prot_P-littoralis_Contig86.111.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig86.111.1
Unique Nameprot_P-littoralis_Contig86.111.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length892
Homology
BLAST of mRNA_P-littoralis_Contig86.111.1 vs. uniprot
Match: D8LTI9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTI9_ECTSI)

HSP 1 Score: 438 bits (1126), Expect = 8.910e-137
Identity = 459/929 (49.41%), Postives = 521/929 (56.08%), Query Frame = 0
Query:   10 SLRSSGRASQRFSEVLSQGPTAIPAKEDVDAAISSVLAADGLASRRRPLDQQHNSSGPQLHTTSGAKRSTTSISGGKNLNRPPDGVGGGVGAFGSNPGVXXXXXXXXXXXXXAVVD-------------------------------GGXGVGGLLDWALWPVWGTIDALKWAGGTVNEVAVAPVIRMASPWGLAGSMLTTVKAFTPQRARDLARVAGNFGLNAAGLIRTPAGGEVLRSSGRAAGSLSMAVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEHMAGIGRRAAAKTANA-DAADADLGSITGDECAASTADGGIGHHLGRGPGGGVENDVVSVGTPDDNSPESLAAAAGEEKEELKTMEALVHEARLERARQERGSSGGRGGSVEKLGIAGRGKTRSSASLRDLGVGTDSHGTDDDRNPNREGRGARACFD---------VLPIVRQADLNGDALLSTFSRIDTTAVAGGTTHVISPATLPSLGTATYGGSMTGTSRSAPSSPRARHPCSAAATTAAAGSILSVASGSLS-PVVPSRGRASTVTGCCD-GVQTVDSTSGDINAEARSSFTADGGGGM------GGESDG--SVFSSTRP-AVEYERDGRAKLPRFTSDHIASVLRGQTLGLEQQLEAPNEDSLDDTVARA--SRISLQCKAVLTPRVGAALDGGFSAMQEKESGTMEASSGEEEGHSVPVSQSAVTKAGGSWKQLVFACLLLLFAGDGLRHRWKSLFHGERAPARRPPSRPSPPSTAASRQASFGAETASNVGGDGGGPGHKHVFGTAFLPPTCQDPASGRTMAVWATPSGPCLSPVLT----ADNTESM-GGPGGPGCASSFRLCSITEVDVRDAGDV 879
            SLRSSGR+SQRFSEVLS GPTAIPA+ED+DAAISS LA D L        +Q +S+G Q+   S ++     I G  +  RPP       G       V         XXXX V +                                 X   GLLDWALWP+WGTIDALKWAGGTVNEVAVAPVIRMASPWGLAGS+LTTVKAFTPQRARDLARV GNFGLNAAGL++TPAG E+LRSSGRA GSLS AV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  MEHMAGI RRAAAK A A   ADAD G   GD  A      G   +L      G+ +DVV     +  +      AAG E+    T++ LV EAR ERA +E   SGG GG       AG  +  S  S+  +G     +       P+R G G  +  D         V P++RQADL GD  L TF  +D    AGGT  V+ P                 TSRSAPSSP   H  +A                +L      +R RASTVTG  D GV+            A  ++   GG G       GGE+DG  SV S  RP AVEYERDG A+LPRFTS+H  SVLRGQ LGLE QLEAPNEDS+DDTVARA  SR+ L+     +PRV A    G +A+QE    T    +   EG  V V  +A  +   SWKQ  FACLLL FAGDGLR+RWK+ F GE+       S P PP T    +  + A             G   VFG  FLPP C+DP SG TMAVW  PSGPCLSP       A  TE + GG G P C++SFRLCS  EV  R    V
Sbjct:    6 SLRSSGRSSQRFSEVLSHGPTAIPAREDMDAAISSALAVDDLG-----FGRQAHSNGEQVEQPSDSRSQPRRIDGANS--RPPY-----TGPTAGPARVPNAANAATTXXXXXVQNRXXXXXXXXXXXXXHPRANXXXXXXXXXXXXXXXXXXGLLDWALWPLWGTIDALKWAGGTVNEVAVAPVIRMASPWGLAGSVLTTVKAFTPQRARDLARVVGNFGLNAAGLVQTPAGVELLRSSGRATGSLSTAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEATILAAEFTVNVEHALEMEHMAGIARRAAAKAAAAAXTADADPGLAAGDAHAPRAGGDGTEPNL------GLADDVVGPAAREPEANGGPVCAAGGEQ----TLDDLVREARAERAHRE---SGGTGGPRS----AGHERGGSDGSVLAVGGPEGCY-------PSRSGEGRPSGNDPTDADHRAGVTPVIRQADLAGDTPLRTF--LD---AAGGTAPVVRP--------------PGDTSRSAPSSPGGWHAHAAXXXXXXXXXXXXXXXXTLGGQCAGNRERASTVTGAGDDGVR---------GGTAEEAYGISGGAGFTAGCRGGGENDGTESVLSGARPPAVEYERDGNARLPRFTSEHFESVLRGQPLGLELQLEAPNEDSVDDTVARAASSRVPLEGAPPPSPRVDAGNAPG-NAVQE----TTGQDAPPREGKGVSVPSTAEAR---SWKQAGFACLLLFFAGDGLRYRWKAGFRGEKT-VHENISMPPPPPTPGPPKPGYLATD-----------GRNSVFGVTFLPPACKDPVSGATMAVWVAPSGPCLSPASVSGGGAGRTEGLLGGGGEPACSASFRLCSAAEVGARGGTKV 850          
BLAST of mRNA_P-littoralis_Contig86.111.1 vs. uniprot
