mRNA_P-littoralis_Contig869.2.4 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig869.2.4 vs. uniprot
Match: D7FWS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS4_ECTSI) HSP 1 Score: 659 bits (1701), Expect = 5.100e-214 Identity = 370/552 (67.03%), Postives = 437/552 (79.17%), Query Frame = 1
Query: 589 VMNRDLPTHAPASSIVD-ERPGTVAAGAMSVLALIGVLVVSTGSIIRSNQGSSSGTXXXXXXXXXXXXXXXXXSDEGSRGFAGTLGVLAPVRGSSERDIANRASKRRPSATLAIVLMTQLQFLATLSLVDSTVTEDSWLADFVIGLRWINLWWPAKIGEDIGSEECVFDAGASEIGALVFVGNLVLVVGILLGVLVLHIVIVSGVEALWLTKKRARENLEAARLRATPAGELRARYKGGKVLRRTTPALDGPSPFVSQGSQGSPGFPLVDECKDDSNDEEEGKEQGLVPMRHKSRLNPVAACREQSTSVWVHFPHVELVILFFAFEGAVASFASAMRHSECPEIFYTALTAMALYPLLMFVMVFRTLWVRIFPDVLLIFKPYDNDRS---APNNRGGFLSRFKSSWTEDYSLFSWADKGQWETVQTENRQLSREGDRFRIGFEPVFVDYTKRGTCFVMISLVEWASIALVGVLIDNSVVQLLAFCGIHVVMFVILVCLKPFANSIINNIGAGVMAIDAVCMGLLAVAATVWEGTSRVGHISTAVIALQLFTL 2232
V + +L T AP I + ERPGT AAGA+S+LALIG+LVVSTGS+IRSN+G+ S XXXXXXXXXXXXXXX G +GT+ L P G++E + AS RRPSATLA VLMTQLQFLATLSLVD + EDSWLADFV GLRWINLWWPA++G++I S+EC F+AGAS IGALVFVGNL LV+GILL + +H+ VSGVEALWLTKKRARENL+AAR R P GEL+AR +GG+++ RT P L PSPF Q Q S + E + D +DEEEG +GLVPMR ++RL+PVA CRE STS W+HFPHVELV LFFAFEGAVASFASA+R+SECPEIFYTA+ AM LYPLLMFV VFRTL VR+ P+VLLIFK Y D + AP+ GG LSRFKSSW E+YSLFSWADKGQWETVQT +RQ+SREGD FRIGFEPVFVDYTKRGT F++ISLVEWA+ A VGV+I+NSVVQL+ FCG+H VMF IL+ LKPFANS+INNI A V AIDA+ MG+ A +A WEGT+R H++T+V+ LQL +L
Sbjct: 1093 VADSELVTPAPVDIIAEVERPGTTAAGAVSILALIGILVVSTGSVIRSNRGNGSXXXXXXXXXXXXXXXXX--------GLSGTVDPLTPADGTAEGENPPHASNRRPSATLAFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWPAEVGQNIASDECAFEAGASGIGALVFVGNLALVIGILLAIFFMHVAAVSGVEALWLTKKRARENLDAARRRGAPIGELQARLRGGRIICRTNPDLADPSPFARQAPQPSGTPSTLHEEESDMSDEEEGG-RGLVPMRSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAEDGTNGDAPSRAGGLLSRFKSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWAAFAFVGVMIENSVVQLVLFCGLHSVMFFILMFLKPFANSVINNIEACVTAIDAISMGVFAASALWWEGTNRAAHLNTSVVVLQLLSL 1635
BLAST of mRNA_P-littoralis_Contig869.2.4 vs. uniprot
Match: A0A6H5JD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE) HSP 1 Score: 664 bits (1713), Expect = 4.720e-209 Identity = 352/535 (65.79%), Postives = 412/535 (77.01%), Query Frame = 1
