mRNA_P-littoralis_Contig87.56.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig87.56.1
Unique NamemRNA_P-littoralis_Contig87.56.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig87.56.1 vs. uniprot
Match: A0A6H5KFB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFB9_9PHAE)

HSP 1 Score: 326 bits (835), Expect = 2.720e-96
Identity = 204/501 (40.72%), Postives = 277/501 (55.29%), Query Frame = 2
Query: 1313 LAANKNISDFAAALTRAVVTEDTLELANGMCFLGKRALGSKLFIRPCYKEMADLILSG----EMQNFVVTGTPGIGKSMFGYYLLYLLRCEGKNVVFELKGDWYRFGNEGAQEGTYQEFRRAGFTRDPTAWYLSDPEGSPRENFEGTTTVLVSPDYERIKEFLKLPTSKRIFMPVWSLEELLKCRRVVFSHVLDTDVVKSFGVVGGVARAAFNEEKFELLKDGILNAVGEVDVGLLRQA-ARLSSVQNRIQTNKIGDKLFHILSNSADNFKGYTVTFASNYTRDSIALGAAERGRDELLA-FVGESIRNPDVSRMLGGGSTVGNMFEQAAHLEISGRRTAGAPFNMAILNATRGGFLSG-ESKIWNLSFNEVQVFKGNGSAFKYDSEIYYRPYSTGFPGIDSFALDSRDDTLYFFQMKYTGAEPIKQGSK------VQSFWDAAVASEGVSVKN-CVLVFVVPEGTAFEKSKVLSK------CWLPGASTDFLSACGVCVV 2755
            +A  K ++DF A LT+AVV ++TLELA+G  FLG+  L SKLFIRPCYK++++LIL G     M   VVTGTPGIGKS FG+YL+YLLR +G  VV E K  W+RF +EG   G +  FRRAG+    + WYLSDPE  P+E     T VL+SP   R+ EF+K P S+R +MP W L+EL +CR+ VF HV +TDV + F  VGGVARA F+ EK + +   +  A   +D+ LL+Q  +R     +++ T++ GD L H+L      F+ ++V FAS +    + LG   +     LA FVG +  + ++   +      G  FE  AH  I G       F+M IL+       S  E     LSF + Q F+GN       +  YYRP S  F   DSF +DS   TL+FFQ+K  G  P K+G K      V+ +W  A    G  +K   V  FVVPEG  + K+    +       W    +  F SAC VCV+
Sbjct:   34 VAVPKALADFGAVLTKAVVADNTLELADGTFFLGEPRLRSKLFIRPCYKDLSELILEGVTDGTMDKIVVTGTPGIGKSEFGFYLMYLLRGQGNTVVLERKDSWFRFSDEGVTVGYFYSFRRAGYLYGNSTWYLSDPEDRPKELLGLPTVVLLSPRKSRVNEFMKQPGSRRFYMPPWCLDELFRCRQAVFPHVPETDVRERFSKVGGVARAVFDAEKLKQVCLKMQAAASNMDLNLLQQILSRSRDDVDQVSTDRSGDALLHLLPIPETGFEEFSVDFASEFAH-IVTLGELPKKEFAPLASFVGAAFAHDELGDKVTAERAAG--FETIAHKTIGGASEQ-QWFDMRILSRASSSTKSVLEGNRLRLSFVKEQSFEGNSFPDALVAGTYYRPGSPNFAAADSFGVDSGSKTLWFFQVKSAGLPP-KEGEKAVKWTHVEKYWRRAKLHHGAPIKKRFVYAFVVPEGKVWNKATETCEEDGGRGDWRRNVTDGFKSACDVCVI 529          
BLAST of mRNA_P-littoralis_Contig87.56.1 vs. uniprot
Match: A0A835Z6Q5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Q5_9STRA)

HSP 1 Score: 188 bits (477), Expect = 4.720e-47
Identity = 139/453 (30.68%), Postives = 217/453 (47.90%), Query Frame = 2
Query: 1328 NISDFAAALTRAVVTEDTLELANGMCFLGKRALGSKLFIRPCYKEMADLI---LSGEMQNFVVTGTPGIGKSMFGYYLLYLLRCEGKNVVFELKGDWYRFGNEGAQEG-TYQEFRRAGFTRDPTAWYLSDP--EGSPRENFEGTTTVLVSPDYERIKEFLKLPTSKRIFMPVWSLEELLKCRRVVFSHVLDTDVVKSFGVVGGVARAAFNEEKFELLKDGILNAVGEVDVGLLRQAARLSSVQNRIQTNKIGDKLFHILSNSADNFKGYTVTFASNYTRDSIALGAAERGRDELLAFVGESIRNPDVSRMLGGGSTVGNMFEQAAHLEISGRRTAGAPFNMAILNATRGGFLSGESKIWNLSFNEVQVFKGNGSAFKYDSEIYYRPYSTGFPGIDSFALDSRDDTLYFFQMKYTGAEPIKQGSKVQSFWDAAVASEGVSV---KNCVLVFVVP 2659
