mRNA_P-littoralis_Contig867.17.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig867.17.1
Unique NamemRNA_P-littoralis_Contig867.17.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig867.17.1 vs. uniprot
Match: A0A6H5L0G5_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0G5_9PHAE)

HSP 1 Score: 573 bits (1477), Expect = 2.250e-202
Identity = 266/384 (69.27%), Postives = 315/384 (82.03%), Query Frame = 2
Query:   56 MERLQRAKIRHQRYARCMQIFLVASLAELSGEEEAFLLMATMGLHQHMLYDQLVAPTTLDGVYPHIEFFQEIGGLDFWELVRFEKPHFLELLHELNLPDAMEIHRGGFGISTIRMDLALAVTLWRLACPTTLIRDRLFWGLSEAYIYEIFNLTIEAIHERWGHLVSQLQHEAILPKIDMFCQAIQHRGAPLDRCWGFIDGTVRTIARPWRMQRLWYNGWKRKHALKYQAVDSADGIIRMLWGPVLGRRHDVAMLGESSISQYLQQWFNDAAGTPYCIYGDPAYQISPWLMTPFSGALTPAQQAFNTVMSACRITVEWGFGRVVALWSYVDYAKKQQVAHSACGLAKQYQVAGILTNCSTCFYGNSTSKFFNVTPPTLRQYLQGE 1207
            M RL R +IR++RY  CM + L+A L  L+GEE+ FL+MAT GL +   Y++L+APT L+GV P   FF  IGGLDF EL RFEKPHF ELLHEL LP+ +EIHRGGFG+S + +DLALAVT+WRLACPTTLIRDRLFWG++E  I +IFNLTIEAI +RWGHLV+QLQH+AIL KIDMFCQ I  +GAPL RCWGFIDGT+  I+RP R Q+LWYNGWKRKHALKYQA+D+ DGIIRMLWGP+LGRRHDVAM+GES + Q LQQWFNDAAGTPY ++GDPAY +SPWL+ P+ G L   +QAFNT MS+ R++VEWGFG++VALW YVDYAKKQQVA SACGL KQY VAGILTNC + FY N+TS +F V PP+LR YL GE
Sbjct:    1 MARLARGRIRYERYDECMLVLLLAVLCALAGEEDMFLVMATFGLAKLEAYEELIAPTILEGVCPMYNFFDAIGGLDFKELFRFEKPHFRELLHELQLPEEIEIHRGGFGVSRVPIDLALAVTIWRLACPTTLIRDRLFWGIAEQMICDIFNLTIEAIFDRWGHLVNQLQHDAILSKIDMFCQEIYEKGAPLRRCWGFIDGTICAISRPKRHQKLWYNGWKRKHALKYQAIDTPDGIIRMLWGPILGRRHDVAMVGESGLLQDLQQWFNDAAGTPYYVFGDPAYSLSPWLLAPYKGVLNAFEQAFNTAMSSVRVSVEWGFGKIVALWPYVDYAKKQQVALSACGLGKQYAVAGILTNCHSSFYRNNTSFYFGVKPPSLRSYLNGE 384          
BLAST of mRNA_P-littoralis_Contig867.17.1 vs. uniprot
Match: D7G529_ECTSI (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G529_ECTSI)

HSP 1 Score: 572 bits (1474), Expect = 2.880e-202
Identity = 263/362 (72.65%), Postives = 298/362 (82.32%), Query Frame = 2
Query:  122 VASLAELSGEEEAFLLMATMGLHQHMLYDQLVAPTTLDGVYPHIEFFQEIGGLDFWELVRFEKPHFLELLHELNLPDAMEIHRGGFGISTIRMDLALAVTLWRLACPTTLIRDRLFWGLSEAYIYEIFNLTIEAIHERWGHLVSQLQHEAILPKIDMFCQAIQHRGAPLDRCWGFIDGTVRTIARPWRMQRLWYNGWKRKHALKYQAVDSADGIIRMLWGPVLGRRHDVAMLGESSISQYLQQWFNDAAGTPYCIYGDPAYQISPWLMTPFSGALTPAQQAFNTVMSACRITVEWGFGRVVALWSYVDYAKKQQVAHSACGLAKQYQVAGILTNCSTCFYGNSTSKFFNVTPPTLRQYLQGE 1207
            +A +  + GEE+ FL+M    L +  LYDQLVAPTTL GV PH +FF+ IGG DF EL RFEKPHFL LL  L LP+  E+HRGG+G+S +   LAL VTLWRLACPTTL+RDRLFWGL+E  I EIFN TIE I++RWGHLV QLQHEAILPKIDM C+AIQ  G+PLDRCWGFIDGTVR IARPWRMQRLWYNGWKRKHALKYQAVD+ DGI+R LWGP+LGRRHDVA+LGES++ Q +QQWFND AGTPY IYGDP YQISPWLM PF G LTP  QAFNT MSACR+TVEWG  +++ALW YVDYAKKQQVA S+CGL KQY VAGILTNC +CFYGNSTSK+F V PP+L +YL GE
