mRNA_P-littoralis_Contig87.129.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig87.129.1
Unique NamemRNA_P-littoralis_Contig87.129.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig87.129.1 vs. uniprot
Match: D8LPI1_ECTSI (Sulfhydryl oxidase n=2 Tax=root TaxID=1 RepID=D8LPI1_ECTSI)

HSP 1 Score: 238 bits (607), Expect = 9.870e-78
Identity = 106/155 (68.39%), Postives = 127/155 (81.94%), Query Frame = 1
Query:   22 NEKKIDNNGLCTSTWGSSGWFSLHCVAAGHPVDPDEYDDIRGNMRGHTKHKYIAYFKSAGHVLPCRFCRESYLLVLTEIPIEKYIHSRQKLYEWLFIVHNKVNEKIGDKQETSLQAVVDKYKKLRATCSPSSKSLGCTEPANKNAKMSCRLVIEP 486
            NEK  DNNGLCTSTWG  GWF LHCVAAG+PV PDEYDDIRGN RGHT+  Y ++FK+ GHVLPCRFCR+SY+   +E P+E+Y+HSRQ L+EWLFI+HNKVN+KIGDKQET L++VVDKY++ RA C    K+ GCT+PA  N KM CRLV+EP
Sbjct:    6 NEKMNDNNGLCTSTWGPPGWFFLHCVAAGYPVHPDEYDDIRGNARGHTRRGYSSFFKNTGHVLPCRFCRDSYVHFSSETPVEEYLHSRQALFEWLFIIHNKVNDKIGDKQETDLESVVDKYERFRAKCHHQ-KATGCTDPARHNEKMICRLVVEP 159          
BLAST of mRNA_P-littoralis_Contig87.129.1 vs. uniprot
Match: A0A6H5JX91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX91_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 2.910e-42
Identity = 78/124 (62.90%), Postives = 90/124 (72.58%), Query Frame = 1
Query:   88 LHCVAAGHPVDPDEYDDIRGNMRGHTKHKYIAYFKSAGHVLPCRFCRESYLLVLTEIPIEKYIHSRQKLYEWLFIVHNKVNEKIGDKQETSLQAVVDKYKKLRATCSPSSKSLGCTEPANKNAK 459
            LHCVAAG PVDPDEYDDIRGNMRG     Y+++FK+AGHVLPCRFCRESYLL                 + WL I+HNKVN+K G KQETSLQAVVDKY+K RA+C  + K+LGCTEPA K  +
Sbjct:  380 LHCVAAGFPVDPDEYDDIRGNMRGKINKHYMSFFKNAGHVLPCRFCRESYLL-----------------FGWLAIIHNKVNKKNGAKQETSLQAVVDKYEKFRASCQ-NRKALGCTEPAKKTRR 485          
BLAST of mRNA_P-littoralis_Contig87.129.1 vs. uniprot
Match: A0A6C0F9B8_9ZZZZ (Thiol oxidase n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0F9B8_9ZZZZ)

HSP 1 Score: 115 bits (289), Expect = 2.580e-29
Identity = 56/150 (37.33%), Postives = 86/150 (57.33%), Query Frame = 1
Query:   43 NGLCTSTWGSSGWFSLHCVAAGHPVDPDEYDDIRGNMRGHTKHKYIAYFKSAGHVLPCRFCRESYLLVLTEIPI-EKYIHSRQKLYEWLFIVHNKVNEKIGDKQETS-LQAVVDKYKKLRATCSPSSKSLGCTEPANKNAKMSCRLVIEP 486
            NG+ T  WG  GWF LHC+  G PVDP ++D+ +      T+  Y  +F + G +LPC++CRESY   L    +    + +R  L EW + +HN+VN K+GDK E + L ++ +KY++ RA C  +    GC+ P N   K+  ++ I P
Sbjct:    9 NGMMTKVWGPPGWFFLHCITFGFPVDPTKFDEEKELPENTTRTAYYNFFMNVGDILPCKYCRESYKEFLKHENVGPPDVTNRDSLVEWFWKMHNRVNAKLGDKYEDADLDSIKEKYEEFRARCDKNKIEKGCSVPLN-GKKLCSKVEIYP 157          
BLAST of mRNA_P-littoralis_Contig87.129.1 vs. uniprot
Match: A0A6C0EYJ6_9ZZZZ (Thiol oxidase n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0EYJ6_9ZZZZ)