            ++  F  AL+RA   +D L L +G  F+G    G++++IR CY+E+ D I   ++   +  V+TGTPGIGKS +  Y L+ LR  G  VV+++  D+YRF  E  Q   T   F+ AG    P  W+L DP  +  P     G T V VSP  ER K FLK P +   +MPVWS EE+ +CR+++F HV  + V       GGV R        +  +  +  A+ +     LR A  L++ ++   T  + DK+ H+ +  AD F    + +AS Y  D++     E  + EL AF+  S R P ++ + G       +FE   H  +      G+ F   +L   + G  +     +N +F     F      ++ +  +YY P ++     DSFA+   D  L+ FQ+       +K+   +    D   A+ G+S+      VL FVVP
Sbjct:   82 SVVTFWRALSRASDDDDCLALKDGTWFMGDYVRGNRIYIRSCYRELMDTIKAMVTSGTRRVVITGTPGIGKSCYALYWLWHLRRAGNTVVYQIGADFYRFSGELVQHADTIGAFKNAGGLWHPDVWFLCDPARDHEPYGGCLGVTLVFVSPSTERYKAFLKEPRATTRYMPVWSQEEVQRCRQLLFDHVPQSRVQDLLEQWGGVPRFVLQFADDDTQQAKLQQAIRKCATAGLR-ATILNAGEDAGSTAALSDKVLHMCT--AD-FVHVRLMWASQYAFDALCEAQGEASKGELRAFIASSARLPSLATLRG------LVFEPYVHRLLGN----GSCFEYRVLEPAQHGVTT-----FNFAFRRSVTFARLRDIWRIEEGVYYAPRASNLSAGDSFAII--DGVLFIFQITVAAEHGVKKAGTL----DIVEAACGMSIGARPEFVLAFVVP 509          
BLAST of mRNA_P-littoralis_Contig87.56.1 vs. uniprot
Match: A0A6H5KCR9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCR9_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 2.040e-32
Identity = 67/118 (56.78%), Postives = 85/118 (72.03%), Query Frame = 2
Query: 1307 LPLAANKNISDFAAALTRAVVTEDTLELANGMCFLGKRALGSKLFIRPCYKEMADLILSG----EMQNFVVTGTPGIGKSMFGYYLLYLLRCEGKNVVFELKGDWYRFGNEGAQEGTY 1648
            LP+A  K ++DF A LT+AVV ++TLELA+G  FLG+  L SKLFIRPCYK++++LIL G     M   VVTGTPGIGKS FG+YL+YLLR +G  VV E KG W+RF + G   G +
Sbjct:   13 LPVAVPKALADFGAVLTKAVVADNTLELADGTFFLGEPRLRSKLFIRPCYKDLSELILEGVTDGTMDKIVVTGTPGIGKSEFGFYLMYLLRGQGNTVVLERKGCWFRFSDGGVTVGDF 130          
BLAST of mRNA_P-littoralis_Contig87.56.1 vs. uniprot
Match: D7G8Q1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Q1_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 5.560e-32
Identity = 69/82 (84.15%), Postives = 73/82 (89.02%), Query Frame = 2
Query: 1316 AANKNISDFAAALTRAVVTEDTLELANGMCFLGKRALGSKLFIRPCYKEMADLILSGEMQNFVVTGTPGIGKSMFGYYLLYL 1561
            AANKN+SDFAAALT AVVTEDTLELANG  FLG   LGSKLFIR CYKEMADLILSG++Q+ VVTGTPGIGKS FGYYLLYL
Sbjct:  138 AANKNVSDFAAALTGAVVTEDTLELANGTFFLGNSDLGSKLFIRHCYKEMADLILSGKVQDVVVTGTPGIGKSTFGYYLLYL 219          
BLAST of mRNA_P-littoralis_Contig87.56.1 vs. uniprot
Match: A0A6H5JNA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNA3_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 1.000e-30
Identity = 67/88 (76.14%), Postives = 74/88 (84.09%), Query Frame = 2
Query: 1289 LAVSDHLPLAANKNISDFAAALTRAVVT-EDTLELANGMCFLGKRALGSKLFIRPCYKEMADLILSGEMQNFVVTGTPGIGKSMFGYY 1549
            +AV D LP+AANKN+SDFA AL+ AVVT EDTLELANG  FLG R  GSKLFIRPCYKEMADLILSGE+++ VV GTPGI K MFGYY
Sbjct:    1 MAVFDPLPVAANKNLSDFAPALSGAVVTDEDTLELANGTFFLGNRDWGSKLFIRPCYKEMADLILSGEVRDVVVIGTPGIVKPMFGYY 88          
BLAST of mRNA_P-littoralis_Contig87.56.1 vs. uniprot