Sbjct:    1 MAVMLAMMGEEDLFLVMGAYALQEMALYDQLVAPTTLPGVCPHFDFFEVIGGFDFKELFRFEKPHFLRLLDALELPEYFELHRGGYGVSKVPARLALGVTLWRLACPTTLLRDRLFWGLAEPLICEIFNATIECIYDRWGHLVDQLQHEAILPKIDMICEAIQDMGSPLDRCWGFIDGTVRAIARPWRMQRLWYNGWKRKHALKYQAVDTPDGILRQLWGPMLGRRHDVALLGESALLQSMQQWFNDDAGTPYYIYGDPTYQISPWLMAPFKGVLTPEMQAFNTDMSACRVTVEWGLDKILALWPYVDYAKKQQVALSSCGLGKQYSVAGILTNCHSCFYGNSTSKYFGVGPPSLGRYLSGE 362          
BLAST of mRNA_P-littoralis_Contig867.17.1 vs. uniprot
Match: A0A6H5JXV8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV8_9PHAE)

HSP 1 Score: 564 bits (1454), Expect = 7.080e-199
Identity = 266/384 (69.27%), Postives = 306/384 (79.69%), Query Frame = 2
Query:   56 MERLQRAKIRHQRYARCMQIFLVASLAELSGEEEAFLLMATMGLHQHMLYDQLVAPTTLDGVYPHIEFFQEIGGLDFWELVRFEKPHFLELLHELNLPDAMEIHRGGFGISTIRMDLALAVTLWRLACPTTLIRDRLFWGLSEAYIYEIFNLTIEAIHERWGHLVSQLQHEAILPKIDMFCQAIQHRGAPLDRCWGFIDGTVRTIARPWRMQRLWYNGWKRKHALKYQAVDSADGIIRMLWGPVLGRRHDVAMLGESSISQYLQQWFNDAAGTPYCIYGDPAYQISPWLMTPFSGALTPAQQAFNTVMSACRITVEWGFGRVVALWSYVDYAKKQQVAHSACGLAKQYQVAGILTNCSTCFYGNSTSKFFNVTPPTLRQYLQGE 1207
            M RL R KIR++RY   +Q+   A L  + GEEE FL++A + + +   Y+QLV PTT  G+YP   F + IGG DF EL RFEKP F+ LL    LP  +EIHRGGFG S + M++AL +TLWRLACPTTL+RDRLFWG+ EA I EIFNLTI AI+ERWGHLV QLQHEAILPKID+FC AI+ RGAPLDRCW FIDGT+R I+RP  MQRLWYNGWKRKHALKYQAVD+ DGIIR LWGP+LGRRHDVA++GES + QYL+QWFNDAAGTPY IYGDPAYQ+SPWL TPF G LT  QQ FN+ MSACR+TVEWGFG+++ALW YVDYAKKQ VA SA GL KQY VAG+LTNC +C YGNSTSKFF V PPTLR YL GE
Sbjct:    1 MARLARGKIRYERYEEFLQMMTAALLCAVVGEEEVFLVLAVVAMQRLRAYEQLVEPTTHAGMYPTHNFMEVIGGFDFRELFRFEKPDFILLLEVQELPAELEIHRGGFGTSRVPMEIALGLTLWRLACPTTLLRDRLFWGIGEAMICEIFNLTITAIYERWGHLVGQLQHEAILPKIDIFCAAIEGRGAPLDRCWAFIDGTIRAISRPRVMQRLWYNGWKRKHALKYQAVDTPDGIIRQLWGPMLGRRHDVALVGESGLLQYLEQWFNDAAGTPYYIYGDPAYQLSPWLQTPFKGVLTQDQQNFNSDMSACRVTVEWGFGKIMALWPYVDYAKKQHVALSAYGLGKQYSVAGLLTNCHSCLYGNSTSKFFGVRPPTLRSYLAGE 384          
BLAST of mRNA_P-littoralis_Contig867.17.1 vs. uniprot
Match: D7G6Q2_ECTSI (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Q2_ECTSI)

HSP 1 Score: 560 bits (1444), Expect = 2.810e-197
Identity = 262/381 (68.77%), Postives = 307/381 (80.58%), Query Frame = 2
Query:   56 MERLQRAKIRHQRYARCMQIFLVASLAELSGEEEAFLLMATMGLHQHMLYDQLVAPTTLDGVYPHIEFFQEIGGLDFWELVRFEKPHFLELLHELNLPDAMEIHRGGFGISTIRMDLALAVTLWRLACPTTLIRDRLFWGLSEAYIYEIFNLTIEAIHERWGHLVSQLQHEAILPKIDMFCQAIQHRGAPLDRCWGFIDGTVRTIARPWRMQRLWYNGWKRKHALKYQAVDSADGIIRMLWGPVLGRRHDVAMLGESSISQYLQQWFNDAAGTPYCIYGDPAYQISPWLMTPFSGALTPAQQAFNTVMSACRITVEWGFGRVVALWSYVDYAKKQQVAHSACGLAKQYQVAGILTNCSTCFYGNSTSKFFNVTPPTLRQYL 1198
            M RL RA+I H+RY  C+ +  +A L    G ++ F++M+++GL +   Y +LVA TTL GV     F   IGG DFWEL RFEK HF  L+  L LP+ +EI+RGGFG++ I + LAL VTLWRL+CPTTLIRDRLFWGLSE+ + EIFN+TIEAIHERWG+LV +LQH+AILPKID+FCQAI  RGA LDRCWGFIDGT+R IARPWRMQRLWYNGWKRKHALKYQAVD+ DG+IR LWGP+LGRRHDVAMLGES + Q LQQWFNDA G PY IYG+PAYQ+SPWLM P+ G LT AQ+ FNT MS+CR+TVEWGFG++VALW YVDYAKKQQV  SACGL KQY VAG+LTNC +CFYGNSTSK+F V  PTLR YL
