mRNA_P-littoralis_Contig10.139.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig10.139.3
Unique NamemRNA_P-littoralis_Contig10.139.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig10.139.3 vs. uniprot
Match: A0A6H5KUZ7_9PHAE (Iwr1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUZ7_9PHAE)

HSP 1 Score: 472 bits (1214), Expect = 4.620e-152
Identity = 364/726 (50.14%), Postives = 412/726 (56.75%), Query Frame = 1
Query:   58 MSHAPFRRKSRQAVEAAIS-HAASRK---PAPHLVVLRVKRKRGDAAVESLLVAPEERGYSEKEADM-PDRKRRAAHGAGSVEETLANLSLDAAADQHDKHQQQRN------------MRQPPKNRLCYKRVRTTEPDGSSNDDRSKEQHPSTPSVVAPPPNQ--AALGGDTSAPTVGGGDTWSGDGGRLDSLLSSRA---NSAFVSPPPRPAAVVDFMEVRRVRARAVTNARANSTNGGSPSARGGCEQQQPMKPSTGVASAVGSGNAAADFHVIDLQAVSLRD-NADMDVSSGVDKGEAFKGGA---PAKRTAAPILTPVERQMDEAIFTAFQTADMSNLRDVLTTSSSPSPAIVNYRRRLGDATTALMAAAFHGHLDTVRHLLSLGAKASLVDASGKSAALFAGMGGHRECFAELQRTADEEEGEQRALSKKHSSLKGGGGSGGR---DFVYDLYYFEPSASTSPTGGAPALERDGPYA----------TPTGRSKVGEKTP--DTSGGEPPVVRLCGIGPVDENAVGT-TADVELEFEHDSDWSELGN-GDDGEDPDSNSEGYYGNDYPEDEGDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEPYCRRVVETPTD-------------------------------------EDGISGDMGVSRSVESMPQALG---------DTALESTFHEGLGNANVFAWAPKR 1968
            MS AP RRKSR+AV AA+  +AAS+K   PAPHLVVLRVKRKRGDAAVESLLVA  + G   +E +M P+RKRRAA G  S+ ET+A LSLD  A+   + QQQ +            ++     RL YKRVRTTEPDGS   DR +E    +P   APP  Q  A  GG+       GG       GRLD+LL S+    NSA  SPPP  AAV D++EVRRV+ARAV     NS      S RGG  +Q P   S+G+A    +  A A+ HVIDL AV   D +A MD     D G A  GGA    AKR AAPILTPVERQMDEAIFTAFQT DMS+LRD+LTTSS PSPA VNYRRRLGDA+TALMAAAFHG L TVR+LLS+GAKA+LVDA G+SAALFAGM GHRECFAELQR AD+EE                         DFVYDLY++EP A  S T G PA+    P A           PT   ++GEKT      GG PPVVRL GIGPVDENAVGT  A VELEFEHDSDWS LG  GDDGEDPDSNSEGYYGNDYPEDEGDE                                         NEP+ RRVV+   +                                         SG +GV   V+ MP A G          T+ ES FH GLG A VFAW PKR
Sbjct:    1 MSQAPVRRKSRKAVAAAMEKNAASQKKPAPAPHLVVLRVKRKRGDAAVESLLVATTDEGERIEEQEMMPNRKRRAA-GTISIAETMAVLSLDKTAE--SQRQQQHSPXXXXXXXXXPAVKMQSPRRLVYKRVRTTEPDGSR--DRGEEGR--SPVAGAPPARQKRALDGGEE------GGXXXXXXXGRLDALLRSKGLNTNSASCSPPPPTAAVFDYLEVRRVKARAVGIVPKNSPAPVDSSGRGG-HKQHPSPQSSGLAPEGAATAAPANLHVIDLHAVGQADASAMMDTLVMGDAGAA--GGAHVATAKRAAAPILTPVERQMDEAIFTAFQTGDMSSLRDILTTSSYPSPAGVNYRRRLGDASTALMAAAFHGDLGTVRYLLSIGAKATLVDAHGRSAALFAGMRGHRECFAELQRVADQEEXXXXXXXXXXXXXXXXXXXXXXXXXDFVYDLYFYEPPAQAS-TVGPPAVGAPAPGAGEGAGTPSGAVPTSSGELGEKTTIDAADGGAPPVVRLSGIGPVDENAVGTMAAGVELEFEHDSDWSGLGEEGDDGEDPDSNSEGYYGNDYPEDEGDEEGAGISPYVYAGGSGSSCASENGSSSSDGNAGFDSDSD---NEPHYRRVVDVHEEFSRNFGSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXARRSGSGVVGVDGFVKRMPLASGRGDGRDGATGTSAESEFHAGLGEAGVFAWGPKR 706          
BLAST of mRNA_P-littoralis_Contig10.139.3 vs. uniprot
Match: D7FQE4_ECTSI (Heat shock protein, mitochondrial protein import, putative mitochondrial translocase complex subunit, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQE4_ECTSI)

HSP 1 Score: 387 bits (994), Expect = 5.150e-120
Identity = 266/455 (58.46%), Postives = 290/455 (63.74%), Query Frame = 1