Match: A0A8H3WYS8_GIGMA (Putative crinkler family protein n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H3WYS8_GIGMA)

HSP 1 Score: 128 bits (322), Expect = 4.460e-27
Identity = 112/421 (26.60%), Postives = 191/421 (45.37%), Query Frame = 2
Query: 1322 NKNISDFAAALTRAVVTEDTLELANGMCFLGKRALGSKLFIRPCYKEMADLILSGEMQNFVVTGTPGIGKSMFGYYLLYLLRCEGKNVVF-ELKGDWYRFGNEGA--QEGTYQEFRRAGFTRDPTAWYLSDPEGSPRENFEGTTTVLVSPDYERIKEFLKLPTSKRIFMPVWSLEELLKCRRVVFSHVLDTDVVKSFGVV-GGVARAAFNEEKFELLKDGILNAVGEVDVGLLRQAARLSSVQNRIQTNKIGDKLFHILSN-------SADNFKGYTVT---FASNYTRDSIALGAAERGRDELLAFVGESIRNPDVSRMLGGGSTVGNMFEQAAHLEISGRRTAGAPFNMAILNATRGGFLSGESKIWNLSFNEVQVFKGNGSAFKYDSEIYYRPYSTGFPGIDSFALDSRDDTLYFFQM 2542
            ++ +S F   L    ++   L L++   F GK++  S +FIR CY ++  ++   +++   +TG PGIGK+ FGYY+LY L  + K V++ ++  D   F NEG+  +E  +  F +  +  +P  WY+ D  G   +  E  T ++ SP     +EF K   S   +MPVW+  E+ +CR  +F+H L  D +K+  +  GG+ R        +  ++ + +A+  VD  +L      +   +      +  KL HI +N         +    YT T   FAS Y  + + +      +++L  F+  S      S +   GS  GN+FE+ AH  + G    G  FN+ IL            K   L+F++V   K          ++Y +P    F  +D+    +      FFQM
Sbjct:  116 DEKLSKFWKVLKNVKISGKFLRLSDNNHFFGKQSQPSVVFIRDCYIDLEGIVFDKKIRRLRITGNPGIGKTFFGYYILYKLASKCKTVIYHKVNNDPIIFSNEGSISKENLFS-FNQ--YLNEPETWYIVD--GHVPKECEAKTILVCSPKKGNYREFDKYIGSTIRYMPVWTFNEIEECRSNIFNH-LGIDKIKNLYMRWGGIPRFVLENAHDKAQQNLLQHAIDTVDETILNYVGETNCPDD------VSHKLVHIRTNLPVDEETDVEKVLPYTETYIYFASEYVANEVVVKLKINYKEKLKNFIMAS------SSINEYGSLRGNIFERVAHQILQG----GGTFNIRILEPHSITCKIKIPKRIMLTFDDVNEIK---------EDMYCKPNRKNFASVDAIVAPN-----IFFQM 500          
BLAST of mRNA_P-littoralis_Contig87.56.1 vs. uniprot
Match: A0A2Z6SBH9_9GLOM (Crinkler (CRN) family protein, putative n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6SBH9_9GLOM)

HSP 1 Score: 127 bits (318), Expect = 1.950e-26
Identity = 110/441 (24.94%), Postives = 186/441 (42.18%), Query Frame = 2
Query: 1331 ISDFAAALTRAVVTEDTLELANGMCFLGKRALGSKLFIRPCYKEMADLILSGEMQNFVVTGTPGIGKSMFGYYLLYLLRCEGKNVVFELKGDWYRFGNEGAQEGTYQEFRRAGFTRDPTAWYLSDPEGSPRENFEGTTTVLVSPDYERIKEFLKLPTSKRI-FMPVWSLEELLKCRRVVFSHVLDTDVVKS-FGVVGGVARAAF---NEEKFE-LLKDGILNA-------VGEVDVGLLRQAARLSSVQNRI-----------QTNKIGDKLFHILSNSADNFKGYTVTFASNYTRDSIA----LGAAERGRDELLAFVGESIRNPDVSRMLGGGSTVGNMFEQAAHLEISGRRTAGAPFNMAILNATRGGFLSGESKIWNLSFNEVQVFKGNGSAFKYDSEIYYRPYSTGFPGIDSFALDSRDDTLYFFQMKYTGAEPIK 2569
            +++F   L +A +T   L L N   FLGK    S L+IR CYK+   ++    +    ++G PGIGK++FGYYLLYLL  +   +VF+   +   F   G       +     +  D   WY+ D  G   ++    T ++ S   +  K F        I +MP+WS +E+ +CR+ +++  +D  + +  F   GG+ R      NE+ ++ +LKD I N        VGE DV     +  +  +   +           + ++  +    +  N    +    + FASNY  + +         ER RD++ A  G S+              +GN FE  AH  +      G  F +  L+      +   +   NLS   + ++  + S  K    +YY+ + + FP +DS    ++      FQM      PIK