Sbjct:    1 MARLARARISHERYNECLSVIALAVLCLCLGHDDLFVVMSSVGLLRLEEYHELVAATTLPGVASMPNFMDVIGGFDFWELTRFEKRHFRLLVELLELPEMIEIYRGGFGVTRIPIQLALVVTLWRLSCPTTLIRDRLFWGLSESKVCEIFNITIEAIHERWGYLVEELQHQAILPKIDVFCQAIWDRGAALDRCWGFIDGTIRAIARPWRMQRLWYNGWKRKHALKYQAVDTPDGMIRQLWGPMLGRRHDVAMLGESGLVQTLQQWFNDANGLPYYIYGNPAYQLSPWLMAPYKGVLTEAQEMFNTSMSSCRVTVEWGFGKIVALWPYVDYAKKQQVGLSACGLGKQYAVAGLLTNCHSCFYGNSTSKYFGVPTPTLRAYL 381          
BLAST of mRNA_P-littoralis_Contig867.17.1 vs. uniprot
Match: A0A6H5KR86_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR86_9PHAE)

HSP 1 Score: 507 bits (1306), Expect = 1.110e-176
Identity = 241/384 (62.76%), Postives = 292/384 (76.04%), Query Frame = 2
Query:   56 MERLQRAKIRHQRYARCMQIFLVASLAELSGEEEAFLLMATMGLHQHMLYDQLVAPTTLDGVYPHIEFFQEIGGLDFWELVRFEKPHFLELLHELNLPDAMEIHRGGFGISTIRMDLALAVTLWRLACPTTLIRDRLFWGLSEAYIYEIFNLTIEAIHERWGHLVSQLQHEAILPKIDMFCQAIQHRGAPLDRCWGFIDGTVRTIARPWRMQRLWYNGWKRKHALKYQAVDSADGIIRMLWGPVLGRRHDVAMLGESSISQYLQQWFNDAAGTPYCIYGDPAYQISPWLMTPFSGALTPAQQAFNTVMSACRITVEWGFGRVVALWSYVDYAKKQQVAHSACGLAKQYQVAGILTNCSTCFYGNSTSKFFNVTPPTLRQYLQGE 1207
            M RL RAK+R +RY  C+   LVA L  L+GEE+ FL+++ +GL Q   Y++L+ PT L+GVYP    F  IGG+DF EL RFEKPHF +LL+EL LP  +EI+RGG+G++ +  D+ALAVT+WRLACPTTLIRDRLFWG++E  I EIFNLTIEAI++RWGHLV +LQHEAILPKID+FCQAI  +G  L RCWGFID TVR IA+P R QRLWYNGWKRKHALKYQ  D  DGIIR LWG +LGRRHD+AM+G+SS+ Q+L+QWFNDAAGTPY +YGDPA+ + PWL+ P+ G LTP QQAFNT MSA R+TVEWGFG            K+++       L KQY VAGILTNC +CFYGNST K+F V PP+L  YL  E
Sbjct:    1 MARLARAKLRSERYDECITGMLVAVLCALAGEEDLFLVLSLLGLVQLEAYEELITPTILEGVYPTYNLFYAIGGMDFKELFRFEKPHFRQLLYELELPKCIEIYRGGYGVTRVPADIALAVTIWRLACPTTLIRDRLFWGIAEQMICEIFNLTIEAIYDRWGHLVDELQHEAILPKIDIFCQAIHAKGGLLTRCWGFIDRTVRAIAKPRRNQRLWYNGWKRKHALKYQGADIPDGIIRQLWGSMLGRRHDIAMMGQSSLLQHLEQWFNDAAGTPYYLYGDPAHPVPPWLLAPYKGVLTPLQQAFNTNMSAVRVTVEWGFG------------KRRR-------LGKQYAVAGILTNCHSCFYGNSTFKYFGVKPPSLTSYLNSE 365          
BLAST of mRNA_P-littoralis_Contig867.17.1 vs. uniprot
Match: A0A6H5L856_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L856_9PHAE)

HSP 1 Score: 504 bits (1298), Expect = 3.360e-175
Identity = 239/384 (62.24%), Postives = 285/384 (74.22%), Query Frame = 2
Query:   56 MERLQRAKIRHQRYARCMQIFLVASLAELSGEEEAFLLMATMGLHQHMLYDQLVAPTTLDGVYPHIEFFQEIGGLDFWELVRFEKPHFLELLHELNLPDAMEIHRGGFGISTIRMDLALAVTLWRLACPTTLIRDRLFWGLSEAYIYEIFNLTIEAIHERWGHLVSQLQHEAILPKIDMFCQAIQHRGAPLDRCWGFIDGTVRTIARPWRMQRLWYNGWKRKHALKYQAVDSADGIIRMLWGPVLGRRHDVAMLGESSISQYLQQWFNDAAGTPYCIYGDPAYQISPWLMTPFSGALTPAQQAFNTVMSACRITVEWGFGRVVALWSYVDYAKKQQVAHSACGLAKQYQVAGILTNCSTCFYGNSTSKFFNVTPPTLRQYLQGE 1207