Query: 640 ERPGTVAAGAMSVLALIGVLVVSTGSIIRSNQGSSSGTXXXXXXXXXXXXXXXXXSDEGSRGFAGTLGVLAPVRGSSERDIANRASKRRPSATLAIVLMTQLQFLATLSLVDSTVTEDSWLADFVIGLRWINLWWPAKIGEDIGSEECVFDAGASEIGALVFVGNLVLVVGILLGVLVLHIVIVSGVEALWLTKKRARENLEAARLRATPAGELRARYKGGKVLRRTTPALDGPSPFVSQGSQGSPGFPLVDECKDDSNDEEEGKEQGLVPMRHKSRLNPVAACREQSTSVWVHFPHVELVILFFAFEGAVASFASAMRHSECPEIFYTALTAMALYPLLMFVMVFRTLWVRIFPDVLLIFKPYDNDRS---APNNRGGFLSRFKSSWTEDYSLFSWADKGQWETVQTENRQLSREGDRFRIGFEPVFVDYTKRGTCFVMISLVEWASIALVGVLIDNSVVQLLAFCGIHVVMFVILVCLKPFANSIINNIGAGVMAIDAVCMGLLAVAATVWEGTSRVGHISTAVIALQLFTLC 2235
E PGT+AAGA+S+ ALIG++VVSTGSI+RSN G+ S S +GSRG T G +APV + E D R S RRPSATLA VLMTQLQFLA LSLVD V++ SWLADFV+GLRWINLWWPA IGEDI S+ C+F+ GASEIGALVFVGNL LV+GILL + LH+ +VSG EALWLTKKRARENL+ AR R TP EL AR++GG+++R+T P L PSPF S+ LV + +++EE G+E LVPM ++RL+PVA CRE STS W+HFPHVELV LFFAFEGAVASFASA+R+SECPE+FYTA+ AM LYPLLMF V RTL+VR+ PD LLIFK YD D + PN RGGFLSRFKSSW E+YSLFSWADKGQWETVQT NR ++REGD FRIGFEPVFVDYTKRGT F++ISLVEWASIALVGV+IDNS VQLL FCG+ MF+ILVCLKPFANS+IN IGA ++AIDAVC GLLAVAA WEGTSR +++AV LQ+ +LC
Sbjct: 1341 ESPGTIAAGAVSIFALIGIMVVSTGSIVRSNHGNGS---------VSSAGGAGGASADGSRGLVDTAGAIAPVGETGEGDSPPRVSHRRPSATLAFVLMTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPADIGEDIASDGCIFETGASEIGALVFVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRIIRQTNPGLTDPSPFASRNPS------LVRDGSQRTDEEEGGRE--LVPMCSENRLSPVAMCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNTPNGRGGFLSRFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSYVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVCTGLLAVAALKWEGTSRATDVNSAVGVLQIVSLC 1858
BLAST of mRNA_P-littoralis_Contig869.2.4 vs. uniprot
Match: A0A6H5JR60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR60_9PHAE) HSP 1 Score: 608 bits (1568), Expect = 3.380e-206 Identity = 331/548 (60.40%), Postives = 403/548 (73.54%), Query Frame = 1
Query: 610 THAPASSIVD-ERPGTVAAGAMSVLALIGVLVVSTGSIIRSNQGSSSGTXXXXXXXXXXXXXXXXXSDEGSRGFAGTLGVLAPVRGSSERDIANRASKRRPSATLAIVLMTQLQFLATLSLVDSTVTEDSWLADFVIGLRWINLWWPAKIGEDIGSEECVFDAGASEIGALVFVGNLVLVVGILLGVLVLHIVIVSGVEALWLTKKRARENLEAARLRATPAGELRARYKGGKVLRRTTPALDGPSPFVSQGSQGSPGFPLVDECKDDSNDEEEGKEQGLVPMRHKSRLNPVAACREQSTSVWVHFPHVELVILFFAFEGAVASFASAMRHSECPEIFYTALTAMALYPLLMFVMVFRTLWVRIFPDVLLIFKPY---DNDRSAPNNRGGFLSRFKSSWTEDYSLFSWADKGQWETVQTENRQLSREGDRFRIGFEPVFVDYTKRGTCFVMISLVEWASIALVGVLIDNSVVQLLAFCGIHVVMFVILVCLKPFANSIINNIGAGVMAIDAVCMGLLAVAATVWEGTSRVGHISTAVIALQLFTLCGE 2241