Sbjct:  133 VNNFWRDLKKASLTNQFLRLPNNTRFLGKEHGLSNLYIRRCYKDFEHIVFDDAINKLRISGNPGIGKTIFGYYLLYLLAKKNATIVFDSCKEKKSFVFNGEHAFRCNDDEIDLYLLDARVWYIVD--GKEPKDVNAKTILICSSKRDHYKHFDNYEGKIAIRYMPIWSWKEIKQCRKYIYNDKIDERLARDLFSKWGGIPRYVLEKANEKVYQNMLKDAIYNCKEDIFDYVGESDVERTLSSHMIVHIHVNLPVKDDKEVGEYELSQYSETQLQLDRNGITPYTETILRFASNYVLEQVTELLETRMRERLRDQIKAGTGNSL--------------LGNAFEYIAHKMLRN----GGNFEVRPLDEYSKENIDDPAAKVNLSQQNLPLYFKSSSIDKIKDGMYYQAWESNFPSLDSVITPNK-----VFQMTIAKHHPIK 548          
BLAST of mRNA_P-littoralis_Contig87.56.1 vs. uniprot
Match: A0A250X9Q7_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X9Q7_9CHLO)

HSP 1 Score: 126 bits (316), Expect = 2.130e-26
Identity = 117/415 (28.19%), Postives = 186/415 (44.82%), Query Frame = 2
Query: 1313 LAANKNISDFAAALTRAVVTEDTLELANGMCFLGKRALGSKLFIRPCYKEMA---DLILSGEMQNFVVTGTPGIGKSMFGYYLLY-LLRCEG-KNVVFELKGDWYRFG-NEGAQEGTYQEFRRAGFTRDPTAWYLSDP-EGSPRENFEGTTTVLVSPDYERIKEFLKLPTSKRIFMPVWSLEELLKCRRVVFSHVLDTDVVKSFGVVGGVARAAFNEEKFELLKDGILNAVGE---VDVGLLRQAARLSSVQNRIQTNKIGDKLFHILSNSADNFKGYTVTFASNYTRDSIALGAAERGRDELLAFVGESIRNPDVSRMLGGGSTVGNMFEQAAHLEISGRRTAGAPFNMAILNATRGGFLSGESKIWNLSFNEVQVFKGNGSAFKYDS--EI--------YYRPYSTGFPGIDS 2497
            L A + + +F  +L +A V    L L  G  FLG    G ++ +R  Y+ +    D +L   ++ F++TGTPGIGKS F + L++ LL+ +G K +V E++   Y F   E    G  Q F   G   D   W++ D  +G  RE +   T +L SP  ER KEFLKL     ++MPVWS+EE+ KCR V++SH+    V   +   GG+ R    +      ++ + N++ +   VDV        +S V +     ++  K+ H         + Y +  AS Y    + +   E    EL  +  + + +P    M       G +FE  AH  +      G  F + +L+  +       SK  N+   E   FK +    ++D   E+        Y +P    FP IDS
Sbjct:  100 LKARQQVQEFWISLQKACVKNGFLRLRKGDSFLGSPMKGHRILMRESYESILQRIDELLDQGLRRFLITGTPGIGKSFFMFPLMHWLLQKKGVKRIVLEIEDLRYYFCVGESVISGGPQAFE--GVLGDEETWWIMDKAKGREREAY---TVLLSSPSQERCKEFLKLMGCTCLYMPVWSIEEIEKCRTVIYSHLTAGAVADLYEKWGGIPRFVLEKANDVPAQEMLENSIKQCSWVDV--------MSCVYSPETAKEVSHKVLHRHVKPDSGCQKYFMAMASPYVERELLIRGQETKFLELQKYFVQCMSSPATKGM------AGTIFEAFAHKILQ----KGGDFKVRMLHKVK-------SKACNV---ETISFKTSKKIMEFDDLEEVWEKAADGQYCQPRKHNFPAIDS 481          
BLAST of mRNA_P-littoralis_Contig87.56.1 vs. uniprot
Match: A0A397UD55_9GLOM (Uncharacterized protein n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397UD55_9GLOM)

HSP 1 Score: 124 bits (312), Expect = 3.660e-26
Identity = 93/332 (28.01%), Postives = 149/332 (44.88%), Query Frame = 2
Query: 1325 KNISDFAAALTRAVVTEDTLELANGMCFLGKRALGSKLFIRPCYKEMADLILSGEMQNFVVTGTPGIGKSMFGYYLLYLLRCEGKNVVFELKGDWYRFGNEGAQEGTYQEFRRAGFTRDPTAWYLSDPEGSPRENFEGTTTVLVSPDYERIKEFLKLPTSKRIFMPVWSLEELLKCRRVVFSHVLDTDVVKSFGVVGGVARAAFN-----------EEKFELLKDGILNAVGEVDVGLLRQAARLSSVQNRIQTNKIGDKLFHILSNSADNFKGYTVTFASNYTRDSIALGAAERGRDELLAFVGESIRNPDVSRMLGGGSTVGNMFEQAAH 2287
