCCCTTGCAGGT CAATATATTACACGCCCTAAGAGAGCCTTGGAACACTTGTTGTTCATGGT GTAACCCTTGCAACTCGTACACCCTCTCTGTTGTTTTTACTATTAAATCG TATCTTGCTAGGCGGGCTGCAAGGCAACCTAGCGGTTTATCTTATAGTGG TTGCTGTGTTTTATATGTTCCCTGCTGATATCAGAACATCTCGGTACTCT CACGTCAACTTGCTTGAAAAAATGACAGCTACAAAGCACGAGGTGTGGTG TGTCCCTGGGGCCCAGAAGACGGTGGCAGAGAAGTGGGCGGACGCTCATG AAGACCTCGAGCAAGAGCCGTACGTCCGGGTTTTCGGCAACGTGAGGAGG TCTGCGAGAGAGTCGCATTTTGACAACCTTGTTAAAAAGGCAAGCAAGCG GAACTCCGAGGCGACCCACGCTTCCGGTAGTGGCAACACATCCGCAGACG AGCTGGACGAAGATGAAGCTCAACTGGTGAGAACTAGATCGGGACAAGCA GCGCACTGTTTTCTGCACTAGCGGGGACAAAGATATGTGAAGTTACTTGG CACTGTTCACATGAGAGAATACATCCCTCTCAGAAAAGGGCACATATGTC AGTTATCCAAACGCTCAAACATTATCGCGCCGGTCTGCTTTCGTGTACCG TACCTTTTACGTGGTAAGAAGCATTCGCAGCAGAGCCCCCGCTCTTCTGG CAATGTACAGAAATACAATACACCTGCGCCAAGTTTGCAACGGGATGCGA ACGCTGCGACAGCAGCAGTATGAACCACGTGTTGTCGTGCATGAAAAAAA AACACAATTGGGACACCGTTGAGCCACAGCAGTGACAAGATAACATGTTG CCAAGGATAACAATAACTTGCAACAACAACAATGAACACTCCGTGTCTCG CGTACTCATTGATTCCGATGGCGGGGATTCATCGTGATGTCATTTTTCCC GGTGCCGTCAAACAAAAGCAAATGCCACCATGCAACACAATATCAAGAGC CGCCCGCTGCCCGCTGTTGCCCCCTTGTTTGCCCCCTTGTTTCGCCTTCA ACAGGAAAAACTGCTGATCCAGGTCGTAGATGCGAAAGCTAGCGTCAAGA CAGTTCAGCGTCAAGAGAGGTTGAAGAATACCGATAGAAATGTGCTGGGC GCTGCAGCAGCGAGAATGGGCAATCGCCGGTGCTTGCCGGGGGGAGGGGC CACTTCGTTTGGAGCTGCTCGTGAGCGTGATGAGCAGGAGATTCGCAACA TCTTGCTCAACCGTACAGCTGGGGGAAGTGCCGCCAGCGGCCTGTCCAGC CCTGCCAGCAGCCGGTCCAGCCCCGCCAGCGGCCGGCCCAGTCCCGCTAC ACCGCCTCCTGTCTCTGTTTCCCCTCTCGGAGATGAGCTCAGCTCCGAAA TGGGTGTGGTAGACCTGGACAAGCTTGGAAAAGCAGCTGGAGCCACGACC GACGAGATAAATCTTTTCGTTAACACTGGCTTCCTCGTGGATGACATGGA CCGTGGCGTAGCGGTTAAGATCATGGAGGAGGTGATCAAGAGCCGCTTCA ACAAACTTTGGGGCGGCCGAGGAATGCTCGACTACATCGAGCACGAGCGC AGCTCTGATGACGGTGGCTCTGAGGTAGTGGGGCTCGGTGAACTCTGCTT GGCCGGGCTTTGCCTAAACTACGGCATCGAGGAGACGAAGTTCAATAACG TTGACATCAGAGCCCGGTGGTTCGTTAAAGGGTGGCCCTTTAATGAGTCT CCGACAGTACTTGCGCACGGTCGTCTGGTCAAAGCCTTGGCATCTATCTT GGTGGGAGAGCACTACGGTGATGGCAGCGGCACCACCATTGGCCACGGCG ACGACGAGGACACGGGCATGGGTGGGGGAGGGGGGGTCGGCCTCTGGATG GAGGCCCAGGTCGACAGGGCAAGAACAAGAAGCCCCGTAGAAACGTTCAG AAGAAAGAAGAGAGCAATCTCGAAGGGTGAGCGTGTGTGTGTTTGTGTGT GTGTATTGGTCAAGAAAGGAGGACAGCCGTAAAAGACGTTGCTGTCTGCG GCTCGGTGTGTTCGTTAATTGCTTTTTGTAAGCGTGAGGTCAATTCCCAG GCTTGTTGGGGCTTTGCAACACTCGTGGTGTATACGGACGTGGTGTTTTG CGTGTTGGCCTAAAAACACGTCAACCCTCGTGCCGATTTTGCCGTTCGCA TACAATTTATTTCCGGTGGTTATCATTCGCGACAGAGCCATGCAAGAGTC GATGCGTGAGGCGAGAGAGATGGCCGACCTTAGAGAGGACAGGGAAGACA AGCGGCAGGACCTGAAGGAGGAAAGGAGGGAAAAGCAAGCCGCACAGCAA CTTGCGCTCAGGAAGATGGAGCTGGAATCCATGGAGAGACTGCGTGCTGA TGAGCGGAAGGAGGACCGCGCTGAAAACACCCGCCGGGAAAACGCCCAAA TTCAGCGCATGGAATCCGATAAGGCGGAACGGAGAGCGGAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig894:23868..27558+

