mRNA_P-littoralis_Contig887.21.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig887.21.1
Unique NamemRNA_P-littoralis_Contig887.21.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig887.21.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE)

HSP 1 Score: 602 bits (1552), Expect = 5.430e-202
Identity = 305/438 (69.63%), Postives = 354/438 (80.82%), Query Frame = 1
Query:  490 PELQPPAETVATISPGGGKQSIQVTLEPPQEGKRKLTAWVWRFVSRFSPTINDKNVVCLVKGPEGKICGHLLKWSSSTTQAQRGSGTTGLAKHLEKFHPAVVKGAKEETGTKEERKAPIRAAVAGRESPEASGGTPQ------SSLLEYMSRKMDKKQREVADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMAPTTFNKVLDALYDRVKQAVLDDLRSLREECLGMGYGGAFLGAQLDLTTVANEEYITFTVSYVKKGNTDVTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWTSQFRMMARLLILKKAINEYFR 1785
            PELQ  +E+   ++ G G QSI VTL  PQ GKR+LTAW W+ +SRF+P+INDKNVVCLVK  +G  C HL+KW+ S  + QRGSGTTGL KH+EKFHP   +  KEE GT+ ERK  I+AA+AG  S  +S   P       SSL+ YM  K+DKK+RE+ADLR+VIWCCINLRPQQMR+DDGFKLF+G LSP YV++TM+  TF+K LD LY RVK +++DDLR+LREECLGMGY GAFLGAQLDLTTVA EEYITFTVSYV+KG+TDVTRVALA RAFPG+HTA+DI PWIE LT EYF D +G  V+P DVFL FTVDQG N+VNAC  LGVPVV+CNCHRVN+AVLWALGIAG+    +NK+MGDLMKKLAALVGVFSHSAVNND LKE+QRLE DLH VY+LIRRNDTRWTSQF+MM RLL LKK I EYFR
Sbjct:   47 PELQSSSESRTMVNAGRG-QSISVTLMEPQYGKRRLTAWCWQVMSRFTPSINDKNVVCLVKKKDGTTCNHLMKWTPSEGK-QRGSGTTGLTKHIEKFHPTTAQKIKEEEGTQAERKESIQAAIAGDSSAGSSTALPSASASSSSSLVNYMVPKLDKKRREMADLRFVIWCCINLRPQQMRHDDGFKLFLGALSPDYVESTMSNDTFDKNLDTLYSRVKTSIVDDLRTLREECLGMGYSGAFLGAQLDLTTVAGEEYITFTVSYVEKGSTDVTRVALACRAFPGTHTADDISPWIEELTREYFADFMGEDVEPKDVFLAFTVDQGGNVVNACKALGVPVVKCNCHRVNTAVLWALGIAGNGR--RNKVMGDLMKKLAALVGVFSHSAVNNDKLKELQRLEEDLHAVYQLIRRNDTRWTSQFKMMDRLLALKKPITEYFR 480          
BLAST of mRNA_P-littoralis_Contig887.21.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE)

HSP 1 Score: 536 bits (1380), Expect = 3.020e-180
Identity = 272/297 (91.58%), Postives = 276/297 (92.93%), Query Frame = 1
Query:  919 MSRKMDKKQREVADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMAPTTFNKVLDALYDRVKQAVLDDLRSLREECLGMGYGGAFLGAQLDLTTVANEEYITFTVSYVKKGNTD-VTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWTSQFRMMARLLILKKAINEYFRRLAQQNP 1806
            MSRKMDKKQR++ADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMA TTFNKVLDALYDRVKQA++DDLR LREE LGMGYGGAFLGA LDLTTVANEEYITFTVSYVKKG TD VTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNA T LGVPVVECNCHRVNSAVLWALGIAG A TCKNKLMGDLMKKLAA VGVFSHSAVNNDMLKEIQRLEADLHRVYE        WTSQFRMM RLLIL KAINEYFRRLAQQNP
Sbjct:    1 MSRKMDKKQRDLADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMASTTFNKVLDALYDRVKQAIMDDLRLLREEFLGMGYGGAFLGAHLDLTTVANEEYITFTVSYVKKGKTDDVTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNAYTALGVPVVECNCHRVNSAVLWALGIAGCARTCKNKLMGDLMKKLAASVGVFSHSAVNNDMLKEIQRLEADLHRVYE--------WTSQFRMMVRLLILNKAINEYFRRLAQQNP 289          
