mRNA_P-littoralis_Contig87.157.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig87.157.1 vs. uniprot
Match: D7G918_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G918_ECTSI) HSP 1 Score: 556 bits (1433), Expect = 3.360e-184 Identity = 407/846 (48.11%), Postives = 490/846 (57.92%), Query Frame = 1
Query: 13 DEESWLASVIGQVDKLALRIGGYEE-EPTDRGFSDDESDGSTSEDDEVP-----GASGFEDAVEDADY-----DSG-----------FEGANEISDRPQSTDTVQDPEEERGLSKTLENTLLRHMPSTKEGKANSLPVTQPHSSQNRLNMEVAQTLEEILPGDAPHKSRQEMVPEQVSAVLIADNAPSASVTPRHSQDRFNEDDLPASER-APSQKQEA--------VGGGFNLMFSTPAHSRDRNTFILGPPVAVAPDARCAGSRRGHRDKNRSKEDLGTTLPEAMRTDTTRKSAPVNASLSPSTSRPLTNINRSAGSTVKK-FSYMNDTDWLKPKEDLL-EAAPPQPEVAA-VAVPGEYAEIQI---------------TTAAAVDSGGVSLPWAAWKNQRRPSLETEQQRRQEILEDGYAKGETGSETGASDECARDTTTDEGGLAETEAVASADAGNDFDVADRLHEF----LLEDQGDENGYGESHE---GNGTIQVVGEDREGADNDGVGLSDNWADGVEHPDGLTDETAVTIGAKRASVETGKGAEELGWMIDSPVGFAPSKRGKTQLQYPLVVMRHSARLDDAIHERQRKREAWAPGCESDENSAGKGGSDGIKGLDDGVGDELDAVPWPDRALRPYDSPIIDTDLPARQAKELSRYGMDSQTLILCSPFRRCLQTAGVVARTLGVTGVTVDLEVGERMDKVRKEIAELALALEEDSDATLGEIQPAPVFTYLKEEDMREALGPGVQFERLVGEQPPEDESGVEAKHRFIATIARVREEQLRDGPVLVVAHGDTLDAAGESLASQIVFEADYCAWALFHLDTHTGYVAESYGTQMIPL 2382
+ SWL VI QVD+LAL+IGGYEE EP GFSDDESD +++ G SGFEDA E D+G E A E D PQS D ++ + ER + + ++PS L VT+ SQ + Q EE +S + P+ VS+ DNAP S TP SQ R +DD+P E P QK + V G + FSTPAH+RDR+ GPP+ P A AGSRR +R+K RS E L M T ++ + V+ S +P R GS KK FSY++DT W+KPKE+L E + P PE+ + AV G +A Q TTA A + S P +N+ RP LE +Q ++ + + ET SE + A D ++ G + TE A A A + E L +DQ D NG E HE G G + ++ + + G+ D D VE PD + +E TIGAKR S E G G+ W++D+P GFAPSKR K Q ++PL VMRHSARLDDAI ERQRK A G SDE+ A K SDG KGL+ GDEL AVPWPDRALRPYDSPI+DTDLPARQAK L R GM SQT+I+CSPFRRCLQTAGVVARTLGV VTV L+VGERMDKVRKEIAELAL EE SD TL + P F+YL E DMR ALG GVQ E +VGEQPPE+ESG+EAK RFI TIA VREEQLRD PVLVVAHGDTL AAGESLASQIVFEADYCAWALF+LDTH G+V ESYG Q IPL
Sbjct: 5 ENPSWLGGVIDQVDRLALKIGGYEEAEPPGNGFSDDESDSNSTSXXXXXXXXXSGDSGFEDAAEXXXXXXXXXDAGPSPVLKTRTEYKEEAAEDGDAPQSDD-LKPMKPERSSKQVPPVSSAENIPS--------LSVTRSQISQENCDENDVQGSEE--------ESLGKECPQVVSS---GDNAPLESATPSSSQGRLTKDDVPVLEGDVPRQKGDGNSPRQPLDVLGDLDPTFSTPAHNRDRDALRKGPPLDAVPVASSAGSRRVNREKKRSNEGLNAM--SLMNTQISKDAGHVSPSRAP----------RLPGSKKKKKFSYVSDTTWMKPKEELATETSSPPPELESRAAVTGGHAPSQAPPARKPLASDCAAPETTAGAAEVDQASTPR---RNRHRPPLEKDQGLKK--ADTAFLPVETRSEE-PLEVRAEDGKSNGGSMPVTEEFAEAVALGHPEGRPAPDETVTTDLPQDQADANGLEEPHERENGTGHARAF-QEGDYQEEARQGIEDR--DEVE-PD-IWNEGVATIGAKRMSSENGMGSPAEEWILDAPEGFAPSKREKLQSEHPLAVMRHSARLDDAIFERQRKLGAMTAGSGSDEDVAKKAVSDGSKGLESCDGDELAAVPWPDRALRPYDSPIVDTDLPARQAKALGRLGMGSQTVIICSPFRRCLQTAGVVARTLGVASVTVHLQVGERMDKVRKEIAELALDSEERSDGTLATKETVPAFSYLAEADMRAALGAGVQLEGIVGEQPPEEESGIEAKQRFIVTIANVREEQLRDSPVLVVAHGDTLGAAGESLASQIVFEADYCAWALFNLDTHCGFVTESYGIQTIPL 807
BLAST of mRNA_P-littoralis_Contig87.157.1 vs. uniprot
