mRNA_P-littoralis_Contig889.26.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig889.26.2
Unique NamemRNA_P-littoralis_Contig889.26.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig889.26.2 vs. uniprot
Match: A0A6H5JMU8_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMU8_9PHAE)

HSP 1 Score: 450 bits (1157), Expect = 2.200e-148
Identity = 227/310 (73.23%), Postives = 251/310 (80.97%), Query Frame = 1
Query:  358 DFPCSPSKTSGFHDNMSLEMLTNVLPLDKGGFCVACSCTYMG-QRAVLKVPKRQGPKSAIADLLVEIGIYKRISERGGHPNIAHAFGSGFYLLEEKPTPFLVLELLEGGSLAEAIERSRR-ESDADSAEGWSDPMSRLPVALELADALQFLHRDAIPCGFILHRDIKPTNIGLSAEGHVKVFDLGLSVVQEVRGGSQDQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWELCTLRKPFAGMNVADHYREVVIGRLRPPLHPQWPAGLQNLMQACWHEDPDHRPSILEAREILLQICLVEGGW 1281
            D     S T+ F DN+SL+ LT++ PLD GGFC+ CSCTY G QRAVLK+PK QGP SA ADLL EI IYKRIS RGGHPNIA A G+GF     +  PFLVLE LEGGSLA AIE SR    DA     W D ++RLPVALELADALQ+LHRDA+P GFILHRD+KPTNIGL AEGHVKVFD GLSVVQEVR G+ +QKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWE+CTLRKPFAGM+VADHYREV+ G LRPPL P+WP  LQ+L+QACWHEDPD RPSI EAR++L QI L  GGW
Sbjct:   36 DITAFDSSTAVFQDNLSLDALTDIQPLDHGGFCIVCSCTYNGVQRAVLKIPKPQGPNSAAADLLAEIAIYKRISARGGHPNIAAALGAGF---TSRGEPFLVLERLEGGSLAGAIESSRTLGGDAADGGAWVDLVTRLPVALELADALQYLHRDALP-GFILHRDLKPTNIGLCAEGHVKVFDFGLSVVQEVRRGNLNQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWEICTLRKPFAGMSVADHYREVITGGLRPPLDPRWPGALQHLLQACWHEDPDRRPSISEARDVLQQIFLAGGGW 341          
BLAST of mRNA_P-littoralis_Contig889.26.2 vs. uniprot
Match: A0A6H5L2N4_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2N4_9PHAE)

HSP 1 Score: 349 bits (896), Expect = 4.090e-110
Identity = 177/302 (58.61%), Postives = 221/302 (73.18%), Query Frame = 1
Query:  391 FHDNMSLEMLTNVLPLDKGGFCVACSCTYMGQRAVLKVPKRQGPKS----AIADLLVEIGIYKRISERGGHPNIAHAFGSGFYLL--EEKPTPFLVLELLEGGSLAEAIERSRRESDADSAEGWSDPMSRLPVALELADALQFLHRDAIPCGFILHRDIKPTNIGLSAEGHVKVFDLGLSVVQEVRGGSQDQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWELCTLRKPFAGMNVADHYREVVIGRLRPPLHPQWPAGLQNLMQACWHEDPDHRPSILEAREILLQICLVEGG 1278
            F++N++L  L  V P  +GGFCV CSC Y GQ+AVLK+PK     S    A  DLL EI IY++IS RGGHPNIA AFG+G ++   E  P+PFL+LE L+GG+L  A ERS           WSDP+ RLPVA+ELA+A+ FLH  AIP G +LHRD+KP+NIGL   GH+KVFDLGLSVV++V   +  + Y+MSGMAGSKRFM+PEVC GL YNEKVDVYSFA+VLW++C LRKPFAGM+ ADHY +VV G LRPPL  +WP  L +L+QACWH  PD RP++++AR+ L QI  + GG
Sbjct:    7 FNENVTLAELNEVEPFSQGGFCVICSCIYRGQQAVLKIPKPATTSSRSGGAAQDLLREISIYRQISLRGGHPNIARAFGAGTHVQQGETSPSPFLLLERLQGGTLENAFERSTAV--------WSDPIGRLPVAIELAEAVAFLHEAAIPGGVVLHRDLKPSNIGLCGAGHIKVFDLGLSVVRQVLE-APTRVYEMSGMAGSKRFMAPEVCTGLSYNEKVDVYSFALVLWQICALRKPFAGMSEADHYLQVVQGGLRPPLDARWPPQLVHLLQACWHVHPDARPTMVQARDTLRQIFAMGGG 299          
BLAST of mRNA_P-littoralis_Contig889.26.2 vs. uniprot
Match: A0A6H5K4Q0_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4Q0_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 9.290e-61
Identity = 123/303 (40.59%), Postives = 184/303 (60.73%), Query Frame = 1
Query:  391 FHDNMSLEMLTNVLPLDKGGFCVACSCTYMGQRAVLKVPKR--QGPKSAIADLLVEIGIYKRISERGGHPNIAHAFGSGFYLLEEKPTPFLVLELLEGGSLAEA-----------IERSRRESDADSAEGWSDPMSRLPVALELADALQFLHRDAIPCGFILHRDIKPTNIGLSAEGHVKVFDLGLSVVQEVRGGSQDQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWELCTLRKPFAGMNVADHYREVVIGRLRPPLHPQWPAGLQNLMQACWHEDPDHRPSILEAREILLQI 1260
            F D + LE + N      GG+C   +C   G++  +K+P      P+ A+ADL  EI I KR+     HP++   +G+G +  E +  PFLVLE L+  +LA+            +E  +++  A           RL   L+L D L++LH ++IP GF++HRD+KP+NIG+S +G +KVFD GL+ ++E R    D +Y M+G  GS+RFM+PEV  G+PYNEK D+YS+ IVLWELC L+KPFAGM+  +H R+V    +RPPL  +WP  L++L+++CWH + + RP   +A E L +I
Sbjct:   78 FKDLVILEHIAN------GGYCTVLACMLHGEKRAVKIPLATCSDPEGAVADLTNEIRILKRLR----HPHLCSVYGAGGWRAEGE-LPFLVLERLQYKNLAQQCGTDVDDTSMIVEFKQKKLRAK-----FRFRKRLGYGLQLGDLLRYLHSESIPGGFVIHRDLKPSNIGISDDGVLKVFDFGLAKLREQRDPLTD-RYVMTGQTGSQRFMAPEVFDGMPYNEKADIYSYGIVLWELCALQKPFAGMSSHEHARKVFRHGVRPPLDKRWPDELKSLLRSCWHAEAEERPDAAQAVETLARI 363          
