mRNA_P-littoralis_Contig872.1.2 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig872.1.2 vs. uniprot
Match: D8LNW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNW9_ECTSI) HSP 1 Score: 716 bits (1848), Expect = 8.350e-245 Identity = 479/671 (71.39%), Postives = 513/671 (76.45%), Query Frame = 1
Query: 70 RDINPFGQPVSPELKGADDGGVDFNSSLEPPRPSTPXXXXXVPVKAAPGSPAPGSPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSP-----------GESGRRRALDDTRLFEQKRHTHFGEKYDGDSLYWKCFVELIRRSQANNRRAISYATQKLAATHAYARSLYAIRDSVDGLEAGTTEGLREKERKKRNHKEWPPKQRSLPQSQT--SGKDESARPQQTPSALDCLFEMEEYTAMRTIDMCHEAHVSVIDKQLNAMVKKLDDRFAEMVGQGTACLRLMHSAEANSALAYARFRKVVTASLERKTATTGVLAALKSRGKSFADVTGSDVWLADMNYRVAVTQQSRVWKGVSAKLGDLFGRMKDIEVERRMAIQSGLTALVQLQDNLFRDLAVLNNPVHKTLERINVDRHLLDQEVRQQMRVGAARLLAGRQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDPSDPSSSPDFLKDLESPLASPLIARSTMLERREKLMISSRWVLVLAILTHDSYLLLFDVPKGCAAHKKQLNARTTEAFAELVPKPEVGALAVELGKHKNGKGVDSGGWPVPPSVAIDLSACEVVFKPDSKSDALFEITEMKPTKGVKTVFKDFEETKFLLRGRSQEAMVDWVCEIKEMGRVGMKAVSDNGKGKK 2043
RDINPFGQP +PE K ++ VD N+SLEPPRPST XXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G +G+R+ALD+TR+FEQ+RH+HFGEKYDGD RD VD LE GTTE LREKER+K NHKEWPP+Q LP Q SG D P Q SALDCLFEMEEYTAMRTIDMC EAHV+VIDKQLNAMVKKLDDRFAEMVGQGTACLRLMHSAE NSA AY R+++VVTASL R+ + A L R DV GSDVWLADMNYRVAVTQQ+RVWKGVSAKLGDLFGRMKDIEVERR AIQ GLTA+VQLQD L+RDL L PV TL+RINVDRHLLDQEVRQQMRVGAARLLAGRQE XXXXXXXXXXXXXX XXXXXXXXXXXX S + DFL LESPLAS LIARSTMLERREK MI+SRW+LVLAILTHDSYLLLFDVP+G AAHKKQLNART+EAFAELVPKPEVGA+AVELGKHK+GKGVDSGG PVPPSVAIDLSAC+V FKPD KSDA FEITE+KPT+GVKTVFKDFEETKF LRGRSQEAMVDWVCEIKEMGR GMKAVSD+GKGKK
Sbjct: 29 RDINPFGQPATPESKEGNE--VDLNASLEPPRPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGTTGKRKALDETRIFEQRRHSHFGEKYDGD------------------------------------------RDRVDSLEPGTTEALREKERRKNNHKEWPPQQLPLPPQQRRGSGTDGGGLPPQPASALDCLFEMEEYTAMRTIDMCQEAHVTVIDKQLNAMVKKLDDRFAEMVGQGTACLRLMHSAEMNSAKAYGRYQEVVTASLGREASPARATAPLTLR-----DVAGSDVWLADMNYRVAVTQQARVWKGVSAKLGDLFGRMKDIEVERRKAIQGGLTAMVQLQDALWRDLPALKEPVVHTLDRINVDRHLLDQEVRQQMRVGAARLLAGRQENGAGXXXXXXXXXXXXXXPAGXXXXXXXXXXXXGGGSVERSETMPADFLAGLESPLASSLIARSTMLERREKAMIASRWILVLAILTHDSYLLLFDVPRGTAAHKKQLNARTSEAFAELVPKPEVGAMAVELGKHKDGKGVDSGGLPVPPSVAIDLSACQVSFKPDGKSDATFEITEIKPTRGVKTVFKDFEETKFTLRGRSQEAMVDWVCEIKEMGRAGMKAVSDSGKGKK 650