T AP I + ERPGT AAGA+++LALIG+LV+STGS+IRSN+G+ S A ++ LAP G++ER+ AS RRPSATL VLMTQLQFLATLSLVD + EDSWLADFV GLRWINLWW A++G++I S+E F+AGAS I ALVFVGN+ LV GILL + +H+ VSGVEALWLTKK ARENL+AAR R P GEL+AR +G +++ RT P L PSPF Q S ++E + D +DEEEG +G VPMR ++RLNPVA CRE STS W+HFPHVELV FFAFEGAVASFASA+R+ ECP+IFYTA+ AM L PLLMFV VFRTL VR+ P+VLLIFK Y AP+ GGFLSRFKSSW E+YSLFSWADK QWET QT +RQ+SREGD RIGFEPVFV+YTKRGT F++ISLVEW ++ALVGV+++NS+VQL+ FCG+ V+F+IL+ LKPFANS+ NNI A V AIDA+ MG+ A +A WEGT R H++T+V+ LQL +L E
Sbjct: 119 TPAPVDIIAEVERPGTTAAGAVTILALIGILVISTGSVIRSNRGNDSSASCGSGSGDSFLGAPVAFR-------ARSVDALAPADGTAERENPPPASNRRPSATLTFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWLAEVGQNIASDESAFEAGASGIRALVFVGNVALVKGILLAIFFIHVAAVSGVEALWLTKKPARENLDAARRRGAPIGELQARLRGVRIICRTNPDLADPSPFSRQAPHASGTLSTLNEEESDMSDEEEGG-RGRVPMRSENRLNPVATCREHSTSAWLHFPHVELVFQFFAFEGAVASFASAIRNYECPKIFYTAIAAMVLCPLLMFVTVFRTLLVRVRPNVLLIFKTYAEGGTSGDAPSRAGGFLSRFKSSWEENYSLFSWADKRQWETAQTPDRQISREGDWCRIGFEPVFVEYTKRGTWFIVISLVEWVALALVGVMVENSIVQLVLFCGLPSVIFLILMFLKPFANSVTNNIEACVTAIDAISMGVFAASALWWEGTDRAAHLNTSVVVLQLLSLFDE 658
BLAST of mRNA_P-littoralis_Contig869.2.4 vs. uniprot
Match: D8LLG6_ECTSI (Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI) HSP 1 Score: 632 bits (1629), Expect = 1.180e-197 Identity = 357/535 (66.73%), Postives = 414/535 (77.38%), Query Frame = 1
Query: 640 ERPGTVAAGAMSVLALIGVLVVSTGSIIRSNQGSSSGTXXXXXXXXXXXXXXXXXSDEGSRGFAGTLGVLAPVRGSSERDIANRASKRRPSATLAIVLMTQLQFLATLSLVDSTVTEDSWLADFVIGLRWINLWWPAKIGEDIGSEECVFDAGASEIGALVFVGNLVLVVGILLGVLVLHIVIVSGVEALWLTKKRARENLEAARLRATPAGELRARYKGGKVLRRTTPALDGPSPFVSQGSQGSPGFPLVDECKDDSNDEEEGKEQGLVPMRHKSRLNPVAACREQSTSVWVHFPHVELVILFFAFEGAVASFASAMRHSECPEIFYTALTAMALYPLLMFVMVFRTLWVRIFPDVLLIFKPYDNDRS---APNNRGGFLSRFKSSWTEDYSLFSWADKGQWETVQTENRQLSREGDRFRIGFEPVFVDYTKRGTCFVMISLVEWASIALVGVLIDNSVVQLLAFCGIHVVMFVILVCLKPFANSIINNIGAGVMAIDAVCMGLLAVAATVWEGTSRVGHISTAVIALQLFTLC 2235
E PGT AAGA+S+ ALIG++VVSTGSI+RSN G+ S + XXXXXXXXXXXXXXX E D +R S RRPSATLA VLMTQLQFLA LSLVD V++ SWLADFV+GLRWINLWWPA+IGEDI S+ C+F+ GASEIGALVFVGNL LV+GILL + LH+ +VSG EALWLTKKRARENL+ AR R TP EL AR++GG+++RRT P L PSPF S+ P + + DEEEG +GLVPM +++L+PVA CRE STS W+HFPHVELV LFFAFEGAVASFASA+R+SECPE+FYTA+ AM LYPLLMF V RTL+VR+ PD LLIFK YD D + APN RGGFLS FKSSW E+YSLFSWADKGQWETVQT NR ++REGD FRIGFEPVFVDYTKRGT F++ISLVEWASIALVGV+IDNS VQLL FCG+ MF+ILVCLKPFANS+IN IGA ++AIDAV GLLAVAA WEGTSR +++AV LQ+ +LC