BLAST of mRNA_P-littoralis_Contig889.26.2 vs. uniprot
Match: A0A6H5LAW2_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAW2_9PHAE)

HSP 1 Score: 217 bits (552), Expect = 1.090e-58
Identity = 123/325 (37.85%), Postives = 173/325 (53.23%), Query Frame = 1
Query:  400 NMSLEMLTNVLPLDKGGFCVACSCTYMGQRAVLKVPKRQ--GPKSAIADLLVEIGIYKRISERGGHPNIAHAFGSGFY---------------------LLEEKPTPFLVLELLEGGSLAEAIERSRRESDADSA-------EGWSDPMSR-LPVALELADALQFLHRDAIPCGFILHRDIKPTNIGLSAEGHVKVFDLGLSVVQEVRGGSQDQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWELCTLRKPFAGMNVADHYREVVIGRLRPPLHPQWPAGLQNLMQACWHEDPDHRPSILEAREILLQICLVEGGW 1281
            N+  E L +V  L  GG C   +  + G+R V+K+P+     P+ A  DL  EI I +R+     HPNI    G+GF                          +   F++LE L GG+L E++      +D   +       + W  P  + +  AL+LA AL +LH  AI   F++HRD+KP NI  S +G +K+FD GL+ +   RGG   Q+Y+M+G  GS R+M PEV   LPYNEK DVYSF ++LWE+ +LR+PF G+N  +  + V+ G  RPPL  +W A L+ LM+ CW ED D RP   E  + LLQI   E  W
Sbjct:   39 NLDFEELRDVQYLTNGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLQ----HPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQANAESKRFVLLEYLVGGTLTESMLTRNPPADGMMSSVVRRWQQNWQFPTKKAIDSALQLASALSYLHGRAIEGSFVVHRDLKPENIAFSGDGRLKLFDFGLAKIVRRRGGRLSQRYEMTGETGSTRYMCPEVAMQLPYNEKADVYSFGLILWEMLSLRRPFEGLNRKEFVQSVIKGGRRPPLQQEWSAALRELMRRCWDEDMDTRPEFEEVEDTLLQITHREATW 359          
BLAST of mRNA_P-littoralis_Contig889.26.2 vs. uniprot
Match: A0A835ZE86_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE86_9STRA)

HSP 1 Score: 189 bits (481), Expect = 2.390e-47
Identity = 115/300 (38.33%), Postives = 168/300 (56.00%), Query Frame = 1
Query:  376 SKTSGFHDNMSLEMLTNVLPLDKGGFCVACSCTYMGQRAVLKVPKR--QGPKSAIADLLVEIGIYKRISERGGHPNIAHAFGSGFYLLEEKPTPFLVLELLEGGSLAEAIERSRRESDADSAEGWSD------------PMSRLPVALELADALQFLHRDAIPCG---FILHRDIKPTNIGLSAEGHVKVFDLGLSVVQEVRGGSQDQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWELCTLRKPFAGMNVADHYREVVIGRLRPPLHPQWPAGLQNLMQACWHEDPDHRP 1224
            S T G+   +  E L N+  + +G  C   S  Y G + V+K+P+   + P+ A  DL VE+ +   +     H +I    G+G  L E  P  FLVLE LE G+LA+ +         ++  G++              ++ L  A+ELA+AL++LH     CG   F++HRD+KP NIG  A+G +K+FD GL+   + R    + +Y M+G  GS R+M+PEV + LPYNEKVDVY+F ++LWE+   R+ F GM+V D Y+ VV G +RPPL   WP  L+ L+  CWH D D RP
Sbjct:  127 SNTQGY-TKIVWEDLKNLFYMTEGAMCRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELEVLWGLD----HRHIIKLLGAG--LREIPPYRFLVLEYLEMGTLADRLNAGAPPGQEET--GYNKIIKGTKKYQRFHQVTMLERAMELAEALEYLHHSV--CGGAAFVVHRDLKPDNIGFKADGTLKLFDFGLARCVKRRA-RVNARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLQYRRVFEGMSVGDFYQRVVNGGIRPPLDSSWPPALRKLIDLCWHADVDKRP 414          
BLAST of mRNA_P-littoralis_Contig889.26.2 vs. uniprot
Match: D7FS28_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS28_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 3.250e-47
Identity = 111/281 (39.50%), Postives = 158/281 (56.23%), Query Frame = 1
Query:  445 GGFCVACSCTYMGQRAVLKVPKRQGPKSAIA--DLLVEIGIYKRISERGGHPNIAHAFGSGFYLLEEKPTPFLVLELLEGGSLAEAIERSRRESDADSAEGWSDPMSR----------LPVALELADALQFLHRDAIPCGFILHRDIKPTNIGLSAEGHVKVFDLGLSVVQEVRGGSQDQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWELCTLRKPFAGMNVADHYREVVIGRLRPPLHPQWPAGLQNLMQACWHEDPDHRPSILEAREIL 1251
            G  C   S    G +  +K+P++   + A+A  DL VE+ + KR+S    H +I    G+G    E+KP  FLVLE LE G+LA+ ++    E+   SA       ++          L  ++ELA AL+ LH   +P  FI+HRD+KP N+G  A+G +K+FD GL+ V + R    + +Y+M+G  GS R+M+PEV + LPYNEKVDVY+F ++LWE+   R+ F GM V D Y  VV    RP L   WP  L+ L+  CWH D D RP+     E L
Sbjct:    4 GAMCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVS----HKHILGLIGAGNR--EQKPHRFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLHYH-MPDMFIVHRDLKPDNVGFKADGTLKLFDFGLARVVKRRN-RVNARYEMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLEDRRVFDGMGVTDFYERVVNAGARPNLDSAWPQDLRKLISQCWHADVDRRPNFRTIAERL 276          
BLAST of mRNA_P-littoralis_Contig889.26.2 vs. uniprot
