prot_P-littoralis_Contig893.12.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig893.12.1
Unique Nameprot_P-littoralis_Contig893.12.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length399
Homology
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BLAST of mRNA_P-littoralis_Contig893.12.1 vs. uniprot
Match: A0A6H5JTK7_9PHAE (F5/8 type C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK7_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 5.670e-59
Identity = 113/194 (58.25%), Postives = 138/194 (71.13%), Query Frame = 0 
Query:   16 MALFGKARPLLILLPLVFVGWIQLAGGAEQEATGVTATASMYDTRSSGAIDDFSGCYDDGCGPELTIDGLLNDEPESRWSCSESLSDTGMACYITYDLGSSFSLVKMSIYFYKSDDLDRTPNPFDISTSDDGTTFADSFDGENTPGTAIGVAQDFDFPTGASGQHVRLTAVLDADQWLSINEAIIYVDVVTPSP 209
            M L  KA+PLL+ L L  +G ++LAGG EQ+A   + TA+ YDTR+S    D +GC  DGC P+L  DG LND PESRWSC  +L+ T   CY T+DLGSS SL K++IYFYK DD+DR  NPF +STS DGTT+  SF+  NT  TAIG  +DF FPTG+SG++VR T  L  DQWLSINEA IYVDV TP+P
Sbjct:    1 MVLLRKAKPLLVALSLA-LGGVRLAGGVEQKAE-YSVTATKYDTRAS----DSNGCGTDGCSPDLMNDGDLNDVPESRWSCETALAGTEFECYATFDLGSSQSLTKLTIYFYKCDDVDRATNPFIVSTSTDGTTYTTSFEDVNTIPTAIGAGEDFAFPTGSSGRYVRFTGELADDQWLSINEAEIYVDVATPAP 188
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BLAST of mRNA_P-littoralis_Contig893.12.1 vs. uniprot
Match: D7FRB9_ECTSI (F5/8 type C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRB9_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 9.380e-43
Identity = 77/129 (59.69%), Postives = 94/129 (72.87%), Query Frame = 0 
Query:   83 DGLLNDEPESRWSCSESLSDTGMACYITYDLGSSFSLVKMSIYFYKSDDLDRTPNPFDISTSDDGTTFADSFDGENTPGTAIGVAQDFDFPTGASGQHVRLTAVLDADQWLSINEAIIYVDVVTPSPTA 211
            DG LND P+SRWSC  +L  T   CY T+DLGSS SL+K++IYFYKS++ DR  NPF +STS DGTTF  SF+  NT  T +G  +DF FPTG+SG++VR T  L  DQWLS+NE  IYVDV TP+P A
Sbjct:    3 DGNLNDVPDSRWSCETALEGTEFECYATFDLGSSQSLIKLTIYFYKSNEEDRVTNPFVVSTSTDGTTFTTSFEDINTIPTPLGEGEDFAFPTGSSGRYVRFTGDLADDQWLSVNEVEIYVDVATPAPVA 131
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig893.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JTK7_9PHAE5.670e-5958.25F5/8 type C domain-containing protein n=1 Tax=Ecto... [more]
D7FRB9_ECTSI9.380e-4359.69F5/8 type C domain-containing protein n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.260coord: 43..204
e-value: 1.1E-15
score: 59.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 237..350
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 315..331
IPR000421Coagulation factor 5/8 C-terminal domainPFAMPF00754F5_F8_type_Ccoord: 77..194
e-value: 5.5E-8
score: 33.0
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 68..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig893contigP-littoralis_Contig893:34315..54631 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig893.12.1mRNA_P-littoralis_Contig893.12.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig893 34279..58124 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig893.12.1 ID=prot_P-littoralis_Contig893.12.1|Name=mRNA_P-littoralis_Contig893.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=399bp
MFFTGKSRERKAFGNMALFGKARPLLILLPLVFVGWIQLAGGAEQEATGV
TATASMYDTRSSGAIDDFSGCYDDGCGPELTIDGLLNDEPESRWSCSESL
SDTGMACYITYDLGSSFSLVKMSIYFYKSDDLDRTPNPFDISTSDDGTTF
ADSFDGENTPGTAIGVAQDFDFPTGASGQHVRLTAVLDADQWLSINEAII
YVDVVTPSPTAAIPSLEPTSAPTTTAATPPPVGITIDVATPSPAMGGMTA
APSAADPDTPGPAAAADPSTAPVAPTSPPSTPAPSVDGADPTAPTTSPTP
AVSPGAATPAPTPGSRGDDDSSPTPGLTRAPVGNVTPSEAPVVVGSTGGG
GGDSSESTYIIVGGVVGGAVVLLLIGVIAYKIRKVPPPPSYDDLNPGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000421FA58C
IPR008979Galactose-bd-like_sf