BLAST of mRNA_P-littoralis_Contig887.21.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE)

HSP 1 Score: 531 bits (1367), Expect = 4.180e-174
Identity = 273/451 (60.53%), Postives = 334/451 (74.06%), Query Frame = 1
Query:  490 PELQPPAETVATISPGGGKQSIQVTLEPPQEGKRKLTAWVWRFVSRFSPTINDKNVVCLVKGPEGKICGHLLKWSSSTTQAQRGSGTTGLAKHLEKFHPAVVKGAKEETGTKEERKAPIRAAVA----------GRESPEAS-----GGTPQSSLLEYMSRKMDKKQREVADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMAPTTFNKVLDALYDRVKQAVLDDLRSLREECLGMGYGGAFLGAQLDLTTVANEEYITFTVSYVKKGNTDVTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWTSQFRMMARLLILKKAINEYFRRLAQ 1797
            P LQ P E+ A+I  G GK +++VTLE P EGKR+LT+W W F SRFSP+IN KNVVCLVK  +G  CG L+KW  +    ++G+GT+G++KHLE  H + V   K + G  E+  API AA+            +ES +            SSL+ YM   M K +++ AD R+V+WCCI+LRP+Q+R+D GFKLF+G LSP+YV TTMA +TFN+ LD LY  V  +V+ +LR+LREE LGMGY G FLGAQLDLTT A EEYITFTV++VKKG+TD+TR+ALA RAFPGSHTAEDI+PWIE LTLEYF   +G SVQP DVFL FTVDQGKNI+NACT LGV VVECNCHR+N+AV+WALGIAG      N  MG LMKKLAA+VGVFSHSAVNND LKE+QRLE    R+YEL+RRNDTRWTSQF+MM R+L LKK I+EYF++  Q
Sbjct:   40 PVLQVPPESEASIDVGKGK-TVKVTLEEPMEGKRRLTSWTWNFASRFSPSINGKNVVCLVKKADGTPCGRLMKWEGAAL-GKKGTGTSGISKHLEICHKSEVDKHKAKVGASEDNTAPIVAALGEFFFFCPRLKNKESRDGRVYRLYSAPSSSSLMNYMVPTMTKARKDAADRRFVLWCCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWTSQFKMMDRVLALKKPISEYFKKYPQ 486          
BLAST of mRNA_P-littoralis_Contig887.21.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE)

HSP 1 Score: 506 bits (1304), Expect = 2.500e-167
Identity = 251/299 (83.95%), Postives = 273/299 (91.30%), Query Frame = 1
Query:  907 LLEYMSRKMDKKQREVADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMAPTTFNKVLDALYDRVKQAVLDDLRSLREECLGMGYGGAFLGAQLDLTTVANEEYITFTVSYVKKGNTDVTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWTSQFRMMARLLILKKAINEYFRRLAQQN 1803
            +L++++ KM +KQRE  DLRYVIWCCIN RP QMRYDDGFKLFVG LSPQYVDTTMA TTFNK+LD L+DRV+QAV+DDLRS+REECLGMGYGGAFLGAQLDLTTVA EEYITF VSYVKKG+TDV+RV+LATRAFPGSHTA+DIKPWIEALTLEYF DL+G SV+  DVFL FTVDQGKN+VNACT LGVPVVECNCHRVNSAVLWALGIAGSATTCKNK M    KKLAALVGVFSHSAVNNDMLKE+QRLEADLHR+YE IRRNDTRWTSQ +MM RLLILKK I+EYFRRLAQQN
Sbjct:    1 MLKFVAPKMLQKQREFVDLRYVIWCCINPRPMQMRYDDGFKLFVGALSPQYVDTTMASTTFNKLLDTLHDRVEQAVVDDLRSVREECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYFTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSATTCKNKPM----KKLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQN 295          
BLAST of mRNA_P-littoralis_Contig887.21.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE)