            K++  F   L  A +  + L+L +G  FLG +  G+ L+IR CY  +AD+I + ++    +TG PGIGK+ FGYYLLYLL+ + K +V+     +    N+     +   F    +  +   WY+ D  G P       T +  SP  +  KEF K+  +   FMP WS  E+ +CR  +F+H+    V   +   GG+ R  F            EE        +L+ VGE+D      A  +S     I TN  G++      +   ++    + FAS +  + +     +    +L  FV  S  + + S + G       +FEQ AH
Sbjct:   34 KDLGKFWCFLENAKIDNNFLQLPDGTYFLGDKKQGTILYIRKCYLHLADIIFNEKINRCRITGNPGIGKTFFGYYLLYLLQKQNKTIVYHKARQYPILFNKQYTFRSDNIFDFNEYLDNTDVWYIVD--GQPPLEVHAKTILFCSPQKQHYKEFDKMIGTSIRFMPAWSWNEINECRIGIFNHLEIAKVEDLYSRWGGIPRFVFEKALDSSQQNHLEEAINKCNTRLLDFVGEID-----HADDISHRIVHIHTNLPGEE--EEKEDEETHYVNKFILFASEWVAEKVIDKFEKSYNQQLKNFVTASSSDNEYSTLRG------VIFEQIAH 350          
BLAST of mRNA_P-littoralis_Contig87.56.1 vs. uniprot
Match: A0A397UC44_9GLOM (Uncharacterized protein n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397UC44_9GLOM)

HSP 1 Score: 124 bits (311), Expect = 6.820e-26
Identity = 110/424 (25.94%), Postives = 185/424 (43.63%), Query Frame = 2
Query: 1325 KNISDFAAALTRAVVTEDTLELANGMCFLGKRALGSKLFIRPCYKEMADLILSGEMQNFVVTGTPGIGKSMFGYYLLYLLRCEGKNVVFELKGDWYRFGNEGAQEGTYQEFRRAGFTRDPTAWYLSDPEGSPRENFEGTTTVLVSPDYERIKEFLKLPTSKRIFMPVWSLEELLKCRRVVFSHVLDTDVVKSFGVVGGVARAAFNEEKFELLKDGILNAVGEVD------VGLLRQAARLSSVQNRIQTNKIGDKLFHILSNSADNFKGYT---VTFASNYTRDSIALGAAERGRDELLA-FVGESIRNPDVSRMLGGGSTVGNMFEQAAHLEISGRRTAGAPFNMAILNATRGGFLSGESKIWNLSFNEVQVFKGNGSAFKYDSEIYYRPYSTGFPGIDSFALDSRDDTLYFFQMKYTGAEPI 2566
            K++  F + L  A +  + L+L +G  FLG +  GS L+IR CY  +AD+I   +M+   +TG PGIGK+ FGYYLLY L  + K +V+     +    N+     + + F    +  +   WY+ D  G P       T +  SP  +  KEF K+  ++  FMP+WS  E+ +CR  +F+H+    V   +   GG+ R       +   ++ +  A+ + +      VG +  A  +S     I TN  G++       + D    Y    + FAS +  + + +   ER  ++LL  FV  S+   + + + G       +FE+ AH  +      G  F +  L +            + + FN++          K + + Y +P    F  ID+        TL  FQM  +   PI
Sbjct:   76 KDLGKFWSFLKNAKIDNNFLQLPDGTYFLGDKKQGSILYIRKCYLHLADIIFKEKMRRCRITGNPGIGKTFFGYYLLYFLSKQNKTIVYHKACQFPILFNKQNTFSSDKIFDFYEYLNNRDVWYIVD--GQPPLEVRAKTILFCSPQKQHYKEFDKMVGTEIRFMPIWSWNEINECRIGMFNHLEIAKVEDLYSCWGGIPRFVLENALYSSQQNQLEEAISKCNNRLLDFVGEINHADDISHRIVHIHTNLPGEE-----EENEDEETHYIKKFLLFASEWVAEKV-MDKFERNYNQLLRNFVTASLFENEYNTLQG------VIFERIAHRILQN----GGSFYIRSLESD-----------FTILFNDIN---------KIEEDKYCQPIQKNFSSIDAIVAPH---TL--FQMTVSRNHPI 456          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig87.56.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFB9_9PHAE2.720e-9640.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z6Q5_9STRA4.720e-4730.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KCR9_9PHAE2.040e-3256.78Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7G8Q1_ECTSI5.560e-3284.15Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