Match: A0A6H5L2R6_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R6_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 4.720e-46
Identity = 113/290 (38.97%), Postives = 162/290 (55.86%), Query Frame = 1
Query:  418 LTNVLPLDKGGFCVACSCTYMGQRAVLKVPKRQGPKSAIA--DLLVEIGIYKRISERGGHPNIAHAFGSGFYLLEEKPTPFLVLELLEGGSLAEAIERSRRESDADSAEGWSDPMSR----------LPVALELADALQFLHRDAIPCGFILHRDIKPTNIGLSAEGHVKVFDLGLSVVQEVRGGSQDQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWELCTLRKPFAGMNVADHYREVVIGRLRPPLHPQWPAGLQNLMQACWHEDPDHRPSILEAREIL 1251
            L+ V  +  G  C   S    G +  +K+P++   + A+A  DL VE+ + KR+S    H +I    G+G    E+KP  FLVLE LE G+LA+ ++    E+   SA       ++          L  ++ELA AL+ LH   +P  FI+HRD+KP N+G  A+G +K+FD GL+ V + R    + +Y+M+G  GS R+M+PEV + LPYNEKVDVY+F ++LWE+   R+ F GM V D Y  VV    RP L   WP  L+ L+  CWH D D RP+     E L
Sbjct:  208 LSKVTYMTMGAMCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVS----HKHILGLIGAGNR--EQKPHRFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLHYH-MPDMFIVHRDLKPDNVGFKADGTLKLFDFGLARVVKRRN-RVNARYEMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLEDRRVFDGMGVTDFYERVVNAGARPNLDSAWPQDLRKLISQCWHADVDRRPNFRTIAERL 489          
BLAST of mRNA_P-littoralis_Contig889.26.2 vs. uniprot
Match: A0A7S2E226_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E226_9STRA)

HSP 1 Score: 186 bits (473), Expect = 6.660e-46
Identity = 118/308 (38.31%), Postives = 162/308 (52.60%), Query Frame = 1
Query:  373 PSKTSGFHDNMSLEMLTNVLPLDKGGFCVACSCTYMGQRAVLKV--PKRQGPKSAIADLLVEIGIYKRISERGGHPNIAHAFGSGFYLLEEKPTPFLVLELLEGGSLAEAIERSRRESDADSAEGWSDP----MSRLPVALELADALQFLHRDAIPCGFILHRDIKPTNIGLSAEGHVKVFDLGLSVVQEVRGGSQDQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWELCTLRKPFAGMNVADHYREVVIGRLRPPLHPQWPAGLQNLMQACWHEDPDHRPSILEAREILLQICLVEGG 1278
            P   SG   N+    L NV  L  GG     +    G+  V+K   P+ Q    AI ++ +E+ I+ ++     HP I    G+G      K   F+VLE L+GG+L++ +    R  D      W       +  L  A  +ADAL + HR AIP    LHRD+KP NIG + +G VK+ D GL+ + +    + ++ YQMSG  GS R+M+PEV K LPYN+K DVYSF I+LWEL   +KP+ GMN  + Y  VV G  RP ++ +WP  L  LMQ CW  D D RPS     E L ++   E G
Sbjct:  380 PHAVSGASLNLKWGQLNNVEYLTDGGNNWIHTAVLNGRAVVVKTLKPECQDVALAINEIELELDIHSKLD----HPFICGLVGAG---TTSKGVRFIVLERLDGGTLSQMLGYDNRIRDRRR-RFWRKKQFAYVEVLKFARCIADALDYCHRLAIPGAMCLHRDLKPDNIGFAIDGTVKILDFGLARIVKYSDLNSNEVYQMSGQTGSLRYMAPEVAKCLPYNQKADVYSFGIILWELNAYKKPYDGMNKEEFYERVVEGNERPMINKKWPEELVQLMQDCWSSDMDVRPSFRVIVERLDEMLSKEKG 679          
BLAST of mRNA_P-littoralis_Contig889.26.2 vs. uniprot
Match: A0A835Z8J1_9STRA (Serine/threonine-protein kinase CTR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J1_9STRA)

HSP 1 Score: 182 bits (461), Expect = 2.710e-45
Identity = 106/278 (38.13%), Postives = 155/278 (55.76%), Query Frame = 1
Query:  418 LTNVLPLDKGGFCVACSCTYMGQRAVLKVPKRQGPKSAIA--DLLVEIGIYKRISERGGHPNIAHAFGSGFYLLEEKPTPFLVLELLEGGSLAEAIERSRRESDADSAEGWSDPMSRLPV---ALELADALQFLHRDAIPCGFILHRDIKPTNIGLSAEGHVKVFDLGLSVVQEVRGGSQDQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWELCTLRKPFAGMNVADHYREVVIGRLRPPLHPQWPAGLQNLMQACWHEDPDHRPSILE 1236
            L+ V  L  G  C   + TY  Q  V+K+ ++    +AI   +L +E+ +  R++      NI    G+G      +P  FL++E L+GG+L++         D         P + L +     ++AD L++LH +AIP   +LHRDIKP NIG + +G  K+ DLGL+     R   QDQ + M+G  GS R+M+PEV +  PYNEKVDV+S+ +VLWE+ TLRKP+ GM     Y  VV G +RPPL+ +WP    +L+ ACW ED   RPS  +
Sbjct:  239 LSEVEFLVNGSRCTIYTATYNHQACVVKLLRKDAVDAAIVRRELELEMELLMRLNNE----NIVRLLGAGI-----EPERFLIIERLDGGTLSQRCGSGGAVRDRRRRFKRKQPFNYLELLKCGRQIADGLRYLHDEAIPGRIVLHRDIKPDNIGFTKDGDAKLLDLGLAKAVP-RSELQDQTFAMTGETGSTRYMAPEVAESRPYNEKVDVHSYGMVLWEMATLRKPYDGMARDQFYSAVVRGHVRPPLNKRWPKEFSDLLAACWAEDFKARPSFAD 506          
BLAST of mRNA_P-littoralis_Contig889.26.2 vs. uniprot
Match: A0A7S2LC32_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LC32_9STRA)

HSP 1 Score: 176 bits (446), Expect = 4.490e-45
Identity = 109/303 (35.97%), Postives = 156/303 (51.49%), Query Frame = 1