HSP 1 Score: 504 bits (1299), Expect = 1.240e-166
Identity = 249/299 (83.28%), Postives = 273/299 (91.30%), Query Frame = 1
Query:  907 LLEYMSRKMDKKQREVADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMAPTTFNKVLDALYDRVKQAVLDDLRSLREECLGMGYGGAFLGAQLDLTTVANEEYITFTVSYVKKGNTDVTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWTSQFRMMARLLILKKAINEYFRRLAQQN 1803
            +L++++ K+ +KQRE ADLRY+IWCCINLRP QMRYDDGFKLFVG LSPQYVDTTMA TTFNK+LD L+DR+KQAV+DDLRS+REECLGMGYGGAFLGAQLDLTTVA EEYITF VSYVKKG+TDV+RV+LATRAFPGSHTA+DIKPWIEALTLEY  DL+G SV+  DVFL FTVDQGKN+VNACT LGVPVVECNCHRVNSAVLWALGIAGS TTCKNK M    KKLAALVGVFSHSAVNNDMLKE+QRLEADLHR+YE IRRNDTRWTSQ +MM RLLILKK I+EYFRRLAQQN
Sbjct:    1 MLKFVAPKVLQKQREFADLRYMIWCCINLRPMQMRYDDGFKLFVGALSPQYVDTTMAATTFNKLLDTLHDRMKQAVVDDLRSVREECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYLTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSVTTCKNKPM----KKLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQN 295          
BLAST of mRNA_P-littoralis_Contig887.21.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE)

HSP 1 Score: 415 bits (1067), Expect = 7.080e-132
Identity = 202/289 (69.90%), Postives = 239/289 (82.70%), Query Frame = 1
Query:  931 MDKKQREVADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMAPTTFNKVLDALYDRVKQAVLDDLRSLREECLGMGYGGAFLGAQLDLTTVANEEYITFTVSYVKKGNTDVTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWTSQFRMMARLLILKKAINEYFRRLAQ 1797
            M K +++ AD R+V+WCCI+LRP+Q+R+D GFKLF+G LSP+YV TTMA +TFN+ LD LY  V  +V+ +LR+LREE LGMGY G FLGAQLDLTT A EEYITFTV++VKKG+TD+TR+ALA RAFPGSHTAEDI+PWIE LTLEYF   +G SVQP DVFL FTVDQGKNI+NACT LGV VVECNCHR+N+AV+WALGIAG      N  MG LMKKLAA+VGVFSHSAVNND LKE+QRLE    R+YEL+R NDTRWTSQF+MM R+L LKK I+EYF++  Q
Sbjct:    5 MTKARKDAADRRFVLWCCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRPNDTRWTSQFKMMDRVLALKKPISEYFKKYPQ 291          
BLAST of mRNA_P-littoralis_Contig887.21.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE)

HSP 1 Score: 417 bits (1072), Expect = 2.100e-130
Identity = 239/484 (49.38%), Postives = 301/484 (62.19%), Query Frame = 1
Query:  430 DANESAVNTSDQPVADSDSH-PELQPPAETVATISPGGGKQSIQVTLEPPQEGKRKLTAWVWRFVSRFSPTINDKNVVCLVKGPEGKICGHLLKWSSSTTQAQRGSGTTGLAKHLEKFHPAVVKGAKEETGTKEERKAPIRAAVA----------GRESPEASGGTPQSSLLEYMS--RKMDKKQREVADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMAPTTFNKVLDALYDRVKQAVLDDLRSLREECLGMGYGGAFLGAQLDLTTVANEEYITFTVSYVKKGNTDVTRVALATRAFPGSHTAEDIKPWIEA--------LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWTSQFRMMARLLILKKAINEYFRRLAQQNPSTSS 1818