HSP 1 Score: 101 bits (252), Expect = 1.550e-23
Identity = 62/172 (36.05%), Postives = 92/172 (53.49%), Query Frame = 1
Query:    7 DDEKKNEKKIDNNGLCTSTWGSSGWFSLHCVAAGHP--VDPDEYDDIRGNMRGHTKHKYIAYFKSAGHVLPCRFCRESYLLVLTEIPIEKYIHSRQKLYEWLFIVHNKVNEKIG-DKQET-SLQAVVDKYKKLRATCSP---------SSKSLGCTEPANKNAKMSCRLVIE 483
            D E+   K +DN GL T  WG SGW  LHCV+ G+P  +DP   + I        ++ Y  +F   G V+PC++CR SY+   T+      + SR++  +WL+ +HN VN+K+G  K E  + + V +KY+  RA+C P         SS   GC  PA+  +K S   V+E
Sbjct:   11 DGEECANKNVDN-GLMTRLWGPSGWMFLHCVSFGYPYKIDPTNQEHID------KQNDYYRFFYYLGKVMPCKYCRNSYMEFFTKSSPMSQLGSRKEFTKWLYDIHNMVNDKLGVPKCEIPTFEEVEEKYQSFRASCKPLTEAQRTTNSSSVKGCIIPADGKSKRSVIKVVE 175          
BLAST of mRNA_P-littoralis_Contig87.129.1 vs. uniprot
Match: A0A6C0ANJ4_9ZZZZ (Thiol oxidase n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0ANJ4_9ZZZZ)

HSP 1 Score: 77.8 bits (190), Expect = 6.880e-15
Identity = 38/118 (32.20%), Postives = 66/118 (55.93%), Query Frame = 1
Query:   46 GLCTSTWGSSGWFSLH-CVAAGHPVDPDEYDDIRGNMRGHTKHKYIAYFKSAGHVLPCRFCRESYLLVLTEIPIEKYIHSRQKLYEWLFIVHNKVNEKIGDKQETSLQAVVDKYKKLR 396
            GL T +WG  GW+ L  C+   +P   D  +     ++ H K+       S  + +PC +CR S    + E+P+E ++  R KL+EWL+++ NKVNEK+ ++++   Q   D+ K+L+
Sbjct:   10 GLSTKSWGPPGWYFLFSCIMGAYPPQIDNKNKEHQKIKKHFKNM----LSSLVYTMPCVYCRNSLKQFIKELPMEPFLSGRLKLFEWLYLIRNKVNEKLINQEQ---QCYNDEKKRLK 120          
BLAST of mRNA_P-littoralis_Contig87.129.1 vs. uniprot
Match: A0A6C0B4L9_9ZZZZ (Thiol oxidase n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0B4L9_9ZZZZ)

HSP 1 Score: 76.3 bits (186), Expect = 6.420e-14
Identity = 33/95 (34.74%), Postives = 52/95 (54.74%), Query Frame = 1
Query:   55 TSTWGSSGWFSLHCVAAGHPVDPDEYDDIRGNMRGHTKHKYIAYFKSAGHVLPCRFCRESYLLVLTEIPIEKYIHSRQKLYEWLFIVHNKVNEKI 339
            T  WG  GW  LH +A  +P +P++           T+ KY  +F +  ++LPC +CR S      ++PIE  + +   L+EWL+ +HNKVN K+
Sbjct:    3 TRFWGPDGWHLLHSIAYTYPSNPNKT----------TRQKYKRFFNTVPYILPCVYCRNSLHKFYKDLPIENSLQNNNSLFEWLYKIHNKVNNKL 87          
BLAST of mRNA_P-littoralis_Contig87.129.1 vs. uniprot
Match: A0A6C0F4J2_9ZZZZ (Thiol oxidase n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0F4J2_9ZZZZ)

