mRNA_P-littoralis_Contig863.8.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig863.8.3
Unique NamemRNA_P-littoralis_Contig863.8.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig863.8.3 vs. uniprot
Match: D8LGP8_ECTSI (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGP8_ECTSI)

HSP 1 Score: 664 bits (1712), Expect = 4.590e-228
Identity = 326/379 (86.02%), Postives = 357/379 (94.20%), Query Frame = 2 
Query:  668 ARPSCRVGLRESFSKMRWTASSLESLKSAEERLLASLNLNVFDTDIGNDQHIHTVEGGKGKSEVPVVLCHGYGMGVGGWHLNLGELTASAHVMAKDWLGCGLSSRPRWELEGLEETESFFVDSLESRWRQANEVEKMVLCGHSLGGYLSVCYAEKYPQRIDKLVLASPVGFPEEPEGSREAVESRPFSQRNLIKFVRWGWAKGITPGDVVRTMGPLGYRMMMGYSNRRFQDAEFDKRALGDYLYHNLAATQGSGERALSRLLKPGAWAISPLKHRLPKVDPSVPVHFIFGDRDWMDSTAAQELVDSAEANG-TGQKITISKVQNAGHQLFLDNPRGFNAELLRVCGVEVDPAAANAAYAATQTAVEEMAAAAAIE-AEG 1798
            A+  CRV LRES +KMRWTASSL+SL+SAEERL ++LNLNVFD DIG++QHIHTVEGGKGKSE+PVVLCHGYGMGVGGWHLNLGELTAS HVMAKDWLGCGLSSRPRW+LEG++ETE+FFVDSLE RWRQANEV+KMVLCGHSLGGYLSVCYAEKYPQRIDKLVLASPVGFPEEPEG REA+ESRPF+QRNL+KFV WGWAKGITPGDVVRTMGPLGYRMMMGYSNRRFQ AEFDKRALGDYLYHNLAAT GSGERALSR+LKPGAWA SPLKHRLPK+DPSVPVHF+FGDRDWM+STA QEL++SA A+G +GQ+ITI+ V NAGHQLFLDNPRGFNAELLR+CGV+VDPAAA+AAYAATQ AV +MAAAAA E AEG
Sbjct:   73 AKTPCRVTLRESLAKMRWTASSLDSLRSAEERLFSALNLNVFDADIGSEQHIHTVEGGKGKSEIPVVLCHGYGMGVGGWHLNLGELTASTHVMAKDWLGCGLSSRPRWDLEGVKETEAFFVDSLE-RWRQANEVDKMVLCGHSLGGYLSVCYAEKYPQRIDKLVLASPVGFPEEPEGFREAIESRPFAQRNLMKFVGWGWAKGITPGDVVRTMGPLGYRMMMGYSNRRFQQAEFDKRALGDYLYHNLAATHGSGERALSRVLKPGAWAHSPLKHRLPKLDPSVPVHFMFGDRDWMNSTAPQELLESARADGGSGQEITITTVPNAGHQLFLDNPRGFNAELLRLCGVDVDPAAADAAYAATQDAVAQMAAAAAAEEAEG 450
[Close]
BLAST of mRNA_P-littoralis_Contig863.8.3 vs. uniprot
Match: A0A835ZEV4_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEV4_9STRA)

HSP 1 Score: 346 bits (888), Expect = 1.080e-106
Identity = 167/335 (49.85%), Postives = 230/335 (68.66%), Query Frame = 2 
Query:  719 WTASSLESLKSAEERLLASLNLNVFDTDIGNDQHIHTVEGG-KGKSEVPVVLCHGYGMGVGGWHLNLGELTASAHVMAKDWLGCGLSSRPRWELEGLEETESFFVDSLESRWRQANEVEKMVLCGHSLGGYLSVCYAEKYPQRIDKLVLASPVGFPEEPEGSREAVESRPFSQRNLIKFVRWGWAKGITPGDVVRTMGPLGYRMMMGYSNRRFQDA-EFDKRALGDYLYHNLAATQGSGERALSRLLKPGAWAISPLKHRLPKVDPSVPVHFIFGDRDWMDSTAAQELVDSAEANGTGQKITISKVQNAGHQLFLDNPRGFNAELLRVCGVEVDP 1717
            W  SSL  L+ AE RLL    +  FDT++G+D  +H +EGG +  S+ P+VLCHGYG G   + LN   LTA+ HV AKDW+G G SSRP++  +G++ TE  F+  +E RWR AN+V++M+LCGHSLGGYLSV YAE+YP+R+ KL+L SPVG P  PE     +  +P+ +R L+    + W++G+TPGD+VR +GP+G R+M GY+ RRF+D  E D+ A G+YLYHN AAT GSGERALS LL P AWA SPL  R+PK+  ++P+HF++G+ DWMD   A ++ +   A  T   +T+  +  AGHQ+F+D P  FN  +LR+C V  DP
Sbjct:    6 WVQSSLLHLEEAERRLLLKTGMRAFDTEVGDDLTVHALEGGSRDASKPPLVLCHGYGQGAAAFALNFPHLTANLHVYAKDWMGYGQSSRPKFTPKGVDATEEHFIKYME-RWRDANKVQRMILCGHSLGGYLSVAYAERYPERVAKLILVSPVGVPHRPEEFTNHLAQQPWGRRTLLNSAAFLWSRGVTPGDLVRGLGPIGRRLMDGYAQRRFKDGGELDRTAFGEYLYHNAAATAGSGERALSELLLPYAWAKSPLHDRIPKLSRTIPIHFVYGEVDWMDHRHALKVREQMVATHT---VTVETIAGAGHQVFIDEPSAFNDAILRLCDVH-DP 335
[Close]
BLAST of mRNA_P-littoralis_Contig863.8.3 vs. uniprot
Match: A0A7S4DX92_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DX92_9EUKA)

HSP 1 Score: 234 bits (598), Expect = 5.100e-65
Identity = 141/318 (44.34%), Postives = 188/318 (59.12%), Query Frame = 2 
Query:  782 LNVFDTDIGNDQHIHT--VEGGKGKSEVPVVLCHGYGMGVGGWHLNLGELTAS----------AHVMAKDWLGCGLSSRPRWELEGLEETESFFVDSLESRWRQANEVEKMVLCGHSLGGYLSVCYAEKYPQRIDKLVLASPVGFPEEPEGSREAVESR-PFSQRNLIKFVRWGWAKGITPGDVVRTMGPLGYRMMMGYSNRRFQDAEF-DKRALGDYLYHNLAATQGSGERALSRLLKPGAWAISPLKHRLPKVDPS--VPVHFIFGDRDWMDSTAAQELVDSAEANGTGQKITISKVQNAGHQLFLDNPRGFNAEL 1687
            +++ DT I + + +H+  +      +  P+V+  GY  GVG +  N+  L +            H++  DWLG GLSSRPR+    L ETE+FFV+SLE  WR A +++KMVLCGHSLGGYLS  YAE+YP R++ LVL SP G P EPEG R  + +R P+  R L+  V   W+ G+TPG VVR MGP G   +     RRF + E  D  AL DY Y N+A  +GSGE ALS++L+P AWA SPL  R+  +       + FI+GD DWMD T A  +    +AN +   I +  V  AGHQL L NPRGF+  L
