mRNA_P-littoralis_Contig861.5.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig861.5.1 vs. uniprot
Match: A0A6H5K2M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M3_9PHAE) HSP 1 Score: 279 bits (713), Expect = 4.220e-86 Identity = 151/309 (48.87%), Postives = 181/309 (58.58%), Query Frame = 1
Query: 1 LFVVFELSREPGRQMLNIFDNSTGHAAYGPDALTAQNVAAGAGGQQAVPRPFVHEGRRISTVFEEGSVLLFDTNPTPKKA---------KEGDGSECYVVVGKG--------------------------------------------GEDTEPDRQGEGDT-------------------RRCCLRFVLSNLPAFKEQKNRVEEIFEAAGHRCIFLQKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHRSSTDRVDAVL 711
+F FE+SREPGRQML +FDNSTGH AY PDAL AQN+ A GG+Q PR F + GR I T F EG VL F ++P +K K G SE + V KG GE + +GEGD+ RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAI+R WG++K+IERRVCDYSV SLL RLP TLS++SLSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT+HRS TD D VL
Sbjct: 352 IFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTEAEAVGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIQRFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 660
BLAST of mRNA_P-littoralis_Contig861.5.1 vs. uniprot
Match: A0A6H5L7W4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W4_9PHAE) HSP 1 Score: 275 bits (702), Expect = 8.030e-82 Identity = 152/323 (47.06%), Postives = 181/323 (56.04%), Query Frame = 1
Query: 1 LFVVFELSREPGRQMLNIFDNSTGHAAYGPDALTAQNVAAGAGGQQAVPRPFVHEGRRISTVFEEGSVLLFDTNPTPKKA-----------------------KEGDGSECYVVVGKG--------------------------------------------GEDTEPDRQGEGDT-------------------RRCCLRFVLSNLPAFKEQKNRVEEIFEAAGHRCIFLQKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHRSSTDRVDAVL 711
+F FE+SREPGRQML +FDNSTGH AY PDAL AQN+ A GG+Q PR F + GR I T F EG VL F ++P +K K G SE + V KG GE + +GEGD+ RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++K+IERRVCDYSV SLL RLP TLS++SLSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT+HRS TD D VL
Sbjct: 786 IFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTEAEAVAKKRHGKRLGVFPIGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 1108
BLAST of mRNA_P-littoralis_Contig861.5.1 vs. uniprot
Match: A0A6H5K7K1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K1_9PHAE) HSP 1 Score: 260 bits (664), Expect = 3.100e-81 Identity = 150/357 (42.02%), Postives = 181/357 (50.70%), Query Frame = 1
Query: 1 LFVVFELSREPGRQMLNIFDNSTGHAAYGPDALTAQNVAAGAGGQQAVPRPFVHEGRRISTVFEEGSVLLFDTNPTPKKA---------KEGDGSECYVVVGKG--------------------------------------------------------------------------------------------GEDTEPDRQGEGDT-------------------RRCCLRFVLSNLPAFKEQKNRVEEIFEAAGHRCIFLQKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHRSSTDRVDAVL 711
+F FE+SR+PGRQML +FDNSTGH AY PDAL AQN+ A GG+Q PR F + GR I T F EG VL F ++P +K K G SE + V KG GE + +GEGD+ RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++K+IERRVCDYSV SLL RLP TLS+++LSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT+HRS TD D VL
Sbjct: 111 IFAAFEISRQPGRQMLEVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTEAEAVGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRWDHWFSFLFQGLKCRRALHASFEVDVLFEVSSAFSLELYSAAMHLDSRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVTLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 467
BLAST of mRNA_P-littoralis_Contig861.5.1 vs. uniprot
Match: A0A6H5K344_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K344_9PHAE) HSP 1 Score: 233 bits (595), Expect = 1.380e-70 Identity = 133/296 (44.93%), Postives = 159/296 (53.72%), Query Frame = 1
Query: 1 LFVVFELSREPGRQMLNIFDNSTGHAAYGPDALTAQNVAAGAGGQQAVPRPFVHEGRRISTVFEEGSVLLFDTNPTPKKA-----------------------KEGDGSECYVVVGKG--------------------------------------------GEDTEPDRQGEGDT-------------------RRCCLRFVLSNLPAFKEQKNRVEEIFEAAGHRCIFLQKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATG 630