Match: A0A6H5KJH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH9_9PHAE) HSP 1 Score: 491 bits (1265), Expect = 2.540e-159 Identity = 372/836 (44.50%), Postives = 460/836 (55.02%), Query Frame = 1
Query: 13 DEESWLASVIGQVDKLALRIGGYEE-EPTDRGFSDDESD------GSTSEDDEVPGASGFEDAVEDADYDSGF---------------EGANEISDRPQSTDTVQDPEEERGLSKTLENTLLRHMPSTKEGKANSLPVTQPHSSQNRLNMEVAQTLEEILPGDAPHKSRQEMVPEQVSAVLIADNAPSASVTPRHSQDRFNEDDLPASE----------RAPSQKQEAVGGGFNLMFSTPAHSRDRNTFILGPPVAVAPDARCAGSRRGHRDKNRSKEDLGTTLPEAMRTDTTRKSAPVNASLSPSTSRPLTNINRSAGSTVKK-FSYMNDTDWLKPKEDLLE--AAPPQPEVAAVAVPGEYAEIQIT----------TAAAVDSGGVSLPWAAW--KNQRRPSLETE------------QQRRQEILEDGYAKGETGSETGASDECARDTTTDEGGLAETEAVASADAGNDFDVADRLHEFLLEDQGDENGYGESHE---GNGTIQVVGEDREGADNDGVGLSDNWADGVEHPD----GLTDETAVTIGAKRASVETGKGAEELGWMIDSPVGFAPSKRGKTQLQYPLVVMRHSARLDDAIHERQRKREAWAPGCESDENSAGKGGSDGIKGLDDGVGDELDAVPWPDRALRPYDSPIIDTDLPARQAKELSRYGMDSQTLILCSPFRRCLQTAGVVARTLGVTGVTVDLEVGERMDKVRKEIAELALALEEDSDATLGEIQPAPVFTYLKEEDMREALGPGVQFERLVGEQPPEDESGVEAKHRFIATIARVREEQLRDGPVLVVAHGDTLDAAGESLASQIVFEADYCAWALF 2322
++ SWL S+I QVD+LAL+IGGYEE +P GFSDDESD GS+SE G FE E A E D PQS D ++ + E+ + ++ ++PS L V + +SQ + Q EE K + P+ VS+ DNAP S T S+ +DD+P E +P Q + VG + FSTPAHSRDR+ GPP+ P A AGSRR +R+K K + G M T + + V+ S +P R GS KK FSY++DT W+KPKE+L ++PP + AV G +A Q+ AA G + ++ +N+ RP E + + R +E L + + E G G R T+E +AE A+A + D H L EDQ D NG E HE G G + +EG G + G++ D G+ +E TIGAKR S E G G+ W++DSP GFAPSKRGK Q ++PL VMRHSARLDDAI ERQR A G SDE+ A K SDG KGL+ G GDEL AVPWPDRALRPYD PI+DTDLPARQAK L R GM SQT+I+CSPFRRCLQTAGVVARTLGV VTV L+VGERMDKVRKEIAELAL EE SD TL + P F+YL+E DMR ALG GVQ ER++GEQPPE+ESG+EAK RFIATIA+VREEQLRD PVLVVAHGDTLDAAGESLASQIVFE A++
Sbjct: 5 EKPSWLGSMIDQVDRLALKIGGYEEPKPPGNGFSDDESDSNSTNSGSSSEX-XXSGDXXFEXXXXXXXXXXXXXAGPSPVLKTRTEYKEEAAEGGDAPQSDD-LEPMKPEQSSKQIPPVSIADNIPS--------LSVRRSQTSQENCDENDVQGSEE--------KPLGKEYPQVVSS---GDNAPLDSATSSRSEGLLTKDDVPVLEGDLPRPQGDGNSPRQPLDVVGD-VDSTFSTPAHSRDRDALRKGPPLDAVPVASSAGSRRVNREK---KNNEGLNAKSPMNTQILKDAGHVSPSGAP----------RLPGSKKKKNFSYVSDTTWIKPKEELAAETSSPPLELASRAAVTGGHAPSQVPPARKPLASDCAAAEATEGAAEVDQSSTPRRNRHRPPREKDHGLKKADTDFPMETRPEEPL---HVRAEDGKSNGG-----RMPVTEE--IAEAVALAHPEGRPAPDETVTTH--LPEDQADANGLEEPHERENGTGHARAF---QEG------GYQEEARQGIDDRDEVEPGIWNEGVATIGAKRMSSENGMGSPAEEWILDSPEGFAPSKRGKLQSEHPLAVMRHSARLDDAIFERQRMLGAITAGSGSDEDVAKKAVSDGSKGLESGDGDELAAVPWPDRALRPYDPPIVDTDLPARQAKALGRLGMGSQTVIVCSPFRRCLQTAGVVARTLGVASVTVHLQVGERMDKVRKEIAELALDSEERSDGTLATKEAVPAFSYLEEADMRAALGAGVQLERIIGEQPPEEESGIEAKQRFIATIAKVREEQLRDSPVLVVAHGDTLDAAGESLASQIVFEGQMICAAMY 784
BLAST of mRNA_P-littoralis_Contig87.157.1 vs. uniprot
Match: A0A835YJL4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJL4_9STRA) HSP 1 Score: 101 bits (251), Expect = 2.540e-18 Identity = 105/364 (28.85%), Postives = 134/364 (36.81%), Query Frame = 1