BLAST of mRNA_P-littoralis_Contig872.1.2 vs. uniprot
Match: A0A6H5KEN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEN9_9PHAE) HSP 1 Score: 509 bits (1310), Expect = 4.120e-166 Identity = 371/530 (70.00%), Postives = 406/530 (76.60%), Query Frame = 1
Query: 1 MADSAGSVGEPPSSPQLPPPTPP-----RDINPFGQPVSPELKGADDGGVDFNSSLEPPRPSTPXXXXXVPVKAAPGSPAPGSPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------SPGESGRRRALDDTRLFEQKRHTHFGEKYDGDSLYWKCFVELIRRSQANNRRAISYATQKLAATHAYARSLYAIRDSVDGLEAGTTEGLREKERKKRNHKEWPPKQRSLPQSQT--SGKDESARPQQTPSALDCLFEMEEYTAMRTIDMCHEAHVSVIDKQLNAMVKKLDDRFAEMVGQGTACLRLMHSAEANSALAYARFRKVVTASLERKTATTGVLAALKSRGKSFADVTGSDVWLADMNYRVAVTQQSRVWKGVSAKLGDLFGRMKDIEVERRMAIQSGLTALVQLQDNLFRDLAVLNNPVHKTLERINVDRHLLDQEVRQQMRVGAARLLAGRQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDPSDPSSS--PDFLKDLESPLASPLI 1530
MAD PPS+PQ P RDINPFGQP +PE K ++ VD N+SLEPPRPSTPXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + G + +R+ALD+TR FEQ+RH+HFGEKYDGDSLYWKCFVELIRRSQANNRRAISYATQKL+ATHAYA+SLYAIRD VD LE GTTE LREKER+K NHK+WPP+Q LP Q SG D P Q SALDCLFEMEE+TAMRTIDMC EAHV+VID QLNAMVKKLD+RFAEMVGQGTACLRLMHSAE NS AY R++++VTASLER+ + A L R DV GSD+WLADMNYRVAVTQQ+RVWKGVSAKLGDLFG+MKDIEVERR AIQ GLTA+VQLQD L+RDL L +PV TL+RINVDRHLLDQEVRQQMRVGAARLLAGRQE XXXXXXXXXXXXXXXXXXXXXXXXXXXX + S + PDFL LESPLAS LI
Sbjct: 1 MADLDAFEQSPPSTPQQEPXXXXXXXXXRDINPFGQPATPESKEGNE--VDLNASLEPPRPSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLASGTTRKRKALDETRTFEQRRHSHFGEKYDGDSLYWKCFVELIRRSQANNRRAISYATQKLSATHAYAKSLYAIRDRVDSLEPGTTEALREKERRKNNHKKWPPQQLPLPPQQRRGSGTDAGGLPPQPASALDCLFEMEEWTAMRTIDMCQEAHVTVIDNQLNAMVKKLDERFAEMVGQGTACLRLMHSAEMNSVKAYGRYQEIVTASLEREASPARATAPLTLR-----DVAGSDIWLADMNYRVAVTQQARVWKGVSAKLGDLFGKMKDIEVERRKAIQGGLTAMVQLQDALWRDLPALKDPVLHTLDRINVDRHLLDQEVRQQMRVGAARLLAGRQENGASAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGGSVERSETIPPDFLAGLESPLASSLI 523
BLAST of mRNA_P-littoralis_Contig872.1.2 vs. uniprot
Match: A0A836CKX7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKX7_9STRA) HSP 1 Score: 208 bits (530), Expect = 4.630e-53 Identity = 143/361 (39.61%), Postives = 189/361 (52.35%), Query Frame = 1
Query: 382 FEQKRHTHFGEKYDGDSLYWKCFVELIRRSQANNRRAISYATQKLAATHAYARSLYAIRDSVDGLEAGTTEGLREKERKKRNHKEWPPKQRS--------------------------------------------LPQSQTSGKDESARPQQTPSALDCLFEMEEYTAMRTIDMCHEAHVSVIDKQLNAMVKKLDDRFAEMVGQGTACLRLMHSAEANSALAYARFRKVVTASLERKTATTGVLAALKSRGKSFADVTGSDVWLADMNYRVAVTQQSRVWKGVSAKLGDLFGRMKDIEVERRMAIQSGLTALVQLQDNLFRDLAVLNNPVHKTLERINVDRHLLDQEVRQQMR-VGAARL 1329
