prot_P-littoralis_Contig885.8.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig885.8.2
Unique Nameprot_P-littoralis_Contig885.8.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length337
Homology
BLAST of mRNA_P-littoralis_Contig885.8.2 vs. uniprot
Match: D7G1F1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1F1_ECTSI)

HSP 1 Score: 443 bits (1139), Expect = 7.530e-152
Identity = 224/286 (78.32%), Postives = 254/286 (88.81%), Query Frame = 0
Query:    1 MKVLVSTTKISSFVDARGEVAARSDWTVGRLKEELEEKFPGKIPASLQRLFKGTQLLPSGMTLEEASEGAEGPLSLLLDNAPPIDASTFDPDTAVPSRRDGQVEAFSACLAAQSTLQEALLAVMRGDSGQDDPELSRSVKMKADFENTQALLQRTLDEVPDAGDEEQESFGLFHEALRPLAHRFDVDWVQNAQRALFVFICARFGAAGSFRQVATLMLIPMIVVAQSRPARVAMKLARNLAAEVPVATHLFLGLLQAPEQVIMSTDTAAYTRHLYGPGGPKYDSAF 286
            M++LVSTTKISS++DARGEVAARSDWTVG+LKEELE+KFPG+IPASLQRLFKGTQLLPS MTLEEASEGAEGPLSLLLDNAPPIDAS FDPDTAVP  +DGQVEAFSACLAAQSTLQE LLAVMRG++ +DD ELSRSVKMKADFENT+ALLQRTLDEVPD   +E+E+FG+ HEALRPLAHR DV+W+Q AQ  +F +ICA+FGA G+ R++ATLMLIPM+++AQ+R ARV  K+ RNL AEVPV T LFLGLLQAP QVI+S D  AYTR LYGPGGPKYD  F
Sbjct:  150 MQILVSTTKISSYIDARGEVAARSDWTVGKLKEELEKKFPGRIPASLQRLFKGTQLLPSSMTLEEASEGAEGPLSLLLDNAPPIDASRFDPDTAVPFSKDGQVEAFSACLAAQSTLQETLLAVMRGENSEDDAELSRSVKMKADFENTKALLQRTLDEVPDKTGDEEETFGILHEALRPLAHRLDVNWMQTAQYTIFTYICAQFGATGTIRRLATLMLIPMMLLAQTRSARVGAKMVRNLVAEVPVLTQLFLGLLQAPTQVIISVDPKAYTRGLYGPGGPKYDKEF 435          
BLAST of mRNA_P-littoralis_Contig885.8.2 vs. uniprot
Match: A0A836CA69_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA69_9STRA)

HSP 1 Score: 181 bits (460), Expect = 7.410e-51
Identity = 112/299 (37.46%), Postives = 160/299 (53.51%), Query Frame = 0
Query:    3 VLVSTTKISSFVDARGEVAARSDWTVGRLKEELEEKFPGKIPASLQRLFKGTQLLPSGMTLEEASEGAEGPLSLLLDNAPPIDASTFDPDTAVPSRRDGQVEAFSACLAAQSTLQEALLAVMRGDSGQDDPELSRS-----VKMKADFENTQALLQRTLDEVPDAGDEEQES----------FGLFHEALRPLAHRFDVDWVQNAQRALFVFICARFGAAGSFRQVATLMLIPMIVVAQSRPARVAMKLARNLAAEVPVATHLFLGLLQAPEQVIMSTDTAAYTRHLYGPGGPKYDSAF 286
            ++V+T K+S FVD R ++      TV +LK++L + FPGK P  +QR+F G  LL   M L E ++ A G + L+LD  PPID   FDP TAVPS RD Q+EA+ A +AA + LQ      + GD       L+ S     ++M++     Q  LQ +    P  GD                G  HE LRP+A + DVDW  +   A FV +CA+FGA     +   L+ I +I VA+ RP +  +K+A N   ++P  T + + LL AP+QV++  D  AY + LYG  GPK+   F
Sbjct:   27 MVVTTLKLSGFVDQRCQLQLPGTATVRQLKDKLAQNFPGKPPVPVQRVFSGLTLLSDDMQLYEIAQSAPGRVQLVLDMPPPIDPEAFDPATAVPSNRDSQLEAYCANMAALTQLQSGARRALAGDKSPFSSPLAPSDMTCALEMQSHMSAVQGFLQGSY--APKEGDGGVRDGELPLPPLPPAGPLHEVLRPVAMQLDVDWKNSLMMAFFVALCAKFGAFSPTLRAMRLLGIALIFVAKLRPVKYGIKVAYNKLRDLPFITDIIVALLPAPDQVLLQFDEKAYVQKLYGDAGPKFRPEF 323          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig885.8.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1F1_ECTSI7.530e-15278.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CA69_9STRA7.410e-5137.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 2..82
e-value: 1.2E-5
score: 27.0
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 21..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig885contigP-littoralis_Contig885:34792..47317 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig885.8.2mRNA_P-littoralis_Contig885.8.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig885 33700..47737 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig885.8.2 ID=prot_P-littoralis_Contig885.8.2|Name=mRNA_P-littoralis_Contig885.8.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=337bp
MKVLVSTTKISSFVDARGEVAARSDWTVGRLKEELEEKFPGKIPASLQRL
FKGTQLLPSGMTLEEASEGAEGPLSLLLDNAPPIDASTFDPDTAVPSRRD
GQVEAFSACLAAQSTLQEALLAVMRGDSGQDDPELSRSVKMKADFENTQA
LLQRTLDEVPDAGDEEQESFGLFHEALRPLAHRFDVDWVQNAQRALFVFI
CARFGAAGSFRQVATLMLIPMIVVAQSRPARVAMKLARNLAAEVPVATHL
FLGLLQAPEQVIMSTDTAAYTRHLYGPGGPKYDSAFWRRRTGTGKRRKGL
ESWVVRKTPAFVLTDCLERVDLIVMSSAVCVVSNQD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-like_domsf