Sbjct: 1300 ESPGTTAAGAVSIFALIGIMVVSTGSIVRSNHGNGSVSSAXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXEGDSPSRVSHRRPSATLAFVLMTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPAEIGEDIVSDGCIFETGASEIGALVFVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRMIRRTNPGLTDPSPFGSRN-------PSLVRDRSQRTDEEEGG-RGLVPMCSENQLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNAPNCRGGFLSHFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSNVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVSTGLLAVAALKWEGTSRATDVNSAVGVLQIVSLC 1817
BLAST of mRNA_P-littoralis_Contig869.2.4 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI) HSP 1 Score: 351 bits (901), Expect = 4.320e-108 Identity = 206/466 (44.21%), Postives = 290/466 (62.23%), Query Frame = 1
Query: 895 SKRRPSATLAIVLMTQLQFLATLSLVDSTVTEDSWLADFVIGLRWINLWWPAKIGEDI-----------GSEECVFD-AGASEIGALVFVGNLVLVVGILLGVLVLHIVIVSGVEALWLTKKRARENLEAARLRATPAGELRARYKGGKVLRRTTPALDGPSPFVSQGSQGSPGFPLVDECKDDSNDEEEGKEQGLVPMRHKSR--LNPVAACREQSTSVWVHFPHVELVILFFAFEGAVASFASAMRHSECPEIFYTALTAMALYPLLMFVMVFRTLWVRIFPDVLLIFKP------YDNDRSAPNNRGGFLSRFKSSWTEDYSLFSWADKGQWETVQTENRQLSREGDRFRIGFEPVFVDYTKRGTCFVMISLVEWASIALVGVLIDNSVVQLLAFCGIHVVMFVILVCLKPFANSIINNIGAGVMAIDAVCMGLLAVAATVWEGTSRVGHISTAVIALQLFTL 2232
S R PS T+A++L+TQ+QFLATLSLVDST EDS L++ LRW+NLW P +G GS C + AS+IGALVF+GN+ L +LLG++V+HIV+VS VEA WL+K+RA E L A+ R P L AR + +V D P S + G + DS D E+ +P+R + + +A CR +S+SVW++FPH+EL+ L FAFEGA+AS + MR CP +FY+A ++ +YP+LM ++ +RT VR+ PD L++FKP + D + P + FLS+ ++ ED+S+F+WA+ G WETV+T + + REGD+FRIGFEP+FVD+TK+ + F + L+E IA VL+D+SVVQL FCG+H + F++LV +PFANSIIN +GA + IDA M +LA A W+ TSR + TAV+ LQL L
Sbjct: 44 SVRAPSVTIAVLLLTQIQFLATLSLVDSTGAEDSLLSELTQNLRWVNLWPPDSVGRTFSSGGERLFQQDGSRACGIEPTSASDIGALVFLGNIGLFTSLLLGIVVIHIVLVSAVEAYWLSKERAMEELTKAQRRGIPIRGLGAR-RASRVAHSPDAESD---PDELAASASNDGAMSREHAAADSVDVGVDFEEDGIPIRSRPKGLRAMLADCRYRSSSVWLYFPHIELLFLLFAFEGAMASQLATMRGGGCPWVFYSACASLVVYPVLMIILSYRTHRVRVAPDTLIVFKPVGEEENHGTDGTVPRS---FLSKVRTGLKEDHSMFAWANTGAWETVETPDEETVREGDQFRIGFEPLFVDFTKKASWFTVYFLLEMTGIACTAVLVDDSVVQLFLFCGLHSLSFLLLVIFRPFANSIINTMGACLTLIDAASMAMLADTAHRWQRTSRAKRMDTAVVVLQLVAL 502