Query:  385 SGFHDNMSLEMLTNVLPLDKGGFCVACSCTYMGQRAVLKV--PKRQGPKSAIADLLVEIGIYKRISERGGHPNIAHAFGSGFYLLEEKPTPFLVLELLEGGSLAEAIERSRRESDADSAEGWSDPMSRLPV---ALELADALQFLHRDAIPCGFILHRDIKPTNIGLSAEGHVKVFDLGLSVVQEVRGGSQDQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWELCTLRKPFAGMNVADHYREVVIGRLRPPLHPQWPAGLQNLMQACWHEDPDHRPSILEAREILLQICLVEGG 1278
            +G + NM    L N+  L  GG     +    G+  V+K   P+ Q    AI ++  E+ ++ R+S    H NI    G+G   L  K   F+VLE L+GG+L + +    R  D          +S L V   A  LADAL + H  A+P   +LHRD+KP NIG + +G +K+ D GL+ V +      +  Y +SG  GS R+M+PEV    PYN K DVYSF I+LWE+   +KP+ G+N    Y  +V G  RPP++ +WP  L +L+  CW  D + RPS     E L  +   E G
Sbjct:   40 TGANLNMKWNSLQNIEYLTDGGNSWIHTAVVNGKSVVVKTLKPECQDMAMAINEIEAELDVHARLS----HENIVALVGAG---LTSKGVRFVVLERLDGGTLTQVLGYDTRIRDRRRRFFKRKQLSYLEVLNHARSLADALGYCHGKAVPGTLVLHRDVKPDNIGFTIDGTLKLIDFGLAKVVDNATPDCNDVYSLSGETGSLRYMAPEVADNRPYNHKADVYSFGIILWEMLAYKKPYDGLNRESFYVRIVDGGERPPVNKKWPKELVSLVTDCWSADIEQRPSFSAVVERLTNMISAEKG 335          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig889.26.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMU8_9PHAE2.200e-14873.23Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A6H5L2N4_9PHAE4.090e-11058.61Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A6H5K4Q0_9PHAE9.290e-6140.59Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A6H5LAW2_9PHAE1.090e-5837.85Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A835ZE86_9STRA2.390e-4738.33Kinase-like domain-containing protein n=1 Tax=Trib... [more]
D7FS28_ECTSI3.250e-4739.50Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5L2R6_9PHAE4.720e-4638.97Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A7S2E226_9STRA6.660e-4638.31Hypothetical protein n=2 Tax=Helicotheca tamesis T... [more]
A0A835Z8J1_9STRA2.710e-4538.13Serine/threonine-protein kinase CTR1 n=1 Tax=Tribo... [more]
A0A7S2LC32_9STRA4.490e-4535.97Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig889contigP-littoralis_Contig889:90850..100943 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FPX1
PFAMsAnk,Ank_2,Ank_3,Ank_4,COR,LRR_4,LRR_8,Pkinase,Pkinase_Tyr,Roc
Model size2644
Max annot lvl2759|Eukaryota
KEGG koko:K14304
KEGG TC1.I.1
KEGG Pathwayko03013,map03013
KEGG ModuleM00427
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0000902,GO:0000904,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005794,GO:0005795,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006914,GO:0006928,GO:0006935,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0007528,GO:0008088,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009267,GO:0009605,GO:0009653,GO:0009894,GO:0009987,GO:0009991,GO:0010008,GO:0010506,GO:0010721,GO:0010769,GO:0010771,GO:0010941,GO:0010970,GO:0010975,GO:0010977,GO:0012505,GO:0016020,GO:0016043,GO:0016049,GO:0016192,GO:0016197,GO:0016241,GO:0016301,GO:0016310,GO:0016482,GO:0016740,GO:0016772,GO:0016773,GO:0017016,GO:0017137,GO:0018105,GO:0018193,GO:0018209,GO:0019222,GO:0019538,GO:0019899,GO:0022008,GO:0022603,GO:0022604,GO:0023052,GO:0030030,GO:0030100,GO:0030154,GO:0030182,GO:0030424,GO:0030425,GO:0030705,GO:0031090,GO:0031175,GO:0031267,GO:0031323,GO:0031329,GO:0031344,GO:0031345,GO:0031410,GO:0031594,GO:0031667,GO:0031668,GO:0031669,GO:0031902,GO:0031982,GO:0031984,GO:0032418,GO:0032501,GO:0032502,GO:0032879,GO:0032886,GO:0032989,GO:0032990,GO:0033036,GO:0033043,GO:0033267,GO:0033554,GO:0034613,GO:0034976,GO:0035556,GO:0036211,GO:0036465,GO:0036477,GO:0040007,GO:0040011,GO:0042147,GO:0042221,GO:0042330,GO:0042594,GO:0042995,GO:0043005,GO:0043025,GO:0043170,GO:0043195,GO:0043198,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043679,GO:0044087,GO:0044088,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044297,GO:0044306,GO:0044422,GO:0044424,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045202,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0046907,GO:0048311,GO:0048312,GO:0048468,GO:0048488,GO:0048