mRNA_P-littoralis_Contig88.67.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig88.67.2 vs. uniprot
Match: D8LR20_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR20_ECTSI) HSP 1 Score: 340 bits (873), Expect = 3.140e-100 Identity = 283/364 (77.75%), Postives = 292/364 (80.22%), Query Frame = 1
Query: 439 MADSGTERAMPSAEDMPRLGPTWSRGGGMFKPPKRPEGHAEGEDGVGTGAPSPGGGVGASGRGPTLASSASVDPSPRKAPPVFGHAARGGLEALASATVQRGFAPRDGSGGLSGGTAAVDAGASGGVGGVRIAAGPPXXXXXXXXXXPGLGASSSRWERDRERAASIDKRKVQRFSPQELLGLRRAPTRPLGKMPVLGSDISVIVSEEPLEPVTATPADDEAISKASRIWAAAAERQPMRGRRSRWPGGEEGPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVDRSHTQXXXXXXXXXXXXXXXXXXXXXXXXXXPTDSAGGLHGVEAGMDLLAMSQAADKFQEQMDSMARRMEGVELHEQ 1530
MADSGTERAM + EDMPRLGPTWSRGGGMFKPPKRPEGH EGE+GVGT RG TLASSA DP RKAPPVFGHAARGGLEALASAT QRGFAPRDGSGGLSGGTAAV+ +GGVGGVRIAAGP XXXXXXX GLG RWER ERAASIDKRKVQRFSP+ELL LRRAPTRPLGKMPVLG DIS+IVSEEPLEPVTATPAD EAIS RIWAAAAERQPMRGRRSRW XXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX D +GGLHGVE GMDLL+M+Q ADKFQEQMDSM RRMEGVELHEQ
Sbjct: 1 MADSGTERAM-APEDMPRLGPTWSRGGGMFKPPKRPEGHVEGEEGVGTXXXXXXXXXXXX-RGSTLASSA-ADPPSRKAPPVFGHAARGGLEALASATTQRGFAPRDGSGGLSGGTAAVE---TGGVGGVRIAAGPXXXXXXXX----GLGPPG-RWER--ERAASIDKRKVQRFSPEELLALRRAPTRPLGKMPVLGGDISIIVSEEPLEPVTATPADQEAIS---RIWAAAAERQPMRGRRSRW--------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAADGSGGLHGVE-GMDLLSMAQKADKFQEQMDSMKRRMEGVELHEQ 333
BLAST of mRNA_P-littoralis_Contig88.67.2 vs. uniprot
Match: A0A6H5KUY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY1_9PHAE) HSP 1 Score: 276 bits (707), Expect = 1.070e-80 Identity = 186/264 (70.45%), Postives = 193/264 (73.11%), Query Frame = 1
Query: 439 MADSGTERAMPSAEDMPRLGPTWSRGGGMFKPPKRPEGHAEG---------------------------------------EDGVGTGAPSPGGGVGASGRGPTLASSASVDPSPRKAPPVFGHAARGGLEALASATVQRGFAPRDGSGGLSGGTAAVDAGASGGVGGVRIAAGPPXXXXXXXXXXPGLGASSSRWERDRERAASIDKRKVQRFSPQELLGLRRAPTRPLGKMPVLGSDISVIVSEEPLEPVTATPADDEAISK 1113
MADSGTERAM + EDMPRLGPTWSRGGGMFKPPKRPEGH EG E+GVGTG PSPG G G GR TLASSA DP RKAPPVFGHAARGGLEALASAT QRGFAPRDGSGGLSGGTAAV+ +GGVGGVRIAAGP XXXXXXX GLG RW DRERAASIDKRKVQRFSP+ELL LRRAPTRPLGKMPVLG DIS+IVSEEPLEPVTATPAD EAIS+
Sbjct: 1 MADSGTERAM-APEDMPRLGPTWSRGGGMFKPPKRPEGHLEGVGHRTTLGEDWRVLGIGVSLNCWGVFRDKGLLLFAARDQEEGVGTGVPSPGTGAGG-GRASTLASSA-ADPPSRKAPPVFGHAARGGLEALASATTQRGFAPRDGSGGLSGGTAAVE---TGGVGGVRIAAGPXXXXXXXX----GLGPPG-RW--DRERAASIDKRKVQRFSPEELLALRRAPTRPLGKMPVLGGDISIIVSEEPLEPVTATPADQEAISR 251
BLAST of mRNA_P-littoralis_Contig88.67.2 vs. uniprot
Match: A0A6H5L9W7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9W7_9PHAE) HSP 1 Score: 214 bits (545), Expect = 1.820e-54 Identity = 289/479 (60.33%), Postives = 292/479 (60.96%), Query Frame = 1