FE++R ++F + + LYW+ FVE+IRR+Q +N + ISY T KLAA AYA+ LY IRDSV G + GTT LRE+ER KE + R LP TS S RP PSAL+ +F+MEE +AM + C E V+ K L AM L +RF MV G ACL+++ EA++ K T + G +AA ++ + A SDVW+ DM YRVAVTQQ SA+LG LFG MKD+EV RR AI++ L +L+Q QD ++R L +L +PV + LERIN DR LD EVR MR + AA+L
Sbjct: 4 FEEQRSSYFSTLFQNNQLYWQSFVEIIRRNQTSNDKTISYLTAKLAAARAYAQLLYGIRDSVTGNKMGTTAALRERERAGAK-KEAAARGRGASVLSVLRVIMDGHNDSCMRLTACADAAMSSAAMRQASARASSQLPPRGTSEMGSSGRP---PSALEHMFDMEEKSAMMMLTFCDEMESDVLGKMLQAMATDLGERFTRMVATGDACLKVLSDNEASTV-------KATTLVGSLREPAPGSVAAAAAQEEGAAAAPRSDVWITDMAYRVAVTQQLAACDAASAQLGALFGHMKDLEVNRRTAIRNALLSLLQAQDLVWRQLPILKDPVLQVLERINTDRRFLDGEVRDAMRTLSAAKL 353
BLAST of mRNA_P-littoralis_Contig872.1.2 vs. uniprot
Match: A0A835YTK9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK9_9STRA) HSP 1 Score: 125 bits (313), Expect = 2.210e-25 Identity = 146/567 (25.75%), Postives = 238/567 (41.98%), Query Frame = 1
Query: 352 RRRALDDTRLFEQKRHTHFGEKYDGDSLYWKCFVELIRRSQANNRRAISYATQKLAATHAYARSLYAIRDSVDGLEAGTTE----------------GLREKERKKRNHKEWPPKQRSLPQSQTSGKDESARPQQTPSALDCLFEM-EEYTAMRTIDMCHEAHV---SVIDKQLNAMVKKLDDRFAEM---VGQGTACLRLMHSAEANSALAYARFRKVVTASLERKTATTGVLAALKSRGKSFADVTGSDVWLADMNYRVAVTQQSRVWKGVSAKLGDLFGRMKDIEVERRMAIQSGLTALVQLQDNLFRDLAVLNNPVHKTLERINVDRHLLDQEVRQQMRVGAARLLAGRQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDPSDPSSSPDFLKDLESPLASPLIARSTMLERREKLMISSRWVLVLAILTHDSYLLLFDVPKGCAAHKKQLNARTTEAFAELVPKPEVGALAVELGKHKNGKGVDSGGWPVPPSVAIDLSACEV---VFKPDSKSDALFEITEMKPTKGVKTVFKDFEETKFLLRGRSQEAMVDW 1974
+R +D R FE +R + F ++ + YW+ ++ R A +S+ +L+A AYA SL + DS+ G++ GT+ G E+E KK + P + S+ + G+ + P A D E+ +E AM + EAH ++ D + ++ DD AEM G CL M + E AY + L + + + +S A D+WLADMNYR+AV QQ + W G+++ + GR++D+E++RR + + + ++ Q L N V K L R++VD L++ +R++++ RQ P P F+ D P+ SPL+ ++ +L+R++K +SS+WV L +LT D+YL +FD+ G K A A L+P ++G +A L K V PS ++DLSA V + K + E+K G K FK + K LR S+ M W