A0A6H5JNA3_9PHAE1.000e-3076.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8H3WYS8_GIGMA4.460e-2726.60Putative crinkler family protein n=1 Tax=Gigaspora... [more]
A0A2Z6SBH9_9GLOM1.950e-2624.94Crinkler (CRN) family protein, putative n=1 Tax=Rh... [more]
A0A250X9Q7_9CHLO2.130e-2628.19Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A397UD55_9GLOM3.660e-2628.01Uncharacterized protein n=1 Tax=Gigaspora rosea Ta... [more]
A0A397UC44_9GLOM6.820e-2625.94Uncharacterized protein n=1 Tax=Gigaspora rosea Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig87contigP-littoralis_Contig87:107734..111031 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog109871.XP_006682787.1
Model size3298
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.88e-27
EggNOG OGs2CQRH@1|root,2R5I5@2759|Eukaryota,3A50G@33154|Opisthokonta,3P4XS@4751|Fungi
Descriptionto CRN-like CRN16
Cds size1596
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791743.7359881-UTR-P-littoralis_Contig87:107733..1089161680791743.7359881-UTR-P-littoralis_Contig87:107733..108916Pylaiella littoralis U1_48UTRP-littoralis_Contig87 107734..108916 +
1680791743.764103-UTR-P-littoralis_Contig87:110512..1110311680791743.764103-UTR-P-littoralis_Contig87:110512..111031Pylaiella littoralis U1_48UTRP-littoralis_Contig87 110513..111031 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791743.7524178-CDS-P-littoralis_Contig87:108916..1105121680791743.7524178-CDS-P-littoralis_Contig87:108916..110512Pylaiella littoralis U1_48CDSP-littoralis_Contig87 108917..110512 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig87.56.1prot_P-littoralis_Contig87.56.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig87 108917..110512 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig87.56.1

>prot_P-littoralis_Contig87.56.1 ID=prot_P-littoralis_Contig87.56.1|Name=mRNA_P-littoralis_Contig87.56.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=532bp
MQMPVIFPLCDCCSRLRQRSNFLLINAVPTLLYSALAVSDHLPLAANKNI
SDFAAALTRAVVTEDTLELANGMCFLGKRALGSKLFIRPCYKEMADLILS
GEMQNFVVTGTPGIGKSMFGYYLLYLLRCEGKNVVFELKGDWYRFGNEGA
QEGTYQEFRRAGFTRDPTAWYLSDPEGSPRENFEGTTTVLVSPDYERIKE
FLKLPTSKRIFMPVWSLEELLKCRRVVFSHVLDTDVVKSFGVVGGVARAA
FNEEKFELLKDGILNAVGEVDVGLLRQAARLSSVQNRIQTNKIGDKLFHI
LSNSADNFKGYTVTFASNYTRDSIALGAAERGRDELLAFVGESIRNPDVS
RMLGGGSTVGNMFEQAAHLEISGRRTAGAPFNMAILNATRGGFLSGESKI
WNLSFNEVQVFKGNGSAFKYDSEIYYRPYSTGFPGIDSFALDSRDDTLYF
FQMKYTGAEPIKQGSKVQSFWDAAVASEGVSVKNCVLVFVVPEGTAFEKS
KVLSKCWLPGASTDFLSACGVCVVAIRCLPL*
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mRNA from alignment at P-littoralis_Contig87:107734..111031+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig87.56.1 ID=mRNA_P-littoralis_Contig87.56.1|Name=mRNA_P-littoralis_Contig87.56.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3298bp|location=Sequence derived from alignment at P-littoralis_Contig87:107734..111031+ (Pylaiella littoralis U1_48)