            DA+ S    S  PVAD     P+L   AET +T+    G Q + VT+ P   GK+   +WVW+    F P IN KNV C+        C HL+ W  +        GT G++ H +K HPA+ K   ++  T  + +A + AAVA          G+   +A   TP  S+ +YM     +       A+ R+V+WC IN+RPQ MRYDDG+KL +G+L P+YV++TM+  TFN +L  +Y     AV   LR  RE C+ +GY G FLGAQLDLTTVANEEYITF+VSY+ +  T +TRV LATRAFPGSHTA DI+PWIE         LT E+F D++G +VQP DVFL FTVDQG N+VNAC  L V V++CN HR+NS  +WALGI GS  T +N  M  LMK+LAA+VGVFSHSAVNND LK+IQRL+ +   +YELIRRNDTRW SQ  MM RLL LKKAI EYFR     N   SS
Sbjct:   18 DADSSIGGGSAAPVADDGRVVPQLDGAAET-STLHSNNGTQVV-VTIVPQTSGKKTKRSWVWQVCREFKPLINGKNVFCMA-------CKHLMLWKPA-------DGTGGMSSHYKKKHPALYKALMDDHTTTAQGRANVAAAVAFDPKPTGKATGKGKGKAGSSTP--SIKDYMQTGNPLLASTEAAANRRFVVWCAINMRPQNMRYDDGYKLHMGMLCPKYVESTMSDATFNSILSTIYTETCDAVKTGLRLHRESCVKLGYVGPFLGAQLDLTTVANEEYITFSVSYIAEAATTITRVGLATRAFPGSHTAADIEPWIEKASFTTFKLLTTEFFADMMGENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSS 483          
BLAST of mRNA_P-littoralis_Contig887.21.1 vs. uniprot
Match: A0A6H5KVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVP4_9PHAE)

HSP 1 Score: 323 bits (829), Expect = 2.800e-91
Identity = 168/304 (55.26%), Postives = 215/304 (70.72%), Query Frame = 1
Query:  490 PELQPPAETVATISPGGGKQSIQVTLEPPQEGKRKLTAWVWRFVSRFSPTINDKNVVCLVKGPEGKICGHLLKWSSSTTQAQRGSGTTGLAKHLEKFHPAVVKGAKEETGTKEERKAPIRAAVA----------GRESPEAS-----GGTPQSSLLEYMSRKMDKKQREVADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMAPTTFNKVLDALYDRVKQAVLDDLRSLREECLGMGYGGAFLGAQLDLTTVANEEYITFTVSYVKKGNTDVTRVALATRAFPGSHTAEDIKPWIE 1356
            P LQ P E+ A+I  G GK +++VTLE P EGKR+LT+W W F SRFSP+IN KNVVCLVK  +G  CG L+KW  +    ++G+GT+G++KHLE  H + V   K + G  E+  API AA+            +ES +            SSL+ YM   M K +++ AD R+V+WCCI+LRP+Q+R+D GFKLF+G LSP+YV TTMA +TFN+ LD LY  V  +V+ +LR+LREE LGMGY G FLGAQLDLTT A EEYITFTV++VKKG+TD+TR+ALA RAFPGSHTAEDI+PWIE
Sbjct: 1124 PVLQVPPESEASIDVGKGK-TVKVTLEEPMEGKRRLTSWTWNFASRFSPSINGKNVVCLVKKADGTPCGRLMKWEGAAL-GKKGTGTSGISKHLEICHKSEVDKHKAKVGASEDNTAPIVAALGEFFFFCPRLKNKESRDGRVYRLYSAPSSSSLMNYMVPTMTKARKDAADRRFVLWCCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIE 1425          
BLAST of mRNA_P-littoralis_Contig887.21.1 vs. uniprot
Match: A0A6H5KFJ9_9PHAE (Fanconi-associated nuclease n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ9_9PHAE)

HSP 1 Score: 315 bits (807), Expect = 2.180e-90
Identity = 165/267 (61.80%), Postives = 203/267 (76.03%), Query Frame = 1
Query:  625 RFSPTINDKNVVCLVKGPEGKICGHLLKWSSSTTQAQRGSGTTGLAKHLEKFHPAVVKGAKEETGTKEERKAPIRAAVAGRESPEASGGTPQSSLLEY--MSRKMDKKQREVADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMAPTTFNKVLDALYDRVKQAVLDDLRSLREECLGMGYGGAFLGAQLDLTTVANEEYITFTVSYVKKGNTDVTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVF 1419