BLAST of mRNA_P-littoralis_Contig869.2.4 vs. uniprot
Match: D8LN93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN93_ECTSI) HSP 1 Score: 360 bits (925), Expect = 4.650e-105 Identity = 231/530 (43.58%), Postives = 293/530 (55.28%), Query Frame = 1
Query: 913 ATLAIVLMTQLQFLATLSLVDSTVTEDSWLADFVIGLRWINLWWPAKIGE------DIGSEE-------------CVFDAGASEIGALVFVGNLVLVVGILLGVLVLHIVIVSGVEALWLTKKRARENLEAARLRA---------------------TPAGELRARYKGGKV------------LRRTT-----------------PALDGP--SPFVSQGSQGSPGFPLVDECKDDS--------NDEEEGKEQGLVPMRHKSRLNPVAACREQSTSVWVHFPHVELVILFFAFEGAVASFASAMRHSECPEIFYTALTAMALYPLLMFVMVFRTLWVRIFPDVLLIFKPYDNDRSAPN----------NRGGFLSRFKSSWTEDYSLFSWADKGQWETVQTENRQLSREGDRFRIGFEPVFVDYTKRGTCFVMISLVEWASIALVGVLIDNSVVQLLAFCGIHVVMFVILVCLKPFANSIINNIGAGVMAIDAVCMGLLAVAATVWEGTSRVGHISTAVIALQLFTLC 2235
A L V +TQLQFLATLSLVD T EDS L F RW NLW PA E D G + C +D +G+LVF+GN LV G L+ + +LH+ +VSGVEA WL KKRA+E EAAR R P E AR GG LRR PALD P S V GS + + DD+ DEE G G + R +SRL+PVA CRE S S W+HFPHVELV LFFA+EGAVAS SA+R + CP + A A+ YP+LMFV V RT +VR+ P+ L++F P + D + FLS+ ++ W ED+SLF+WA+KG WET +T+N REG FRIGFEP+FVD+TK G FV +LVEWA++ +G LID SV+QL FC +H + F++LV +PFANS+IN +GAG++ IDAVCM LLAV+A+ WEGT+ G + + V+ LQLF LC
Sbjct: 758 AILGAVAVTQLQFLATLSLVDDTGGEDSSLPGFADSFRWANLWPPASFAEEFIDTSDEGQQRRLXXXXXXXXXXGCSWDGSLGGLGSLVFIGNQGLVFGALVLIFLLHVSLVSGVEAYWLAKKRAKE--EAARARRLGVSIGEYFSDTHVDGREHEQAPVPEPDARPSGGTTDISVASSFRRRRLRRDPSLLNAAATGSQRRLEKLPALDAPHRSRKVRDGSWVAEDGEKKEARSDDNLSGTDCSDYDEEGGGGLGTL-TRAESRLSPVAECREHSRSAWLHFPHVELVFLFFAYEGAVASQVSALREAGCPPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTLIVFTPKEADDDTGDAGDAEEGQRARSASFLSKVRAGWEEDHSLFAWANKGTWETAETDNEGTRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANSVINAMGAGLVGIDAVCMALLAVSASRWEGTAAAGKVDSVVMLLQLFALC 1284
BLAST of mRNA_P-littoralis_Contig869.2.4 vs. uniprot
Match: A0A6H5J9C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C2_9PHAE) HSP 1 Score: 316 bits (810), Expect = 1.010e-93 Identity = 195/471 (41.40%), Postives = 273/471 (57.96%), Query Frame = 1
Query: 883 ANRASKRRPSATLAIVLMTQLQFLATLSLVDSTVTEDSWLADFVIGLRWINLWWPAKIGEDIGSE-----------------ECVFDAGASEIGALVFVGNLVLVVGILLGVLVLHIVIVSGVEALWLTKKRARENLEAARLRATPAGELRARYKGGKVLRRTTPALDGPSPFVSQGSQGSPGFPLVDECK--------DDSNDEEEGKEQGLVPMRHKSRLNPVAACREQSTSVWVHFPHVELVILFFAFEGAVASFASAMRHSECPEIFYTALTAMALYPLLMFVMVFRTLWVRIFPDVLLIFKPYDNDRSAPNNRGGFLSRFKSSWTEDYSLFSWADKGQWETVQTENRQLSREGDRFRIGFEPVFVDYTKRGTCFVMISLVEWASIALVGVLIDNSVVQLLAFCGIHVVMFVILVCLKPFANSIINNIGAGVMAIDAVCMGLLAVAATVWEGTSRVGHISTAVIALQ 2220