Query: 4180 SRAPAADPTRPPSPLVGPTGEPLEKPAAEKPQPVPLAAAASAIPAGLNQKARKAYEKKMKQEAXXXXXXXXXXXXXXXXXXXXXXXXXXXGPKKSLAEIQAEEGKRQAQNA-LRTPAQTSALAEEHSRLREAXXXXXXXXXXXXXXXXVPWGKGPLGXXXXXXXNKPAMSLLEIQQQEARLAKLQQQQGDLGAASVFRPLKPSDTQTQTHISHDVMSCGANSNAGWAARLGGGQAPPGASSAAARVQPXXXXXXXXXXANWQQMRAQAPTVNGAPAAVPAAASRTGAAGQRGRGGQDDGFWETPARSSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAFGGSGMSPAMASWASQQLKKMHGKDDLTLLEFCMSLTDASEIRQYLAAYLGSTPEVSLFATEFLQRKQQGHGXXXXXXXXXXXXXXXXXX-------SVKPVPVAQ-VGDGWASAGKKGKKGKKH 5589
SRAPAADPTRPPSPLVGPTGEPLEKPAAEKPQPVPL AAASAIPAGLNQKARKAYEKK+KQEA XXXXXXXXXXXXXX PKKSLAEIQAEEGKRQAQ A L TPAQ +LAEEH XXXXXXXXXXXXXXXX XXXXXXX XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAFGGSGMSPAMASWASQQLKKM GKDDLTLLEFCMSLTDASEIRQYLAAYLGSTPEVS FATEFLQRKQQG GXXXXXXXXXXXXXXX SVKPV V+Q VGDGWASAGKKGKKGKKH
Sbjct: 255 SRAPAADPTRPPSPLVGPTGEPLEKPAAEKPQPVPLVAAASAIPAGLNQKARKAYEKKLKQEAAKXXXXXXXXXXXXXXAWGSNAVATV--PKKSLAEIQAEEGKRQAQEAALHTPAQAQSLAEEHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------XXXXXXXXXXXXXXXXXXXXX-------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAFGGSGMSPAMASWASQQLKKMSGKDDLTLLEFCMSLTDASEIRQYLAAYLGSTPEVSSFATEFLQRKQQGRGXXXXXXXXXXXXXXXLVGGFGGASVSVKPVAVSQPVGDGWASAGKKGKKGKKH 677
BLAST of mRNA_P-littoralis_Contig88.67.2 vs. uniprot
Match: A0A835ZDV0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDV0_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 2.380e-19 Identity = 45/64 (70.31%), Postives = 54/64 (84.38%), Query Frame = 1
Query: 5251 GMSPAMASWASQQLKKMHGKDDLTLLEFCMSLTDASEIRQYLAAYLGSTPEVSLFATEFLQRKQ 5442
GM P MA+WA +LKK+ G +D+TLL+FCMS TDASE+R+ LAAYLGSTP+VS FAT FLQRKQ
Sbjct: 2 GMPPDMAAWAQAELKKLGGGEDITLLDFCMSSTDASEVREVLAAYLGSTPQVSSFATNFLQRKQ 65
BLAST of mRNA_P-littoralis_Contig88.67.2 vs. uniprot
Match: A0A7S2LIW4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LIW4_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 5.260e-16 Identity = 40/65 (61.54%), Postives = 53/65 (81.54%), Query Frame = 1
Query: 5239 FGGSG-MSPAMASWASQQLKKMHGKDDLTLLEFCMSLTDASEIRQYLAAYLGSTPEVSLFATEFL 5430
FG +G M+P M W Q++K++G DDLTL+ FCM+LTD+ EIRQYL+AYLGSTP+V+ FATEF+
Sbjct: 102 FGANGQMTPTMEKWCKDQMQKLNGSDDLTLVTFCMTLTDSDEIRQYLSAYLGSTPQVNNFATEFI 166
BLAST of mRNA_P-littoralis_Contig88.67.2 vs. uniprot
Match: A0A8K1C681_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C681_PYTOL) HSP 1 Score: 94.7 bits (234), Expect = 1.400e-15 Identity = 44/72 (61.11%), Postives = 56/72 (77.78%), Query Frame = 1
Query: 5239 FGGSGMSPAMASWASQQLKKMHGKDDLTLLEFCMSLTDASEIRQYLAAYLGSTPEVSLFATEFLQRKQQGHG 5454
FGGS +S SW ++QLK ++G DDLTL+E+C +L D EIR+YLAAYLGSTP+VS FATEF+QRK+ G
Sbjct: 927 FGGSSVSSDFMSWCAKQLKSINGSDDLTLVEYCATLEDPGEIREYLAAYLGSTPKVSAFATEFIQRKKSAPG 998
BLAST of mRNA_P-littoralis_Contig88.67.2 vs. uniprot
Match: A0A7S1CZA9_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZA9_CYCTE) HSP 1 Score: 90.5 bits (223), Expect = 1.450e-15 Identity = 41/68 (60.29%), Postives = 53/68 (77.94%), Query Frame = 1