            RF+P+INDKNVVCLVK  +G  C HL+KW+ S +  QRG+GT+ L+KH+ K HPA  K  ++E GT  +RK PIRAA+      +    + +  L+    M  KMDKK+RE+ADLR+VIW CINLRPQQMR+DDGFKLF+G LSP YV++TM+  TF+K LD LY +V  +V+DDLR+LREECLGMGY GAFLGAQLDLTTVA EEYITFTVSYVKKG+TDVTRVALA RAFPG+HTA+DI+PWIE L    F   +  +VQ  D+F
Sbjct:  211 RFTPSINDKNVVCLVKKKDGTTCNHLMKWTPSESNKQRGTGTSWLSKHIAKAHPATAKTRRDE-GTPADRKEPIRAAIVHGRFIDRFIISKRVELIVAGDMVPKMDKKRREMADLRFVIWRCINLRPQQMRHDDGFKLFLGALSPDYVESTMSNDTFDKNLDTLYGKVNTSVVDDLRTLREECLGMGYSGAFLGAQLDLTTVAGEEYITFTVSYVKKGSTDVTRVALACRAFPGTHTADDIRPWIEELRC-LFLHCVQCAVQDDDIF 475          
BLAST of mRNA_P-littoralis_Contig887.21.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 1.090e-61
Identity = 124/175 (70.86%), Postives = 139/175 (79.43%), Query Frame = 3
Query: 1794 PAEPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMDMLKDDSHPIRVENAVVTPPPQAPGLIPTEEEEQQHQTSLAEVSTEDTQVTDLTQEAQDVVQVMLEVLEEKGVGKALQRVERMSVLLDPRRKGCDADQVGNGSEALRAQAEADLKAFI 2318
            P  P +KQLKRKL++HEW VTNEVCSLL  VSE TIR+QGA DTHISQA F++HEVM+MLKD++HPIR  NA+VTPPP A  +IPTEEEE Q Q     VSTED  V DLT EAQ V +V+LEV+EEKGVGKALQRVER+S LLDPRRK  DA QVGNG E LR  AEADLK FI
Sbjct:  147 PQIPSNKQLKRKLSSHEWIVTNEVCSLLGDVSEITIRIQGAQDTHISQAMFLIHEVMEMLKDETHPIRTANAIVTPPPPALDVIPTEEEENQPQ--KGGVSTEDIHVEDLTTEAQGVRKVLLEVMEEKGVGKALQRVERLSALLDPRRKDLDATQVGNGDEDLRIAAEADLKKFI 319          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig887.21.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5JRT6_9PHAE5.430e-20269.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXV5_9PHAE3.020e-18091.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGG8_9PHAE4.180e-17460.53Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ec... [more]
A0A6H5JQI6_9PHAE2.500e-16783.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZU3_9PHAE1.240e-16683.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTB8_9PHAE7.080e-13269.90Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KJ52_9PHAE2.100e-13049.38Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KVP4_9PHAE2.800e-9155.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFJ9_9PHAE2.180e-9061.80Fanconi-associated nuclease n=1 Tax=Ectocarpus sp.... [more]
A0A6H5KDJ6_9PHAE1.090e-6170.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig887contigP-littoralis_Contig887:89460..92972 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog400682.PAC_15709403
PFAMsDimer_Tnp_hAT,zf-BED
Model size2324
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons4
Evalue2.31e-11
EggNOG OGsKOG1121@1|root,KOG1121@2759|Eukaryota,39X45@33154|Opisthokonta,3BJIV@33208|Metazoa
Descriptionprotein dimerization activity
Cds size1569
COG categoryL