489,GO:0048519,GO:0048523,GO:0048588,GO:0048589,GO:0048666,GO:0048667,GO:0048675,GO:0048699,GO:0048731,GO:0048812,GO:0048814,GO:0048846,GO:0048856,GO:0048858,GO:0048869,GO:0050767,GO:0050768,GO:0050773,GO:0050774,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0050808,GO:0050896,GO:0051020,GO:0051049,GO:0051093,GO:0051128,GO:0051129,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051493,GO:0051640,GO:0051641,GO:0051645,GO:0051646,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051683,GO:0051716,GO:0051960,GO:0051961,GO:0060284,GO:0060341,GO:0060548,GO:0060560,GO:0060627,GO:0061174,GO:0061564,GO:0061845,GO:0061919,GO:0065007,GO:0065008,GO:0070507,GO:0070727,GO:0071212,GO:0071496,GO:0071704,GO:0071840,GO:0090128,GO:0097447,GO:0097458,GO:0097479,GO:0097480,GO:0097485,GO:0097708,GO:0098588,GO:0098657,GO:0098693,GO:0098791,GO:0098793,GO:0098805,GO:0098852,GO:0099003,GO:0099111,GO:0099174,GO:0099504,GO:0120025,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:0140096,GO:0150034,GO:1900242,GO:1901214,GO:1901215,GO:1901564,GO:1902115,GO:1902284,GO:1903421,GO:1990033,GO:1990138,GO:2000026,GO:2000171,GO:2000331,GO:2000785
Exons3
Evalue8.14e-156
EggNOG OGsCOG0515@1|root,KOG0192@2759|Eukaryota
Ec32 ortholog descriptionSerine/threonine-protein kinase CTR1
Ec32 orthologEc-01_008360.1
Descriptionprotein kinase activity
Cds size1275
COG categoryKLT
BRITEko00000,ko00001,ko00002,ko03019,ko03036
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791776.1058445-UTR-P-littoralis_Contig889:90849..922031680791776.1058445-UTR-P-littoralis_Contig889:90849..92203Pylaiella littoralis U1_48UTRP-littoralis_Contig889 90850..92203 -
1680791776.1586711-UTR-P-littoralis_Contig889:100928..1009431680791776.1586711-UTR-P-littoralis_Contig889:100928..100943Pylaiella littoralis U1_48UTRP-littoralis_Contig889 100929..100943 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791776.1209588-CDS-P-littoralis_Contig889:92203..925361680791776.1209588-CDS-P-littoralis_Contig889:92203..92536Pylaiella littoralis U1_48CDSP-littoralis_Contig889 92204..92536 -
1680791776.1346319-CDS-P-littoralis_Contig889:93440..935551680791776.1346319-CDS-P-littoralis_Contig889:93440..93555Pylaiella littoralis U1_48CDSP-littoralis_Contig889 93441..93555 -
1680791776.1457307-CDS-P-littoralis_Contig889:100101..1009281680791776.1457307-CDS-P-littoralis_Contig889:100101..100928Pylaiella littoralis U1_48CDSP-littoralis_Contig889 100102..100928 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig889.26.2prot_P-littoralis_Contig889.26.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig889 92204..100928 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig889.26.2

>prot_P-littoralis_Contig889.26.2 ID=prot_P-littoralis_Contig889.26.2|Name=mRNA_P-littoralis_Contig889.26.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=425bp
MGFADYQAGFGNNKAVNEDSTAATTTTITSTMFSDSEGQRRTEFSTTTTA
MPQWHMPTGYDDHYEYHHHHHQHHHHQQQQQQYEQAMPPAGCFGASSSAS
TSTSSTSSAGAASGDFPCSPSKTSGFHDNMSLEMLTNVLPLDKGGFCVAC
SCTYMGQRAVLKVPKRQGPKSAIADLLVEIGIYKRISERGGHPNIAHAFG
SGFYLLEEKPTPFLVLELLEGGSLAEAIERSRRESDADSAEGWSDPMSRL
PVALELADALQFLHRDAIPCGFILHRDIKPTNIGLSAEGHVKVFDLGLSV
VQEVRGGSQDQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWE
LCTLRKPFAGMNVADHYREVVIGRLRPPLHPQWPAGLQNLMQACWHEDPD
HRPSILEAREILLQICLVEGGWAA*
back to top

mRNA from alignment at P-littoralis_Contig889:90850..100943-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig889.26.2 ID=mRNA_P-littoralis_Contig889.26.2|Name=mRNA_P-littoralis_Contig889.26.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=10094bp|location=Sequence derived from alignment at P-littoralis_Contig889:90850..100943- (Pylaiella littoralis U1_48)