Query:  373 PKNRLCYKRVRTTEPDGSSNDDRSKEQHPSTPSVVAPPPNQAALGGDTSAPTVGGGDTWSGDGGRLDSLLSSRA---NSAFVSPPPRPAAVVDFMEVRRVRARAVTNARANSTNGGSPSARGGCEQQQPMKPSTGVASAVGSGNAAADFHVIDLQAVSLRDNADM-DVSSGVDKGEAFKGGA---PAKRTAAPILTPVERQMDEAIFTAFQTADMSNLRDVLTTSSSPSPAIVNYRRRLGDATTALMAAAFHGHLDTVRHLLSLGAKASLVDASGKSAALFAGMGGHRECFAELQRTADEEEGEQRALSKKHSSLKGGGGSGGR---DFVYDLYYFEPSASTSPTG----GAPALERDGPY-----ATPTGRSKVGEKTPDTS---GGEPPVVRLCGIGPVDENAVGT-TADVELEFEHDSDWSELGN-GDDGEDPDSNSEGYYGNDYPEDEGDE 1665
            P  RL YKRVRTTEPDGS   DR  E  P           +A  GG+       GG       GRLD+LL S+    N A  SPPP  AAV D++EVRRV+ARAV   R NS      S RGG EQ  P   S+G+AS   +  A A+ HVIDL AV   D + M D S   D G A  GGA    AKR AAPILTP ERQMD+AIFTAFQT DMS+LRD+LTTSS PSPA VNYRRRLGDA+TALMAAAFHG L TVRHLLS+GAKA+LVDA G+SAALFAGM GHRECFAELQR AD+EE                         DFVYDLYY+EP+A  S  G    GAPA            A PT   K+GEK    +   GG PPVVRL GIGPVDENAVGT  A VELEFEHDSDWS LG  GDDGEDPDSNSEGYYGNDYPEDEGDE
Sbjct:    3 PPRRLVYKRVRTTEPDGSR--DRGDEGRPPVAGTPIARQKRALDGGEE------GGGXXXXXXGRLDALLRSKGLNTNYASCSPPPPTAAVFDYLEVRRVKARAVGIVRKNSPAPADSSGRGGHEQD-PSPQSSGLASDGAATAAPANLHVIDLHAVGQADASTMMDTSVMGDAGAA--GGAHVSTAKRAAAPILTPAERQMDKAIFTAFQTGDMSSLRDILTTSSYPSPAGVNYRRRLGDASTALMAAAFHGDLGTVRHLLSIGAKATLVDAHGRSAALFAGMRGHRECFAELQRVADQEEXXXXXXXXXXXXXXXXXXXXXXXXXDFVYDLYYYEPAAQASTVGPPAVGAPAXXXXXXXXXPSAAVPTSCGKLGEKQTTINAAGGGAPPVVRLSGIGPVDENAVGTMAAGVELEFEHDSDWSGLGEEGDDGEDPDSNSEGYYGNDYPEDEGDE 446          
BLAST of mRNA_P-littoralis_Contig10.139.3 vs. uniprot
Match: A0A835YSD4_9STRA (Alkaline-phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSD4_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.330e-15
Identity = 96/261 (36.78%), Postives = 127/261 (48.66%), Query Frame = 1
Query:  901 GAPAKRTAAPILTPVERQMDEAIFTAFQTAD-MSNLRDVLTTSSSPSPAIVNYRRRLGDATTALMAAAFHGHLDTVRHLLSLGAKASLVDASGKSAALFAGMGGHRECFAELQRTADEEEGEQRALSKKHSSLKGGGGSGGRDFVYDLYYFEPSASTSPTGGAPALERDGPYATPTGRSKVGEKTPDTSGGEPPVVRLCGIGPVDENAVGT------TAD--VELEFEHDSDWSELGNGDDGEDPDSNSEGYYGNDYPEDE 1656
            G   +R    +LTP+ER  DEAI+ AF+     + L +VL        A VN+ R   D TT LMAAA+ G    V  LL+LGA   +VD SG +AA  A M GH      L     + +  +RA   + + L    G G  D+VYD Y F+ + +    GG        P   P     +  +  + SGGE         G  D  AV +      TA+  VEL+FE+DSDWS+L    D  D DSN+E +Y NDYPEDE
Sbjct:  871 GQVLERRPMRVLTPMERLTDEAIWHAFRDGGGAARLLEVL----QQGGAGVNFTRTHADGTTPLMAAAYCGDGAVVTRLLALGAGPCVVDYSGNTAAKLASMNGHAAVARRL--LLAQAQWCERARGGEDADL----GEGDVDYVYDFYCFDGTKAAFGAGGVGEKGVIWPANLPV--VHIAGQFSEGSGGEG-----GKRGGEDRGAVASDIYSFATAEGPVELQFEYDSDWSDLKEASD--DEDSNAEDFYRNDYPEDE 1112          
BLAST of mRNA_P-littoralis_Contig10.139.3 vs. uniprot
Match: F0W0W7_9STRA (Angioassociated migratory cell protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0W7_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.370e-7
Identity = 80/255 (31.37%), Postives = 114/255 (44.71%), Query Frame = 1
Query:  913 KRTAAPILTPVERQMDEAIFTAFQTADMSNLRDVLTTSSSPS--PAIVNYRRRLGDATTALMAAAFHGHLDTVRHLLSL-GAKASLVDASGKSAALFAGMGGH---RECFAELQRTADEEEGEQRALSKKHSSLKGGGGSGGRDFVYDLYYFEPSASTSPTGGAPALERDGPYATPTGRSKVGEKTPDTSGGEPPVVRLCGIGPVDENAVGTTADVELE-FEHDSDWSELGNGDDGEDPDSNSEGYYGNDYPEDE 1656
            K  A  +L P++R++DEAI+ AFQ  D S    +L    +    P ++N+ R L D +T LMAAAFHG +D +  LL + G K  L D  G +A+ FA    H   +E     + T  E                       + FVYDLY  E   +TS T    +L  DG        ++  ++             + G+     N      D E+E F  DSD S +   +DGE  +SN E YY NDYP++E