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig887.21.1prot_P-littoralis_Contig887.21.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig887 89712..92469 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791774.5195255-UTR-P-littoralis_Contig887:89459..897111680791774.5195255-UTR-P-littoralis_Contig887:89459..89711Pylaiella littoralis U1_48UTRP-littoralis_Contig887 89460..89711 +
1680791774.5808587-UTR-P-littoralis_Contig887:92469..929721680791774.5808587-UTR-P-littoralis_Contig887:92469..92972Pylaiella littoralis U1_48UTRP-littoralis_Contig887 92470..92972 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791774.5352879-CDS-P-littoralis_Contig887:89711..903181680791774.5352879-CDS-P-littoralis_Contig887:89711..90318Pylaiella littoralis U1_48CDSP-littoralis_Contig887 89712..90318 +
1680791774.5480642-CDS-P-littoralis_Contig887:90840..913401680791774.5480642-CDS-P-littoralis_Contig887:90840..91340Pylaiella littoralis U1_48CDSP-littoralis_Contig887 90841..91340 +
1680791774.5603013-CDS-P-littoralis_Contig887:91585..919411680791774.5603013-CDS-P-littoralis_Contig887:91585..91941Pylaiella littoralis U1_48CDSP-littoralis_Contig887 91586..91941 +
1680791774.5709667-CDS-P-littoralis_Contig887:92363..924691680791774.5709667-CDS-P-littoralis_Contig887:92363..92469Pylaiella littoralis U1_48CDSP-littoralis_Contig887 92364..92469 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig887.21.1

>prot_P-littoralis_Contig887.21.1 ID=prot_P-littoralis_Contig887.21.1|Name=mRNA_P-littoralis_Contig887.21.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=523bp
MCRQARRAACATRHTCPARRVRVVCLAMSASDPSVSATPSGEEAASADSS
TPAPGDASQDANESAVNTSDQPVADSDSHPELQPPAETVATISPGGGKQS
IQVTLEPPQEGKRKLTAWVWRFVSRFSPTINDKNVVCLVKGPEGKICGHL
LKWSSSTTQAQRGSGTTGLAKHLEKFHPAVVKGAKEETGTKEERKAPIRA
AVAGRESPEASGGTPQSSLLEYMSRKMDKKQREVADLRYVIWCCINLRPQ
QMRYDDGFKLFVGVLSPQYVDTTMAPTTFNKVLDALYDRVKQAVLDDLRS
LREECLGMGYGGAFLGAQLDLTTVANEEYITFTVSYVKKGNTDVTRVALA
TRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTVDQGKNI
VNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAA
LVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWTSQFRMMARLL
ILKKAINEYFRRLAQQNPSTSS*
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mRNA from alignment at P-littoralis_Contig887:89460..92972+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig887.21.1 ID=mRNA_P-littoralis_Contig887.21.1|Name=mRNA_P-littoralis_Contig887.21.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3513bp|location=Sequence derived from alignment at P-littoralis_Contig887:89460..92972+ (Pylaiella littoralis U1_48)