CCTCCTCTTCTCCTTATGGGATTCGCTGATTACCAAGCCGGTTTTGGAAA CAACAAGGCCGTCAACGAGGACAGCACTGCCGCCACTACGACCACCATTA CGTCCACTATGTTCAGTGACTCGGAGGGCCAGCGGAGGACCGAATTTTCC ACCACCACAACTGCTATGCCCCAATGGCACATGCCTACTGGCTACGATGA TCATTACGAGTACCACCACCACCACCACCAACATCACCACCACCAACAGC AGCAACAGCAGTACGAGCAAGCGATGCCGCCCGCCGGCTGCTTCGGCGCC AGTAGCAGCGCCAGCACCAGCACCAGCAGCACCAGCAGCGCGGGAGCAGC ATCCGGCGACTTTCCTTGTTCACCTTCAAAAACTTCCGGTTTTCACGACA ACATGTCTCTCGAGATGCTCACAAACGTTCTGCCACTCGACAAGGGTGGC TTCTGCGTGGCCTGCTCCTGCACTTACATGGGTCAGAGGGCCGTGCTGAA GGTACCCAAGCGGCAGGGACCGAAGAGCGCGATAGCCGATCTTCTGGTAG AGATCGGTATCTACAAGAGGATATCCGAACGGGGGGGGCACCCCAACATC GCCCATGCTTTCGGTTCCGGTTTTTATCTCTTGGAGGAAAAGCCAACCCC GTTTCTCGTGCTCGAGCTGCTCGAGGGTGGCAGCTTAGCCGAGGCCATCG AGCGAAGTCGACGGGAGAGCGATGCCGACAGCGCTGAGGGTTGGAGTGAT CCCATGTCGCGATTACCGGTGGCGCTTGAGCTAGCGGATGCGCTGCAGTT TCTCCACCGTGATGCCATCCCCTGCGGCTTCATCTTGCACAGGTGAGCGT AGAGGCAGCGCAGGCAACCAGGCGATGATCCATTGTCTTGGATTATCATA GATATACTGTGCATATCATACACAGGTGTTCACAAAAATTGCGTCGGTGC GCAACGTTGATACTCTTTAGGCCTGCGCACCCCCATTCCCGCCCCGCGCG CTCACGCCCGGAAAGAGGTACTTGAAGTATGCAGAGTTGTTCTTTCAAAA CGTTGCGCAACTTTTCTCGCAGGTGTTGCTCGTCACACGTTCAACGAGCT GCTCACACTGCTTCCGCTGTACGCTGCATCTCATGGTTGCTGATGATGCC ATGTCCTGTGTCCCGTTTAAAACTAATAGTCTACATAGTTGTATTTTTTA ATTGCGCAGTCATATGGTACAGGCAGAAGAATTTTTCCAAAGGGGGTACC GGTTTTTTCTCCGTCATTTTTGGGAGTTGACAGGTGAAACAAACTTTTCC AGAATCGCGCGGCCGAGAGGAACTCAAAACCGGTCTTAAAAAAAAATTCC ATGAACAATGGCCATTTTCGACTTTTTTTGGGATTTTTTTTTTTTTTCCT TTTTTTTCCTTCCTTTTTTATCCTGAAACCGCAAAAAAAAAATGCCCCTA ATCGAAACTGAATTAACCCCAACCCACCACCCAATCCATGACCGACTTGT CGAGAAGACACTTCGTGATAGCGAAGCAAGGTACTGCTGTACTCATACAT ATGTATATATTTAAATACATCTCATATACTAGCAGAGATTGGAACGATTT TTAATGTGAAGAAAACACACACACACACACACACACACACACACACACAC ACACACACACACACACACACACACACACACACACACACACACACACACAC ACACACACACACACACACACACACACACACACACACACACACACACACAC ACACACACACACACACACACACACACATACTCCTCCGTATATATATACAC ATGTACAAACAATTCACAGCAGTAGGTAAATATACCTGGTATGATATGAT ATGTATATAAAAGTAAAATACACAACATCAACTTTGCGTAGGAGCCGACG CCACCGTCTCCAAACTCGTGTCCAAGCGCGAGTCGTTCAAGTGCTTTAAT GATTTGTTCAAGTGTTTCATGGAGTCTATCCTGGCTTCCCGCGAGGCTGC AAGTGCCTTCTCCTCGTTTTTCTTGCGCTCCTCGGGTGATGCGGCCGTGC TCTTTGCCATCAACACGGCATCGACCCGATCAGTAGATGAGCGGTGGCAC GTCCACTTCTTTAGGTCTCTGTATTGCATGTAACCGTCGAGCCCCGTGGC ATACGCCTCAACATAGAGCCACGAAATCCGGGCCCACTTGCGAATGAGCG ACAGAGACATGGAGCTAAGGGTGGCAGGGAGTCGTTTTAGAAGACTCTTG ATGGAATAATCGCACACCCGGCGTTCGATGGCCTTAGAGTGCCCCCAGAC TCGCTCGATGGCGTTGCACTCCGGGTGATACCTGGAGAAGGAAAATTCAC GGAGACGTGCAGCGGTGTTCTTAGTTATTCGTATACAAGTCGGTTAAAAT CATGTGCCACTTCAGAAAATACCTCATGACCGATATTATGCGAAAACACT TACTTTGGGAGGAAGATACACCGATGTCCGGCTGCCTCGAAAACCTCCTC CACGCGATTCTTCTGTTCCTTGAATGCCGGCAGATTGCTGAGTACGAACC GGAGGCAACAGCGTCGAGTATCACCCTCCCCTTGCCGATCAGGTTCCGTA TCCTCACCCCCTTCATTACCACTAGCTACCAGCGATGATGCCCGCGATTC CCCCCCCTCGTTGTAGTGTTTCTTCTGCTCCGCCAAGGCTTTCGCCTCGG CGGTACACCTTGGCAAAAAAATCACAACGGGCACCAGTTTCATTTTAAAG GTGACAAAACCCTTGCTGTGCTATATACTGCTGAACTAATATACGGCTGC ACTACTGCTGTACCTGCTGTACAGTACTGCTGTACTGCTGTGCTATATAC TGCTGTACTAATATACTGCTGTACTGCTGCACTGCCATACCACTCTGCTG TACCATTCACCTCGTTCAGTGCAGCACTTGCTTCGAGGTACACTTTCTTC CGGTGTGCCTCTCGAGCCACACGCGCAGCCCTCTTGTTCTCTTTCCGCTT CGCTTCTTTGCGTGCCATCCACCCTTGCCGGTCTCTCTTCTTCCCACGAT TAGGTAAAGTCTCTTTGGTCCAGCTCTCAGGTCTCCTTGTTGGTCGCCCC GAGCCCCCTGGGAGACCTGTGGGTCTACGTTTGGGTTGCTCAAAGTAGCG TGGGGCAGGCTTCGACGAGGTGGTCTGACGTGTTGCAGGAGCGGGGTTCT TGTTCGCTGCTGGTGTCTGTTGTTGCTCTTGCCCGCGGTCTTGATCCTCC TCCTCCTCCTCCTCCTCCTCTTGCTGCTGCTGCTGCTCCATCTCACTCGC CCGTGCTGCAGCATCATCGTTCCAATCGGAATCTCCAGATGACGATTCCC CGTCCGCATAACCAAACACCATACCCTCCGATGCGGAGCTTTCTTCACAA GCAGGCCCGAGGTCCACACGAGACATTTCGAGGTCCACACGAGACATTTC GTCACCTCCAACCCAGTCGGCAAGGGCGTTAGTGTGCTCGGCACCCTCGC CACTCTTACCACCGCAGTCCGACTCGAAGCCGAGGTCTATCTCGAAGTCC ATGGGTGACAGTCCCGTCCCAATTGCGCCGCTTTCATCATCTGCGAGAGC AGGCAAGACTGGGAAGTCCGTCGTGGGAACGGGGAGAAGATCAGAGACGG GAGAGAAGAACGATACGATGGACTTCTGACCTCTCCATCGCTCCTGGAGT TTGCGCCGTCGGGTAGACCTTTCGCTAGTCCCATCCGCCGCCCTGCCAGT CAGCTCGCTGTCTTGGTCTGTGTCAGTGAACTCAGCATCGGCTTGGTACG CAAGGTGCTCAGCACGTTCGCCATCCAAGTCCACGTCATCACGAGCGGGC GGGGCGAACTTTCCTTTCGCAGTGAAGGCGTACTTCTTCTTTCGTGGGCG CCCGCCGGGCATGGTCCTCGTGTGTGGGTGTGTGGGTGTGTACACCAACG TGTGTGTGCCACCTGGTGTGTACTTGATGGTTGTGCCCTGTTGGTACTCT AACTTCAAGTGTTAATTATTCAAAAAAAAATACTGAGGGCGCCATTTTTC