Sbjct:  648 KLGAIRVLNPMQREVDEAIWKAFQQNDFSAFFQILHCEKAEQSMPKVLNFARPL-DGSTVLMAAAFHGRVDVIESLLQVTGIKVLLRDLEGSAASDFAARNKHLSVQEALIACETTERE-----------------------KAFVYDLYCVESVPTTSTT---ESLANDGLDIPVVHVNETVQQW-----------LVDGL-----NNFQKAEDGEIEDFVFDSDNS-IDQDEDGESLNSNDEDYYLNDYPDEE 858          
BLAST of mRNA_P-littoralis_Contig10.139.3 vs. uniprot
Match: K8YQM2_NANGC (Yth domain containing 2 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YQM2_NANGC)

HSP 1 Score: 54.7 bits (130), Expect = 2.770e-5
Identity = 42/97 (43.30%), Postives = 54/97 (55.67%), Query Frame = 1
Query:  943 VERQMDEAIFTAFQTADMSNLRDVLTTSSSPSPAIVNYRRRLGDATTALMAAAFHGHLDTVRHLLSLGAKASLVDASGKSAALFAGMGGHRECFAEL 1233
            +  +MD AI+ AF+  D+    D +      +   VN+ R      TALMAAAFHG L TV+ LLSLGA   L  A G +A+ FA    H+EC AEL
Sbjct:   10 LSERMDRAIWDAFK--DVKKGFDPILALVQHAGVSVNFSRP-AKGETALMAAAFHGKLATVKELLSLGADPCLKTADGHTASTFANKYNHKEC-AEL 102          
BLAST of mRNA_P-littoralis_Contig10.139.3 vs. uniprot
Match: A0A024G006_9STRA (Iwr1 domain-containing protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024G006_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 7.250e-5
Identity = 51/158 (32.28%), Postives = 76/158 (48.10%), Query Frame = 1
Query:  913 KRTAAPILTPVERQMDEAIFTAFQTADMSNLRDVLTTSSSPSPA--IVNYRRRLGDATTALMAAAFHGHLDTVRHLLSL-GAKASLVDASGKSAALFAGMGGHRECFAELQRTADEEEGEQRALSKKHSSLKGGGGSGGRDFVYDLYYFEPSASTSPT 1377
            K  A  +L P +R++DEAI+ AFQ+ D S     L  ++S      ++N++R L D +TALMAAAFHG +D +  LL + G K    D  G +A+ FA    H                 Q AL    ++ +       + +VYDLY  +    T+ T
Sbjct:  624 KLGAIRVLNPAQREVDEAIWKAFQSNDFSAFFHFLHRANSEISMLKVLNFQRPL-DGSTALMAAAFHGRVDVIESLLGVTGIKVLQRDYEGSTASNFAARNKHTNI--------------QEALIACETTERE------KSYVYDLYCIDSVPKTTTT 760          
BLAST of mRNA_P-littoralis_Contig10.139.3 vs. uniprot
Match: A0A7S3Y7Y8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y7Y8_HETAK)

HSP 1 Score: 56.2 bits (134), Expect = 8.120e-5
Identity = 37/77 (48.05%), Postives = 49/77 (63.64%), Query Frame = 1
Query:  958 DEAIFTAFQTADMSNLRDVLTTSSSPSPAIVNYRRRLGDATTALMAAAFHGHLDTVRHLLSLGAKASLVDASGKSAA 1188
            DEAIF AF+    + + D+L        + VN++R + D TTALMAAA+HGH   VR LL+ GA  SL DA+G+ AA
Sbjct:  187 DEAIFHAFRRGGTA-IEDLLGILQRAGVS-VNFQRPVSDDTTALMAAAYHGHAGAVRALLAAGADPSLRDAAGRDAA 261          
BLAST of mRNA_P-littoralis_Contig10.139.3 vs. uniprot
Match: A0A484EGW7_BRELC (Probable RNA polymerase II nuclear localization protein SLC7A6OS n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EGW7_BRELC)

HSP 1 Score: 57.4 bits (137), Expect = 8.570e-5
Identity = 48/146 (32.88%), Postives = 67/146 (45.89%), Query Frame = 1
Query:  931 ILTPVERQMDEAIFTAFQTADMSNLRDVLTTSSSPSPAIVNYRRRLGDATTALMAAAFHGHLDTVRHLLSLGAKASLV-DASGKSAALFAGMGGHRECFAELQRTADEEEGEQRALSKKHSSLKGGGGSGGRDFVYDLYYFEPSAS 1365
            +L P ER++DEAI+TAF+  D +    +  T            +R  D +  LMAAA HG  D +  LL  G  + L  D  G +AA+FA  GGH          AD E+        +H           +D+VYD+Y  + SAS
Sbjct:  218 VLNPYERELDEAIWTAFRANDFAPFFRIYYTRRQDGLVDPVAFQRTADGSNILMAAALHGRSDVIEVLLRSGTTSVLQQDFVGVTAAIFARRGGH----------ADVEKALLACEQAEHE----------KDYVYDVYCVDMSAS 343          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig10.139.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KUZ7_9PHAE4.620e-15250.14Iwr1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FQE4_ECTSI5.150e-12058.46Heat shock protein, mitochondrial protein import, ... [more]