            M RL RAK+ H R+A C++I ++     + GEE+  L++  + L +   Y++LV PT LDGV    +FF+ +GG DF EL RFEKPHFL LL  L LP  +EI RGG+    I   L LAVTLWRLA PTTL+RDRLFWG+ E  + E+FN+T+EAI+ERWGHLV +LQ +AILPKID FC+AIQ  GAPLDRCW FIDGT+R I RP R QRL+YNGWKR HALKYQAVD+ DGIIR LWGP+LGRRHDV +LG+S +   +   FNDA G PY IYGDPAY +SPWL  PF G LTP Q  FN  MS  R+TVEWGFGR+VALW YVDY KKQQV  SACGL KQY VAGILTNC  CFY NST+++F++ PPTL +YL GE
Sbjct:    1 MARLHRAKLGHARHAECVRILMLCLACSVLGEEDMCLVLGALWLLKWRAYEELVRPTVLDGV--RYDFFEVLGGFDFKELFRFEKPHFLLLLAALELPAELEIWRGGYSCQRIPARLGLAVTLWRLAAPTTLLRDRLFWGMGETLVCEVFNVTVEAIYERWGHLVDELQVDAILPKIDSFCEAIQECGAPLDRCWAFIDGTIRKICRPRRWQRLYYNGWKRLHALKYQAVDTPDGIIRQLWGPMLGRRHDVTLLGQSGLLAVMMDSFNDAEGEPYYIYGDPAYHVSPWLQAPFKGVLTPDQAEFNAAMSRVRVTVEWGFGRIVALWPYVDYHKKQQVGLSACGLGKQYAVAGILTNCHNCFYPNSTAQYFDLQPPTLDEYLHGE 382          
BLAST of mRNA_P-littoralis_Contig867.17.1 vs. uniprot
Match: A0A6H5KAA1_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAA1_9PHAE)

HSP 1 Score: 496 bits (1277), Expect = 5.380e-172
Identity = 240/385 (62.34%), Postives = 288/385 (74.81%), Query Frame = 2
Query:   56 MERLQRAKIRHQRYARCMQIFLVASLAELSGEEEAFLLMATMGLHQHMLYDQLVAPTTLDGVYPHIEFFQEIGGLDFWELVRFEKPHFLELLHELNLPDAMEIHRGGFGISTIRMDLALAVTLWRLACPTTLIRDRLFWGLSEAYIYEIFNLTIEAIHERWGHLVSQLQHEAILPKIDMFCQAIQHRGAPLDRCWGFIDGTVRTIARPWRMQRLWYNGWKRKHALKYQAVDSADGIIRMLWGPVLGRRHDVAMLGESSISQYLQQWFNDAAGTPYCIYGDPAYQISPWLMTPF-SGALTPAQQAFNTVMSACRITVEWGFGRVVALWSYVDYAKKQQVAHSACGLAKQYQVAGILTNCSTCFYGNSTSKFFNVTPPTLRQYLQGE 1207
            M RL RAK+  +R  +CM I L+A +    GE++ FL++    + +   Y +LVAPT L GV    +F + +GG DF E+ RFEK HF +LL  L LP  +EI RGGFG   I   LALAVTLWR A PTTL+RDRLFWG+ E  + E+FN+T+EAIHERWGHLV +LQ EAIL KID FC+AI +RGAPL RCWGF+DGT+R I RP R QRL+YNGWKR HALKYQAVDS DGIIR LWGP+LGRRHDVA+LG+S++   LQQ FNDA G PY +YGDPAYQ SPWL+ P+  G LTPA++ FN  MS  R+TVEWGFGR+VA W YVDY KKQQV  SACGL KQ+ VAGILTNC  CFY NST++ F+V PP+L +YLQGE
Sbjct:    1 MTRLHRAKLGRERLGQCMHILLLAVVCAALGEDDLFLVLGAYWMLKWRAYLELVAPTQLGGV--RYDFMEVLGGFDFKEVFRFEKSHFRQLLAALELPPELEIRRGGFGTQRIPASLALAVTLWRFAAPTTLLRDRLFWGMGETLVCEVFNVTVEAIHERWGHLVEELQVEAILSKIDGFCEAISNRGAPLPRCWGFLDGTLRKICRPGRWQRLYYNGWKRFHALKYQAVDSPDGIIRQLWGPMLGRRHDVALLGQSNLLGVLQQSFNDAQGEPYYLYGDPAYQNSPWLIAPYRGGVLTPAERGFNAAMSGVRVTVEWGFGRIVAQWPYVDYHKKQQVGLSACGLGKQHAVAGILTNCHCCFYPNSTAQDFDVQPPSLEEYLQGE 383          
BLAST of mRNA_P-littoralis_Contig867.17.1 vs. uniprot
Match: A0A6H5JZ31_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ31_9PHAE)

HSP 1 Score: 495 bits (1275), Expect = 1.040e-171
Identity = 236/384 (61.46%), Postives = 289/384 (75.26%), Query Frame = 2