HSP 1 Score: 74.3 bits (181), Expect = 6.750e-13
Identity = 35/95 (36.84%), Postives = 55/95 (57.89%), Query Frame = 1
Query:   55 TSTWGSSGWFSLHCVAAGHPVDPDEYDDIRGNMRGHTKHKYIAYFKSAGHVLPCRFCRESYLLVLTEIPIEKYIHSRQKLYEWLFIVHNKVNEKI 339
            T+ WG SGW  LH +   +P  P   D I+  MR            S  ++LPC++CR S+   +  +PI+ Y+ SR+++ EWL+ +HNKVN+K+
Sbjct:    3 TTFWGPSGWQFLHTITFIYPEYPTFSDKIK--MRD--------MMSSMCYILPCKYCRASFSKYMASLPIDNYLDSRERIIEWLYKMHNKVNKKL 87          
BLAST of mRNA_P-littoralis_Contig87.129.1 vs. uniprot
Match: A0A6C0LGK7_9ZZZZ (Thiol oxidase n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LGK7_9ZZZZ)

HSP 1 Score: 73.2 bits (178), Expect = 9.340e-13
Identity = 47/159 (29.56%), Postives = 75/159 (47.17%), Query Frame = 1
Query:   10 DEKKNEKKIDNNGLCTSTWGSSGWFSLHCVAAGHP--VDPDEYDDIRGNMRGHTKHKYIAYFKSAGHVLPCRFCRESYLLVLTE--IPIEKYIHSRQKLYEWLFIVHNKVNEKIGDKQ--ETSLQAVVDKYKKLRATCSPSSKSLGCTEPANKNAKMSC 468
            DE   EK  +   + T  WG   WF LH +A  +P  ++ D ++ IR       ++   ++  + G++LPC  C  SY   + E    I KY+ SR KL  +++++H +VN K+G  Q    S + V+ K+ K      P    L   E   KN  + C
Sbjct:   12 DENYFEKLSEYTSVRTHVWGPPAWFFLHSMAMAYPKKINEDNFEHIR------IRNSMFSFLSNLGNILPCNLCSVSYNGYIKEPSFEISKYLGSRAKLCYFIYLIHERVNRKLGVPQCYRPSFKKVIKKFGKFLV--GPDQCKLTKIEQQTKNTMVGC 162          
BLAST of mRNA_P-littoralis_Contig87.129.1 vs. uniprot
Match: A0A1X9VNU8_9VIRU (Sulfhydryl oxidase n=1 Tax=Mimivirus AB-566-O17 TaxID=1988039 RepID=A0A1X9VNU8_9VIRU)

HSP 1 Score: 60.1 bits (144), Expect = 4.030e-8
Identity = 43/119 (36.13%), Postives = 64/119 (53.78%), Query Frame = 1
Query:   19 KNEKKI-DNNGLCTSTWGSSGWFSLHCVAAG-HPVDPD----EYDDIRGNMRGHTKHKYIAYFKSAGHVLPCRFCRESYLLVLTEIPIEKYIHSRQKLYEWLFIVHNKVNEK-IGDKQE 354
            K EKKI D   + T  +G   WF+L  +  G +PV  D    E+ +I       T+H Y        + LPC+FCR S+     E+PI+K+ +SR  L  WL+++ +KVN K IG ++E
Sbjct:   19 KTEKKINDIYAITTKNYGPY-WFTLFTMILGQYPVTVDWNNPEHKEI-------TQHFYYL-LSGLRYTLPCKFCRASFAKFFKELPIDKFTNSRIDLALWLYLMKDKVNNKLIGQEKE 128          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig87.129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LPI1_ECTSI9.870e-7868.39Sulfhydryl oxidase n=2 Tax=root TaxID=1 RepID=D8LP... [more]
A0A6H5JX91_9PHAE2.910e-4262.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6C0F9B8_9ZZZZ2.580e-2937.33Thiol oxidase n=1 Tax=viral metagenome TaxID=10705... [more]
A0A6C0EYJ6_9ZZZZ1.550e-2336.05Thiol oxidase n=1 Tax=viral metagenome TaxID=10705... [more]
A0A6C0ANJ4_9ZZZZ6.880e-1532.20Thiol oxidase n=1 Tax=viral metagenome TaxID=10705... [more]
A0A6C0B4L9_9ZZZZ6.420e-1434.74Thiol oxidase n=1 Tax=viral metagenome TaxID=10705... [more]
A0A6C0F4J2_9ZZZZ6.750e-1336.84Thiol oxidase n=1 Tax=viral metagenome TaxID=10705... [more]
A0A6C0LGK7_9ZZZZ9.340e-1329.56Thiol oxidase n=1 Tax=viral metagenome TaxID=10705... [more]
A0A1X9VNU8_9VIRU4.030e-836.13Sulfhydryl oxidase n=1 Tax=Mimivirus AB-566-O17 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig87contigP-littoralis_Contig87:228056..228541 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog654926.Q8QNC1_ESV1K
Model size486
Max annot lvl10239|Viruses
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.32e-80
EggNOG OGs4QB94@10239|Viruses,4QVJI@35237|dsDNA viruses no RNA stage
DescriptionErv1 / Alr family
Cds size486
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791745.0015366-CDS-P-littoralis_Contig87:228055..2285411680791745.0015366-CDS-P-littoralis_Contig87:228055..228541Pylaiella littoralis U1_48CDSP-littoralis_Contig87 228056..228541 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig87.129.1prot_P-littoralis_Contig87.129.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig87 228056..228541 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig87.129.1