TAGTGCAGTACCGCCTAAATGGTACCGCCGTACGCTAATTCCGCCTGGGG TTATGTACCACTAGGGCTTTCCAAACGTATACAGCAGTACAGTATACACC CAATGGACTAGAGTTCGATCCTCACACCGCCTGTTTTTTTTTCTGTCTTC TTTTCTCTTTTCTTTTCCAGCCTTTTTCTTTTTCTTTTTTCTTTTTTTCT TCGCGTTGGTTCTATATATCGCTAGTGCCTTTTGGGCGGAACCTCTGTCT GCATGTGCAGACAGGCGCGGCGTGCGGCGTGCGCCACACGCCACACCTGC CCAGCACGCAGAGTGCGCGTGGTCTGTCTAGCAATGAGCGCTTCAGACCC TAGTGTTAGTGCTACTCCCAGTGGTGAAGAGGCTGCGTCAGCCGATTCAT CCACGCCAGCTCCGGGCGACGCATCGCAGGATGCGAATGAGTCGGCGGTG AACACGAGCGATCAACCGGTGGCTGACAGTGATAGCCACCCGGAGTTGCA ACCACCAGCCGAGACTGTAGCCACGATCAGTCCCGGCGGAGGCAAGCAGA GCATCCAGGTCACACTCGAGCCTCCTCAAGAAGGGAAAAGGAAGTTGACG GCCTGGGTTTGGAGGTTTGTGAGTAGGTTTTCCCCGACCATCAACGATAA GAACGTGGTTTGCTTGGTGAAGGGGCCTGAGGGGAAGATCTGCGGCCATC TGCTGAAGTGGTCTTCATCAACCACGCAGGCCCAAAGAGGGTCGGGAACG ACTGGCTTAGCCAAGCACCTCGAAAAATTTCACCCGGCCGTGGTCAAGGG TGCGAAGGAGGAGACAGGCACCAAGGAGGAGAGGAAAGCACCAATTCGAG CGGCAGTTGGTGAGTCATATTACATTATTTAAGTATAATATTTATTATTT ATTATTTATCACTTCGTATTTATTATTTATTATGTATTGTATAGACTATT TACTACTCCGTATTCACTGTTTGTTTGTTTTGTTTTCTATTTTCTATTTT TGCAACTGATTTTGGGCCGAAAAGACGGAAAATGCTGTTGACTTGATTTT GTGATTTTGTATTGCCTTCCACAAAGCAACTGAAAATAATTATTAAAATT TACACATATTATTGTTGTTTCTATTGTCTCCCCCAAGAGAACACACATGT ACGTATGTATGTACGAAGTGTGGTTTCTTGTTTATGTCTATTGTCTCATT GTCTCCTACAAACGAAAAAATAATTTCATAAATTAAGTATTTTTTATTTT TCTCCCCAAACGAAAAAATAAAATAAAAAATAGTTGAATTAAATAAAAAC TATATGAAACTTAAGATTAAAGCTATTTTTTGTCTTTTTTGTTGTTTGTT TTTCTATTCTCTCTTGGTACCTTTACGGCAGCGGGGCGTGAATCGCCGGA GGCGTCAGGAGGAACACCTCAGTCGTCACTGCTAGAGTACATGTCACGGA AGATGGACAAGAAGCAAAGGGAGGTGGCCGACCTCCGCTACGTGATCTGG TGCTGCATCAACCTGCGGCCACAGCAGATGCGGTACGACGATGGCTTCAA GCTTTTCGTGGGTGTTTTGTCACCCCAGTACGTAGACACCACGATGGCCC CCACTACCTTCAACAAGGTATTGGACGCCCTGTACGATAGGGTGAAGCAA GCCGTTTTGGACGACTTGCGGTCGTTGCGCGAGGAGTGTCTGGGCATGGG GTATGGTGGAGCTTTCCTTGGTGCCCAGCTAGATCTCACGACTGTGGCCA ACGAGGAGTACATCACTTTCACCGTCTCGTACGTCAAGAAGGGAAACACG GATGTTACCCGTGTCGCGCTTGCGACGAGAGCGTTTCCCGGCAGCCACAC CGCCGAGGACATCAAACCCTGGATCGAAGCGGTGAGAAATACAATTTAAA ATTAGAATGATTTTTTTTGAACTTTTGTTTCTGTATCGGACTATCCTTTT CCAGCTGTCGGTGGACAACAACGAATGGAATATCAAACGAATACTATAAT ATTTTGATATTATGATAGTTTATATTTTGATGAAAACAGAGAAAACGTAA CACTAATATAAACATTTAATCTTGGGCTCTGTTACCTTCCTTCCGTTGTC GAACGACTGAATTAATAAATTAACAGCTCACGCTGGAGTACTTCAAGGAC TTGATCGGGCCGTCGGTCCAGCCCCACGACGTCTTCCTCGGGTTCACGGT GGATCAAGGAAAGAACATCGTGAACGCGTGTACGGGGTTGGGAGTTCCAG TCGTCGAGTGCAACTGTCACCGCGTCAATTCCGCCGTCCTGTGGGCCCTG GGTATTGCGGGTAGTGCGACGACTTGCAAGAACAAGCTGATGGGAGACCT GATGAAGAAGCTGGCAGCGTTGGTCGGCGTCTTCAGCCACTCCGCTGTCA ACAACGACATGCTGAAGGAAATCCAGCGGCTGGAGGCGGATCTTCATCGC GTCTACGAGCTCATCCGGCGAAACGACACCAGGTGTGTTGATGGGGAGGA TTTCTTATTTCTTAGGTTTGTTTTTCGTTGTTCAGCACTGAATCCTTTTT TTTTTATATTGTCTGCCCAAAACCAAAAAATTAAAAACCCCCAACCAACA ATAATTAAAATAACACTATTGTCTGCCCAAAACCaAAAAATTAAAAACCC CCAACCAACAATAATTAAAATAACACTGGCGAGTTTTTTTTTCTCCGGTC TTCAGGAAATCCTTTTGTACTGGTACTGTTTTTTTTTTTTACGGCCAGGT TTTCTGGCAACGTTGAATGAGTGCGTGCAATCAATTCTCAATTTCGTTGT TGAGTACAACTTGAACGTTTTTGTCTCAGGACAACCAAAATGCAAACGAA