Query: 1753 WPDRALRPYDSPIIDTDLPARQAKELSRYGMDSQTL-----------------------------------------ILCSPFRRCLQTAGVVARTLGVTGVTVDLEVGERMDKVRKEIAELALALE-----EDSDATLGEIQPAPV-------FTYLKEEDMREALGPGVQFERLVGEQPPEDESGVEAKHRFIATIARV-REEQL-------------------------------------------------------------------------------------------RDG--PVLVVAHGDTLDAAGESLASQIVFEADYCAWALFHLDTHTGY-------VAESYGTQMIPL 2382
W DRA RPYD+PI+D AR A + +DS L I+ SPFRRCLQTAG VAR G V V L VGERMDKVR+E L ++ + DA+ + P F YL E+M +ALG GV ++GE+PP ES ++AK R+ +AR+ R ++L R G V+VVAHGDTL AA ESLA +++EADYCAW + G VA G QM+PL
Sbjct: 395 WTDRAARPYDTPIVDDGRAARAALAV----LDSGALEGAWYSGASDATVWEMAAAGAPIGXXXXXXXXXXXXXXXLCIVSSPFRRCLQTAGHVARVFGCGVVHVHLGVGERMDKVRQECGPGTLLVDPAEEAQRPDASASDAPPPAASSLRRVAFAYLTPEEMGDALGEGVALGTVLGERPPLTESAMQAKLRYSHVLARMCRGKELPAVANGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKARTGISHVVVVAHGDTLGAAAESLAGHLLYEADYCAWLAVAVGQRGGVGGGALGGVAACAGVQMMPL 754
BLAST of mRNA_P-littoralis_Contig87.157.1 vs. uniprot
Match: A0A812JSX5_9DINO (VAPB protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812JSX5_9DINO) HSP 1 Score: 70.9 bits (172), Expect = 9.980e-9 Identity = 63/198 (31.82%), Postives = 87/198 (43.94%), Query Frame = 1
Query: 1753 WPDRALRPYDSPIIDTDLPARQAKELSRYGMDSQTL--ILCSPFRRCLQTAGVVARTLGVTGVTVDLEVGERMDKVRKEIAELALALEEDSDATLGEIQPAPVFTYLK-EEDMREALGPGVQFE-RLVGEQPPEDESGVEAKHRF-----IATIARVREEQLRDGPVLVVAHGDTLDAAGESLASQIVFEADYCAWAL 2319
WPD RPYD+PI + +LP A+ L + + ++ SPFRRCLQTA + R LG+ + VD +GE M V ++ + L LG F Y+ EE A G+Q + P DES + R IA A +EE VL+V H D L L ++ + CAW L
Sbjct: 34 WPDAGQRPYDTPISNEELPLESAQVLKESLPEGVAVCAVVSSPFRRCLQTAALAGRQLGLKMLHVDNRLGELMAAVARDCGPVKLE-------ALG-------FRYISFEEAANIAEEAGLQLHWDPAADVPATDESAADILRRVDAGAAIARSALGKEEFSPTECVLLVTHADLLMQRLSKLMPGSIWAPETCAWFL 217 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig87.157.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig87.157.1 >prot_P-littoralis_Contig87.157.1 ID=prot_P-littoralis_Contig87.157.1|Name=mRNA_P-littoralis_Contig87.157.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=795bp MDAEDEESWLASVIGQVDKLALRIGGYEEEPTDRGFSDDESDGSTSEDDEback to top mRNA from alignment at P-littoralis_Contig87:313704..317110+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig87.157.1 ID=mRNA_P-littoralis_Contig87.157.1|Name=mRNA_P-littoralis_Contig87.157.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3407bp|location=Sequence derived from alignment at P-littoralis_Contig87:313704..317110+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig87:313704..317110+ >mRNA_P-littoralis_Contig87.157.1 ID=mRNA_P-littoralis_Contig87.157.1|Name=mRNA_P-littoralis_Contig87.157.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2385bp|location=Sequence derived from alignment at P-littoralis_Contig87:313704..317110+ (Pylaiella littoralis U1_48)back to top |