>prot_P-littoralis_Contig87.129.1 ID=prot_P-littoralis_Contig87.129.1|Name=mRNA_P-littoralis_Contig87.129.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=162bp
MNDDEKKNEKKIDNNGLCTSTWGSSGWFSLHCVAAGHPVDPDEYDDIRGN
MRGHTKHKYIAYFKSAGHVLPCRFCRESYLLVLTEIPIEKYIHSRQKLYE
WLFIVHNKVNEKIGDKQETSLQAVVDKYKKLRATCSPSSKSLGCTEPANK
NAKMSCRLVIEP
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mRNA from alignment at P-littoralis_Contig87:228056..228541+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig87.129.1 ID=mRNA_P-littoralis_Contig87.129.1|Name=mRNA_P-littoralis_Contig87.129.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=486bp|location=Sequence derived from alignment at P-littoralis_Contig87:228056..228541+ (Pylaiella littoralis U1_48)
ATGAACGATGATGAGAAAAAAAATGAGAAAAAAATCGACAACAATGGGCT CTGTACGAGCACATGGGGATCGTCTGGATGGTTTTCCCTCCATTGCGTCG CCGCTGGTCACCCCGTTGATCCGGACGAATATGATGACATTCGCGGCAAC ATGAGAGGGCATACCAAGCACAAGTACATCGCTTATTTCAAGAGCGCGGG GCACGTCTTACCGTGCCGATTCTGTAGAGAATCATATCTTCTTGTCCTGA CCGAAATTCCAATTGAGAAATATATCCACTCGCGACAAAAGCTGTATGAG TGGCTCTTTATCGTACACAACAAGGTCAACGAAAAAATCGGCGACAAACA AGAGACCAGTTTGCAAGCGGTCGTGGACAAGTACAAAAAGTTGAGAGCGA CTTGTTCTCCCTCCAGCAAATCACTCGGGTGCACCGAGCCCGCGAACAAA AATGCGAAGATGAGTTGCAGGCTTGTGATTGAACCC
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Coding sequence (CDS) from alignment at P-littoralis_Contig87:228056..228541+

>mRNA_P-littoralis_Contig87.129.1 ID=mRNA_P-littoralis_Contig87.129.1|Name=mRNA_P-littoralis_Contig87.129.1|organism=Pylaiella littoralis U1_48|type=CDS|length=486bp|location=Sequence derived from alignment at P-littoralis_Contig87:228056..228541+ (Pylaiella littoralis U1_48)
ATGAACGATGATGAGAAAAAAAATGAGAAAAAAATCGACAACAATGGGCT
CTGTACGAGCACATGGGGATCGTCTGGATGGTTTTCCCTCCATTGCGTCG
CCGCTGGTCACCCCGTTGATCCGGACGAATATGATGACATTCGCGGCAAC
ATGAGAGGGCATACCAAGCACAAGTACATCGCTTATTTCAAGAGCGCGGG
GCACGTCTTACCGTGCCGATTCTGTAGAGAATCATATCTTCTTGTCCTGA
CCGAAATTCCAATTGAGAAATATATCCACTCGCGACAAAAGCTGTATGAG
TGGCTCTTTATCGTACACAACAAGGTCAACGAAAAAATCGGCGACAAACA
AGAGACCAGTTTGCAAGCGGTCGTGGACAAGTACAAAAAGTTGAGAGCGA
CTTGTTCTCCCTCCAGCAAATCACTCGGGTGCACCGAGCCCGCGAACAAA
AATGCGAAGATGAGTTGCAGGCTTGTGATTGAACCC
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