A0A835YSD4_9STRA1.330e-1536.78Alkaline-phosphatase-like protein n=1 Tax=Tribonem... [more]
F0W0W7_9STRA1.370e-731.37Angioassociated migratory cell protein putative n=... [more]
K8YQM2_NANGC2.770e-543.30Yth domain containing 2 n=1 Tax=Nannochloropsis ga... [more]
A0A024G006_9STRA7.250e-532.28Iwr1 domain-containing protein n=2 Tax=Albugo cand... [more]
A0A7S3Y7Y8_HETAK8.120e-548.05Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A484EGW7_BRELC8.570e-532.88Probable RNA polymerase II nuclear localization pr... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig10contigP-littoralis_Contig10:547637..557392 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FQE4
Model size2556
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue2.19e-123
EggNOG OGs28PNG@1|root,2QWAI@2759|Eukaryota
Ec32 ortholog descriptionZinc finger, DNL-type
Ec32 orthologEc-01_006420.1
Descriptionankyrin repeats
Cds size1914
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig10.139.3prot_P-littoralis_Contig10.139.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig10 548222..557335 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789332.8276525-UTR-P-littoralis_Contig10:547636..5482211680789332.8276525-UTR-P-littoralis_Contig10:547636..548221Pylaiella littoralis U1_48UTRP-littoralis_Contig10 547637..548221 -
1680789332.8918219-UTR-P-littoralis_Contig10:557335..5573921680789332.8918219-UTR-P-littoralis_Contig10:557335..557392Pylaiella littoralis U1_48UTRP-littoralis_Contig10 557336..557392 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789332.8425853-CDS-P-littoralis_Contig10:548221..5485421680789332.8425853-CDS-P-littoralis_Contig10:548221..548542Pylaiella littoralis U1_48CDSP-littoralis_Contig10 548222..548542 -
1680789332.8530297-CDS-P-littoralis_Contig10:548876..5490771680789332.8530297-CDS-P-littoralis_Contig10:548876..549077Pylaiella littoralis U1_48CDSP-littoralis_Contig10 548877..549077 -
1680789332.8654258-CDS-P-littoralis_Contig10:555564..5560381680789332.8654258-CDS-P-littoralis_Contig10:555564..556038Pylaiella littoralis U1_48CDSP-littoralis_Contig10 555565..556038 -
1680789332.8795855-CDS-P-littoralis_Contig10:556417..5573351680789332.8795855-CDS-P-littoralis_Contig10:556417..557335Pylaiella littoralis U1_48CDSP-littoralis_Contig10 556418..557335 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig10.139.3

>prot_P-littoralis_Contig10.139.3 ID=prot_P-littoralis_Contig10.139.3|Name=mRNA_P-littoralis_Contig10.139.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=638bp
MSHAPFRRKSRQAVEAAISHAASRKPAPHLVVLRVKRKRGDAAVESLLVA
PEERGYSEKEADMPDRKRRAAHGAGSVEETLANLSLDAAADQHDKHQQQR
NMRQPPKNRLCYKRVRTTEPDGSSNDDRSKEQHPSTPSVVAPPPNQAALG
GDTSAPTVGGGDTWSGDGGRLDSLLSSRANSAFVSPPPRPAAVVDFMEVR
RVRARAVTNARANSTNGGSPSARGGCEQQQPMKPSTGVASAVGSGNAAAD
FHVIDLQAVSLRDNADMDVSSGVDKGEAFKGGAPAKRTAAPILTPVERQM
DEAIFTAFQTADMSNLRDVLTTSSSPSPAIVNYRRRLGDATTALMAAAFH
GHLDTVRHLLSLGAKASLVDASGKSAALFAGMGGHRECFAELQRTADEEE
GEQRALSKKHSSLKGGGGSGGRDFVYDLYYFEPSASTSPTGGAPALERDG
PYATPTGRSKVGEKTPDTSGGEPPVVRLCGIGPVDENAVGTTADVELEFE