GACCGCGCTGCGCACAAGGGCTAATTCGTACGCGCTCGGTTCAGGCGAGG TCCGTGAAACCCAGTGAGACCACTACCTAACTGGCTGATGGTAATGTCGC TACAAAACTTTCGCTTTCCACGCCTGCGGCAAAATGCAAAAATTGAAAAA TTCGGCAGCGAAGCGTTCACCCTCTCAGCGCCCCCCGAGACGGCAAGGCA GGCCCTGAATTTCAGTCGTCTGGGAAACAGCAGTAGTACCAGGAGCTCAC AGGACACATACCACAGCGGATGAGTAGGCAGTATCTCAGCCTAAGAACGT TCAATGTACGTGTCCGTTCAGCAGCTGTCACGGGTTGAGATCCAAGGCTG AGTCGTGTGTGTTTGCGTGAAGAAAGCACCTTTTGGCAGTCCCGCGCTGA AGAATCCTCTTCTTTTGAGGCAATGAAACAGATTGGATGCTCTTTTTCGT TTTCGCCACTCGCATCAAAGAGACCGTACTCACCCAGTCACCCTTGGTAT GCCGGGTAACAATGACACACATCCGTATGTTTGCTTTATACCGGTGCTGC ACGCATGGCATGCTCGGACATCAGGCGCTGTTTTCCAACCAGGTATGTTG ATACGTAGGTGACAAGCGTTCTCGACCTCAGTATGAACATGATTTTTTTG CCGCGGATCGATGGTGCACGCGGAGACGATCATTTTGGTTAAAACACATA ATTCTAAATGCGAGATCGAGCATTCATATAGTTGAGAACGCACACAGGGA GGAGTAGGTGTCCTTGCTACTTTTTGTTCCATTCCAATAGACCCGAACAG AGTCCTAACCCTCCACATCTGGGATCGAATCGTCTGGTCTTCCCAACGCC CACGAAATAATACCAGATTGTGTGGAACAGCAGTCGAGGAGTAGTCACCT GGTGGCCGGTAGATACCTGTAGAATGTGCGGGGACGAAGACCGATAGTTT TTTGCTGTGCAGTAGCACCTCGATTCCACCTTCGACGCGCACTTACACTA TGGAGGTGCATCATGTGTGCTGCCATGATATTCTTCCGTGCACTCGTGGT TCTACTGAAGTGGGCTACAACAGCAGGGTCCACATTCTTCTAAATTTTCA TAATCATCTTCGTTTGCTGACTCTCAACGAGCTTTTTGATTCGTTCACTG CTCGTGACTTTGGCCAGTCAGGCTATATGCTTGATGCAGATGCCTGTCAT TTTTCCCCTGTGCGATTGCTGTAGTCGGCTTCGCCAGCGAAGTAATTTTT TGCTCATCAACGCTGTCCCAACACTTTTGTATTCCGCCTTGGCCGTCTCT GATCATCTTCCCCTTGCAGCCAACAAGAATATATCGGATTTTGCGGCGGC ATTAACCAGAGCCGTGGTAACTGAGGACACCCTGGAACTCGCAAATGGTA TGTGTTTCCTCGGCAAACGTGCCTTGGGATCCAAGCTGTTCATCCGTCCT TGTTACAAGGAAATGGCGGACCTCATCTTGAGCGGTGAAATGCAGAATTT TGTGGTCACAGGCACTCCTGGAATCGGCAAATCGATGTTCGGATACTATC TTCTGTACCTGCTTCGCTGCGAAGGGAAAAACGTTGTGTTTGAACTGAAG GGCGACTGGTACCGGTTTGGTAACGAAGGGGCGCAAGAAGGAACGTATCA AGAGTTCCGTCGTGCTGGGTTTACCCGGGACCCAACAGCTTGGTATTTGA GTGACCCGGAGGGCTCTCCTAGGGAGAATTTCGAAGGCACAACAACTGTG TTGGTATCGCCTGACTATGAAAGAATTAAGGAGTTTTTGAAGCTACCCAC TTCCAAGCGAATATTCATGCCAGTGTGGAGCCTGGAAGAGCTTCTGAAAT GTCGGCGAGTTGTTTTCTCTCATGTGCTAGATACCGACGTGGTGAAGTCT TTCGGTGTAGTTGGAGGTGTGGCACGAGCAGCCTTTAACGAGGAGAAGTT TGAGCTTCTCAAAGATGGTATATTGAACGCGGTGGGCGAAGTAGATGTGG GTTTGCTGAGACAGGCAGCTAGGCTTTCGAGCGTGCAGAACAGGATTCAA ACCAATAAGATAGGTGATAAGCTGTTCCATATCTTGTCGAACTCTGCCGA TAATTTCAAAGGCTATACGGTCACGTTCGCCAGCAATTACACGCGTGATT CGATTGCACTAGGAGCTGCCGAGAGGGGAAGAGATGAACTGCTAGCCTTT GTGGGGGAATCTATCCGCAACCCAGATGTTTCCAGAATGCTTGGAGGAGG AAGTACGGTTGGCAACATGTTCGAACAAGCTGCACACCTCGAAATCAGTG GGCGCCGAACCGCCGGAGCACCGTTTAATATGGCAATCCTCAACGCTACA CGTGGTGGGTTTCTATCGGGGGAGAGCAAAATATGGAATTTAAGTTTCAA CGAAGTACAGGTATTCAAGGGCAACGGCTCTGCTTTCAAGTATGACAGCG AGATCTACTACAGACCATACAGTACGGGATTTCCAGGGATTGATTCGTTC GCTTTGGACAGTCGTGATGATACTTTGTACTTTTTTCAAATGAAGTATAC AGGCGCAGAGCCTATCAAGCAAGGATCTAAAGTACAGAGTTTCTGGGACG CAGCTGTTGCATCCGAGGGTGTATCAGTCAAGAACTGTGTTCTAGTTTTC