Sbjct: 385 KRDEIDKVRAFEARRRSFFQAQHMCNGAYWQALKDVARDGGAAVNGVLSWYRLRLSAQRAYAASLLDMNDSIAGIKKGTSARAVAASTQRPGGSALIGEHERE-KKAPANQAPLRAASVKALRAPGR---SGPLGAAGAADGNGELLDELCAMDCVSAA-EAHALANALEDSACAQLQRRQDDISAEMRRACEDGDQCLSSMLAVEDYVLKAYEALHRAAADGLAQPVEYMDHPGSTSIKTQSAAP----DMWLADMNYRMAVQQQRQSWGGMTSVMACTLGRLRDLELDRRHSTKVVIEDTLRKQAEASGRLPTAANSVFKCLTRLDVDAATLEKTIRKELK---------RQPSVTAEPQVLNEDDTAHMG-----------------------PDGIPAFVDDFAGPMDSPLMIKAAVLQRKDKKNMSSKWVPALVVLTKDTYLHVFDL--GDTPVGKDPKA----AMNALLPPVDMGTVA-RLDKS----------LAVTPSQSLDLSAYIVGRRAKQTQPKHARQLHVIEIKQNTGFKKAFKKESQRKASLRAHSESEMGHW 893
BLAST of mRNA_P-littoralis_Contig872.1.2 vs. uniprot
Match: D7FN77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN77_ECTSI) HSP 1 Score: 121 bits (303), Expect = 1.710e-24 Identity = 113/452 (25.00%), Postives = 191/452 (42.26%), Query Frame = 1
Query: 382 FEQKRHTHFGEKYDGDSLYWKCFVELIRRSQANNRRAISYATQKLAATHAYARSLYAIRDSVDGLEAGTTEGLREKERKKRNHKEWPPKQRSLPQS-----QTSGKDESARPQQTPSALDCLFEMEEYT--AMRTID-MCHEAHVSVIDKQLNAMVKKLDDRFAEMVGQGTACLRLMHSAEANSALAYARFRKVVTASLERKTATTGVLAALKSRGKSFADVTGSDVWLADMNYRVAVTQQSRVWKGVSAKLGDLFGRMKDIEVERRMAIQSGLTALVQLQDNLFRDLAVLNNPVHKTLERINVDRHLLDQEVRQQMRVGAARLLAGRQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDPSDPSSSPD-FLKDLESPLASPLIARSTMLERREKLMISSRWVLVLAILTHDSYLLLFDVPKGCAAHKKQLNARTTEAFAELVP 1710
FE KR +F ++Y S+YW +++ + ++ +SY KL A +++ D V G + G T+ +K R H+E K + + S +G P T SA+ ++EM E A R D +C E + ++ M K++ RF E+ +GTACL + + + A+ ++ + + KT DVW +Y+ AV Q W V+AKLG++F +MKD+E ERR ++ + + + ++ + L+ P + + ++ R +DQEV L A R E +DP+ + D F++ L +PL SPL+ M+ERRE I S++ L +L+ D +L FD+P K +A + AF E+ P
Sbjct: 20 FESKRSGYFADEYRKSSMYWSSLCDVMSANDGPTQQVLSYVAGKLEADRINTAAIFVNADKVFGEKKGATKLRHDKIR----HEEQKAKTKGVTASIDVELLVAGGPGKEAP--TNSAVKAIWEMAEMDCRAARNRDALCDELEHEDMLGKVKVMGKEMQRRFKELSEEGTACLLSLANIDKRVGQAFLHLKETLGDQVGGKTL-------------------HEDVWFLFCSYQTAVVHQKEAWNAVTAKLGEVFAKMKDLEGERRTTLREFMLSANHAIGDNWKKMCTLSGPANDAAKAVDASRGAVDQEVHS--------LAAVRMEEKKHDSSKEHILANTTHIVR-------------------ADPAPADDSFIETLSAPLESPLVRSMMMIERREGKAIGSKYHAGLMVLSWDGFLHFFDIPSSSTVKK---DASASAAFQEISP 416
BLAST of mRNA_P-littoralis_Contig872.1.2 vs. uniprot
Match: A0A6H5L7U6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7U6_9PHAE) HSP 1 Score: 119 bits (297), Expect = 5.730e-24 Identity = 110/452 (24.34%), Postives = 194/452 (42.92%), Query Frame = 1