HDSDWSELGNGDDGEDPDSNSEGYYGNDYPEDEGDEDDAAGSGPAPYVYD
GGAGSSCESEGGNSSSSGGGGFDSDSDNEPYCRRVVETPTDEDGISGDMG
VSRSVESMPQALGDTALESTFHEGLGNANVFAWAPKR*
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mRNA from alignment at P-littoralis_Contig10:547637..557392-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig10.139.3 ID=mRNA_P-littoralis_Contig10.139.3|Name=mRNA_P-littoralis_Contig10.139.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=9756bp|location=Sequence derived from alignment at P-littoralis_Contig10:547637..557392- (Pylaiella littoralis U1_48)
GGTCGGCGTAGACAGAAGAGACGCAACAGTAGTAGTGAATCCCTGCAGTA AATCGCCATGTCTCATGCCCCTTTTAGACGAAAGTCGCGGCAGGCTGTGG AGGCGGCGATTTCACACGCGGCTTCCCGAAAGCCAGCGCCGCACCTCGTG GTTCTGAGGGTCAAGCGAAAGCGCGGAGATGCGGCGGTGGAGAGCCTGCT CGTGGCCCCCGAAGAACGAGGATACAGCGAGAAAGAAGCAGACATGCCGG ACCGCAAGCGTCGTGCAGCCCACGGAGCCGGTTCCGTTGAGGAGACTTTG GCCAACCTAAGCCTTGACGCGGCTGCGGATCAACACGACAAACATCAGCA GCAGCGGAACATGAGGCAACCTCCAAAAAATAGACTTTGTTATAAACGTG TGCGAACGACCGAGCCAGATGGCAGCAGCAACGATGATAGAAGCAAAGAG CAACATCCCTCGACCCCTTCCGTTGTTGCCCCCCCTCCAAATCAGGCCGC TTTGGGCGGCGACACATCTGCTCCAACCGTTGGAGGTGGGGATACGTGGA GCGGAGATGGAGGGCGACTGGACTCACTTCTTAGTAGCAGAGCAAACTCT GCTTTTGTATCGCCGCCACCGCGGCCAGCCGCCGTAGTGGACTTTATGGA GGTACGACGGGTGAGAGCAAGGGCTGTCACCAACGCTCGCGCCAACAGCA CGAACGGCGGGAGCCCATCCGCACGCGGCGGGTGCGAGCAGCAACAACCC ATGAAGCCATCGACTGGGGTGGCATCAGCAGTGGGTTCGGGTAACGCTGC CGCCGACTTCCATGTTATCGACCTTCAAGCTGTCAGCCTGAGAGATAACG CCGACATGGATGTCTCGTCGGGTGTCGACAAGGGAGAAGCATTCAAAGGT GGGGCTCCCGCGAAGCGCACGGCCGCCCCTATCCTCACCCCTGTGGAACG GCAGATGGACGAGGCTATCTTCACGGTGAGGGGCTCTTTCTGTGGGTGTC TACGCAAATACCACTCGCATGTTGGTGATGGCTGCTGGCGATTTGTAGAA ATCACGGAAGCGCGTAGTGCGCGCGGCTTTCATGCACGTTTCCGGGCGGC TTTACCATGTCTTATGGACAAGGATAATTTTCATCTTCCCAGTCCAAGTG CGTGGGCTGTACTCGGGTTAATGTAGAACCCTGCTATGGCGTCTCCCACC GCTTGCAATGAGTGCCAACGGTGTTCATGTAGAGGCCCAACACAGCAGCT CTCCACACCACAGCCAGTACCCCGTTCACCGTTCCCTCTCTCGTTTTTTC TTCAAACGTACCTGTGTCATACACACGCATGCATTTGCGCCAACCCGAAC ACAGGCGTTTCAAACAGCGGATATGTCGAACCTCCGCGACGTCCTCACGA CCTCGTCTTCCCCGTCCCCGGCCATCGTCAACTACCGTCGCCGACTGGGC GACGCCACGACCGCTCTCATGGCTGCCGCCTTCCACGGCCACCTGGACAC TGTCCGGCACCTGCTGTCTCTCGGCGCCAAGGCGTCGCTTGTCGACGCCA GCGGTAAGAGCGCGGCGCTCTTTGCGGGTATGGGTGGCCACCGCGAATGC TTCGCGGAGCTCCAGCGTACCGCGGACGAGGAGGAGGGAGAGCAGAGGGC GCTTTCCAAGAAGCACAGCAGCTTAAAGGGTGGTGGTGGTAGCGGCGGCC GTGACTTCGTGTATGATCTTTACTACTTCGAGCCTTCCGCATCGACTTCG CCGACAGGAGGAGCGCCGGCGCTCGAGAGGGACGGGCCGTATGCTACGCC TACCGGCAGGAGCAAAGTCGGCGAAAAGGTAAAATATCCCAAGGGTGTGT TCTGTAGGGTACCCACAGAGACGTACCGGCGGTAGTTACCCTCTGTAAGT ATCCTACAGAGAATCTCTGTAGGATGTGTAACTTTCCAAATACCCTGCAG AAAACTTTTGTGACAGGTCAGCACAATACCCTCGAACTTCTGTGAGTTCT GTGGACACCTCAATACCCTACAGAGAATCTCTGTGAGTTCTGTGGACACC TCCATACCCTACAGAAAATCTCTGTGAGTTCTGTGACACGTCCATACCCT ACAGAGAACTTCTTTGAGTTCTGTGACGCGTCCGTACCCTACAGAGAACT TCTGTGAGTTCTGTAACAAATCCAATATCCTACAGAGACTTAAGTACAGT AGAGGTCCCGGTATAGTGCAGGGGTGTGTCCAGAGTTTTTACCTGCACTA TACCGGGCACCTGCACTACTGACAAGAGTGCCTCAATAGGGCAGGTCCTG CACTATTGAGGCTTTGTAAATCCCTCAATAGTGCAGGTTAGGCACTACTG AGGCACTCTTTGACTTCAGGGTGTGGCGTTCTCGCTTTGCGGGGCTAACA GAGCATAAAACCGATCGAAATTGTTTACAGCAGTACTAATACCTAGTGGA CGAAGCTAAATCTTATTCCTCGTTGCCATTCTCCTTCTTCGTTGCCTTCC TTCGATGTTGCAAGATACATAGAAACAGAAACAGAAACACGACAGGAAGC GCATTGCAAAAAAATAAACAACCATGTACTATGTACTACTGCTGTACCCC CATCACAACGTGGTGACCAAACTCTCTCATGCCTGCCTGGCGCACCCGCT