GTTGTCCCAGAGGGCACCGCATTTGAGAAGTCGAAGGTGTTGAGCAAGTG TTGGCTGCCGGGAGCAAGTACTGATTTTCTGTCCGCGTGTGGTGTATGTG TTGTTGCAATTAGATGTTTGCCGTTGTAGTCCTTCGGAAGATTTTAAAAC ATATGGCACTGTTTCGGCAGTAGAATGCAGCACGGCGTTATTGTTTCGGC GGTACTTGTAGGCGGGTTATTGTTTTTGGCAGCAGCGACTTGGGAAGGTA GAGCCCACAACGATAAAACGTTGGTGATTTCGGCTGTTAAGTCGGTGTGT GTGATGTGCACGCGGTAAGGGTCACGTTCGAAGAGGTGCAATATCTGGAC GATGACACGAGTACTGTTCATGACGGTGAAACAGGGACACCGCTTCGTGC GAAAAGGTCTTATAAAGAAAAACGAGCTGATCGATTGTCTTCACGAAAGC GTGCAAGCGCCTTTCTGTCCTCAAAGCTGAAGAAGCCAGGCTTGATGCCA TGATTGTTGAACGTGTTTAGATTAAGACCATCCTCGAAAGGGGCAAGCTT TACACCGTGACTGCCGACCTGGCTTAGTTTGTTTCATTTCAACGACTTGA TTGCCACACTCTTCATCCAACGTATCGTTCCCGCCATTGCCGCTCACC
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Coding sequence (CDS) from alignment at P-littoralis_Contig87:107734..111031+

>mRNA_P-littoralis_Contig87.56.1 ID=mRNA_P-littoralis_Contig87.56.1|Name=mRNA_P-littoralis_Contig87.56.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1596bp|location=Sequence derived from alignment at P-littoralis_Contig87:107734..111031+ (Pylaiella littoralis U1_48)
ATGCAGATGCCTGTCATTTTTCCCCTGTGCGATTGCTGTAGTCGGCTTCG
CCAGCGAAGTAATTTTTTGCTCATCAACGCTGTCCCAACACTTTTGTATT
CCGCCTTGGCCGTCTCTGATCATCTTCCCCTTGCAGCCAACAAGAATATA
TCGGATTTTGCGGCGGCATTAACCAGAGCCGTGGTAACTGAGGACACCCT
GGAACTCGCAAATGGTATGTGTTTCCTCGGCAAACGTGCCTTGGGATCCA
AGCTGTTCATCCGTCCTTGTTACAAGGAAATGGCGGACCTCATCTTGAGC
GGTGAAATGCAGAATTTTGTGGTCACAGGCACTCCTGGAATCGGCAAATC
GATGTTCGGATACTATCTTCTGTACCTGCTTCGCTGCGAAGGGAAAAACG
TTGTGTTTGAACTGAAGGGCGACTGGTACCGGTTTGGTAACGAAGGGGCG
CAAGAAGGAACGTATCAAGAGTTCCGTCGTGCTGGGTTTACCCGGGACCC
AACAGCTTGGTATTTGAGTGACCCGGAGGGCTCTCCTAGGGAGAATTTCG
AAGGCACAACAACTGTGTTGGTATCGCCTGACTATGAAAGAATTAAGGAG
TTTTTGAAGCTACCCACTTCCAAGCGAATATTCATGCCAGTGTGGAGCCT
GGAAGAGCTTCTGAAATGTCGGCGAGTTGTTTTCTCTCATGTGCTAGATA
CCGACGTGGTGAAGTCTTTCGGTGTAGTTGGAGGTGTGGCACGAGCAGCC
TTTAACGAGGAGAAGTTTGAGCTTCTCAAAGATGGTATATTGAACGCGGT
GGGCGAAGTAGATGTGGGTTTGCTGAGACAGGCAGCTAGGCTTTCGAGCG
TGCAGAACAGGATTCAAACCAATAAGATAGGTGATAAGCTGTTCCATATC
TTGTCGAACTCTGCCGATAATTTCAAAGGCTATACGGTCACGTTCGCCAG
CAATTACACGCGTGATTCGATTGCACTAGGAGCTGCCGAGAGGGGAAGAG
ATGAACTGCTAGCCTTTGTGGGGGAATCTATCCGCAACCCAGATGTTTCC
AGAATGCTTGGAGGAGGAAGTACGGTTGGCAACATGTTCGAACAAGCTGC
ACACCTCGAAATCAGTGGGCGCCGAACCGCCGGAGCACCGTTTAATATGG
CAATCCTCAACGCTACACGTGGTGGGTTTCTATCGGGGGAGAGCAAAATA
TGGAATTTAAGTTTCAACGAAGTACAGGTATTCAAGGGCAACGGCTCTGC
TTTCAAGTATGACAGCGAGATCTACTACAGACCATACAGTACGGGATTTC
CAGGGATTGATTCGTTCGCTTTGGACAGTCGTGATGATACTTTGTACTTT
TTTCAAATGAAGTATACAGGCGCAGAGCCTATCAAGCAAGGATCTAAAGT
ACAGAGTTTCTGGGACGCAGCTGTTGCATCCGAGGGTGTATCAGTCAAGA
ACTGTGTTCTAGTTTTCGTTGTCCCAGAGGGCACCGCATTTGAGAAGTCG
AAGGTGTTGAGCAAGTGTTGGCTGCCGGGAGCAAGTACTGATTTTCTGTC
CGCGTGTGGTGTATGTGTTGTTGCAATTAGATGTTTGCCGTTGTAG
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