Query: 5245 GSGMSPAMASWASQQLKKMHGKDDLTLLEFCMSLTDASEIRQYLAAYLGSTPEVSLFATEFLQRKQQG 5448
G+ MSPA+ SW +Q+ K++G DDLTL+ FCM+LTD EIRQYL AYLGSTP+V FATEF+ ++ G
Sbjct: 225 GTTMSPALESWCKEQMTKLNGSDDLTLVAFCMTLTDPVEIRQYLTAYLGSTPQVGNFATEFISKRGLG 292
BLAST of mRNA_P-littoralis_Contig88.67.2 vs. uniprot
Match: A0A5D6Y3L8_9STRA (GYF domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3L8_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 3.670e-15 Identity = 45/72 (62.50%), Postives = 59/72 (81.94%), Query Frame = 1
Query: 5236 AFGGS-GMSPAMASWASQQLKKMHGKDDLTLLEFCMSLTDASEIRQYLAAYLGSTPEVSLFATEFLQRKQQG 5448
AFGGS G+S +WA++Q + + G+DDLTL+E+C+SL D EIR+YLAAYLGSTP VS FATEF+QRK++G
Sbjct: 761 AFGGSAGVSSEFMAWAAKQYQLISGRDDLTLVEYCVSLEDPGEIREYLAAYLGSTPRVSAFATEFIQRKKKG 832
BLAST of mRNA_P-littoralis_Contig88.67.2 vs. uniprot
Match: A0A7S2EIP2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EIP2_TRICV) HSP 1 Score: 85.5 bits (210), Expect = 3.810e-15 Identity = 39/68 (57.35%), Postives = 53/68 (77.94%), Query Frame = 1
Query: 5239 FGGSG-MSPAMASWASQQLKKMHGKDDLTLLEFCMSLTDASEIRQYLAAYLGSTPEVSLFATEFLQRK 5439
FG G MSPA+ +W +Q++K+ G +DLTL+ FCM+L+D EIRQYL AYLG+TP+V+ FA EF+ RK
Sbjct: 79 FGAGGKMSPALENWCKEQMRKISGSEDLTLVSFCMTLSDPVEIRQYLTAYLGTTPQVNNFAAEFINRK 146
BLAST of mRNA_P-littoralis_Contig88.67.2 vs. uniprot
Match: A0A7S1H1V4_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H1V4_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 4.660e-15 Identity = 37/69 (53.62%), Postives = 53/69 (76.81%), Query Frame = 1
Query: 5245 GSGMSPAMASWASQQLKKMHGKDDLTLLEFCMSLTDASEIRQYLAAYLGSTPEVSLFATEFLQRKQQGH 5451
G+ MS + SW Q++K++G DDLTL+ FCM+L D +EI+QYL AYLGSTP+V+ FATEF+ ++ G+
Sbjct: 116 GASMSTTLESWCKDQMRKLNGSDDLTLVSFCMTLNDPAEIKQYLTAYLGSTPQVNNFATEFINKRGLGN 184 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig88.67.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig88.67.2 >prot_P-littoralis_Contig88.67.2 ID=prot_P-littoralis_Contig88.67.2|Name=mRNA_P-littoralis_Contig88.67.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1718bp MADSGTERAMPSAEDMPRLGPTWSRGGGMFKPPKRPEGHAEGEDGVGTGAback to top mRNA from alignment at P-littoralis_Contig88:301616..325249- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig88.67.2 ID=mRNA_P-littoralis_Contig88.67.2|Name=mRNA_P-littoralis_Contig88.67.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=23634bp|location=Sequence derived from alignment at P-littoralis_Contig88:301616..325249- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig88:301616..325249- >mRNA_P-littoralis_Contig88.67.2 ID=mRNA_P-littoralis_Contig88.67.2|Name=mRNA_P-littoralis_Contig88.67.2|organism=Pylaiella littoralis U1_48|type=CDS|length=5154bp|location=Sequence derived from alignment at P-littoralis_Contig88:301616..325249- (Pylaiella littoralis U1_48)back to top |