Sbjct:   70 VSLEDTRIASGESLHSAKISAKISSAAPPLVITPGYASGVGFFARNVPHLHSEIAEHKQKPRECHIV--DWLGTGLSSRPRFSARSLAETEAFFVESLEG-WRAAQKIDKMVLCGHSLGGYLSFAYAERYPSRVEHLVLLSPAGVPHEPEGFRSRLNARLPWLARALLPVVTTAWSAGVTPGSVVRVMGPYGRGFVESLVRRRFGEGETRDLEALADYAYLNVAL-EGSGEHALSQILRPFAWAHSPLCDRIEGLRQRGVTDISFIYGDHDWMDHTHALAV---QKANPS-VPIEVKVVPRAGHQLQLQNPRGFSMAL 379
[Close]
BLAST of mRNA_P-littoralis_Contig863.8.3 vs. uniprot
Match: A0A250WWB7_9CHLO (AB hydrolase-1 domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WWB7_9CHLO)

HSP 1 Score: 234 bits (596), Expect = 2.150e-64
Identity = 137/361 (37.95%), Postives = 207/361 (57.34%), Query Frame = 2 
Query:  716 RWTASSLESLKSAEERLLASLNLNVFDTDI----GNDQHIHTVEGGKGKSEVPVVLCHGYGMGVGGWHLNLGELTASAHVMAKDWLGCGLSSRPRWELEGLEETESFFVDSLESRWRQANEVEKMVLCGHSLGGYLSVCYAEKYPQRIDKLVLASPVGFPEEPEGSREAV-ESRPFSQRNLIKFVRWGWAKGITPGDVVRTMGPLGYRMMMGYSNRRF----QDAEFDKRALGDYLYHNLAATQGSGERALSRLLKPGAWAISPLKHRLPKVDPSVPVHFIFGDRDWMDSTAAQELVDSAEANGTGQKITISKVQ---NAGHQLFLDNPRGFNAELLRVCGVEVDPAAANAAYAATQTAVE 1762
            RW   SL+  +++E +LL     ++   D+    G  + IHTV GG   ++ P+V+  GY  G+G +  N+  L+    ++A DWLG GLS RP +  +G + +E FFV+SL + WR    ++K +L GHSLGGYLS CYA KYPQ +  L+L  P G PE PE  +  + ++   +++ L K   W W KG+TPG V+RT+GPLG R++ GY + RF    Q    ++  +    ++ + A  GSGE AL  LL PGAWA +PL+HRL ++  +VPV FI+G+ DWM    A +L +  +   + +  +  KV+   NAGH +FL+ P+ F+  +L  C   +  A    A +    AVE
Sbjct:   36 RWRQQSLKEGRASESQLLELNRQSLQQVDVPVGDGKQEFIHTVLGGT-SNQPPLVMAPGYAAGLGFYWRNVDGLSPHFQLLAFDWLGTGLSGRPAFVAQGRQASEDFFVESL-NNWRIKMGLDKFLLMGHSLGGYLSACYALKYPQHVSHLLLVCPAGVPEAPENWQSNIMQNATNTRKTLFKTFVWAWEKGVTPGSVIRTLGPLGPRLIDGYVSNRFRQHGQPLNDNEYNIFKRYFYQIIAAPGSGEYALRHLLAPGAWAHAPLEHRLHEL--TVPVTFIYGEEDWMQPKHAVKLCERLKEERSPKVESDLKVEIIPNAGHFVFLEQPQLFDRAVLDACASHLGEAEHQKASSGIPGAVE 392
[Close]
BLAST of mRNA_P-littoralis_Contig863.8.3 vs. uniprot
Match: A0A7R9V5E0_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V5E0_9CHLO)

HSP 1 Score: 230 bits (587), Expect = 5.110e-63
Identity = 132/327 (40.37%), Postives = 184/327 (56.27%), Query Frame = 2 
Query:  806 GNDQHIHTVEGGKGKSEVPVVLCHGYGMGVGGWHLNLGELTASAHVMAKDWLGCGLSSRPRWELEGLEETESFFVDSLESRWRQANEVEKMVLCGHSLGGYLSVCYAEKYPQRIDKLVLASPVGFPEEPEGSREAVESRPFSQRNLIKFVRWGWAKGITPGDVVRTMGPLGYRMMMGYSNRRFQDA----EFDKRALGDYLYHNLAATQGSGERALSRLLKPGAWAISPLKHRLPKVDPSVPVHFIFGDRDWMDSTAAQELVDSAEANGTGQKITISKVQ---NAGHQLFLDNPRGFNAELLRVCGVEVDPAAANAAYAATQTAVEE 1765
            G   +IHTV GG    + P+V+  GY  G+G +      L     + A DWLG GLS RP +   G E+TE+FF++SL + W+    V KMVL GHSLGGYLS CYA KYP+ ++ L+L  P G P+ P+  +   ++ P S+R L K + W W +G+TPG VVRT+GP G  +  GY N RF         D+ A+    ++ + A  GSGE AL  LL PGAWA +PL+ RL ++  SVPV F++G+ DWM    A  L      +G     +  +V+   +AGH +FL+ P  FN  ++  C   +  AAA AA  A   A E+
Sbjct:   68 GKHDYIHTVSGGT-PGQPPLVMAPGYAAGLGFYWRQFDALAPHFSLHAIDWLGTGLSGRPAFSARGREQTEAFFLESLRA-WKSKMGVGKMVLMGHSLGGYLSACYALKYPEDVEHLILVCPAGVPQVPDDWQTRFQTMPTSRRMLFKTLMWTWDQGLTPGAVVRTLGPFGPGLCKGYVNSRFNRGGDGLTADEAAVFHRYFYQITAAPGSGEYALRHLLAPGAWAHAPLERRLHEL--SVPVTFVYGEGDWMRPEHAVNLCKRLREDGAPLCTSDKRVEIIDDAGHFVFLEQPALFNRSVIDACETVLGRAAARAAAHAMPRAAEQ 390
[Close]
BLAST of mRNA_P-littoralis_Contig863.8.3 vs. uniprot
Match: A0A835XLN9_9CHLO (AB hydrolase-1 domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XLN9_9CHLO)

HSP 1 Score: 228 bits (580), Expect = 4.300e-62
Identity = 135/342 (39.47%), Postives = 188/342 (54.97%), Query Frame = 2 
Query:  716 RWTASSLESLKSAEERLLASLNLNVFDTDI----GNDQHIHTVEGGKGKSEVPVVLCHGYGMGVGGWHLNLGELTASAHVMAKDWLGCGLSSRPRWELEGLEETESFFVDSLESRWRQANEVE--KMVLCGHSLGGYLSVCYAEKYPQRIDKLVLASPVGFPEEPEGSREAVESRPFSQRN-LIKFVRWGWAKGITPGDVVRTMGPLGYRMMMGYSNRRFQD-----AEFDKRALGDYLYHNLAATQGSGERALSRLLKPGAWAISPLKHRLPKVDPSVPVHFIFGDRDWMDSTAAQELVD---SAEANGTGQKITISKVQNAGHQLFLDNPRGFNAELLRV 1696