TTGGTGTGTGTGTGTGTGTGTGTGTTGTCATCCCTTTAATTGGACGCCAC TCTACACCTTTCGGGTGGGTCGACGCTCCAACTGGGGTCACACAGGGGGA AGTCTACACAGGAGTTTTTTTTTTTTTTTCTCGACTTCCCTCTGCGGTGC TTGCCTTGTTTTTGGTTGAGCTTTTATCGCGAGAAAGGGGACAGCAATCC CTTTTCCCTCGTCGATGGTACGATCGAATTTTGTTTACTCACGAATTAAT CGCTCTCCACTTCCACGCGCATTGTAAGAAGAAAACCCAGATCGTGTTAC TGCACTTGGATTCGAACTCACGCGTGAATGTCAGAAGGTTACGTGGATTG CCAACTGAACCACCGGGGCGACCGGTCTGCAAAAAAAAAAAAACACAAAA CAAACCACGACAAACACGACAGGAAGCGCACCGCAAGAAAAACAAGACAA CTATGTACCCCCGCCCTCCCTACGTCTCGACAAACTCTCTCATGTCTGCC TGGCGCGTAGAGCTCTTTCGGGTCTGCAGCAGCACGTGTACCCTCCGTTT TTGCTGTGTTGGGTTCGTTCGTGTGTTGTGTGTGTGTGTGTGTGTGTGTG TGTGTTTGTGTGTGTGTCCAACCTGCACTATTGCGGGGCACCGCGGTGCC AAACCTGCACTATAGCGGGAGTGCCCTCAATAGTGCAGGTCCTGCACTAT TGAGGGCACTGTCTGTGTCCAGAGATTTTACCTGCACTATACCGGGCACC TGCACTATTCAACCTGCACTATACCGGGACGTCTACTGTATGCACTCTGG AACAATACCCGAGGTACGGGTAAACATCTGTGGAAGACCCCACCAGGTTG TGACTGACGTCAGGCCCACGAACGAAACTACACAGTGCTTTAAAGGTACT TGGAAGGTGAAGGTACTGCTGAAGGAATATAAAGACGGTCGCCCCAGCCG CAAACACCACATCTGTTCACAACAGGCTCTGTGCTTCTGTGCGAAAGCTA GAAAGGAGAAGCGTAGATCTAAATCTCCGTATGTGCTGCTTGGGCTCCCA GCAGGACCAGTCTCGGCCTGTTGCTGGTTGCTTGTGATACTCTGCCGGCG CAGTGCTTGCTGCTCTGGTGCTGTGTTTCTGGTTCTGTGCGTGATGTGTG ATGCCCTGGTGGTGCTGCTGCTGCTGATGATATGTGCTGTGGTGCTGCGT CGAGCACAGCGCTAAAGGGGGCACCGTCAGTGCGATATGTATTCATGCGG GTAGGTATATATAAAAGGGAGTACCGGGGGTCATCGGGGATCATTCCCAT CTATGACACATCAATACCCTGCAGAGAATCTCTGCGAGTTCTGTGGACAC CTCGATCCCCTACAGAGAACTTCGTACCTCTGTGCGCTTTGAATACCCTA TAGAAAGTTCTGTGACAGTCTCCACAATACCCCCAAACGTCTGGAAGTTC TGTGGACACCTAGATACCCTACAGAGAAATTCTGTATCTCTGTGCACTTT GAATACCCTACAGAAGGTTCTGTGGACACCCCAATACCCTACAGAGAATC TCTGTGAGTTCTGTGGACACTTCAATATCCTACAGAGAATCTCTGTAGGA TCTGTCACTTTCCAAATACCCTACAGAAAACTTCTGTGACAGGTCAGCAC AATACCCTCGAACTTCTGTGAGTTCTGTGGACACCTCAATACCCTACAGA GAACCTCTGTGACTTCTGAAACAATTCAAATACCCTACAGCCATGCCGTT ACCCTACAGAACACACCCTTGAAATATTCTCTAGTTTCAGGCAAACGAAT GCTTGCCCCTCCATCCCATAGTATGCGCAGTGGATGGAGTATTTTTACGT CAGTTTTTGACTCTTGCCGTAGAAAGTAAAGATATGCCGTACTTTCATTG ACAATAGAGTTTGCGAAATAGAATATCTTATCTCAAATTTCCTTTCTTGG AAATACAAAAAAATAAGCGCGGTGAATCAGAATTCCTTTTAACGAAAATT TGAAAATGAGTTTGCGGAAAAGGATTTCCTTTCTAACATAAACACCTACC TGGTACACTTTGCTGTGAGAGTGCAGAGCAACACAAACACAAACACACAC ACACACGGCTGATAATGTGCTGCTGCTGTAGAGACAACACAATGAGTCTT TCGTTCAAGTGGTGGTGAAGGGTGCCGGGTCAAGCGAAGTAAATGCAAAG TCAGCGGTCATAGGCAGCAGGGATGGGGCAAGTTCGGCAGAAAGGACGTA TTGCGGAAGGCATCACTGCTGCGTGTCAACTGCTGCTGTTCTACAGTATT TTGGCCCGTCTATTTTCATGTGCAAAAAAAGGTCGTTTGCATTTCCAGCG TGGCCGGCCAGACCCCGAGCGATGCTTCTGCTTCTCTCCATCTATTGAAT GAGCCCACCTCCAACCCAACCTCCTGCGGGCGGAGAGCACTATATAAAGG AGACAGCCAAGAAGTGTTCACCTTGATACGTGGTGTAGAAAGCGAGAGCG TGGCTGCTGTCATGTTCTGATGTCTGTCGCGTTCAACTGCTGATGTGTGC CTCTGGGGACGCACGCCAGCCCACACTTGCTACTTTCAAAGAGTCGCCGC TCAGACGATATGTTTTGCGTGGCTGGCACACTTCCACCACATAAACCAGC GGCAAAGGTGTCGGCACAGTGACTACAGGGTTGCACGGAACCCTCTTTGA GCTCGCCACCTTTAGAAATCACGGCGCAGTAGTCGGTACTGTCGACTGAA ACGTAGTGGTGTATCGCAATCTTCTCGCACATCACACCGTCCGGGTGATG CCGGGGTGATTTGGCCAATCACACGATGTGCCGACACGGGCTCGCTTGGC AGATCAAATATTCTTTTCAAAAATCCTCTGTTGCCGGGAATTTCCGGAAT TTGAGAAAATAAATTCTTTTTGGTGCAGTCACGGAGCCTCTCCGGGGAAC CTCGGAGAAACCAAGAAAGGAAATTTGAGATAAGATACTTCCTCTGTATC ATAAGTCTGTGCGGTTATGTTTTTACGCCCCCTCGACGGTGTCCGATGTC TTCGGCGATAATTTTTTCGAAATCTTCGGAGTTTTTTGGGTTGAAACACG TATACCTGGTATATTTTTTTCTTGCGCACTACCCTGCGCATGGGCTAGCG