ACAACGGCTTTTCTCGGCCCACAGAGTTTTTTTCAAAAAAAAAAAAAAAA AAAATGTCCTGGGTACAGGTCCAATTCATCCGAATCCGAGGAGTTTTTCG ACATCCATCGTGCCAGTTTTGCGCTAAAATCTCCACAGCTGGAGCAGGGA AAAGTGGGTTTTTCGCCCATATCTCGCTTAAAAATAGATGAAACAAGAAT CTGCTTCGACAGGAATCTGCCCCTGGTCGAGATACGTTCAAAACCGGTGT CAAAAAAAAAGATGACACCTGTGTCGACCTGCAAAATCTTGACCAATTTT TATCGAAAAAACGAATTACTCCGACGCAACAAAAAAAAAAAATCTGCCAC GATGGTTCGATCCGTCTGAAAGAGAGCTTTCCGTCGATATATTTTATGTC TTGTAAAAGTAAGTGACCACCTCAAAACAACTCAATATATAAATGTCGAA CTTTTGGAAAAATTCTTCTGCCTGTACCATATGATGCTGATACCGCCGTA ATAATAACCAACCGACAGATAGATTCAGTAGGATAACATGCCCGGGATAT TTGTCACACCGTCGTCCTACAGGCGGTATGAGCTGGGCGGTACATGCCGC CCCACATTTATTTTTAGGCACAGCAGACGACGAGTAGGATTCACGATCGG CCTTGACTCATCAATTGTTACAAGGCCTTCGTAGTATATTTCAGCTGAAA CAGCCAACATGTGTGCAATAATACTTCGTCGGGCACTCGCAGGCAAGTCG TGTCTGGGCGTAATATTTTTCCCACGGGCGCAAACAGCACCAATTGCGTC GTCTGGGTTTCAATCCGACACGACTCACACTCTGGCTGTGATTCCCGACT GCATGTGTGACCCCGGTTGGAGCGTCCACCTACCCGAAAGGTGTAGAGTG GCGTCCAATTAAAGGGATGACAACACACACACATGAACAGAGGCACAGAG ACACAACAAATGTGTTGCACATACATGCAACATGCAAATACAAACCTACA CAGAAAACGTCTACTATACTGTATAATATGATGTGGTAAGTGTTGTCGTT AAACTGAGAATAATTTGCTGGAGATGTCAACCAACGAGCTGCCATCTAAA ACAGGTCAAACGGCTCCCTTGACAGCTCCCAGAACACGTGTAGATGTATC GCGAATACCGGACGCACGTTGCTCTCTACCTCTCTTTAAAAACGTACCAG GTAGACGAGTATTCAGCAGTTTAACAGCAGAGAGTGTCAAACGGATAATT GATACTGAAGTATCATACGTACTTCGTAATTCGTTGCCCATCGTTGGTTG CGCATTTTGTGGTCCATCTCCTCAAGTTTTTTTTTTACATATGTACAGTC AGTGTGAAAGAACACTCAGCATCAGCATATGTAGCCAACAAAGAGAGGAA AAAGTACGATACTGGATTCTCCATTGTAGCAGTAAATTACCCCGTTCACA TGATCTTTATCGTTACTTCGTACTCTTGCCCGCTCCGTAGATATTATGTG TCTTCGTCGCCGGCTCTCTCCTTGAATCTGCATGCGTGTGCTGTGGTGTA TGGATTTTGGATATTGAGGGCACAGGATCCCCCGATTCTCGCGGTTTCTC CGGTACTCGCATCAGCATCGTCTCCGTCTTCTTCGATACGTATCATATGA TATATGATACGGTCAAGCCAAAGGCCGCAAGCAAACATAATTTTAGCTTC GGACCTCCGGGTGATCTCGAAACGAAGCCTGCATCGTCGGTGTACAACAT CCTCCGAACGCACTCTGGGGGGTCTCCGTCCTTCGGTCTGCCCCCTCCTC CTCTTCGTTCAAGGTGCACCAAGTCCCTCAGAATGATGCTATCCTTGCTG AAGCCCCAGTACCATACAAGACGTCAATAAATACCTCGTTACAAAAGCAG TACACTAGACGCCTTATATCTATCCATCAGCCTTCGCTACTAGTACGACC GCAGCAGAATGTGAATGATCATATATACGTAGCGCCGCACCTTCCACGCC GCACTCCCTTCCGCGCTTACGGCCTCTGCTGCTGGCATACGACAACGAGG TCCCACCGGAGCCTCAACTGCGTTGTCGTCTACCAAAACCGTCATCACCA CCAGTCGTACATCGTTCGGTCTCTTTTCTCATTACGATCTAGAGAGACAG GAGAGAGTACGCCGCATCAAACAACCGGTGGGTAGTTGAAGAGATAAAAA ACAATGCATCAACAACGTCAATGCTTGATACACTCCAAAACACAACAGAA ATACAGACTCGAGAAAAAATCGAAAACAAAAACGACCAAGAACATCAGAG CCCTCAATACGAGACGATCTCAGGGGCTGAGAAGAAGAGAAGAAAAAAAA CAAGAAGTCAAAAGAAAAGAGAAAGGAAAAGGGGCCGAAGAAAGAAAACG GACTAGTAGGGGGGTGAGGAATACTAGTGGATCGGGGTTGAGAAGCAGTG TGCGTTGGAGGGCCGCTTCTCAAATAACTGCATTAAGCCGTGTGCGTTGC TGTTTGGTGGCGTATGATATGCCTGCTGCTTCACAGCAGTGCTGCTGCTG CAGGACAGCTGATGGTGGTGTGCTGGTGTGCGCGTGCGCCAGCACAACGA ACGCAAAACGCCTCTCATCATTTGTCACAAAAAAGGGACCCCAAAAATAA CGCCGTACGCACAGGACAGGAAATAACAAGATAGCCGTACGCACAGGACA GCGGCTGCGATGGACCCAGCAACAGTGGGTAGATGCTATTTACCTCTTCA CTTCAAGCCCTTGGTCGTAGCGTTCTGTGCTGAACTGGTGTCAAAGTGTT GCAAAATGTGGCCAATATCTCGGACACACACACCATAAACATCGAAAATT AAATAAAGGCACCCCTGTCTCCGATATAGTCTAATTTAATTATTTTTTTT CGCACATACACTCAAAGCTGCACATCACGACAAGTCAGTATGAATTCGAA GCAGTTCGGCAAGGAACTTTCACTTCGCTTCGCTCGTGGCCTGCTTCTCA ATAAAAATAAATAATGGAGAAGAAGAAACAATAGGGGGAATATATTATGG GTGTGTACACGTCATCAGTCGCAAACATACAAGGTCTGCGCGCTCACGAG AGAAGTGACGCCATACCTGCATCATAGATCATCATAGATCGCCCAGGGCG ACAAAAAAAATTCCCGACCCCCGTGTGAAAGCACATCTCATCCCCCCCGC TCCCCCATCCTTCAAACGACGCGCGCACCCTCTGAATGCTCACTCGCCTT CCCACTTACCTACCTTTCGTACCCCGCCCCTGCAATCCGCAAACAATTGT CATGCATACTCTTATCATCGTACGACGCACCCGCGCAGAGATATCAAGCC GACAAACATTGGGCTCTCTGCGGAGGGGCACGTGAAGGTGTTCGATCTGG GGCTGTCAGTGGTGCAAGAGGTTCGCGGAGGGAGCCAGGACCAGAAGTAC CAGGTACGAAATTTTACTTTGTCGACTCCAAGAGGTGTTGCGGAAGTGCA CCTCTCTTGCTTGGGTGCCTTTGACGTCGGGATACGCACGTACATATCGT AGTACTACAGCACCTGAATACGTTTTCGTTACGACCCAGAGAATACGGGG GGGGGGAGCATTGATAGTTTTCTCGCGGTCGGTGTCGTCGTCGTGATATG GCCTCTATCTGTGAGGAAGATGTGGTGAATGAATTTCCCGCATCATCCAT CCATCCATCTATGATACATCTATATGTCTGCGTGTTTTTGCTCCTTTCCC ACACACAAAAAAGGCTTCACCTGACGTTCCGAAATAGCGCAGGTTTATGG TGCACGCCCCTGTGATTTTTTCTCTACTCATACATTTTAATTTTGTTCTC