Query: 382 FEQKRHTHFGEKYDGDSLYWKCFVELIRRSQANNRRAISYATQKLAATHAYARSLYAIRDSVDGLEAGTTEGLREKERKKRNHKEWPPKQRSLPQS-----QTSGKDESARPQQTPSALDCLFEMEEYT--AMRTID-MCHEAHVSVIDKQLNAMVKKLDDRFAEMVGQGTACLRLMHSAEANSALAYARFRKVVTASLERKTATTGVLAALKSRGKSFADVTGSDVWLADMNYRVAVTQQSRVWKGVSAKLGDLFGRMKDIEVERRMAIQSGLTALVQLQDNLFRDLAVLNNPVHKTLERINVDRHLLDQEVRQQMRVGAARLLAGRQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDPSDPSSSPD-FLKDLESPLASPLIARSTMLERREKLMISSRWVLVLAILTHDSYLLLFDVPKGCAAHKKQLNARTTEAFAELVP 1710
FE KR +F ++Y S+YW +++ + ++ +SY KL A +++A D + + G T+ +K R H+E K + + S +G E P T +A+ ++EM E A R D +C E + ++ M K++ RF E+ +GTACL + + + A+ ++ + + KT DVW +Y+ AV Q W V+AKLG++F +MK++E ERR ++ + + + + ++ L L P ++ +R +DQEV + A R+ + E +DP+ + D F++ L +PL SPL+ + M+ERRE I S++ L +L+ D +L FD+P + +A + AF E+ P
Sbjct: 20 FESKRSGYFADEYRKSSMYWSSLCDVMSLNDGPTQQVLSYVAGKLEADRVNTAAIFANADKLFDEKKGATKLRHDKIR----HEEQKAKTKGVTASIDVELLVAGGPEKEAP--TNNAVKAIWEMAEMDCRAARNRDALCDELEHEDMLGKVKVMGKEMQRRFKELSEEGTACLLSLANIDKRVGQAFLHLKETLGDQVGGKTL-------------------HEDVWFLFCSYQTAVVHQKEAWDAVTAKLGEVFAKMKNLEGERRTTLREFMLSANRAIGDNWKTLCTLPGPASDAATAVDANRGAVDQEVHS---LAAVRMEEKKHETSKEHVLANTTHIVR------------------------ADPAPADDSFIETLSAPLESPLVRKMMMIERREGKAIGSKYYAGLMVLSWDGFLHFFDIPSSSTVKR---DASASAAFQEISP 416
BLAST of mRNA_P-littoralis_Contig872.1.2 vs. uniprot
Match: W7T3J3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T3J3_9STRA) HSP 1 Score: 117 bits (294), Expect = 2.050e-23 Identity = 131/555 (23.60%), Postives = 234/555 (42.16%), Query Frame = 1
Query: 382 FEQKRHTHFGEKYDGDSLYWKCFVELIRRSQANNRRAISYATQKLAATHAYARSL----YAIRDSVDGLEAGTTE------GLREKERKKRNHKE----WPPKQRSLPQSQTSGKDESARPQQTPSALDCLFEMEEYTAMRTIDMCHEAHVSVIDKQLNAMVKKLDDRFAEMVGQGTACLRLMHSAEANSALAYARFRKVVTASLERKTATTGVLAALKSRGKSFADVTGSDVWLADMNYRVAVTQQSRVWKGVSAKLGDLFGRMKDIEVERRMAIQSGLTALVQLQDNLFRDLAVLNNPVHKTLERIN-VDRHLLDQEVRQQMRVGAARLLAGRQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDPSDPSSSPDFLKDLESPLASPLIARSTMLERR-----EKLMISSRWVLVLAILTHDSYLLLFDVPKGCAAHKKQLNARTTEAFAELVPKPEVGALAVELGKHKNGKGVDSGGWPVPPSVAIDLSACEVVFKPDSKSDALFEITEMKPTKGVKTVFKDFEETKFLLRGRSQEAMVDWVCEI 1986
FE++R F + ++ +W+ F + +S N R +++ T+++ Y L Y G GT + G+ + + K ++ + T+ KD + + T A+D + + + D + ++D +L +V E++ +G L +++AE++ A+A + K +T + +G D+WL DM YRVAV Q +W+ L DLF RMK +EV RR + + + +Q Q + + L + ++ D H +++E+ ++++ A A ++E +P F+ +L +PL SPL+ R+ +LE R E L + RW LA+LT D++L +FD+P A L+ R EAF LVP+P G+ + GK V+ V PS + L ++P+ ++A F++TE + G +VFK E T+ +L+ R+QE M WV +