GCTAACAAAAAAGTGTTCAGGCCAAAAATGGCCGTATTTAACCCTTTCCA GAGGTGGAGTGGGGGGCGGGGGCAAAAAAAAAAACCAATGCAATCCCCCC CAAAATTATCCCTAACCCTGAACCTAGCCCCCCTACCTCAAAGATTCATG TTGAGTCCCTCCTTACTAAAATCAGTATAATAGTGACGCGACGCTAAAAC CAAGACACTTGGGTTTGCCACACTTCATTTTAGTTGTTGTTGTTGTTGTT GTTGATTCTCACATTAGCTCACTACCGCCGCAGTCTAGCCCGTGGTCACA AACCAGGCACATATCGTGCTAGGAGGAAAAAAAAATATATATATATATAT ATGGACTATGATCACCCACAGTCAGATCAGACGTGGTACCGTTGGGGTAC CATCTGTGGTGGCCAGGATACCAAACAAATACAGAAAAAATAATAACAGG CTCGAAAGAAAAACAAAAATTGGAAACAGTCCGGCAAACAAAAAATAACC AAGACAAACCTCAACCATAACCATATACTTCGAAGTACTTCGTGCATCGA ACCAGGGCCCAGGGACAGACGAAGGCAGACGCAAACCAGGGCGATGGCCC AGTAACTATATGATCAACAGACGAAAGACAAAAAATAAAATAAAAAGAAG AAGATACAGGGAGGGCACAAAGACTGAGGGAGTGCATTCGTAGACAAACA TAACAAACAGGCCGCCGCCAAACAAAGAGGAAGCAGGGGAACGAAAAGGG AAAAGAAGATCGGAAGTACCGGAAGTCGGGGGGGGGGGGGAGGTGATGAA AATAAATGAAAGGCATGCAATCAATCGCAAACGTGTCTCGCCACGAGGTC TGCCTGTTCACGCTTGCTCTCCTCAGTCGCACTCATGCCTCCTGCTACTG GCACCACCGTACCCAGTTGTTTCTGCCCCACATCTTTGGCAGCAGCTACA CCACCACTCCGCCCTACAGGTTTTCCACTCCGGCCACCCCGTAGCTTGGC ATTGGACTGCTTCTTCTTGTTCTGTGCAACTCCAACCCCACTACCCCGCT GCCCTTGTGCCCCCCCGTACTCCTCCTCTCGTTTACCCCCGTCATCCGTT CTCCCTCTTTTAGTCAAGGCCTGCCTCTCAGCCGCGTCCCTCTCTCTTTT CCGTCGACATGTCTCTGATAGGTCTCCCTCTTTCTTGAGCCACTCGTCCG TGAACCGCCGCGCACCCTCGTCGATCCTGTCGTACCACTCGTCAGCTCTC TTGGCACTTGCCTCCCACCCCTCCTTTTTGTCGACCACGATGTCGAACGC TTCGAGGTCCTCCCGCATTCGCCTCAGCCAGTCAAACTCTTGCCCCCCCA GATACCTCGCTCCCCCCTGCAATTCTCCCAAAAGAGCAATTCTCGGGAGT CTCTCGTCTCTCATGCGCGCAACGAATCCTGCGAAGCACAGTCGCCGCTT GCGCAGTGTGGCCTCAACGCTCTCGTTGCAACCCGCGGTGATCAGGGCTT TGGCGTAGGAGAGGGGTCGGTCTGTTCTCTCCCTCTTTTTCCATCCGATG CAGCGAAGGAGGAAGAAGTGGTGGGCTGACCGAAGCTTGCGGTACTCCGC TGGCTTCAGATTCCATGTGACACACCCGTAGAGTAGGGTCTCCACGACTT CAGCTTGGAGGAGTCGTACTTTTAGTCGAAGAGGGGCCCCCGGGCGGTCG TACATTGCCTGGCTGTTGCGCCGGAAGCAGGCGTGCGCTCGCTGCACTCG GTGGTTAATCTCGCCCTCAATGCTGCCGTCCTCACAAATCTTACCCCCGA GGTAGACAAATTATTTCTTCTGCTTGAAGACCATCCCGGCAGCGTCGATC GTGAACGAGCACGCCTCCATCCCTTTCGCGAGCATACACATGGTCTCCGT CTTGGGTTCTGACACCAACAGCCCAAACCGCCCGGCCACACGTACGATGA TCGACATCATCTTCTCAAGGCTCCCAGGTGATTGAGATACAATACAGGCG TCGTCGGCGTAGAGCATACTCCAGATGGACTTCACTGCCCCCACCGGTCG GGCGTTCCTCTCCTTCCCCTTCGTCACCTTCCTCTTGACCTTGGCCATGT CCGCCATCACCTCCGCGTCCTTGATGATCTCGGCAAAGGCCACCATGAGC ATCGCAGCAAAGAAAAGGTTGAACAGCAGGGGTGCCAGATTGCATCCCTG TCGGAGTCCTTAGTATAAACAACTGGCTTTTTTTTTTCTTTTTCTTTTTG CATCAGCTTCTCTGAGACTTCATCTTTCGAACGAACCCAACTATAGGATG ATCGAAACAGTATAAATGCGCAAACAATTACACGCCCATAACAGCCCAGA CTTATGATACAGAGGAAATATTATCTTTCGCAAACTCTAATGGGCCAAGT TTATACCTCGTCAGCAGTGTTGACCGTAAGATAGATTCATATTGCTCTCG AGCTATAAACTCGCCATCAACTGTTAATGTGTGTTTATGTGGGTCGCGCG TGTGCGCGGCTGCAGACGCCTGACACATCCGGCGGTGAACCTCCGGTGGT GCGCCTCTGCGGCATTGGCCCCGTTGATGAAAACGCCGTCGGGACGACGG CAGACGTTGAGCTGGAGTTCGAGCATGACTCCGACTGGAGCGAGCTCGGC AATGGCGACGATGGGGAGGATCCCGACTCAAACTCGGAGGGTTACTACGG CAACGACTACCCAGAGGTGGGGGACATTGGAGATATAGGTACACTTGCCG ATGAGGGGGTTGAAGGGTTGGCATATTTTACGTGGAAACGTGCCTGTAAC AACTTGCGTGTGTTTCTGCTGGCGCCCTTTCCGCCTGTTTTTGATGTGGA TGACCGAACCCATGCGAAACATGTAGGTGTCGATCCAGCTGCCTGATTAA CAGATTACACGAACTATCGCGCAGCTTTGTTGCCAGCCACTACTGGCGCG AAATTTCAGCCCGCCAAAGTTGTATCGAAAGAATGGCCACCCTTACTCTC CTTGTTCGGCGTGACATTTCTCCTCTTCCTCTCGCACCCAACGCATGCAG GATGAGGGTGATGAGGACGATGCTGCGGGTTCGGGCCCCGCTCCGTACGT CTACGACGGCGGAGCCGGGTCCTCTTGTGAATCGGAGGGCGGAAACAGCA