>mRNA_P-littoralis_Contig894.3.1 ID=mRNA_P-littoralis_Contig894.3.1|Name=mRNA_P-littoralis_Contig894.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1596bp|location=Sequence derived from alignment at P-littoralis_Contig894:23868..27558+ (Pylaiella littoralis U1_48)
ATGCCACCTGTGAGGTTCAGCTCGAGGCCACCGGCTCCATCCGCCAAGGC
CCTGGCCGCTGCAGCCGTTGCTCGTGATTCTGCGGCCTCACGGCGTGCAG
GCAGCGCTACTTCGTCATTCGAGGCAGCAGGTGACGCTGCTGCGGCGAAG
GTGGTTGCGATGCCAGGGTTCACCGGACAGTACGAATCAGGGGAGGGGTC
TGACAGCGAGGCTGCCAGCGGGAGGAACGATGGCGGCACCGGGGCGAGTG
GCGAGGGAGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGGTGGCT
CTTACTGCGCAGGAGGTGTTCAAGGAGGTGGGCAAGGCAGCGAAGAAGAA
GCCGGGAAGGTTTCCCCACCGCGGGAAGTGGACTGTGCGGAACAACCTGA
TGCTCATGACTGTAGCTACAAAGCACGAGGTGTGGTGTGTCCCTGGGGCC
CAGAAGACGGTGGCAGAGAAGTGGGCGGACGCTCATGAAGACCTCGAGCA
AGAGCCGTACGTCCGGGTTTTCGGCAACGCGACCCACGCTTCCGGTAGTG
GCAACACATCCGCAGACGAGCTGGACGAAGATGAAGCTCAACTGGAAAAA
CTGCTGATCCAGGTCGTAGATGCGAAAGCTAGCGTCAAGACAGTTCAGCG
TCAAGAGAGGTTGAAGAATACCGATAGAAATGTGCTGGGCGCTGCAGCAG
CGAGAATGGGCAATCGCCGGTGCTTGCCGGGGGGAGGGGCCACTTCGTTT
GGAGCTGCTCGTGAGCGTGATGAGCAGGAGATTCGCAACATCTTGCTCAA
CCGTACAGCTGGGGGAAGTGCCGCCAGCGGCCTGTCCAGCCCTGCCAGCA
GCCGGTCCAGCCCCGCCAGCGGCCGGCCCAGTCCCGCTACACCGCCTCCT
GTCTCTGTTTCCCCTCTCGGAGATGAGCTCAGCTCCGAAATGGGTGTGGT
AGACCTGGACAAGCTTGGAAAAGCAGCTGGAGCCACGACCGACGAGATAA
ATCTTTTCGTTAACACTGGCTTCCTCGTGGATGACATGGACCGTGGCGTA
GCGGTTAAGATCATGGAGGAGGTGATCAAGAGCCGCTTCAACAAACTTTG
GGGCGGCCGAGGAATGCTCGACTACATCGAGCACGAGCGCAGCTCTGATG
ACGGTGGCTCTGAGGTAGTGGGGCTCGGTGAACTCTGCTTGGCCGGGCTT
TGCCTAAACTACGGCATCGAGGAGACGAAGTTCAATAACGTTGACATCAG
AGCCCGGTGGTTCGTTAAAGGGTGGCCCTTTAATGAGTCTCCGACAGTAC
TTGCGCACGGTCGTCTGGTCAAAGCCTTGGCATCTATCTTGGTGGGAGAG
CACTACGGTGATGGCAGCGGCACCACCATTGGCCACGGCGACGACGAGGA
CACGGGCATGGGTGGGGGAGGGGGGGTCGGCCTCTGGATGGAGGCCCAGG
TCGACAGGGCAAGAACAAGAAGCCCCGTAGAAACGTTCAGAAGAAAGAAG
AGAGCAATCTCGAAGGAGCCATGCAAGAGTCGATGCGTGAGGCGAGAGAG
ATGGCCGACCTTAGAGAGGACAGGGAAGACAAGCGGCAGGACCTGA
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