Query:   56 MERLQRAKIRHQRYARCMQIFLVASLAELSGEEEAFLLMATMGLHQHMLYDQLVAPTTLDGVYPHIEFFQEIGGLDFWELVRFEKPHFLELLHELNLPDAMEIHRGGFGISTIRMDLALAVTLWRLACPTTLIRDRLFWGLSEAYIYEIFNLTIEAIHERWGHLVSQLQHEAILPKIDMFCQAIQHRGAPLDRCWGFIDGTVRTIARPWRMQRLWYNGWKRKHALKYQAVDSADGIIRMLWGPVLGRRHDVAMLGESSISQYLQQWFNDAAGTPYCIYGDPAYQISPWLMTPFSGALTPAQQAFNTVMSACRITVEWGFGRVVALWSYVDYAKKQQVAHSACGLAKQYQVAGILTNCSTCFYGNSTSKFFNVTPPTLRQYLQGE 1207
            M RL R ++  +RYA  +Q+  +A+L  L G E+ F+++ T  L +  +Y QLVA TT++G+    ++F+ IGG DF EL+RFEKPHFL+LL  L LP+  E+ R G+G+  +   LA AVTLWRLA P TLIRDR+FWG+SE  I EIFNLTIE I ERWGHLV+ LQ +AILP+ID FC+AI  RG+PL RCWGF+DGT+R IA PW+ QR++ NGWKR H LKYQAVDS DGI R LWGPVLGRRHDV +LG S + + L Q FNDAAG PY IYGDPAYQ+SPWLM PF G L+ A+ AF   MS  R+ VEWGFGRVVALW YVDY KK+QVA SACGL +QY VAGILTNC  CF  NST+K F++TPP+L++YL GE
Sbjct:    1 MARLARGRLAAERYAESIQVTTIAALCALVGGEDLFIVLGTYSLLRWQMYKQLVAATTIEGI--RFDYFERIGGFDFKELLRFEKPHFLDLLGALQLPNTFEVSRWGYGVQRVPARLAFAVTLWRLAAPRTLIRDRIFWGMSETLICEIFNLTIEVIFERWGHLVNDLQVDAILPRIDSFCEAIAGRGSPLTRCWGFLDGTIRKIAPPWQNQRIYDNGWKRVHLLKYQAVDSPDGITRQLWGPVLGRRHDVTLLGLSGLLETLMQSFNDAAGVPYYIYGDPAYQVSPWLMAPFKGLLSVAKVAFIRAMSRVRVAVEWGFGRVVALWPYVDYVKKRQVALSACGLGRQYAVAGILTNCPCCFNLNSTAKLFDLTPPSLQEYLSGE 382          
BLAST of mRNA_P-littoralis_Contig867.17.1 vs. uniprot
Match: A0A6H5KDJ8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ8_9PHAE)

HSP 1 Score: 453 bits (1165), Expect = 5.970e-156
Identity = 209/318 (65.72%), Postives = 245/318 (77.04%), Query Frame = 2
Query:  254 EFFQEIGGLDFWELVRFEKPHFLELLHELNLPDAMEIHRGGFGISTIRMDLALAVTLWRLACPTTLIRDRLFWGLSEAYIYEIFNLTIEAIHERWGHLVSQLQHEAILPKIDMFCQAIQHRGAPLDRCWGFIDGTVRTIARPWRMQRLWYNGWKRKHALKYQAVDSADGIIRMLWGPVLGRRHDVAMLGESSISQYLQQWFNDAAGTPYCIYGDPAYQISPWLMTPFSGALTPAQQAFNTVMSACRITVEWGFGRVVALWSYVDYAKKQQVAHSACGLAKQYQVAGILTNCSTCFYGNSTSKFFNVTPPTLRQYLQGE 1207
            +F + +GG DF EL+RFEKPHF  LL  L LP    I RGG G+  I   L LAVTLWR + PTTL+RDRLFWG+ E  + E+FN+TIEAI++RWGHLV  LQ +AILPKI  FC+AI  RG+PL RCWGF+DGT+R I RP R QR++YNGWKR HALKYQAVDS DGIIR LWGP LGRRHDVA+LGES +   L Q FNDA G PY +YGDPAYQ SPWLM+P+ G LTP +  FN+ MS+ R+TVEWGFGRVVA W YVDY  KQQV  SACGL KQY VAGILTNC  CFY NST+++F++ PP+L +YLQGE
Sbjct:    4 DFMEVLGGFDFKELLRFEKPHFRRLLAALELPPEFVISRGGRGVLRIPARLCLAVTLWRFSAPTTLLRDRLFWGMGETLVCEVFNVTIEAIYDRWGHLVRDLQVDAILPKIGDFCEAISSRGSPLPRCWGFLDGTIRKICRPGRWQRMYYNGWKRPHALKYQAVDSPDGIIRQLWGPALGRRHDVALLGESDLLAVLMQSFNDAQGEPYYLYGDPAYQNSPWLMSPYRGLLTPEEAGFNSAMSSVRVTVEWGFGRVVAQWPYVDYHNKQQVGLSACGLGKQYSVAGILTNCHCCFYPNSTAQYFDLQPPSLEEYLQGE 321          
BLAST of mRNA_P-littoralis_Contig867.17.1 vs. uniprot
Match: A0A6H5K122_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K122_9PHAE)

HSP 1 Score: 446 bits (1147), Expect = 2.580e-152
Identity = 217/384 (56.51%), Postives = 267/384 (69.53%), Query Frame = 2