CCGTGAGTGTTTTTTTTTTTATGTTGACCACGACAAAAGGTACCCCTTCG TTGGGCAGTATTCAAACCATGCGCCCATATTTTTTGTTTTTCGTTCTACT GCTGTTGTTGTGAATGGGCATTGTCAAGAAGCACGATGACCACTGGACCA CCAGTCAGGGTCAGTGGCCATCGTGCTTCTTAACAGCCATGTTTTATTTT ATTTATATTTATTTTCCAGCGATGGGTGGCCTGGTTGGTGCTCTGTATAG ATCAATCAGGAAACTGCGTGCCACTTTTTCCTTGATACAGAGTCGGTCGA AGTTTTTGCTTGACAAAAAATATGTCGTTTGTCGTGGTGCGGTTCGGACA GAGGTTGAAACCGAATGCATCCACCATACATAACACGTGACGTCACTACT AACCCTCACCCCGCACAAAACATGTGTTAGAACCACCATGTGGTGACACG GACTGGCATCTCCCACCGCACCCGCGCGCCCACCCCCCCCCCCCCAACTT CTACCAGATGTCAGGCATGGCGGGTAGCAAGCGCTTCATGAGCCCGGAGG TTTGCAAGGGCCTCCCGTACAACGAGAAGGTGGACGTCTACTCCTTCGCC ATCGTGCTGTGGGAGCTCTGCACCCTCCGAAAGCCGTTCGCCGGCATGAA CGTGGCCGACCACTACCGAGAGGTGGTCATCGGCAGGCTTAGGCCGCCTT TGCACCCCCAATGGCCGGCAGGTCTGCAAAATCTTATGCAGGCGTGCTGG CACGAGGATCCGGACCACCGGCCGTCGATCTTAGAAGCCAGGGAGATTTT GCTGCAAATATGCCTGGTCGAGGGTGGGTGGGCCGCCTGAAGCACACCCC TGCTGTGATGTCGTACTTTTTCGCTGATGGGTGTCATCCTGTTCTGTTGA TGGAGCTCTGGAATTGTTTCGTAAGTCGGGTCGTGGTTGCGTCGTTATTT GACATTTGCTCCAACGGATTTTTATGTATGTTGTTTCATACCAGCGTACC TCGCAAGCGTATCATGTGGTTACTGTATTGTGTCTATTCCATTTTGATGT CTTGATGTTCGTCGTGTCTTGCGCGCGGTGGATCTCCCTCTGTCTGCGTC TGCTACTGTACTTCTATTTATTTACCGTTTGGTCTCGGTTTTTCTATGAT ATGATGGGTGTAAAGGGCGATGAGCCGGATAAATGATGAGTGTTTTGTTG ATGAAGCAAATCAACTGGCAGGCAGCTCTTTCCCGTTCCCGCTTTTTGTG TGTGCTGTGTTGATGCGCTCGAAATGGAAAAGGCGGTGCCGAGGTTGTGA ACGACCTCAATCACCTTTCCTTTGCGACGGTTCCGTGTTGTTGTCTCGGC TGGGCATTTTGCGTGCAGGGGGCGGGGGTTTGTCGAAGCAAGTCGTGTGA CGGCTGTTTTGAGCTTTTGGCATATATAAACGCGGCCCTGTTCGACAAAG AGTACAATATATCCTACTACCCACAACGTATATAGATAGGACATGCCCAA CTGGTTTGGAGGGTTAGAGGCGAGGAGGTTATTACCGAGGTATTGTTGTT GCATTCCTATACATTTGCGGCGTAAATGATGGGACTTGTCGTGTCTATAT TTTCGGCCACTTGCGACCAGCGGCAAACAACGTGTGCGTAGAGAGAGAAG AGTGCGGGTTCGGCGGGATATCGTGACGTGGTGACTACATTCCACGGGAA GATAGTCGGTGTGAAAACATACTTTTCAAGTTTTATGAGTGGTGGTTCGA AGGAAATCGAGAACGGCTGGATATTTAGAGGGAGTGTACGACTATAAAGT GCGTTTTTTGTGCCCCTGGTGTATCTTTTGTTGCGATACTTAAGGGGAAG AGAGAAGGTGACTGCCTGTATCAAGCTGATTGGTTCTGCGTGCATCTCAA AACAATTGCCAACGAATTGTAAATTACCCCCCGGGGATGATATATGTTTT TTCGTAAAGCCACCACTAAACCCTCCGGGGGTTCAAAAGAAGTTTTTTTT TCTTCTTTGCATCGTTACCTCGGGTGCACAACGCTATCCGGAGGGGGGAC CAAAAAAACATCTCACACATACTTCGTACGTTTTTTGCAGTCCAGAAGGA ATGACTCCTGCTAAAAATACAAGGAGCTTTCTCACGAGCGTTCCGTGGTG TCGGATGTGACTTGACGCGAAAGTGTCACTGCGACACGACGAAA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig889:90850..100943-

>mRNA_P-littoralis_Contig889.26.2 ID=mRNA_P-littoralis_Contig889.26.2|Name=mRNA_P-littoralis_Contig889.26.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1275bp|location=Sequence derived from alignment at P-littoralis_Contig889:90850..100943- (Pylaiella littoralis U1_48)
ATGGGATTCGCTGATTACCAAGCCGGTTTTGGAAACAACAAGGCCGTCAA
CGAGGACAGCACTGCCGCCACTACGACCACCATTACGTCCACTATGTTCA
GTGACTCGGAGGGCCAGCGGAGGACCGAATTTTCCACCACCACAACTGCT
ATGCCCCAATGGCACATGCCTACTGGCTACGATGATCATTACGAGTACCA
CCACCACCACCACCAACATCACCACCACCAACAGCAGCAACAGCAGTACG
AGCAAGCGATGCCGCCCGCCGGCTGCTTCGGCGCCAGTAGCAGCGCCAGC
ACCAGCACCAGCAGCACCAGCAGCGCGGGAGCAGCATCCGGCGACTTTCC
TTGTTCACCTTCAAAAACTTCCGGTTTTCACGACAACATGTCTCTCGAGA
TGCTCACAAACGTTCTGCCACTCGACAAGGGTGGCTTCTGCGTGGCCTGC
TCCTGCACTTACATGGGTCAGAGGGCCGTGCTGAAGGTACCCAAGCGGCA
GGGACCGAAGAGCGCGATAGCCGATCTTCTGGTAGAGATCGGTATCTACA
AGAGGATATCCGAACGGGGGGGGCACCCCAACATCGCCCATGCTTTCGGT
TCCGGTTTTTATCTCTTGGAGGAAAAGCCAACCCCGTTTCTCGTGCTCGA
GCTGCTCGAGGGTGGCAGCTTAGCCGAGGCCATCGAGCGAAGTCGACGGG
AGAGCGATGCCGACAGCGCTGAGGGTTGGAGTGATCCCATGTCGCGATTA
CCGGTGGCGCTTGAGCTAGCGGATGCGCTGCAGTTTCTCCACCGTGATGC
CATCCCCTGCGGCTTCATCTTGCACAGAGATATCAAGCCGACAAACATTG
GGCTCTCTGCGGAGGGGCACGTGAAGGTGTTCGATCTGGGGCTGTCAGTG
GTGCAAGAGGTTCGCGGAGGGAGCCAGGACCAGAAGTACCAGATGTCAGG
CATGGCGGGTAGCAAGCGCTTCATGAGCCCGGAGGTTTGCAAGGGCCTCC
CGTACAACGAGAAGGTGGACGTCTACTCCTTCGCCATCGTGCTGTGGGAG
CTCTGCACCCTCCGAAAGCCGTTCGCCGGCATGAACGTGGCCGACCACTA
CCGAGAGGTGGTCATCGGCAGGCTTAGGCCGCCTTTGCACCCCCAATGGC
CGGCAGGTCTGCAAAATCTTATGCAGGCGTGCTGGCACGAGGATCCGGAC
CACCGGCCGTCGATCTTAGAAGCCAGGGAGATTTTGCTGCAAATATGCCT
GGTCGAGGGTGGGTGGGCCGCCTGA
back to top