            RW   S     +AE+R+L     N+  +D+    G    +HT+ GG    + PVV+  GYG GVG ++ N   LT    + A DWLG GLS RP ++    E+ E FF+ SL + WRQA  ++  KM+L GHSLGGYL+  YA +YP  +  LVL  P G P+ PE    ++    +S R  L K   WGW KGITPG ++R +GP G +++ GY ++RF       +E +     DY Y  +AA  GSGE AL  LL PGAWA SPL+ RL ++   VPV FI+G  DWM    A +L        A      + +  +++AGH +F+D P  F+  L+ V
Sbjct:   20 RWRQVSRPEGLAAEQRVLGLFPGNMQASDVRVGPGPQAFLHTLSGGPASVDPPVVMMPGYGAGVGFFYRNFPALTQRLRLFAVDWLGTGLSGRPPYKATSREQAEDFFLTSL-ATWRQAAGLDGTKMILVGHSLGGYLAANYALRYPGHVAHLVLVCPAGVPKAPEDWERSITGDKWSWRGQLFKTFMWGWEKGITPGSIIRGLGPWGQKLVYGYVSKRFSHHGEGLSEREIEGFKDYFYQ-IAAAPGSGEYALRHLLAPGAWAYSPLEERLHEL--KVPVTFIYGKHDWMRPEHAVKLCQRLRQERAPRCPSDLAVELIEDAGHFVFMDQPELFDKALMSV 357
[Close]
BLAST of mRNA_P-littoralis_Contig863.8.3 vs. uniprot
Match: A0A835SFI9_CHLIN (AB hydrolase-1 domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SFI9_CHLIN)

HSP 1 Score: 218 bits (555), Expect = 3.660e-58
Identity = 139/370 (37.57%), Postives = 194/370 (52.43%), Query Frame = 2 
Query:  713 MRWTASSLESLKSAEERLL-------ASLNLNVFDTDIGNDQHIHTVEGGKGKSEVPVVLCHGYGMGVGGWHLNLGELTASAHVMAKDWLGCGLSSRPRWELEGLEETESFFVDSLESRWRQANEVE--KMVLCGHSLGGYLSVCYAEKYPQRIDKLVLASPVGFPEEPEG-SREAVESRPFSQRNLIKFVRWGWAKGITPGDVVRTMGPLGYRMMMGYSNRRFQD-----AEFDKRALGDYLYHNLAATQGSGERALSRLLKPGAWAISPLKHRLPKVDPSVPVHFIFGDRDWMDSTAAQELVDSAEANGT---GQKITISKVQNAGHQLFLDNPRGFNAELLRVCGVEVDPAAANA---AYAATQTAV 1759
            MRW  +S +  K AE +++         ++ +      G +  +HT+ GG+   + PVVL  GYG GVG ++ N   L     + A DWLG GLS RP +  +G E+ E FF++SL + WR+A  +E  KM+L GHSLGGYL+  YA +YP+ +  LVL  P G P+ PE   R+ +  +   +  L K    GW  GITPG ++R +GP G  ++  Y + RF       +E +      Y YH +AA  GSGE AL  LL PGAWA SPL+ RL   D  VPV FI+G  DWM    A  L +   A         +++  + +AGH +FLD P  F+  L  V    +  A   +   AYAA  T V
Sbjct:   30 MRWRQTSRQEGKDAEYKVMRLFPGPAGPMHASEVPVGPGREDFLHTLSGGQQGVDPPVVLMPGYGAGVGFYYRNFPSLAQRLRLFAVDWLGTGLSGRPAFRAKGREQAEDFFINSLVA-WRRAAGLEGSKMILVGHSLGGYLAATYALRYPEHVQHLVLVCPAGVPKAPEDWERQWLGDKWTWRGQLFKVFMKGWESGITPGSIIRGLGPWGQSLVYKYVSNRFSHHGEGLSEREVAVFKQYFYH-IAAAPGSGEFALRHLLAPGAWAHSPLEERLH--DLQVPVTFIYGKHDWMRPEHAVRLCEQLRAERAPRAAHDLSVEIIDDAGHFVFLDQPELFDKALTAVVAPYLKTATQRSSANAYAAAGTDV 395
[Close]
BLAST of mRNA_P-littoralis_Contig863.8.3 vs. uniprot
Match: A0A150FY22_GONPE (AB hydrolase-1 domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150FY22_GONPE)

HSP 1 Score: 216 bits (551), Expect = 5.260e-58
Identity = 145/411 (35.28%), Postives = 212/411 (51.58%), Query Frame = 2 
Query:  716 RWTASSLESLKSAEERLLASLN-----LNVFDTDIG--NDQHIHTVEGGKGKSEVPVVLCHGYGMGVGGWHLNLGELTASAHVMAKDWLGCGLSSRPRWELEGLEETESFFVDSLESRWRQANEVE--KMVLCGHSLGGYLSVCYAEKYPQRIDKLVLASPVGFPEEPEG-SREAVESRPFSQRNLIKFVRWGWAKGITPGDVVRTMGPLGYRMMMGYSNRRFQD-----AEFDKRALGDYLYHNLAATQGSGERALSRLLKPGAWAISPLKHRLPKVDPSVPVHFIFGDRDWMDSTAAQELVDSAEANGTGQK---ITISKVQNAGHQLFLDNPRGFNAELLRVCGVEVDPAAAN---AAYAATQTAVE------EMAAAAAIEAEG*TLTWVCIASHPIVGCTRRPPRN 1867
            RW  +SLE  + AE R+L         +   D  +G   + ++HT+ GG G  + PVV+  GYG GVG ++ N   L     + A DWLG GLS RP +     E++E FF++SL + WR+   +E  KM+L GHSLGGYL+  YA ++P+++  LVL  P G P+ PE   R  +  +   +  + K   WGW +GITPG V+R +GP G  ++  Y   RF       ++ +     DY Y ++AA +GSGE AL  LL PGAWA +PL+ RL   D  VPV FI+G  DWM    A  + +        +    +++  + +AGH +F+D P  F+  L+ V    +  A      AAY A  T V        ++AAA+  A     +W   AS    G  + P R+
Sbjct:   21 RWRQTSLEEGREAEYRVLRLFPGLGGPMQARDVRVGPGKEDYLHTLSGGPGNVDPPVVMMPGYGAGVGFYYRNFPSLAQRLRLFAVDWLGTGLSGRPNYAASSREQSEDFFLNSL-AEWRRVAGLENTKMILVGHSLGGYLAANYALRHPEQVQHLVLVCPAGVPKAPEDWERRWLGDKWTWRGQMFKAFMWGWEQGITPGSVIRGLGPWGQSIVYKYVANRFSHHGEGLSQREIDVFRDYFY-SIAALKGSGEYALRHLLAPGAWAHAPLEERLH--DLKVPVTFIYGKHDWMRPEHAVRVCEQLRREREPRAPNDLSVEIIDDAGHFVFMDQPELFDKALINVVKPYLSTARERERAAAYVAAGTEVHVAPEAGTVSAAASAGANPAATSWGFAASGVTHGSVKPPARS 427