GCAGCAGTGGTGGCGGCGGCTTCGACAGCGACAGCGACAACGAGCCATAT TGCCGTAGGGTTGTAGAAACGCCTACTGACGAAGACGGCATTTCCGGTGA CATGGGTGTATCTAGGTCGGTGGAAAGTATGCCGCAGGCACTGGGAGACA CAGCACTGGAGAGCACATTCCACGAAGGGTTGGGGAATGCCAACGTGTTT GCGTGGGCCCCGAAACGATAGGATGCCGAATGGTAGATTCGCGTGGTGCA TATCATAAGGACACGGGTCAACCGCCGTGGGCGCGATTTTGTTCTACGGG GCGCGAATTGATGTCGGCCGTTATCTGCTGACGTGACTGCTGTATTTATA CTGGTACCAAGTAGGGTTGGAATGTCAGCCTGATACCGGCTGCTGTACAT TTTCGAATCTGGCAAACCGCCAAATCCGATCAGAGTTATGGTTAAGGACC TGCGGCACACAGCTGTGATTGGGCGCTGCGTGCCATAGGTGTGTGTGTGT GTGATTCGTGTTTTTGGCGTCGTCACCTCATGTGGCAGAGCCTATTTCAT TTGCTGTCGTCTTGCCACTCGAGATCACGAGCGATTTGTGGAGTTTGCAG TTCTCCGTCCAATGTAGCCATCCCGGGATATGTTCACAATCAACACGCGT TGATCGTGGCATCGTATCATACTCGTAAGGCTACATCTCATGTTTCAAAA ACGTCATTATTCCTTTTGGGCCGTTCGAATAATAACGTTTCCAACAGGCT CTGTTGAAGGACCCGATATTACAGCATGTGTCAAAACCGAACAGCAGGTG GTTTTA
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Coding sequence (CDS) from alignment at P-littoralis_Contig10:547637..557392-

>mRNA_P-littoralis_Contig10.139.3 ID=mRNA_P-littoralis_Contig10.139.3|Name=mRNA_P-littoralis_Contig10.139.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1914bp|location=Sequence derived from alignment at P-littoralis_Contig10:547637..557392- (Pylaiella littoralis U1_48)
ATGTCTCATGCCCCTTTTAGACGAAAGTCGCGGCAGGCTGTGGAGGCGGC
GATTTCACACGCGGCTTCCCGAAAGCCAGCGCCGCACCTCGTGGTTCTGA
GGGTCAAGCGAAAGCGCGGAGATGCGGCGGTGGAGAGCCTGCTCGTGGCC
CCCGAAGAACGAGGATACAGCGAGAAAGAAGCAGACATGCCGGACCGCAA
GCGTCGTGCAGCCCACGGAGCCGGTTCCGTTGAGGAGACTTTGGCCAACC
TAAGCCTTGACGCGGCTGCGGATCAACACGACAAACATCAGCAGCAGCGG
AACATGAGGCAACCTCCAAAAAATAGACTTTGTTATAAACGTGTGCGAAC
GACCGAGCCAGATGGCAGCAGCAACGATGATAGAAGCAAAGAGCAACATC
CCTCGACCCCTTCCGTTGTTGCCCCCCCTCCAAATCAGGCCGCTTTGGGC
GGCGACACATCTGCTCCAACCGTTGGAGGTGGGGATACGTGGAGCGGAGA
TGGAGGGCGACTGGACTCACTTCTTAGTAGCAGAGCAAACTCTGCTTTTG
TATCGCCGCCACCGCGGCCAGCCGCCGTAGTGGACTTTATGGAGGTACGA
CGGGTGAGAGCAAGGGCTGTCACCAACGCTCGCGCCAACAGCACGAACGG
CGGGAGCCCATCCGCACGCGGCGGGTGCGAGCAGCAACAACCCATGAAGC
CATCGACTGGGGTGGCATCAGCAGTGGGTTCGGGTAACGCTGCCGCCGAC
TTCCATGTTATCGACCTTCAAGCTGTCAGCCTGAGAGATAACGCCGACAT
GGATGTCTCGTCGGGTGTCGACAAGGGAGAAGCATTCAAAGGTGGGGCTC
CCGCGAAGCGCACGGCCGCCCCTATCCTCACCCCTGTGGAACGGCAGATG
GACGAGGCTATCTTCACGGCGTTTCAAACAGCGGATATGTCGAACCTCCG
CGACGTCCTCACGACCTCGTCTTCCCCGTCCCCGGCCATCGTCAACTACC
GTCGCCGACTGGGCGACGCCACGACCGCTCTCATGGCTGCCGCCTTCCAC
GGCCACCTGGACACTGTCCGGCACCTGCTGTCTCTCGGCGCCAAGGCGTC
GCTTGTCGACGCCAGCGGTAAGAGCGCGGCGCTCTTTGCGGGTATGGGTG
GCCACCGCGAATGCTTCGCGGAGCTCCAGCGTACCGCGGACGAGGAGGAG
GGAGAGCAGAGGGCGCTTTCCAAGAAGCACAGCAGCTTAAAGGGTGGTGG
TGGTAGCGGCGGCCGTGACTTCGTGTATGATCTTTACTACTTCGAGCCTT
CCGCATCGACTTCGCCGACAGGAGGAGCGCCGGCGCTCGAGAGGGACGGG
CCGTATGCTACGCCTACCGGCAGGAGCAAAGTCGGCGAAAAGACGCCTGA
CACATCCGGCGGTGAACCTCCGGTGGTGCGCCTCTGCGGCATTGGCCCCG
TTGATGAAAACGCCGTCGGGACGACGGCAGACGTTGAGCTGGAGTTCGAG
CATGACTCCGACTGGAGCGAGCTCGGCAATGGCGACGATGGGGAGGATCC
CGACTCAAACTCGGAGGGTTACTACGGCAACGACTACCCAGAGGATGAGG
GTGATGAGGACGATGCTGCGGGTTCGGGCCCCGCTCCGTACGTCTACGAC
GGCGGAGCCGGGTCCTCTTGTGAATCGGAGGGCGGAAACAGCAGCAGCAG
TGGTGGCGGCGGCTTCGACAGCGACAGCGACAACGAGCCATATTGCCGTA
GGGTTGTAGAAACGCCTACTGACGAAGACGGCATTTCCGGTGACATGGGT
GTATCTAGGTCGGTGGAAAGTATGCCGCAGGCACTGGGAGACACAGCACT
GGAGAGCACATTCCACGAAGGGTTGGGGAATGCCAACGTGTTTGCGTGGG
CCCCGAAACGATAG
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