A +++ R PSAT+A VL +Q+QFLATLS VD+T E+S +D LRW+NLW E I S + S +G+L+F+GNL L G+L+ + H+++ S VEA W+ K+RAR+ + + R E+ G + P +D S SQ S G P E + D +DEEEG G R + + V+ CRE S S W+H+PH+EL+ LFFAFEGAV S +A+R + I Y A+ + LYPLLM VMV RT V + PD L++F + + + + LSR S D+SLFSWADKGQWETVQT N + R+ D FRIGFEP+F D+T+ G+ F++ +L+E A +A + VL+DNS +Q L FC +H + FV+LV KPFANS++N + A VM DAVCMG+LA+AA + GT+ + TAV+ +Q
Sbjct: 136 ATQSTCRSPSATMAFVLTSQIQFLATLSFVDTTGAEESAFSDLTNNLRWVNLWPSESFSEGIASRIISDEPDQPSDEDDTTPSAISQTVTSNVGSLLFMGNLALFSGLLVIIFTSHVLVASVVEAYWVAKQRARKVISRSLRRGLSLSEIPIALSGTWSQQ---PTMDDGSSAGSQ-SSGIMQSPQRMERQAVSPYDGGDSKSDEEEG---GPRNTRPGNSIGQVSDCRELSQSPWLHYPHLELIFLFFAFEGAVTSQMAALRSANSSTILYAAVATLVLYPLLMVVMVARTHRVWVQPDALIVFASSETEEALAG-KPSTLSRTVSGLKNDFSLFSWADKGQWETVQTANDKARRKADWFRIGFEPLFADFTQAGSWFIIYTLIECAVLASIAVLVDNSAMQFLLFCAMHSLTFVLLVGWKPFANSVLNAVAAMVMLTDAVCMGMLALAAGTFNGTATAARMDTAVMVIQ 598
BLAST of mRNA_P-littoralis_Contig869.2.4 vs. uniprot
Match: D8LN89_ECTSI (Liver stage antigen 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN89_ECTSI) HSP 1 Score: 297 bits (761), Expect = 3.090e-82 Identity = 195/503 (38.77%), Postives = 276/503 (54.87%), Query Frame = 1
Query: 832 GTLGVLAPVRGSSERDIANRASKRRPSATLAIVLMTQLQFLATLSLVDSTVTEDSWLADFVIGLRWINLWWPAKI----------------GEDIGSE--------------ECVFDAGASEIGALVFVGNLVLVVGILLGVLVLHIVIVSGVEALWLTKKRARENLEAARLRATPAGELRARYKGGKVLRRTTPALDGPSPFVSQGSQGSPGFPLVDECKDDSNDEEE-GKEQGLVPMRHKSRLNPVAACREQSTSVWVHFPHVELVILFFAFEGAVASFASAMRHSECPEIFYTALTAMALYPLLMFVMVFRTLWVRIFPDVLLIFKPYDNDRSAPNNR-----GGFLSRFKSSWTEDYSLFSWADKGQWETVQTENRQLSREGDRFRIGFEPVFVDYTKRGTCFVMISLVEWASIALVGVLIDNSVVQLLAFCGIHVVMFVILVCLKPFANSIINNIGAGVMAIDAVCMGLLAVAATVWEGTSRVGHISTAVIALQLFTL 2232
G G+ A G + + + +S RRPS T+AIV + QLQFLATLSLV +T TEDS L DF LRWINLW PA GED E V + + ++ + VFVGNLVL + IL + ++HI + SG+EA WL K+ A +++ A+ R P EL AR L P S+ DD + ++ E+G+ +S+L+ +A CRE+S SVW+HFPHVEL+ L FAFEGAVA+ SA+R + + A+ A+ +P+LM V T + +I ++F P +D + F S+ + E YS+F+W++KG+WE+V T + + R D FRIGFEP+FVD+T G+ F + +L+E + A+VGV++DNSV+QL F + V F++LV LKPFAN IIN +GA V IDA CM +LAV A W GT R + + V+ +QL TL