Query:   56 MERLQRAKIRHQRYARCMQIFLVASLAELSGEEEAFLLMATMGLHQHMLYDQLVAPTTLDGVYPHIEFFQEIGGLDFWELVRFEKPHFLELLHELNLPDAMEIHRGGFGISTIRMDLALAVTLWRLACPTTLIRDRLFWGLSEAYIYEIFNLTIEAIHERWGHLVSQLQHEAILPKIDMFCQAIQHRGAPLDRCWGFIDGTVRTIARPWRMQRLWYNGWKRKHALKYQAVDSADGIIRMLWGPVLGRRHDVAMLGESSISQYLQQWFNDAAGTPYCIYGDPAYQISPWLMTPFSGALTPAQQAFNTVMSACRITVEWGFGRVVALWSYVDYAKKQQVAHSACGLAKQYQVAGILTNCSTCFYGNSTSKFFNVTPPTLRQYLQGE 1207
            M RL RA++ H+RYA CM+I L+A++    GEE+  L++    + +   + +LVAPT LDG+    +F + + G DF EL+RFEKPHF  LL  L LP    I R     +                      RDRLFWG+ E  + E+FN+TIEA+++RWGHLV  LQ +AILPKI  FC+AI  RG+PL RCWGF+DGT+R I RP R QR++YNGWKR HALKYQAVDS DGIIR LWGP LGRRHDVA+LGES +   L Q FNDA G PY +YGDPAYQ SPWLM+P+ G LTP +  FN+ MS+ R+ VEWGFGRVVA W YVDY KKQQV  SACGL KQY VAGILTNC  CFY NST+++F++ PP+L +YLQGE
Sbjct:    1 MARLHRARMGHERYAECMRILLLAAVCGALGEEDLLLVLGAYWVVKWRAFQELVAPTQLDGM--RYDFMEVLDGFDFKELLRFEKPHFRRLLTALELPPEFVISR--CPPTXXXXXXXXXXXXXXXXXXXXXXRDRLFWGMGETLVCEVFNVTIEAVYDRWGHLVRDLQVDAILPKIGDFCEAISSRGSPLPRCWGFLDGTIRKICRPGRWQRMYYNGWKRPHALKYQAVDSPDGIIRQLWGPALGRRHDVALLGESDLLAVLMQSFNDAQGEPYYLYGDPAYQNSPWLMSPYRGLLTPEEAGFNSAMSSVRVPVEWGFGRVVAQWPYVDYHKKQQVGLSACGLGKQYSVAGILTNCHCCFYPNSTAQYFDLQPPSLEEYLQGE 380          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig867.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0G5_9PHAE2.250e-20269.27DDE Tnp4 domain-containing protein n=3 Tax=Ectocar... [more]
D7G529_ECTSI2.880e-20272.65DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JXV8_9PHAE7.080e-19969.27DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
D7G6Q2_ECTSI2.810e-19768.77DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5KR86_9PHAE1.110e-17662.76DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L856_9PHAE3.360e-17562.24DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KAA1_9PHAE5.380e-17262.34DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JZ31_9PHAE1.040e-17161.46DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KDJ8_9PHAE5.970e-15665.72DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K122_9PHAE2.580e-15256.51DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig867contigP-littoralis_Contig867:87980..90032 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G529
PFAMsDDE_Tnp_4
Model size1337
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.98e-203
EggNOG OGs2AWDH@1|root,2RZYI@2759|Eukaryota
DescriptionDDE superfamily endonuclease
Cds size1158
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791740.7656326-UTR-P-littoralis_Contig867:87979..881031680791740.7656326-UTR-P-littoralis_Contig867:87979..88103Pylaiella littoralis U1_48UTRP-littoralis_Contig867 87980..88103 -