[Close]
BLAST of mRNA_P-littoralis_Contig863.8.3 vs. uniprot
Match: A0A813DFD7_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DFD7_POLGL)

HSP 1 Score: 213 bits (543), Expect = 2.820e-57
Identity = 145/367 (39.51%), Postives = 190/367 (51.77%), Query Frame = 2 
Query:  719 WTASSLESLKSAEERLLASL--NLNVFDTDIGNDQH-IHTVE-----GGKGKSEV----PVVLCHGYGMGVGGWHLNLGELTASAH-VMAKDWLGCGLSSRPRWEL-EGLEETESFFVDSLESRWRQANEVEKMVLCGHSLGGYLSVCYAEKYPQRIDKLVLASPVGFPEEPEGSR----EAVESRPFSQRNLIKFVRWGWAKGITPGDVVRTMGPLGYRMMMGYSNRRFQDA------EFDKRALGDYLYHNLAATQGSGERALSRLLKPGAWAISPLKHRLPKVDPSV-------PVHFIFGDRDWMDSTAAQELVDSAEANGTGQKITIS-------KVQNAGHQLFLDNPRGFNAELLRVCGV 1705
            W  +S E L  AE  LL  +   + + D   G D H IHT+         G +      PVVL HGY MG   W  +L  L  + H V+A DW G GLSSRP + L +G E  E FFV+ +E  WR++  + +MVL GHS GGY + CYA KYPQ ++ L+LASPVG  E+  GSR    E  +  P  QR L+      W    TP  VV+ +GP G R+   Y +RRF++       E DK A  +YL H L A  G  E  L  LL+ G WA  P+  RL +   ++       P+  ++G+ DWMD+     L  + E  GTG     S       +VQ AGHQLFLDNPR FNA + R  G+
Sbjct:   31 WIPTSAEQLAQAEAALLKVVPREVQILDVPAGPDGHYIHTLRVKADAAAAGAAHTGGLAPVVLIHGYFMGSASWAHSLAPLAEAGHEVLAVDWPGWGLSSRPDFPLGQGPEACEGFFVEQIED-WRKSLGLGRMVLLGHSFGGYFAACYAMKYPQHVENLILASPVGMGEKQPGSRFSDPEKRKELPLWQRALVSVAESMWEARFTPMGVVKGLGPFGSRLTGWYVDRRFENVRAAGTMEADKEATQNYLTH-LGAQPGGSEYCLGELLEFGVWARLPIAKRLAEKMKALGEQHRVPPMTILYGEADWMDAATGVWL--AGELAGTGCASASSEPGPEVIRVQGAGHQLFLDNPRAFNAAVRRALGI 393
[Close]
BLAST of mRNA_P-littoralis_Contig863.8.3 vs. uniprot
Match: A0A8J4D431_9CHLO (AB hydrolase-1 domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4D431_9CHLO)

HSP 1 Score: 215 bits (548), Expect = 1.210e-56
Identity = 127/345 (36.81%), Postives = 186/345 (53.91%), Query Frame = 2 
Query:  716 RWTASSLESLKSAEERLLASLN-----LNVFDTDIG--NDQHIHTVEGGKGKSEVPVVLCHGYGMGVGGWHLNLGELTASAHVMAKDWLGCGLSSRPRWELEGLEETESFFVDSLESRWRQANEVE--KMVLCGHSLGGYLSVCYAEKYPQRIDKLVLASPVGFPEEPEG-SREAVESRPFSQRNLIKFVRWGWAKGITPGDVVRTMGPLGYRMMMGYSNRRFQD-----AEFDKRALGDYLYHNLAATQGSGERALSRLLKPGAWAISPLKHRLPKVDPSVPVHFIFGDRDWMDSTAAQELVDSAEAN---GTGQKITISKVQNAGHQLFLDNPRGFNAELLRV 1696
            RW  +SL+  ++AE R+L         +   D  +G   + ++HTV GG    + PVV+  GYG GVG ++ N   L     + A DWLG GLS RP +     ++ E FF+ SL + WR+A  +E  KM+L GHSLGGYL+  YA +YP+ +  LVL  P G P+ PE   R  +  +   +  + K   WGW KG+TPG ++R +GP G  ++  Y   RF       ++ +     +Y Y ++AA  GSGE AL  LL PGAWA +PL+ RL ++   VPV FI+G  DWM    A  L +             +++  +++AGH +FLD P  F+  L+ V
Sbjct:  103 RWRQTSLQEGRAAEHRVLRLFPGLGGPMQASDVKVGPGREAYLHTVSGGPANVDPPVVMMPGYGAGVGFYYRNFPSLAQRLRLFAVDWLGTGLSGRPPYRARTRQQAEDFFLGSL-AEWRRAAGLEGSKMILVGHSLGGYLAANYALRYPEHVQHLVLVCPAGVPKAPEDWERRWLGDKWTLRGQMFKVFMWGWEKGVTPGAIIRGLGPWGQNLVYKYVANRFSHHGEGLSQREIDVFKEYFY-SIAALPGSGEYALRHLLAPGAWAHAPLEERLHEL--KVPVTFIYGKHDWMRPEYAVRLCEQLRTERSPSAPNDLSVEIIEDAGHFVFLDQPELFDKALINV 443
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig863.8.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGP8_ECTSI4.590e-22886.02AB hydrolase-1 domain-containing protein n=2 Tax=E... [more]
A0A835ZEV4_9STRA1.080e-10649.85Alpha/Beta hydrolase protein n=1 Tax=Tribonema min... [more]
A0A7S4DX92_9EUKA5.100e-6544.34Hypothetical protein n=2 Tax=Lotharella globosa Ta... [more]
A0A250WWB7_9CHLO2.150e-6437.95AB hydrolase-1 domain-containing protein n=1 Tax=C... [more]
A0A7R9V5E0_9CHLO5.110e-6340.37Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
A0A835XLN9_9CHLO4.300e-6239.47AB hydrolase-1 domain-containing protein n=1 Tax=E... [more]
A0A835SFI9_CHLIN3.660e-5837.57AB hydrolase-1 domain-containing protein n=1 Tax=C... [more]
A0A150FY22_GONPE5.260e-5835.28AB hydrolase-1 domain-containing protein n=1 Tax=G... [more]