+F FE+SREPGRQML +FDNSTGH AY PDAL AQN+ A GG+Q PR F + GR I T F EG VL F ++P +K K G SE + V KG GE + +GEGD+ RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++K+IERRVCDYSV SLL RLP TLS++SLSL RKWAR+SWLY+ AY+ G
Sbjct: 221 IFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTEAEAVAKKRHGKRLGVFPIGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHG 516
BLAST of mRNA_P-littoralis_Contig861.5.1 vs. uniprot
Match: A0A6H5K8V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8V9_9PHAE) HSP 1 Score: 198 bits (503), Expect = 4.110e-58 Identity = 111/237 (46.84%), Postives = 134/237 (56.54%), Query Frame = 1
Query: 1 LFVVFELSREPGRQMLNIFDNSTGHAAYGPDALTAQNVAAGAGGQQAVPRPFVHEGRRISTVFEEGSVLLFDTNPTPKKAKEGDGSECYVVVGKGGEDTEPDRQGEGDTRRCCLRFVLSNLPAFKEQKNRVEEIFEAAGHRCIFLQKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHRSSTDRVDAVL 711
+F FE+SREPGRQML +FDNSTGH AY PDAL AQN+ A GG+Q PR F + GR I T F EG VL F ++P +K TE + G T R + F +R WG++K+IERRVCDYSV SLL RLP TLS++SLSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT+HRS TD D VL
Sbjct: 162 IFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARK-------------------TEAEAVG---TTRSSMLF---------------------------------------QRFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 337
BLAST of mRNA_P-littoralis_Contig861.5.1 vs. uniprot
Match: A0A6H5KGB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGB3_9PHAE) HSP 1 Score: 180 bits (456), Expect = 1.950e-50 Identity = 110/262 (41.98%), Postives = 131/262 (50.00%), Query Frame = 1
Query: 1 LFVVFELSREPGRQMLNIFDNSTGHAAYGPDALTAQNVAAGAGGQQAVPRPFVHEGRRISTVFEEGSVLLFDTNPTPKKAKE-----------------------GDGSECYVVVGKG--------------GEDTEP---------------------DRQGE---------------------------GDTRRCCLRFVLSNLPAFKEQKNRVEEIFEAAGHRCIFLQKYHPECNAIERVWGHSKAIERRVCDYSVKSL 531
+F FELSREPGRQML +FDNSTGH A+ PDAL AQN+A AGG+Q P F + GR I T F+ G L F T P +K +E G SE V + KG GE P ++ GE G +RRCC R ++S + AF+EQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++KAIERRVCDYSV+SL
Sbjct: 199 IFAAFELSREPGRQMLMVFDNSTGHNAFSPDALRAQNIALSAGGEQVPPHSFEYNGRTIYTTFQLGDKLRFKTAPFARKTEEEKTAKKRNGKKLGVFPIGTVIRQGTPSEKLVGIAKGMKEILEDMELYKLDGESKPPKLECQRCLDEAKAKRDKSKMYNKGGESRQQALADNEDSDXXXXXXXXXXXXTDGTSRRCCCRRIISEVKAFQEQMNRVEELFEAAGHVCIFLAKYHPELNAIERFWGYTKAIERRVCDYSVQSL 460
BLAST of mRNA_P-littoralis_Contig861.5.1 vs. uniprot
Match: A0A6H5L669_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L669_9PHAE) HSP 1 Score: 181 bits (459), Expect = 5.170e-49 Identity = 114/342 (33.33%), Postives = 157/342 (45.91%), Query Frame = 1
Query: 1 LFVVFELSREPGRQMLNIFDNSTGHAAYGPDALTAQNVAAGAGGQQAVPRPFVH-EGRRISTVFEEGSVLLFDTN-------------------------PTPKKAKEGD--------------------------GSECYVVVG-------------------------------KGGEDTEP--DRQGEGDT--------------------RRCCLRFVLSNLPAFKEQKNRVEEIFEAAGHRCIFLQKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHRSSTDRVDAVL 711
L + EL+ EP RQ++ +FDNSTGH+A+G AL ++VA GG Q R F EG + T F G L F TN P K K G G + + +G +GGE + D G+G+ RRCC+ VLS L AF+E+ N VE++F+A GH C+FL KYHPE N+IER WG+ K + R C+YS++ +L+ LP LS + IR W+R++WLY+EAY GL+ Y++YRDLK+W HR +T R DAV+
Sbjct: 382 LIAIHELTSEPHRQLVMVFDNSTGHSAFGAGALVGEHVALRPGGAQGALRNFEDDEGNPVHTTFRVGDKLRFTTNVFAPKTEEELEAEKKAAEEAEEKGLPVKKSKKNGKNLGKFKKDDEVKATGPTAVLIGLPKGGKQLLMEMGLWEGEPTLRVHECSACRAEKAATRQAITAFNRGGEGRQQVVDNTGQGEEDGGEDXXXXXXXXXXXXXKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCMFLPKYHPELNSIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGDAVI 723
BLAST of mRNA_P-littoralis_Contig861.5.1 vs. uniprot