1680791740.8024514-UTR-P-littoralis_Contig867:89977..900321680791740.8024514-UTR-P-littoralis_Contig867:89977..90032Pylaiella littoralis U1_48UTRP-littoralis_Contig867 89978..90032 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791740.7786937-CDS-P-littoralis_Contig867:88103..889471680791740.7786937-CDS-P-littoralis_Contig867:88103..88947Pylaiella littoralis U1_48CDSP-littoralis_Contig867 88104..88947 -
1680791740.7916012-CDS-P-littoralis_Contig867:89663..899771680791740.7916012-CDS-P-littoralis_Contig867:89663..89977Pylaiella littoralis U1_48CDSP-littoralis_Contig867 89664..89977 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig867.17.1prot_P-littoralis_Contig867.17.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig867 88104..89977 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig867.17.1

>prot_P-littoralis_Contig867.17.1 ID=prot_P-littoralis_Contig867.17.1|Name=mRNA_P-littoralis_Contig867.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=386bp
MERLQRAKIRHQRYARCMQIFLVASLAELSGEEEAFLLMATMGLHQHMLY
DQLVAPTTLDGVYPHIEFFQEIGGLDFWELVRFEKPHFLELLHELNLPDA
MEIHRGGFGISTIRMDLALAVTLWRLACPTTLIRDRLFWGLSEAYIYEIF
NLTIEAIHERWGHLVSQLQHEAILPKIDMFCQAIQHRGAPLDRCWGFIDG
TVRTIARPWRMQRLWYNGWKRKHALKYQAVDSADGIIRMLWGPVLGRRHD
VAMLGESSISQYLQQWFNDAAGTPYCIYGDPAYQISPWLMTPFSGALTPA
QQAFNTVMSACRITVEWGFGRVVALWSYVDYAKKQQVAHSACGLAKQYQV
AGILTNCSTCFYGNSTSKFFNVTPPTLRQYLQGEA*
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mRNA from alignment at P-littoralis_Contig867:87980..90032-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig867.17.1 ID=mRNA_P-littoralis_Contig867.17.1|Name=mRNA_P-littoralis_Contig867.17.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2053bp|location=Sequence derived from alignment at P-littoralis_Contig867:87980..90032- (Pylaiella littoralis U1_48)
CACAACCCACAGCACCACACGCGTTGTTCCGCCCTATACAGCCCAAGCGC GGGCCATGGAGCGCCTTCAACGCGCAAAGATACGCCACCAGCGCTACGCG CGTTGCATGCAGATATTTCTGGTGGCATCGCTCGCCGAGTTGTCCGGCGA GGAGGAAGCGTTCTTGCTCATGGCGACCATGGGCCTGCATCAGCACATGT TGTACGATCAGCTCGTAGCGCCCACGACGCTAGACGGAGTATATCCTCAC ATCGAATTCTTTCAAGAGATTGGGGGGCTTGATTTCTGGGAGCTCGTCCG GTTTGAAAAGCCACACTTCCTGGAGCTTCTTCACGAGCTTAACTTGCCGG ATGCCATGGAAATCCACAGGTAGGTCAGAGAGACACAACTATCTGCTGTA GATCATACTTTTTGCTGCTGTGGTACACTGCTGTAACTGAACACGTACAC CCACAGCAGCAGTGCGGCCCTACGTATGGTGGGTTAGTACACTAAACAGC CGTTGGCGACAGTCCAATGTCGGGTCAACTCTAGCGTAAAGCTCTGCATC TTTACGCACAGGACGCAGCCTTCATGAAACGTAAAGAGAGAAATACACGA CGCTCAGATAGATGCTCATGTAATTCACGAAACGGGCCCGTTCGCTATCC GTTACAGCAGTATAAGTATTACAGGTTTGTTCTGACATTCAAGTAAGTTC GCCCGGTGGATGTGTGATTCACGACGAGTACTGCTGTGATGTCTACATAT GAGGTATACATGAAGTGGCACGTCAGCAGCAAATGCATAAACTGCCATTC GTGGTGTGTGCTTTTTCGTAAAGTCATATGCACGCCGTGTACTGCTGTAT GTAGTCGTTCCGAAGATATTACTCGACGCCGACGGGTCTGGCGGGCGTCT CTCTACGATAACCACCCGTTTGATTTCATTTACGTGCTAAAGCAAGAACT