A0A813DFD7_POLGL2.820e-5739.51Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A8J4D431_9CHLO1.210e-5636.81AB hydrolase-1 domain-containing protein n=2 Tax=V... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig863contigP-littoralis_Contig863:37136..45752 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LGP8
PFAMsAbhydrolase_1,Hydrolase_4
Model size3125
Max annot lvl2759|Eukaryota
KEGG rclassRC00037,RC00039,RC00094
KEGG koko:K13535,ko:K13699
KEGG ReactionR09038,R09381
KEGG Pathwayko00564,ko04923,map00564,map04923
Hectar predicted targeting categoryother localisation
Exons10
Evalue8.17e-236
EggNOG OGsCOG0596@1|root,KOG4409@2759|Eukaryota
Ec32 ortholog descriptionAlpha/beta hydrolase fold-1
Ec32 orthologEc-07_005470.1
EC2.3.1.51
Description1-acylglycerol-3-phosphate O-acyltransferase activity
Cds size1569
COG categoryEH
BRITEko00000,ko00001,ko01000,ko01002,ko01004
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig863.8.3prot_P-littoralis_Contig863.8.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig863 38460..45520 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791738.155916-UTR-P-littoralis_Contig863:37135..384591680791738.155916-UTR-P-littoralis_Contig863:37135..38459Pylaiella littoralis U1_48UTRP-littoralis_Contig863 37136..38459 -
1680791738.289324-UTR-P-littoralis_Contig863:45520..457521680791738.289324-UTR-P-littoralis_Contig863:45520..45752Pylaiella littoralis U1_48UTRP-littoralis_Contig863 45521..45752 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791738.1709576-CDS-P-littoralis_Contig863:38459..386031680791738.1709576-CDS-P-littoralis_Contig863:38459..38603Pylaiella littoralis U1_48CDSP-littoralis_Contig863 38460..38603 -
1680791738.1835372-CDS-P-littoralis_Contig863:39133..392291680791738.1835372-CDS-P-littoralis_Contig863:39133..39229Pylaiella littoralis U1_48CDSP-littoralis_Contig863 39134..39229 -
1680791738.1974401-CDS-P-littoralis_Contig863:39825..400121680791738.1974401-CDS-P-littoralis_Contig863:39825..40012Pylaiella littoralis U1_48CDSP-littoralis_Contig863 39826..40012 -
1680791738.2130811-CDS-P-littoralis_Contig863:40494..405941680791738.2130811-CDS-P-littoralis_Contig863:40494..40594Pylaiella littoralis U1_48CDSP-littoralis_Contig863 40495..40594 -
1680791738.22482-CDS-P-littoralis_Contig863:40991..410941680791738.22482-CDS-P-littoralis_Contig863:40991..41094Pylaiella littoralis U1_48CDSP-littoralis_Contig863 40992..41094 -
1680791738.235241-CDS-P-littoralis_Contig863:41671..417981680791738.235241-CDS-P-littoralis_Contig863:41671..41798Pylaiella littoralis U1_48CDSP-littoralis_Contig863 41672..41798 -
1680791738.244974-CDS-P-littoralis_Contig863:42300..424881680791738.244974-CDS-P-littoralis_Contig863:42300..42488Pylaiella littoralis U1_48CDSP-littoralis_Contig863 42301..42488 -
1680791738.257229-CDS-P-littoralis_Contig863:42944..430311680791738.257229-CDS-P-littoralis_Contig863:42944..43031Pylaiella littoralis U1_48CDSP-littoralis_Contig863 42945..43031 -
1680791738.2684565-CDS-P-littoralis_Contig863:44073..443641680791738.2684565-CDS-P-littoralis_Contig863:44073..44364Pylaiella littoralis U1_48CDSP-littoralis_Contig863 44074..44364 -
1680791738.2787974-CDS-P-littoralis_Contig863:45274..455201680791738.2787974-CDS-P-littoralis_Contig863:45274..45520Pylaiella littoralis U1_48CDSP-littoralis_Contig863 45275..45520 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig863.8.3

>prot_P-littoralis_Contig863.8.3 ID=prot_P-littoralis_Contig863.8.3|Name=mRNA_P-littoralis_Contig863.8.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=523bp
MFICPLCYFTAAFLLSKNLRSAVENYHGQPLSIHKYFPSSNFVAPLQYVQ
RAIGKVTATRCVHYFRPRPWASIQKAPLEQHQAATKTAQDQQGVVTTAGG
LSAAAAATTTTDLSSELSSPATAGGPLRDADNGAGGGGDMAAAAAARPSC
RVGLRESFSKMRWTASSLESLKSAEERLLASLNLNVFDTDIGNDQHIHTV
EGGKGKSEVPVVLCHGYGMGVGGWHLNLGELTASAHVMAKDWLGCGLSSR
PRWELEGLEETESFFVDSLESRWRQANEVEKMVLCGHSLGGYLSVCYAEK
YPQRIDKLVLASPVGFPEEPEGSREAVESRPFSQRNLIKFVRWGWAKGIT