Sbjct: 2161 GNAGIAAG--GQTGAGLQDSSSIRRPSTTMAIVALGQLQFLATLSLVGNTGTEDSKLYDFANNLRWINLWPPASFARSFTPASMYGELDQEGEDAXXXXXXXXXXXXXXXXXEGVENEESGDLSSGVFVGNLVLFLIILFIIFLIHITVASGIEAYWLAKRGAEKHVARAQRRGVPVRELSAR-------------LSNPWAPFDPNSESQRSLRTAKTSGDDEGEADDTDAEEGMPETVGRSKLSKIAECRERSQSVWLHFPHVELMYLLFAFEGAVAAQVSAIRENATLLVLILAVLALLFFPVLMTFNVMCTFFGKIRSKKHIVFIPNADDAVEAESDLYTSVRSFGSKVRRGLKESYSMFAWSNKGEWESVDTPDEEDKRARDWFRIGFEPLFVDFTGAGSWFAVYALIELVANAVVGVVVDNSVLQLSLFGAFNTVSFLLLVVLKPFANGIINFMGAAVYGIDAACMAVLAVTADKWGGTERASQVDSVVVIVQLLTL 2648
BLAST of mRNA_P-littoralis_Contig869.2.4 vs. uniprot
Match: A0A6H5JTJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ3_9PHAE) HSP 1 Score: 275 bits (704), Expect = 6.570e-75 Identity = 179/479 (37.37%), Postives = 256/479 (53.44%), Query Frame = 1
Query: 883 ANRASKRRPSATLAIVLMTQLQFLATLSLVDSTVTEDSWLADFVIGLRWINLWWPAKI------------------GEDIGSEEC-------VFDAGASEIGALVFVGNLVLVVGILLGVLVLHIVIVSGVEALWLTKKRARENLEAARLRATPAGELRARYKGGKVLRRTTPALDGPSPFVSQGSQGSPGFPLVDECKDDSNDEEEGKEQGLVPMRHKSRLNPVAACREQSTSVWVHFPHVELVILFFAFEGAVASFASAMRHSECPEIFYTA--------LTAMALYPLLMFVMVFRTLWVRIFPDVLLIFKPYDNDRSAPNNRGGFLSRFKSSWTEDYSLFSWADKGQWETVQTENRQLSREGDRFRIGFEPVFVDYTKRGTCFVMISLVEWASIALVGVLIDNSVVQLLAFCGIHVVMFVILVCLKPFANSIINNIGAGVMAIDAVCMGLLAVAATVWEGTSRVGHISTAVIALQ 2220
A +++ R PS+T+A+VL +Q+QFLATLS VD T E S L+ LRW+NLW P++ GED SEE + S++G+ +F+GNL L G + + +HI++ S VEA WL K+RAR + A G+L G T A+ P Q P D ND +E R S + V+ CRE S S W+H+PH+ELV LFFAFEGAV S SA+R + +FY A L+ +A +L F++ VR+ D L++F D + + S+ + +D SLF+WADKG W TVQT + R+ D FRIGFEP++ D+T+ G+ F + +L+EWA++A + VL+DNS VQ FC +H + F++LV KPFANS++N +GA VM DAVCMG+LA++A + T+ I V+ Q
Sbjct: 92 ATQSTFRNPSSTMALVLTSQIQFLATLSFVDDTGVEGSALSGLTKNLRWVNLW-PSQSFSEGVASWVLCNEPEPTSGEDDDSEEDGDSTQRGISWTVISDVGSFLFMGNLALFAGFFVIIFSVHILLASAVEAYWLAKQRARNEIPRAL-----GGDLST--SGSSTAWSGTRAIQSPQLMEHQA------LPSWDSTG--RNDSTNVQEAARTNTRAGSSIGQVSECRELSQSAWLHYPHLELVFLFFAFEGAVTSQVSALRSTSSSTVFYAAVATLTGCNLSRIATMSILGFILFDVRGRVRVRSDALIVFTSNKTDEGS-TGKSTLYSKMVTGLKKDSSLFAWADKGHWNTVQTADEDARRDADWFRIGFEPLYADFTQAGSWFTVYTLIEWATLACIAVLVDNSAVQCGLFCALHSMTFILLVVCKPFANSVLNTMGAIVMLTDAVCMGMLALSAGTFRMTAAADRIDIVVMVAQ 553
BLAST of mRNA_P-littoralis_Contig869.2.4 vs. uniprot