Sbjct: 25 FERQRLLLFTPQIRVNATHWEAFKSTLAKSSVENERVLAFFTKRIDMEEKYCEHLAELPYMDLTGTGGWRTGTKKCPPPGSGVAKASISSKPSKSSVGAGAVTSKTACATSTTTKDCNKSSEGTLPAMDTMMASTDTLVTKYSDYVRDTRRELVDGKLRNLVNSFKRTSDEVLEEGCLALENVNAAESHIVAAFAEYMKGAGNLTSYSKNSTTTSPHQQQQGTP-------DLWLLDMQYRVAVELQKTIWQETQHHLHDLFRRMKTLEVNRRSQLNALVLRFMQNQGSFWAQLPQAAAECSLAISTLSCTDPHQVEEELSEEIKTCAK--AAEQKEQHHSSGKENGAKGRDKDQRGVNVKAADDDAASGAAVPEP--------FVGNLMAPLDSPLVRRAEVLEHRRVTGVESLPLMKRWRPCLAVLTLDNFLHIFDMPSEVTAGTV-LSPR--EAFKLLVPRP-----INRRGRFRKGKDVER----VIPSHFLALPYSSARYRPEEGAEA-FDVTEARENTGFVSVFKAREVTRVVLKARTQEKMEAWVAIV 549
BLAST of mRNA_P-littoralis_Contig872.1.2 vs. uniprot
Match: A0A7S1TPW4_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPW4_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.920e-20 Identity = 134/586 (22.87%), Postives = 223/586 (38.05%), Query Frame = 1
Query: 376 RLFEQKRHTHFGEKYDGDSLYWKCFVELIRRSQANNRRAISYATQKLAATHAYARSLYAIRDSVDGLEAGTTEGLREKERKKRNHKEWPPKQRSLPQSQTSGKDESARPQQT---------------------PSALDCLFEMEEYTAMRTIDMCHEAHVSVIDKQLNAMVKKLDDRFAEMVGQGTACLRLMHSAEANSALAYARFRKVVTASLERKTATTGVLAALKSRG--KSFADVTGSD-------VWLADMNYRVAVTQQSRVWKGVSAKLGDLFGRMKDIEVERRMAIQSGLTALVQLQDNLFRDLAVLNNPVHKTLERINVDRHLLDQEVRQQMRVGAARLLAGRQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDPSDPSSSPDFLKDLESPLASPLIARSTMLERREKLMISSRWVLVLAILTHDSYLLLFDVPKGCAAHKKQLNARTTE-AFAELVPKPEVGALAVELGKHKNGKG------------VDSGGWPVPPSVAIDLSAC----EVVFKPDS-KSDALFEITEMKPTKGVKTVFKDFEETKFLLRGRSQEAMVDWVCEIK 1989
R+FE++R F E+++ + YW+ E++ S A N + ++ ++AA +A +L ++ V +E + E E R K+ KE K +S G DE Q + P + + + + + + + ++D +L + + A + G + +H AEA+ Y F V A+ + + GV + G + A TG+D +WL + YR AV W+ + LG LF K E RR IQ L N + L+ + +ER D +D E+ +M+V A S + + L L SPL+SP++ + +L+ +E I +W VLA+ T D L L+ +P N T E A ++PKP + K + VD P ++ D + C FKP S ++D FE+TE+ T GV++ + + K +LRG +Q MVDWV I+
Sbjct: 39 RVFEERRRRVFEERFNANETYWRALREILDDSLAENSKLLTILELQVAAEKEHAGALLSLPARVRMMETVSNEKKAEHIRVKQQKKEKANKAAKR-KSSMGGSDERRSRQASFGPASVVTEAKEESETQSDGGPRTVSAVMALAQQSGSQLLAYSESLKAGLVDTELTPAKDEFASKAAAITKTGALLIAALHKAEASVLQTYGAFLDV--ANEYERYGSQGVPGMPEGFGAARDLAAETGNDPVIEMQDLWLEEFRYRTAVGLLQMCWQQATGSLGALFTEAKAAEALRRTRIQESLRRYAGSIGNQYAGLSAPITALIGAVERQQTDPQGVDAEILAKMQVLVAE------------------------------------DPQRAAAESKSTNAEVNELLGSLNSPLSSPMVKKVAVLQLKEG-GILGKWTPVLAVATVDGMLHLWKIPSDICKKAATKNWPTVEEALPSVLPKPNLDVADDAKAKKLDSASAKVDEDVVDEHDVDEEVMPSASNIVADRTLCITNTVTDFKPSSARNDTTFELTELVSTHGVESFMRGSKNKKVVLRGPTQNDMVDWVVLIR 584