PGDVVRTMGPLGYRMMMGYSNRRFQDAEFDKRALGDYLYHNLAATQGSGE
RALSRLLKPGAWAISPLKHRLPKVDPSVPVHFIFGDRDWMDSTAAQELVD
SAEANGTGQKITISKVQNAGHQLFLDNPRGFNAELLRVCGVEVDPAAANA
AYAATQTAVEEMAAAAAIEAEG*
back to top

mRNA from alignment at P-littoralis_Contig863:37136..45752-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig863.8.3 ID=mRNA_P-littoralis_Contig863.8.3|Name=mRNA_P-littoralis_Contig863.8.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=8617bp|location=Sequence derived from alignment at P-littoralis_Contig863:37136..45752- (Pylaiella littoralis U1_48)
ACAGTTCCAGGTGTACGTCATGCTATAATCTCATCATTCATGTCATGATC
TCATTCCACGCGATAACGTGCTGTATCCATGCCACCATTCCTAATTAAAT
TTCATTGGTTCGGGGCATATTTGTTTCGCTAAAAAACGGAAAGCCAAGCA
CAAACAAGCTTGAAGAAGCTTGAAAAACAAAATCACGACATGGACACAAA
AAAAAGCTGCAGCGCGCCACGCGAAACAAAATATGTTCATATGCCCACTC
TGTTATTTTACCGCTGCTTTCCTGCTGTCAAAAAACCTACGCAGTGCTGT
TGAAAACTACCATGGGCAACCACTCTCCATCCACAAGTACTTCCCCTCCT
CCAACTTCGTTGCACCACTCCAATACGTCCAAAGAGCCATCGGCAAAGTC
ACCGCCACGCGCTGCGTCCACTACTTCAGACCAAGACCATGGGCATCCAT
TCAGAAGGCACCACTTGAGCAGCACCAGGTGCCCATCGCCCGCTGCTTGC
TTACAGATGCCCGTACTCCAGCGGTAGCCCCTATGATAGCTCGCAAACCC
TGAACAACGTGCATATGCCCCCATGCGCAGCCGCGCCCATGATCGGATCG
GAATATTCCCACCGCCCGTTTTCCAAACACCAGACCACTGAATCCAAAGG
CCCTAGTCCTGCACCTGATGCTGGGACGTGGCTGCTGTGAATTCTAGAAT
CAAAACCTCCCCGTTCGTACTTGGTGCCCTCCTCCGATCGTAGAAGATCG
GTGCTTTCGTGCAATGGTAGATGACAGCAATAAACAACTGGTTATTGCTT
TCGTGCCTTCTGCTTTTTGGGGGCGCCGTGTATCAGAATAAGGGTACCAA
CAGGGGTACGTCGGTACCCGGGTACCCTTGTACCCGACTTCGAATTACCC
GCGGGTGCAAAATTACTACCCGGACCCGATCGGGTAACGCATTACCCGGG
TACCCGACTCGGGTACCCGGGTAATTTTTAGACGGGGCAACACTCTAGAA
CGAACCCATTTTTCTCATTCACCTTGGAAGGCCTTCTGGTTCGTGCGGCG
AGTTATTTTCATCTTTCTCCCGCTATTCCGCTATTCGCTATTCCGCCACC
GTGGCTGGAGCAGTGACCTTCTTTCCGCTCTCTCTCTCTCTCTCTCTCTC
ACTCTCTCTCTCTCTCTACCGTCCCCACCACACATCATCTTTTGACCTTG
TGCCTGCTGGAAGGAAACGATCAATAATACCTCCAAATTACGCCCTAAGG
TGTCGTAGCGTCTCGTGAATTTCAGTCGAAGAGAGAGAACAATAGAGAGT
CCAGAAAAGAAGTACCCAGATCATCCTGTCAGCACTCCACCGGTACGTAC
TCAGATCGATTTTCGATTTTACGCTGGCAATGGGACAGGCAGCAACAAAG
ACTGCACAAGACCAGCAGGGAGTGGTGACCACCGCGGGCGGCCTCTCAGC
AGCAGCAGCAGCAACAACAACTACAGATTTATCCTCCGAGCTTTCATCGC
CAGCAACAGCTGGGGGCCCTCTACGAGACGCAGACAACGGCGCCGGCGGC
GGTGGTGACATGGCAGCAGCAGCAGCAGCTCGTCCCTCTTGTAGAGTCGG
CCTTCGCGAGAGCTTTTCCAAGATGCGTTGGACCGCCAGCTCCTTGGAGT
CCCTCAAGAGCGCGGAGGAGAGGCTTCTCGTGAGTGTGATATTTTATGTA
CCAAAGCAGCACAGCTACTTGTTGTTTACAGCAGGCAATTTTGGAAAGTG
CGTATTTGTTTGTCGACGAAGCGAGAGCGGTGGACCGGTGACTTGGACCA
TACGAAGACTGGTTCGCGGGCAGAACAACGTCCCCCCCCACCCCCCTACT
ACTGCTGTAGAGACATCCGTGTTTCCGTACCTTGTATGCATTTCCGTACG
GCAGACGAAGGTCTAGATTCGGCTGGCGACGAAACAAGGTGTACCACTGT
ACATCACTCCCTGTGCTTCAAAGCTGTTGAGATGCACATCTACAGCAGTA
CGAGTACGTGAGAGACGAATACTTACATGCATCGATGCTCGAAAGACCTT
TTCGAGACACCCAGGCTGAAATCCCCAGGAAAAGACAAATAGTCCATTTG
TAGGGAGTTCTGGAAGGATACACTTACGTTAGGGTGGGAGCCGCACGTAA
CAAGCTGAGATACTACGCAAGCAGGTCGGGCAACCACAAGCGTGTCTTAC
TGGTGCTATGTACAGTATACTCTGTACTGCTGCTGCCATCCATCCACATA
CCCCCGGTCTCTCTCCCTGTCTGCTTGTCTCTCTCACTCCCGCTCATTTT
GCCTTCCTCCAAGTTGAATGCCGAACGAACGCGCAGAGCCATTCTAAGCT
ATGCACTTTCCAAGGACAGCAGTACATTGCTCGGGCAGCGGACTATGAAA
TCGTCTTATGACTTTCATCATTATGTCACAAGCAGACAACTTTTCATTGA
CAGGCTTACTGCAGCAGCAGTTGCAGTACGACAGCAGTACCGTAAGCCGT
TTCACCACCACGAGGCCGGCTTGTTTTCTTTGCCGGATGTTCGTTGTTGC
TTGCACAGCCCGTATGCTGGGTATTATGTACTCGTACCGAGCGTGAGTAT
CCCAATCGCTTACGTTCGTTTGTGCTTTTCGTTTCATCCATCCATCCTTC
TGCTCTCGCTGCTTTTGCTACCGCTGCTCCTGTTGCCTTTGCTGCTGCTG
CTGCTAATGCTCCTTGGAAAGGCTTCGTTGAACCTGAACGTCTTCGACAC
CGACATCGGGAACGACCAGCACATTCACACAGTGGAAGGGGGCAAGGGAA
AGTCGGAGGTGCGTGCACTACTGCTCGTATCGTACCGCTGGTTATGTTGT
TGTTGTTGTTGTTGTTGTTGCTGTTGTTGTTGTCGTTGTCGTTGTTGTTG
TCATTGTCGTTGTCGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTT
GTTGTTGTTGTTGTTGTTGTCGGTGTCGTTGTCGGTGTCATTGTTGCTGT
TGCTGTTGCCGTCGTCGTCGTCGTTGTTGTTGTTGTTGCTGTTGTCGGTG
TTGGGGGCGATAATTGCAAACACCTCCGAAGAGCGCCCAAATATCGGTGG
CGACTTGACGTTTAATATTAAGAACAGTGCTACCGTACCCCGTCTCGAAG
