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Homology
BLAST of mRNA_P-littoralis_Contig866.7.2 vs. uniprot
Match: D7G3M8_ECTSI (Similar to metal response element-binding transcription factor-1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3M8_ECTSI) HSP 1 Score: 511 bits (1316), Expect = 7.570e-171 Identity = 297/458 (64.85%), Postives = 338/458 (73.80%), Query Frame = 0
Query: 211 HECLVCGKTFGKASKLVRHAATHTGEKPFRCDEESXXXXXXXXXXXXXXXXXXARRKAGLSVSVGSAARREAETRQNAALFAEKAAAAGVSLQ-PVAGT--SPADPFLHYTPTTAPLLEASRMERERALGGSGSGTSTGGGWKHSCATCGRNFLDNYHLKRHVKAIHEGPRPYTCDHPVVAASPHITSSSS----SSSSVIPTVPGGRVDGDTETKNTRQGDVGVVQKRKGRAEEEKEAGRSEAGEVGAAETE------------VEQQGRARGVCGAAFAKKWQLREHLYAEHGQTRYNSRQHRCPYLGCGREFDRPSKLAAHEKTHEARFVCEFDGCKAAFVLASGLNLHLKEEHPFRCGVCDMIFDREDKMQIHQGTHGRAGDGDYIRPHHCNVLGCGKSFTEKRNLNAHRRTRHTEGWRKRFRCEASGCTMTYAHRHTLVKHVKREHQRPSSGS 649
+ECL+CGK+F KA KL RHAATHTGEKPF C E XXXXXXXXXXXXXXXXXX RRKAGLS SVG AARREAETRQ AA F +AAAAGVSL+ P AG +P TTAPLLEASR+ERERA+ GSGSG GWK +C CGRNFLDNYHL+RH+KAIHE PRPYTCDHPVV P S++S ++++ PGG + + RQG+ VV + +G A+E K+ R++ G VG E E ++Q R GVCGA+FAKKWQLREHL+AEHGQ+++NSRQHRC + GCGR FDRPSKLAAHEKTH+ARFVC+FDGC AAFVLASGLNLHLKE+HPFRCGVCD +FDREDKMQIHQ TH RAGDGD+IRP+HCNV GCGK+FTEKRNLNAHRRT HTEG RKRFR VKHVKREHQ S GS
Sbjct: 77 YECLICGKSFSKACKLARHAATHTGEKPFVCSEAGXXXXXXXXXXXXXXXXXXXRRKAGLSTSVGDAARREAETRQRAAAFVAEAAAAGVSLEEPGAGGIGAPRRVLPLMKTTTAPLLEASRLERERAVNGSGSGGGGAQGWKFTCGNCGRNFLDNYHLQRHIKAIHEAPRPYTCDHPVVVPPPTAPSAASVADGTAAAFATAFPGG-----SRARCERQGEE-VVAEARGEAKEGKDVSRAK-GSVGGVEAEGGATERGLQQQPQQKQQRVLGVCGASFAKKWQLREHLFAEHGQSKFNSRQHRCSHAGCGRSFDRPSKLAAHEKTHKARFVCQFDGCGAAFVLASGLNLHLKEKHPFRCGVCDKVFDREDKMQIHQATHARAGDGDFIRPYHCNVRGCGKAFTEKRNLNAHRRTAHTEGGRKRFRXXXXXXXXXXXXXXXXVKHVKREHQSSSGGS 527
BLAST of mRNA_P-littoralis_Contig866.7.2 vs. uniprot
Match: A0A3N4IN55_ASCIM (Uncharacterized protein (Fragment) n=1 Tax=Ascobolus immersus RN42 TaxID=1160509 RepID=A0A3N4IN55_ASCIM) HSP 1 Score: 52.4 bits (124), Expect = 2.610e-5 Identity = 18/34 (52.94%), Postives = 25/34 (73.53%), Query Frame = 0
Query: 211 HECLVCGKTFGKASKLVRHAATHTGEKPFRCDEE 244
H C +CGKTF + S L H +HTG+KPF+C++E
Sbjct: 3 HVCRICGKTFARPSSLTTHTYSHTGQKPFKCEQE 36
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR013087 | Zinc finger C2H2-type | SMART | SM00355 | c2h2final6 | coord: 584..609
e-value: 0.0017
score: 27.6
coord: 523..548
e-value: 0.097
score: 21.8
coord: 617..642
e-value: 0.053
score: 22.7
coord: 211..233
e-value: 0.021
score: 24.0
coord: 495..519
e-value: 0.0019
score: 27.4
coord: 466..485
e-value: 93.0
score: 4.7
coord: 550..572
e-value: 0.05
score: 22.7
coord: 351..374
e-value: 0.25
score: 20.4
coord: 239..263
e-value: 0.012
score: 24.8 |
| IPR013087 | Zinc finger C2H2-type | PFAM | PF00096 | zf-C2H2 | coord: 239..263
e-value: 0.012
score: 16.1
coord: 495..519
e-value: 0.0013
score: 19.1
coord: 584..609
e-value: 0.0025
score: 18.2
coord: 211..233
e-value: 0.0041
score: 17.5 |
| IPR013087 | Zinc finger C2H2-type | PROSITE | PS00028 | ZINC_FINGER_C2H2_1 | coord: 497..519 |
| IPR013087 | Zinc finger C2H2-type | PROSITE | PS00028 | ZINC_FINGER_C2H2_1 | coord: 353..374 |
| IPR013087 | Zinc finger C2H2-type | PROSITE | PS00028 | ZINC_FINGER_C2H2_1 | coord: 619..642 |
| IPR013087 | Zinc finger C2H2-type | PROSITE | PS00028 | ZINC_FINGER_C2H2_1 | coord: 586..609 |
| IPR013087 | Zinc finger C2H2-type | PROSITE | PS00028 | ZINC_FINGER_C2H2_1 | coord: 213..233 |
| IPR013087 | Zinc finger C2H2-type | PROSITE | PS00028 | ZINC_FINGER_C2H2_1 | coord: 241..263 |
| IPR013087 | Zinc finger C2H2-type | PROSITE | PS50157 | ZINC_FINGER_C2H2_2 | coord: 211..238
score: 15.375654 |
| IPR013087 | Zinc finger C2H2-type | PROSITE | PS50157 | ZINC_FINGER_C2H2_2 | coord: 617..647