BLAST of mRNA_P-littoralis_Contig872.1.2 vs. uniprot
Match: W7T1H0_9STRA (Uncharacterized protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7T1H0_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 4.550e-17 Identity = 141/600 (23.50%), Postives = 240/600 (40.00%), Query Frame = 1
Query: 382 FEQKRHTHFGEKYDGDSLYWKCFVELIRRSQANNRRAISYATQKLAATHAYARSLYAIRDSVDGLEAGTTEGLREKERKKRNHKEWPPKQRSLPQSQTSGKDESARPQQTPSALDCLFEMEEYTAMRTIDMCHEAHVSVIDKQLNAMVKKLDDRFAEMVGQGTACLRLMHSAEANSALAYARFRKVVTASLERKTATTGVLAALKSRGKSFADVTGSDVWLADMNYRVAVTQQSRVWKGVSAKLGDLFGRMKDIEVERRMAIQSGLTALVQLQDNLFRDLAVLNNPVHKTLERINVDRHLLDQEVRQQMRVGAARLLAGRQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDPSDPSSSPDFLKD----------------------------LESPLASPLIARSTMLERREKLMISSRWVLVLAILTHDSYLLLFDVPKGCAAHKKQLNARTTEAFAE-----LVPKPE-----VGALAVELGKH------KNG--KGVDSGGWPVPPSVAIDLSACEVVFK-PDSKSDALFEITEMKP---TKGVKTVFKDFEETKFL-LRGRSQEAMVDWVCEI---KEMGRVGMKAV 2019
FE R +F K +++Y F E+++RS+A N + + + +K+AA + Y R + + + + L+ G HK P +R+ S P++ +ALD L ++E+ + ++I L M+ + ++ G L + AE + A+ ++R AL+ G S G D+W+ +M+YR+AV W+ S L +F RMKD E+ RR AI S L L + Q +R L L + ++ D L+++++ +R+GA RL + + S S F + L+ PL SPLI R+ + E++ + + + VLA++T DSYL +FD+P+ + + + A T A+ L+ +P+ VG + + + K G K +D V P + ++L+ CE K SK D EI E+ +KG K V + + + L+G +QE + DW I K M R G AV
Sbjct: 125 FEIARREYFDNKRGSNAIYLMAFTEILKRSKAENTQYLEFFNRKVAAENTYVRCILEMIEESEKLKHGGA------------HKS--PCERT-----------SVDPKK--NALDDLMAVQEHMVQQVHIFAKVIETNIIPV-LEEMITTFNASEESILQDGGTYLEDIDVAEDHVQQAFIQYRDQAQ--------------ALEKMGMS----EGQDLWIYEMHYRMAVVILLETWELSSTALTAMFARMKDTEMARRQAIHSALQTLNEEQTAYWRKLPHLGVTLSSLVQSHATDPRLIEKQIGADIRMGAKRLGLSEEGIHLKGQIMATRPLRVFTQASIQSANLGKTSSFNESTMEHRIKSGSGSFRCETEVVPNKKTAKANKNRRKKQAKKLFSQRLDGPLQSPLITRAQIFEQKSTNVFTCKRH-VLAVMTIDSYLHIFDLPQ-VSIRSQTVAANTASPAAQAALYGLIKRPDHVSRAVGHTSSVISSNAVFTSDKEGTLKTLDL----VSPRLTLNLAQCEAYVKGAASKKDTCLEIVEVGAGLGSKGFKKVLEGLAHRRVVVLKGNTQEELEDWCGVIDACKRMSRAGSPAV 672
BLAST of mRNA_P-littoralis_Contig872.1.2 vs. uniprot
Match: A0A1E7EVR8_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EVR8_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 5.340e-11 Identity = 118/502 (23.51%), Postives = 205/502 (40.84%), Query Frame = 1