ATAGACACGCCGAAATTTTCTCCCTTTGGGGCAGTGGGAACTGGGTGCAA AGTCATTGTTCATTGTCCACCATCCCTCACTATATTTCTCGTCGTGTGGG TGCCCCTTGCGTCCGACACTGTTTTCTCTGTGCAGAGGGGGCTTCGGAAT CTCAACAATTCGCATGGACTTGGCCCTGGCCGTGACGCTCTGGCGGTTGG CCTGCCCCACTACTTTGATTCGCGACAGGCTCTTTTGGGGTCTATCAGAA GCGTACATCTACGAGATCTTTAATCTCACCATAGAAGCGATTCACGAAAG ATGGGGGCATCTAGTTAGCCAGTTGCAGCACGAAGCTATTCTGCCTAAAA TCGACATGTTCTGTCAGGCCATTCAACATCGCGGTGCGCCCCTAGATCGA TGCTGGGGATTTATCGACGGAACCGTTCGAACGATTGCACGCCCATGGCG CATGCAGAGACTCTGGTACAACGGTTGGAAGCGTAAGCACGCGTTGAAGT ACCAAGCTGTAGACTCCGCGGACGGTATCATACGTATGCTTTGGGGCCCT GTGCTTGGTCGCCGCCACGACGTTGCCATGTTGGGGGAGAGTAGTATTTC GCAGTACTTGCAGCAATGGTTTAACGACGCAGCAGGAACTCCATATTGCA TATACGGGGACCCCGCTTACCAGATTTCGCCTTGGCTGATGACCCCATTC TCGGGGGCCCTCACACCGGCTCAACAGGCCTTCAACACAGTAATGAGCGC TTGCAGGATCACGGTAGAGTGGGGTTTCGGCAGGGTAGTGGCTTTGTGGT CGTACGTCGACTACGCGAAGAAGCAACAAGTCGCCCATAGTGCGTGTGGA CTTGCAAAGCAGTACCAGGTTGCAGGTATCTTGACGAACTGCTCGACCTG CTTTTACGGGAACTCGACATCGAAGTTTTTCAACGTCACGCCTCCTACCC TGCGGCAGTACTTGCAAGGAGAGGCGTGATAAATTTGTTGTTCTTGGGCG GTTGGTCATGCTTGCGTTTGTGTAATTGTTGAGTATTCTGTATGTCTTTC TCGGTCGCGTTGCATTTTTAGCAGCATACAGTATGGTGTGGCGCACATGA CAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig867:87980..90032-

>mRNA_P-littoralis_Contig867.17.1 ID=mRNA_P-littoralis_Contig867.17.1|Name=mRNA_P-littoralis_Contig867.17.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1158bp|location=Sequence derived from alignment at P-littoralis_Contig867:87980..90032- (Pylaiella littoralis U1_48)
ATGGAGCGCCTTCAACGCGCAAAGATACGCCACCAGCGCTACGCGCGTTG
CATGCAGATATTTCTGGTGGCATCGCTCGCCGAGTTGTCCGGCGAGGAGG
AAGCGTTCTTGCTCATGGCGACCATGGGCCTGCATCAGCACATGTTGTAC
GATCAGCTCGTAGCGCCCACGACGCTAGACGGAGTATATCCTCACATCGA
ATTCTTTCAAGAGATTGGGGGGCTTGATTTCTGGGAGCTCGTCCGGTTTG
AAAAGCCACACTTCCTGGAGCTTCTTCACGAGCTTAACTTGCCGGATGCC
ATGGAAATCCACAGAGGGGGCTTCGGAATCTCAACAATTCGCATGGACTT
GGCCCTGGCCGTGACGCTCTGGCGGTTGGCCTGCCCCACTACTTTGATTC
GCGACAGGCTCTTTTGGGGTCTATCAGAAGCGTACATCTACGAGATCTTT
AATCTCACCATAGAAGCGATTCACGAAAGATGGGGGCATCTAGTTAGCCA
GTTGCAGCACGAAGCTATTCTGCCTAAAATCGACATGTTCTGTCAGGCCA
TTCAACATCGCGGTGCGCCCCTAGATCGATGCTGGGGATTTATCGACGGA
ACCGTTCGAACGATTGCACGCCCATGGCGCATGCAGAGACTCTGGTACAA
CGGTTGGAAGCGTAAGCACGCGTTGAAGTACCAAGCTGTAGACTCCGCGG
ACGGTATCATACGTATGCTTTGGGGCCCTGTGCTTGGTCGCCGCCACGAC
GTTGCCATGTTGGGGGAGAGTAGTATTTCGCAGTACTTGCAGCAATGGTT
TAACGACGCAGCAGGAACTCCATATTGCATATACGGGGACCCCGCTTACC
AGATTTCGCCTTGGCTGATGACCCCATTCTCGGGGGCCCTCACACCGGCT
CAACAGGCCTTCAACACAGTAATGAGCGCTTGCAGGATCACGGTAGAGTG
GGGTTTCGGCAGGGTAGTGGCTTTGTGGTCGTACGTCGACTACGCGAAGA
AGCAACAAGTCGCCCATAGTGCGTGTGGACTTGCAAAGCAGTACCAGGTT
GCAGGTATCTTGACGAACTGCTCGACCTGCTTTTACGGGAACTCGACATC
GAAGTTTTTCAACGTCACGCCTCCTACCCTGCGGCAGTACTTGCAAGGAG
AGGCGTGA
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