prot_P-littoralis_Contig120.92.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig120.92.2
Unique Nameprot_P-littoralis_Contig120.92.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length248
Homology
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BLAST of mRNA_P-littoralis_Contig120.92.2 vs. uniprot
Match: A0A6H5KRI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRI1_9PHAE)

HSP 1 Score: 301 bits (771), Expect = 6.340e-101
Identity = 166/218 (76.15%), Postives = 168/218 (77.06%), Query Frame = 0 
Query:    1 MDMDTATVSTPARQSLGTRPAVTPTQSAKKDEDERRKRRTSGPRAVGTDAQQATPDLTKGNGPNYPRGFQPRREGSDGAKLPVYMFLQQGVLEEGVQEHCTAGVHARVARWWSSNADSNEDRAFTGNCTSTGKILAAVVK--------DEDLACYYGLKKSFSGRSTTWVLSRSSLARERADAQWSFCLPAGWAEEYGADGSWKFKTSKGGTPVSDIL 210
            MDMDTATVSTPARQSLGTRPAVTPTQSAKKDEDERRKRRTSGPRAVGTDAQQAT D TKGNGPNYP GF+P REGSDGAKLPVYMFLQQG LEEGVQEH TA VHA VARWWSS ADSNEDRAFTGN TSTGKILA+VVK        DEDLA YYGLKKSFSG                            WAEEY ADGSWKFKTSKGGTPVS  L
Sbjct:   22 MDMDTATVSTPARQSLGTRPAVTPTQSAKKDEDERRKRRTSGPRAVGTDAQQATHDSTKGNGPNYPCGFKPGREGSDGAKLPVYMFLQQGALEEGVQEHTTAEVHAHVARWWSSYADSNEDRAFTGNRTSTGKILASVVKADLYIPRQDEDLAFYYGLKKSFSG----------------------------WAEEYSADGSWKFKTSKGGTPVSVSL 211
[Close]
BLAST of mRNA_P-littoralis_Contig120.92.2 vs. uniprot
Match: A0A6H5K1G6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1G6_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 1.860e-55
Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0 
Query:    1 MDMDTATVSTPARQSLGTRPAVTPTQSAKKDEDERRKRRTSGPRAVGTDAQQATPDLTKGNGPNYPRGFQPRREGSDGAKLPVYMFLQQGVLEEGVQEHCT 101
            MDMDTATVSTPARQSLGTRPAVTPTQSAKKDEDERRKRRTSGPRAVGTDAQQAT D TKGNGPNYPRGF+P REGSDGAKLPVYMFLQQG LEEGVQEH T
Sbjct:   22 MDMDTATVSTPARQSLGTRPAVTPTQSAKKDEDERRKRRTSGPRAVGTDAQQATHDSTKGNGPNYPRGFKPGREGSDGAKLPVYMFLQQGALEEGVQEHTT 122
[Close]
BLAST of mRNA_P-littoralis_Contig120.92.2 vs. uniprot
Match: A0A6H5K994_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K994_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 6.640e-15
Identity = 44/74 (59.46%), Postives = 52/74 (70.27%), Query Frame = 0 
Query:  140 KDEDLACYYGLKKSFSGRSTTWVLSRSSLARERADAQWSFC--LPAGWAEEYGADGSWKFKTSKGGTPVSDILE 211
            +DEDLA YYGL+K  S + T WVLSRSSL  ERA+A  SF   LPAGW EE+G D SW FK +  GTPV+  +E
Sbjct:   63 RDEDLAQYYGLRK-VSSKPTKWVLSRSSLGEERAEAHISFGFGLPAGWCEEFGPDHSWTFKKTHDGTPVAISVE 135
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig120.92.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KRI1_9PHAE6.340e-10176.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1G6_9PHAE1.860e-5594.06Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K994_9PHAE6.640e-1559.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig120contigP-littoralis_Contig120:510460..511857 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig120.92.2mRNA_P-littoralis_Contig120.92.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig120 510456..512077 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig120.92.2 ID=prot_P-littoralis_Contig120.92.2|Name=mRNA_P-littoralis_Contig120.92.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=248bp
MDMDTATVSTPARQSLGTRPAVTPTQSAKKDEDERRKRRTSGPRAVGTDA
QQATPDLTKGNGPNYPRGFQPRREGSDGAKLPVYMFLQQGVLEEGVQEHC
TAGVHARVARWWSSNADSNEDRAFTGNCTSTGKILAAVVKDEDLACYYGL
KKSFSGRSTTWVLSRSSLARERADAQWSFCLPAGWAEEYGADGSWKFKTS
KGGTPVSDILEMRFAHIRGWNGVSQGSYGVSGGSSWNARRYLSAVPR*
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