GCGATGCGTGCTCGGTTGGTCGCTGGTACAGTAAAACGACTTAGCAAGGG
AATCAACAAACGGCATTACGAAAGGGTTTTCCTCCTTCCGCCACCGCCGC
CGTCGTGCTGGCAGGTCCCCGTGGTTTTGTGCCACGGTTACGGCATGGGC
GTTGGAGGTTGGCACCTTAATCTCGGCGAGCTGACGGCGTCCGCGCACGT
CATGGCGAAGGACTGGCTGGGCTGTGGTCTGTCTTCCAGGCCTCGGTGGG
AGCTGGAGGGACTCGAGGAAACAGAGTCATTTTTCGTTGACTCGCTCGAG
AGGTGAGGGTTTTGCGTGTGTGGGTCGGTGAGAGGTGAGGTGTGGCGCGC
TCTTCTTTTCAGCCCACCTTCTTGTGTGTGATGCTATTTTTATAAAATAT
TTCACCCTCTGCGTGATGCTATTTTTATAAAATATTTCACCCTCTGTGTG
ATGCTATTTTTATAAAACATTTCACCCTCTGTGTGATGCTATTTTTATAA
AATATTTCACCCTCTTGATTTATTAGTGATATTTTTTCGCGGTGGTGGGT
GTTTTTTTTTTATATACTGTTGTGGGTGGTGGGTGTGGTTTGTGCTTGTT
TTGTTCGCAAATACCGAGTTCACGGGTTGGCCAACGAAAACATGTCAGCT
CGTGTGTGTAATGGCATTCTCCGAGGCAGATCGCGACGGCACGTGTCGGG
GTGAACTACACCTCTATGCATCGCCACCGTTCTTCGTACCTTCCCGCTTG
AACACGCACGCGCGTGTGTACTGCTGTGTCGTGGTTGCCTTCTCTCCTGA
TGAGCAGATGGCGTCAGGCAAACGAGGTGGAAAAGATGGTGCTGTGCGGC
CACTCCCTGGGCGGCTACCTTTCGGTGTGCTACGCCGAAAAGTACCCACA
ACGCATCGACAAGCTTGTCCTGGCGAGTCCAGTGAGTCCGGTCTCGAACA
CCATTTCTATTTTCCGCACCCTCGTGCAAGATCGATCCTCTGGACCGATT
ACGACAGGAGCGGTCACCTACACCACACTGCCCTTACACGAGGCAGAAAA
GCAAATGTTGAAGGCGCACGTAGATCGTTGCAGACAGCACTTATTTTTTT
GTTTCGTCGACCCCGCAGAAGTGATGCGCATCCTACGGAAGGAAAACCCC
CTGCCGCAGCCGCGTTTTTTTTTTTTGACATATCCGCAGCGAATAAAGAA
ACGGCAGCGTCATCACCTTAAAATGGTCGATGCGGCGGTTTGTTCAGATT
AAATCTTTCCACGTGCAAGCTTTCCGAAGAGGTACTGTTTGTTGTTGGCT
CATAACCTCTTGGTGCGGAGGAACGCTTGAAGAAGGCACGCATGATCAGG
TAGGTACGCCTCCATTACCTCTCCCCCTCTCATCCTTCCAATATGCAGTA
CTTCGAAAGGTTATTCGTTCGTATTCTAATCATCTTTCCCGCCACGCGCT
AAAAACGTGCCCCTACCTTCTGCAACCCCCGTGACCAACCTACGGCCTCT
GGCGAAAGGTTGGCTTTCCGGAAGAGCCGGAGGGGTCCAGGGAGGCCGTC
GAGTCGAGGCCGTTCAGCCAGAGGAACCTAATCAAGTTTGTGCGGTGGGG
CTGGGCGAAAGGTGAGGTAGAGGAAAGGGAGGGTCACGGGGGGGTGGGGG
GGGAGTGATAGGAGAGGTAAAGAATGAAATACTATGCGAAGAAAGCAGGA
TTGGTTATGGGGTGGAGCCGGGGAGCTAGAAATGTAAGGTGAAATTATCC
TGTACTAAACTTTCCTGAACAATTTTTAAGCTTATTATTTTCTCCAGTGT
GTCTTTTGCGCTCTGTTTCGTAGTATTTTCACGGCGAATACCGTTTAATC
CCAATCGGTCTACGAAAAATTCGGCGCACTCAGGATAGACGCCCAAACGA
CGTTGCCTGCCCCTCTCACTCATCACTTTCTACCGACCTTCGTCGCGCGC
CTCCTGTTTTTGATTTCATCGTCTGTCAATGACATCTCTGGATCTGGACA
CGTCCCAGGTATCACGCCTGGGGATGTCGTCCGCACGATGGGGCCGTTGG
GATACCGTATGATGATGGGCTACTCGAACAGACGATTTCAGGACGCGGAG
TTTGACAAGTAAGTACGGCGTTCGGGCAGGCAGCGTCCTTCTATTGTAGG
GTGATGTGTGTTGCAAGCACGCCTCTATTAGCGGGGGCTTTAGGTCTTCT
GGTTCGACTCCTGCCGCGGTGCCTATTGCGTCATATGGTGCTTTTACTTG
GAGGGGAATACGGGGATTGCCAAAGGAGGGGGAGGGTTTGTTCGGAAGCG
CCCTCTTTCAATCGGCAGCCCCGTGTACCCTCTTCCACCCCGTCTCTCTC
CTACCGCACACGCGCGTGACTCAACCAGTTATCATATACTTTGAGTACGA
GATTTAAACCAAAGACTTTTGTTCTTTTTTGTTTTTTTTTGCTTCTCCTT
CCGTATCCGCCTCTGCGAGACTAGAGAAGTCGTCTCCCAATTCGATACTG
CGACGTACGCCGAAGTATTGTTCTTCTCCACGCCCCCCACACCGCATAAT
TACCCACCACCCCTCGCCCCCGCCCCCCCCTCCAAAACAGGCGGGCGTTG
GGTGACTATCTTTACCACAACTTGGCGGCCACTCAAGGCAGCGGGGAGCG
GGCGCTCAGCCGCCTTTTGAAACCGGGGGCGTGGGCGATCTCTCCCCTGA
AACACCGCCTCCCCAAGGTGGACCCCTCGGTCCCGGTGCACTTCATATTC
GGCGACAGGGACTGGATGGACTCTACCGTGAGTCACCGAACATACTGTAA
TTGGTTTTCGACTGGTGCCTGTCGCAACGAATCAATTACAAAACGCCCTC
ACTATGTCACGGGCGCCATCCGCGGCGTGCCGTGGGAGCCACGAGGGAAG
AGGGGGAGGGGCTTGGTTCGTGTGGAGGGGATGGTAGTGGTGTGATAGCC
TGCACTTTTTCGTATCCGTGCAGCAGTCGGTGCCTTTTATCGTTGGCTCG
TCGAAGGGAAAGCTACTGTTTGTTAGTTACTGCTTGTTGCCTGCGAAGAT
CACGTTAATGCACATGTGTGGAAAAAAACGAAAGAAAACTAAAAGACCCG
TGGATGAAAGCTGCAGCAGTACAAGTATGGAAAAGCTGAACGCTGATAGC
CTTCGAGAGACGGGGGGAGGGAATGTGGGGGTACACGAACGGTCGGCGGA
AAGTGGGAGGTGGCCGCCGAGACTCTGACGGTCGGCTGTATGATGTACCT
CGAGTAGAGTACTAGAAACCTTTCGCATTCGCGAAACGGCTGACCTTCTT
GCCTGGCTTTGCCGTCCGACGCTCCCGCTCGTTTCATCCGATCATAACGT
TTGCTGTTTTTGTTCCGAAACAGGCAGCTCAAGAGCTCGTGGACAGCGCG
GAGGCTAACGGAACAGGCCAAAAGATCACCATCAGCAAAGTACAGAACGC
GGGGCACCAGCTGTTTCTGGTGAGCGGTACAATCTAGCCGGCCGGCACAT
CGCAATAACGTAACAACGCCTTTTCAGGTTTTCCCCGGCACGGCGCGCGT
GCTTCTAGGATAGCTGTCGGTTCTTGTCTCCAAGCAGAGACGCCTGCCCT
TGCGTGTATTGTGCCAGCGTGAAAATGGCAAGATTATCGAGCACAGCAGA
CAAGGACAAAGCGATCCACATCATGGCGTCCTGGCGGGAAGGTCGAAAGA