Match: A0A6H5KV63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV63_9PHAE) HSP 1 Score: 251 bits (641), Expect = 7.700e-71 Identity = 155/367 (42.23%), Postives = 205/367 (55.86%), Query Frame = 1
Query: 1279 LRARYKGGKVLRRTTPALDGP--SPFVSQGS----QGSPGFPLVDECKDDSN----DEEEGKEQGLVPMRHKSRLNPVAACREQSTSVWVHFPHVELVILFFAFEGAVASFASAMRHSECPEIFYTALTAMALYPLLMFVMVFRTLWVRIFPDVLLIFKPYDNDRSAPNNRGGFLSRFKSSWTEDYSLFSWADKGQWETVQTENRQLSREGDRFRIGFEPVFVDYTKRGTCFVMISLVE------------------WASIALVGVLIDNSVVQLLAFCGIHVVMFVILVCLKPFAN--------------------SIINNIGAGVMAIDAVCMGLLAVAATVWEGTSRVGHISTAVIALQLFTLC 2235
L A G + R+ PALD P S GS G D+ D++ DEE G G + R +SRL+ VA CRE S W+HFPHVELV LFFA+EGAVAS SA+R + C + A A+ YP+LMFV V RT +VR+ P+ ++ FLS+ ++ W ED+SLF+WA+KG WET +T+N + REG FRIGFEP+FVD+TK G FV +LVE WA++ +G LID SV+QL FC +H + F++LV +PFAN S+IN +GAG++ IDAVCM LLAV+A+ WEGT G + +AV+ LQLF C
Sbjct: 88 LNAAATGSQRRRKKRPALDPPNRSRKARDGSWVAGDGEKKATRSDDILSDTDCSDYDEEGGGGLGTL-TRAESRLSSVAECREHSQFAWLHFPHVELVFLFFAYEGAVASQVSALREAGCLPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTPIV----------------FLSKVRAGWEEDHSLFAWANKGTWETAETDNEGIRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEGCLGLGHAVSFLLIYFAQWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANRLERKTQRVRFLDRLYFRAHSVINAMGAGLVGIDAVCMALLAVSASRWEGTVAAGKVDSAVMLLQLFARC 437 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig869.2.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig869.2.4 >prot_P-littoralis_Contig869.2.4 ID=prot_P-littoralis_Contig869.2.4|Name=mRNA_P-littoralis_Contig869.2.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=749bp PTPSTPAPSTPAPGTPAPSTPAPSTPAPSMPAPSTPAPSTPAPNTPAPSTback to top mRNA from alignment at P-littoralis_Contig869:218..4692- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig869.2.4 ID=mRNA_P-littoralis_Contig869.2.4|Name=mRNA_P-littoralis_Contig869.2.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=4475bp|location=Sequence derived from alignment at P-littoralis_Contig869:218..4692- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig869:218..4692- >mRNA_P-littoralis_Contig869.2.4 ID=mRNA_P-littoralis_Contig869.2.4|Name=mRNA_P-littoralis_Contig869.2.4|organism=Pylaiella littoralis U1_48|type=CDS|length=2247bp|location=Sequence derived from alignment at P-littoralis_Contig869:218..4692- (Pylaiella littoralis U1_48)back to top |