Query: 376 RLFEQKRHTHFGEKYDGDSLYWKCFVELIRRSQANNRRAISYATQKLAATHAYARSLYAIRDSVDGLEAGTTEGLREKERKKRNHKEWPPKQRSLPQSQTSGKDESARPQQTPS--ALDCLFEMEEYTAMRTIDMCHEAHVSVIDKQLNAMVKKLDDRFAEMVGQ----GTACLRLMHSAEANSALAYARFRKVVTASLERKTATTGVLAALKSRGKSFADVTGSDVWLADMNYRVAVTQQSRVWKGVSAKLGDLFGRMKDIEVERRMAIQSGLTALVQLQDNLFRDLAVLNNPVHKTLERINVDRHLLDQEVR----------QQMRVGAARLLAGRQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDPSDPSSSPDFLKDLESPLASPLIARSTMLERREKLMISSRWVLVLAILTHDSYLLLFDVPKGCAAHKKQLNARTTEAFAELVPKPEVGALAVE-LGKHKNGKGVDSGGWPVPPSVAIDLSACEV 1830
R +E +R + K+D SLYWK + +L+ S RA L THAY S+YA +++ G+ T + K + K+ + LP+ G +++ + + T + A+ L E+ E A + + E H S D+++ ++ L D E G++ L + E +V A L ++ GV+ S + D W+ +M YRVAVT Q+ W + +L +LF ++K E+ RRM ++ L A Q Q LF L + V + L ++ R +++ V ++ VGA ++ A + DF +LESPL S L++++ ++ R+ + W L LA+++ DS+L +FD+ L + AF L P + + + LGK G+ P+ P+ ++ L C V
Sbjct: 38 RAYETRRRLAYASKFDSISLYWKSYCDLLSASLKETSRAQRIV---LGTTHAY--SMYA--ENMRGIYEDTFLDEKGNIAKDKQKKKKASVRNKLPEEILDGSNKNTQSKTTDAKGAVSVLKEIRE--AQNDLAVRFEEHSS--DEEIADLIGSLLDTTKESFDTIERLGSSILNELEKTENE-------VTQVWNAYLNSRS---GVVEG--STNEESVPKVVIDPWVVEMQYRVAVTYQNVAWDKGNGELSNLFIKVKQEEITRRMNLREFLVAFAQRQQRLFLSLPGIQTKVLEELAGKDLSRDEMEKAVHTIIEEHASRYKRTTVGADQVTACEDDFA--------------------------------------------DF--NLESPLTSDLLSKAKVVLRKAE---GGDWTLSLAVMSADSFLHMFDIESPSV----NLRTKAEVAFTLLAPTLVIPNVDNQMLGKSNFGRDWSE---PLTPTESMILGKCRV 460 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig872.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig872.1.2 >prot_P-littoralis_Contig872.1.2 ID=prot_P-littoralis_Contig872.1.2|Name=mRNA_P-littoralis_Contig872.1.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=682bp MADSAGSVGEPPSSPQLPPPTPPRDINPFGQPVSPELKGADDGGVDFNSSback to top mRNA from alignment at P-littoralis_Contig872:2757..15997- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig872.1.2 ID=mRNA_P-littoralis_Contig872.1.2|Name=mRNA_P-littoralis_Contig872.1.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=13241bp|location=Sequence derived from alignment at P-littoralis_Contig872:2757..15997- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig872:2757..15997- >mRNA_P-littoralis_Contig872.1.2 ID=mRNA_P-littoralis_Contig872.1.2|Name=mRNA_P-littoralis_Contig872.1.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2046bp|location=Sequence derived from alignment at P-littoralis_Contig872:2757..15997- (Pylaiella littoralis U1_48)back to top |