score: 8.64193 |
| IPR013087 | Zinc finger C2H2-type | PROSITE | PS50157 | ZINC_FINGER_C2H2_2 | coord: 584..610
score: 11.509996 |
| IPR013087 | Zinc finger C2H2-type | PROSITE | PS50157 | ZINC_FINGER_C2H2_2 | coord: 550..572
score: 8.64193 |
| IPR013087 | Zinc finger C2H2-type | PROSITE | PS50157 | ZINC_FINGER_C2H2_2 | coord: 239..268
score: 11.967224 |
| IPR013087 | Zinc finger C2H2-type | PROSITE | PS50157 | ZINC_FINGER_C2H2_2 | coord: 351..379
score: 13.94162 |
| IPR013087 | Zinc finger C2H2-type | PROSITE | PS50157 | ZINC_FINGER_C2H2_2 | coord: 495..519
score: 10.595541 |
| None | No IPR available | GENE3D | 3.30.160.60 | Classic Zinc Finger | coord: 235..268
e-value: 2.1E-10
score: 42.2 |
| None | No IPR available | GENE3D | 3.30.160.60 | Classic Zinc Finger | coord: 521..580
e-value: 5.0E-6
score: 28.6 |
| None | No IPR available | GENE3D | 3.30.160.60 | Classic Zinc Finger | coord: 581..657
e-value: 1.3E-8
score: 36.7 |
| None | No IPR available | GENE3D | 3.30.160.60 | Classic Zinc Finger | coord: 210..234
e-value: 5.7E-10
score: 40.8 |
| None | No IPR available | GENE3D | 3.30.160.60 | Classic Zinc Finger | coord: 350..384
e-value: 7.2E-8
score: 33.9 |
| None | No IPR available | GENE3D | 3.30.160.60 | Classic Zinc Finger | coord: 487..520
e-value: 5.4E-8
score: 34.5 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 391..406 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 737..756 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 635..756 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 69..107 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 391..456 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 415..447 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 14..29 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 115..179 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 647..680 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..206 |
| None | No IPR available | PANTHER | PTHR46179 | ZINC FINGER PROTEIN | coord: 353..386
coord: 419..548
coord: 100..385
coord: 467..728 |
| IPR036236 | Zinc finger C2H2 superfamily | SUPERFAMILY | 57667 | beta-beta-alpha zinc fingers | coord: 211..263 |
| IPR036236 | Zinc finger C2H2 superfamily | SUPERFAMILY | 57667 | beta-beta-alpha zinc fingers | coord: 350..384 |
| IPR036236 | Zinc finger C2H2 superfamily | SUPERFAMILY | 57667 | beta-beta-alpha zinc fingers | coord: 546..604 |
| IPR036236 | Zinc finger C2H2 superfamily | SUPERFAMILY | 57667 | beta-beta-alpha zinc fingers | coord: 506..559 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig866.7.2 ID=prot_P-littoralis_Contig866.7.2|Name=mRNA_P-littoralis_Contig866.7.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=757bp
MGSLGIRRRLDQSLNANHAPSQQQQLQRQRVSLKRRRPYQDEQRPVLAPC
SASRQLLAAPRTPQVGESGEEEDGEDEVEEEGEGDPDDDSEYEEEEGSEE
EDSDEDGGGATGVAKHQQPQKQQCRNLAATSAAAAATTTTSPPRPQTKRQ
RQSKGAVDSSSSRGKTPKVSSQSQRQLKTQKREGAMHSQEQGGAGAWGSR
ERSGGPGGGEHECLVCGKTFGKASKLVRHAATHTGEKPFRCDEESCSKAF
ATKDKLKRHALSHARRKAGLSVSVGSAARREAETRQNAALFAEKAAAAGV
SLQPVAGTSPADPFLHYTPTTAPLLEASRMERERALGGSGSGTSTGGGWK
HSCATCGRNFLDNYHLKRHVKAIHEGPRPYTCDHPVVAASPHITSSSSSS
SSVIPTVPGGRVDGDTETKNTRQGDVGVVQKRKGRAEEEKEAGRSEAGEV
GAAETEVEQQGRARGVCGAAFAKKWQLREHLYAEHGQTRYNSRQHRCPYL
GCGREFDRPSKLAAHEKTHEARFVCEFDGCKAAFVLASGLNLHLKEEHPF
RCGVCDMIFDREDKMQIHQGTHGRAGDGDYIRPHHCNVLGCGKSFTEKRN
LNAHRRTRHTEGWRKRFRCEASGCTMTYAHRHTLVKHVKREHQRPSSGST
SKSNLKSANSKVKSAESISSTSSRWQDSSTVAAPAEAGPSAAGTRETEGK
GPADPPAESGVEGPPEQSVARSADQSLEPPVERSNVAAEGRSSSSSVSSG
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Annotated Terms
The following terms have been associated with this polypeptide:
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