AAACACCAACACCAACGCGGACTCCTTCCCCCCACCCCTCCCCCCTCCCA ACAGGTGGACTAGCCAGTTCAGGATGATGGCTCGCCTTCTGATCTTGAAG AAGGCGATCAACGAGTACTTCCGCCGACTTGCCCAGCAGAACCCCAGCAC AAGCAGCTGAAACGCAAGTTGACTGCCCACGAGTGGACCGTCACCAACGA GGTGTGCAGCCTCCTGGACACCGTCTCCGAGGCCACGATCCGCATGCAAG GCGCCGCCGACACCCACATCAGCCAGGCGACGTTCATCGTTCACGAGGTG ATGGACATGTTGAAGGACGACTCTCACCCAATCCGTGTGGAGAACGCCGT GGTCACGCCGCCCCCACAGGCACCGGGCCTCATCCCCACCGAGGAGGAGG AGCAGCAGCACCAGACCTCTCTGGCCGAGGTCTCCACGGAGGACACCCAG GTGACTGACCTCACCCAAGAAGCGCAGGACGTGGTCCAAGTCATGCTGGA GGTGTTGGAAGAGAAGGGAGTGGGGAAGGCGCTGCAGAGGGTGGAGCGAA TGTCCGTGCTGCTGGACCCGAGGCGGAAAGGTTGCGACGCCGACCAAGTC GGGAACGGCTCTGAAGCCCTGAGGGCACAAGCCGAAGCGGACTTGAAGGC ATTCATCGGCCAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig887:89460..92972+

>mRNA_P-littoralis_Contig887.21.1 ID=mRNA_P-littoralis_Contig887.21.1|Name=mRNA_P-littoralis_Contig887.21.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1569bp|location=Sequence derived from alignment at P-littoralis_Contig887:89460..92972+ (Pylaiella littoralis U1_48)
ATGTGCAGACAGGCGCGGCGTGCGGCGTGCGCCACACGCCACACCTGCCC
AGCACGCAGAGTGCGCGTGGTCTGTCTAGCAATGAGCGCTTCAGACCCTA
GTGTTAGTGCTACTCCCAGTGGTGAAGAGGCTGCGTCAGCCGATTCATCC
ACGCCAGCTCCGGGCGACGCATCGCAGGATGCGAATGAGTCGGCGGTGAA
CACGAGCGATCAACCGGTGGCTGACAGTGATAGCCACCCGGAGTTGCAAC
CACCAGCCGAGACTGTAGCCACGATCAGTCCCGGCGGAGGCAAGCAGAGC
ATCCAGGTCACACTCGAGCCTCCTCAAGAAGGGAAAAGGAAGTTGACGGC
CTGGGTTTGGAGGTTTGTGAGTAGGTTTTCCCCGACCATCAACGATAAGA
ACGTGGTTTGCTTGGTGAAGGGGCCTGAGGGGAAGATCTGCGGCCATCTG
CTGAAGTGGTCTTCATCAACCACGCAGGCCCAAAGAGGGTCGGGAACGAC
TGGCTTAGCCAAGCACCTCGAAAAATTTCACCCGGCCGTGGTCAAGGGTG
CGAAGGAGGAGACAGGCACCAAGGAGGAGAGGAAAGCACCAATTCGAGCG
GCAGTTGCGGGGCGTGAATCGCCGGAGGCGTCAGGAGGAACACCTCAGTC
GTCACTGCTAGAGTACATGTCACGGAAGATGGACAAGAAGCAAAGGGAGG
TGGCCGACCTCCGCTACGTGATCTGGTGCTGCATCAACCTGCGGCCACAG
CAGATGCGGTACGACGATGGCTTCAAGCTTTTCGTGGGTGTTTTGTCACC
CCAGTACGTAGACACCACGATGGCCCCCACTACCTTCAACAAGGTATTGG
ACGCCCTGTACGATAGGGTGAAGCAAGCCGTTTTGGACGACTTGCGGTCG
TTGCGCGAGGAGTGTCTGGGCATGGGGTATGGTGGAGCTTTCCTTGGTGC
CCAGCTAGATCTCACGACTGTGGCCAACGAGGAGTACATCACTTTCACCG
TCTCGTACGTCAAGAAGGGAAACACGGATGTTACCCGTGTCGCGCTTGCG
ACGAGAGCGTTTCCCGGCAGCCACACCGCCGAGGACATCAAACCCTGGAT
CGAAGCGCTCACGCTGGAGTACTTCAAGGACTTGATCGGGCCGTCGGTCC
AGCCCCACGACGTCTTCCTCGGGTTCACGGTGGATCAAGGAAAGAACATC
GTGAACGCGTGTACGGGGTTGGGAGTTCCAGTCGTCGAGTGCAACTGTCA
CCGCGTCAATTCCGCCGTCCTGTGGGCCCTGGGTATTGCGGGTAGTGCGA
CGACTTGCAAGAACAAGCTGATGGGAGACCTGATGAAGAAGCTGGCAGCG
TTGGTCGGCGTCTTCAGCCACTCCGCTGTCAACAACGACATGCTGAAGGA
AATCCAGCGGCTGGAGGCGGATCTTCATCGCGTCTACGAGCTCATCCGGC
GAAACGACACCAGGTGGACTAGCCAGTTCAGGATGATGGCTCGCCTTCTG
ATCTTGAAGAAGGCGATCAACGAGTACTTCCGCCGACTTGCCCAGCAGAA
CCCCAGCACAAGCAGCTGA
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