Match: A0A6H5JJ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ42_9PHAE) HSP 1 Score: 181 bits (460), Expect = 9.540e-49 Identity = 117/344 (34.01%), Postives = 156/344 (45.35%), Query Frame = 1
Query: 1 LFVVFELSREPGRQMLNIFDNSTGHAAYGPDALTAQNVAAGAGGQQAVPRPFVH-EGRRISTVFEEGSVLLFDT--------------------NPTPKKAKEGDGS----------------------------------------------ECYVVVG-------------KGGE-------------DTEPDRQGE--------------GDTRRCCLRFVLSNLPAFKEQKNRVEEIFEAAGHRCIFLQKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHRSSTDRVDAVL 711
L + EL+ EP R ++ +FDNSTGHAAY AL A ++ G GG QA+ F+ EG + T F G LLF NP KK + GD EC G +GGE +T+ + G G RCC+ V + L AFK + N++E++F+ AGH CIFL KYHPE NAIER WG+ K + R C+YS+K +LK LP LS + L +R W+R++WLY+EAY GL Y++ RDLKKW SHRS T+R D+V+
Sbjct: 956 LIAIHELTSEPHRPLVMVFDNSTGHAAYETSALVASHINKGPGGGQAILDDFLDDEGNLVRTTFRAGDKLLFKAQVYAAKTPEQLKAEEEELKRNPKYKKPRNGDNLGEFAAGTEIRASGRTSRLIGQAKGGQQMLMEMGLWDVPGEDPVRVLECKACKGERAATRAAITSFNRGGEGRQQALDDAARRDETDGESAGSPGEGAAGGAAGNHVGTRSRCCIGRVFAELKAFKMELNKIEKMFKKAGHICIFLAKYHPELNAIERYWGYVKHLLRLHCEYSLKHMLKILPGALSGVPLRFMRGWSRVTWLYLEAYDEGLVDYLEVRDLKKWLSHRSPTERGDSVV 1299
BLAST of mRNA_P-littoralis_Contig861.5.1 vs. uniprot
Match: A0A6H5JR66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR66_9PHAE) HSP 1 Score: 164 bits (416), Expect = 8.180e-46 Identity = 87/185 (47.03%), Postives = 113/185 (61.08%), Query Frame = 1
Query: 169 RRISTVFE---EGSVLLFDTNPTPKKAKEGDGSECYVVVGKGGEDTEPDRQGE-GDTRRCCLRFVLSNLPAFKEQKNRVEEIFEAAGHRCIFLQKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHRSSTDRVDAVL 711
R+ T F EG + D K E DG E VG G GE G RRCC+ VLS L AF+E+ N VE++F+A GH CIFL KYHPE NAIER WG+ K + R C+YS++ +L+ LP LS + IR W+R++WLY+EAY GL+ Y++YRDLK+W HR +T R DAV+
Sbjct: 125 RQAITAFNRGVEGRQQVVDN----KGQGEEDGGEDGASVGSGA-------AGEAGKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKYLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGDAVI 298
BLAST of mRNA_P-littoralis_Contig861.5.1 vs. uniprot
Match: A0A6H5KKI5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKI5_9PHAE) HSP 1 Score: 157 bits (398), Expect = 1.310e-44 Identity = 85/200 (42.50%), Postives = 114/200 (57.00%), Query Frame = 1
Query: 145 PRPFVHEGR--RISTVFEEGSVLLFDTNPTPKKAKEGDGSECYV-VVGKGGEDTEPDRQGEGD--------TRRCCLRFVLSNLPAFKEQKNRVEEIFEAAGHRCIFLQKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHRSSTDRVDAVL 711
P P VHE R R ++ F+ G+G + V G+G ED D G RRCC+ VLS L AF+E+ N VE +F+A GH CIFL KYHPE NAIER WG+ K + R C+YS++ +L+ LP LS + IR W+R++WLY+EAY GL+ Y++ DLK+W HR +T R DAV+
Sbjct: 10 PTPRVHECRACRAEKAATRQAITAFNRG--------GEGRQHVVDSTGQGKEDGGEDGDSSGSGAAGEAGKRRRCCVVRVLSELKAFREELNMVENLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLECCDLKEWGKHREATARGDAVI 201 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig861.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig861.5.1 >prot_P-littoralis_Contig861.5.1 ID=prot_P-littoralis_Contig861.5.1|Name=mRNA_P-littoralis_Contig861.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=237bp LFVVFELSREPGRQMLNIFDNSTGHAAYGPDALTAQNVAAGAGGQQAVPRback to top mRNA from alignment at P-littoralis_Contig861:56980..58424- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig861.5.1 ID=mRNA_P-littoralis_Contig861.5.1|Name=mRNA_P-littoralis_Contig861.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1445bp|location=Sequence derived from alignment at P-littoralis_Contig861:56980..58424- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig861:56980..58424- >mRNA_P-littoralis_Contig861.5.1 ID=mRNA_P-littoralis_Contig861.5.1|Name=mRNA_P-littoralis_Contig861.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=711bp|location=Sequence derived from alignment at P-littoralis_Contig861:56980..58424- (Pylaiella littoralis U1_48)back to top |