AATGTACCAACCCAACCCCCGGTATTATAGCCTTCCCTTTCTTCCCGTCG
CCCCCCCTTGTCGAACTTTCGTTCGTGGCGGGGAGAGGGAACCTTACACG
ATACTTGAGGTCACGAACGTCGGAACGGTCTTCAATGCGCAGATAAAACA
ACGGTAACAATGACAAACAGCATTACCACCACCACCACCACCGCTGCCAC
CACCACCACCAGCAGCAACAATAACAACAAGAGACGCCCTTTTTCCGACC
TCGTTCTAATCGTAACCCAAACTCCGCCACCGTGTACCGTCGCACGCAGG
ACAACCCGCGAGGCTTTAATGCGGAGCTGCTCCGCGTGTGCGGGGTGGAA
GTGGACCCCGCTGCTGCCAACGCAGCCTACGCCGCCACCCAGACCGCGGT
CGAAGAGATGGCGGCCGCGGCTGCCATAGAAGCCGAAGGTTAAACGTTGA
CATGGGTGTGTATAGCGAGCCACCCAATCGTTGGTTGCACGCGACGTCCT
CCGCGGAATGCGCTTACTCGAGATGTTTCCCTCTTTGTATGCACGTAAAG
CCTGTGTGCGCACAACTCGTCACTCTCTTGTTGGTTGTTGTCTTGTGGCG
GCCGACGAGGAGGTTGTTTGTTGATTTGATTTTTTTTTAACTTCGTGCCG
TGAAACCTATTTTAGGGTTTCATCTCTCGAGCTTTTGGTGGCGAGTTGGT
GTGTTTTTTTTTTGTTTTCGCCCCCGAAGGTCTCTACTAGCTCAATACGT
TTATGTTTTTTTCCCCGTGTGTCTTGCGTATGCCTTAGTTGACTTTCAGC
CGATTTCTCGAAGTAAATTAAAAAATATTTTGTGTGCGATTTGCGGCCGA
CCCACCGGTGACCGGCAAGCACAGCTGAGGCCGTGTCTGCTTGCTGGTGG
AGTGCAATAGAGGAACTGTTCCCTCTCTACGGCCGCTCTGTTGTTGATAC
GTACGGTGGGCGAGGTCTTGTGTCCGAGCCGGCTAAGTTGTGATCTGGTC
TGTAGGCCAATTTTGTTTTGAGTTCATCGTCGACTGGACTACTTACTGCT
TTGGACGAGCCGATGTGATCGGTCGAGTGGATTGTCATGAGTGACTGCTG
TGATTGGCTCGGTTTGATACTGTTTTTATGATGGCATAGTTGGTGGGTCG
AAATTTTTGGCCGGCGGCTGGATCGAAGACTACGATCGGTCGGATGTTTT
GATAATTTTTTTAAAAGGTGTACTTCGAAGTATGATGTGTATCCTCGAAT
GTCCGAATTGGAGGATCTCGCGAAAGATTTAAAGAACAAGCAGTAAAGGG
ATACCTATGAACCGAGCCACCTTTGCTATTTACTTATTTTTATAGCCCTG
AATCCGCTTTGATAAATTCAAGATCATGATTCTTAATAATCGGGTAGTTG
GAACCTTGCAAAGGTTTTGGGCTCAAAATATTTGGCAAGGATGTTGAGTG
TTTTTTCCCGACATTTCGAAAGCTCTATGTACTGTTTTGTGACTGCTGTG
CACAGCCAGTGCACATGTTCATGCGGGTGTCGGACCTGGTGGACAATTTT
GTATCCTTATACCGCACGCCCCAGTATGGCGTGGACCGTGCACGATCCCG
GGGGGGCGAACAACACCTCGGCCCCCGCCCGGCAGACTGACGTCTCCTCG
AACCTGTCGGTATTTTGTATTTTATCCATCGTAAAGTGTGGTGCGTATGT
CGTGTTTGTTGTCATCCCATCTTTAGGCTGGGTCTTAACCGGAAATCAAA
ATCAAAGTTAGAAATCA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig863:37136..45752-

>mRNA_P-littoralis_Contig863.8.3 ID=mRNA_P-littoralis_Contig863.8.3|Name=mRNA_P-littoralis_Contig863.8.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1569bp|location=Sequence derived from alignment at P-littoralis_Contig863:37136..45752- (Pylaiella littoralis U1_48)
ATGTTCATATGCCCACTCTGTTATTTTACCGCTGCTTTCCTGCTGTCAAA
AAACCTACGCAGTGCTGTTGAAAACTACCATGGGCAACCACTCTCCATCC
ACAAGTACTTCCCCTCCTCCAACTTCGTTGCACCACTCCAATACGTCCAA
AGAGCCATCGGCAAAGTCACCGCCACGCGCTGCGTCCACTACTTCAGACC
AAGACCATGGGCATCCATTCAGAAGGCACCACTTGAGCAGCACCAGGCAG
CAACAAAGACTGCACAAGACCAGCAGGGAGTGGTGACCACCGCGGGCGGC
CTCTCAGCAGCAGCAGCAGCAACAACAACTACAGATTTATCCTCCGAGCT
TTCATCGCCAGCAACAGCTGGGGGCCCTCTACGAGACGCAGACAACGGCG
CCGGCGGCGGTGGTGACATGGCAGCAGCAGCAGCAGCTCGTCCCTCTTGT
AGAGTCGGCCTTCGCGAGAGCTTTTCCAAGATGCGTTGGACCGCCAGCTC
CTTGGAGTCCCTCAAGAGCGCGGAGGAGAGGCTTCTCGCTTCGTTGAACC
TGAACGTCTTCGACACCGACATCGGGAACGACCAGCACATTCACACAGTG
GAAGGGGGCAAGGGAAAGTCGGAGGTCCCCGTGGTTTTGTGCCACGGTTA
CGGCATGGGCGTTGGAGGTTGGCACCTTAATCTCGGCGAGCTGACGGCGT
CCGCGCACGTCATGGCGAAGGACTGGCTGGGCTGTGGTCTGTCTTCCAGG
CCTCGGTGGGAGCTGGAGGGACTCGAGGAAACAGAGTCATTTTTCGTTGA
CTCGCTCGAGAGCAGATGGCGTCAGGCAAACGAGGTGGAAAAGATGGTGC
TGTGCGGCCACTCCCTGGGCGGCTACCTTTCGGTGTGCTACGCCGAAAAG
TACCCACAACGCATCGACAAGCTTGTCCTGGCGAGTCCAGTTGGCTTTCC
GGAAGAGCCGGAGGGGTCCAGGGAGGCCGTCGAGTCGAGGCCGTTCAGCC
AGAGGAACCTAATCAAGTTTGTGCGGTGGGGCTGGGCGAAAGGTATCACG
CCTGGGGATGTCGTCCGCACGATGGGGCCGTTGGGATACCGTATGATGAT
GGGCTACTCGAACAGACGATTTCAGGACGCGGAGTTTGACAAGCGGGCGT
TGGGTGACTATCTTTACCACAACTTGGCGGCCACTCAAGGCAGCGGGGAG
CGGGCGCTCAGCCGCCTTTTGAAACCGGGGGCGTGGGCGATCTCTCCCCT
GAAACACCGCCTCCCCAAGGTGGACCCCTCGGTCCCGGTGCACTTCATAT
TCGGCGACAGGGACTGGATGGACTCTACCGCAGCTCAAGAGCTCGTGGAC
AGCGCGGAGGCTAACGGAACAGGCCAAAAGATCACCATCAGCAAAGTACA
GAACGCGGGGCACCAGCTGTTTCTGGACAACCCGCGAGGCTTTAATGCGG
AGCTGCTCCGCGTGTGCGGGGTGGAAGTGGACCCCGCTGCTGCCAACGCA
GCCTACGCCGCCACCCAGACCGCGGTCGAAGAGATGGCGGCCGCGGCTGC
CATAGAAGCCGAAGGTTAA
back to top