Match: A0A835ZC84_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC84_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.760e-17
Identity = 80/208 (38.46%), Postives = 98/208 (47.12%), Query Frame = 0
Query:   21 FSEVLSQGPTAIPAKEDVDAAISSVLAADGLASRRRPLDQQHNSSGPQLHTTSGAKRSTTSISGGKNLNRPPDGVGGGVGAFGSNPGVXXXXXXXXXXXXXAVVDGGXGVGGLLDWALWPVWGTIDALKWAGGTVNEVAVAPVIRMASPWGLAGSMLTTVKAFTPQRARDLARVAGNFGLNAAGLIRTPAGGEVLRSSGRAAGSLSMA 228
            F+EVL+ GPTA P   D+ AA++S LA D +     P       +G       G   S    S  +N      G       F S                           G+L WAL P+W TIDALKWAG TV + AVAPV+R ASP G A  +   VK  TPQRA DLAR+ GN   NA GL+ TP+G +V     RAA S + A
Sbjct:   29 FTEVLALGPTATPDSNDISAALAS-LAPDAV---EPPPFHSPRQAGADAAVAVGDTASDGEASSSRNTGDDHAGD-----PFRS---------------------------GVLGWALSPMWMTIDALKWAGQTVTDKAVAPVVRYASPAGWAAYIFDAVKNLTPQRACDLARIFGNATFNAVGLLHTPSGRQVTACL-RAAASFTRA 199          
BLAST of mRNA_P-littoralis_Contig86.111.1 vs. uniprot
Match: A0A836CDX8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDX8_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 6.890e-14
Identity = 47/90 (52.22%), Postives = 59/90 (65.56%), Query Frame = 0
Query:  141 VWGTIDALKWAGGTVNEVAVAPVIRMASPWGLAGSMLTTVKAFTPQRARDLARVAGNFGLNAAGLIRTPAGGEVLRSSGRAAGSLSMAVS 230
            +W  +DALKWAG TVNE AVAPV R+ASP G A  +   VK  TPQRARDLAR+ GN  +   GL  TPAG +V+ +  +A  + +  VS
Sbjct:    1 MWFGLDALKWAGQTVNERAVAPVARLASPAGWASYIFEGVKNLTPQRARDLARIFGNATIRGVGLTTTPAGQKVVAAGLQAVDAFATTVS 90          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig86.111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LTI9_ECTSI8.910e-13749.41Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZC84_9STRA1.760e-1738.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CDX8_9STRA6.890e-1452.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 395..415
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 394..422
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 455..470
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 699..727
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 381..470
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 765..809
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig86contigP-littoralis_Contig86:385726..393015 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig86.111.1mRNA_P-littoralis_Contig86.111.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig86 385478..393487 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig86.111.1 ID=prot_P-littoralis_Contig86.111.1|Name=mRNA_P-littoralis_Contig86.111.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=892bp
MERRATSSGSLRSSGRASQRFSEVLSQGPTAIPAKEDVDAAISSVLAADG
LASRRRPLDQQHNSSGPQLHTTSGAKRSTTSISGGKNLNRPPDGVGGGVG
AFGSNPGVGVGGVGVGGGGGGAVVDGGGGVGGLLDWALWPVWGTIDALKW
AGGTVNEVAVAPVIRMASPWGLAGSMLTTVKAFTPQRARDLARVAGNFGL
NAAGLIRTPAGGEVLRSSGRAAGSLSMAVSSPAGRQFLLESATGLVKLAE
ALDTPEVKSFVQQGAVVAARGMDALASRQTKILVKDLADVVVRLLELANS
REATTMAAEFTVNVEHALEMEHMAGIGRRAAAKTANADAADADLGSITGD
ECAASTADGGIGHHLGRGPGGGVENDVVSVGTPDDNSPESLAAAAGEEKE
ELKTMEALVHEARLERARQERGSSGGRGGSVEKLGIAGRGKTRSSASLRD
LGVGTDSHGTDDDRNPNREGRGARACFDVLPIVRQADLNGDALLSTFSRI
DTTAVAGGTTHVISPATLPSLGTATYGGSMTGTSRSAPSSPRARHPCSAA
ATTAAAGSILSVASGSLSPVVPSRGRASTVTGCCDGVQTVDSTSGDINAE
ARSSFTADGGGGMGGESDGSVFSSTRPAVEYERDGRAKLPRFTSDHIASV
LRGQTLGLEQQLEAPNEDSLDDTVARASRISLQCKAVLTPRVGAALDGGF
SAMQEKESGTMEASSGEEEGHSVPVSQSAVTKAGGSWKQLVFACLLLLFA
GDGLRHRWKSLFHGERAPARRPPSRPSPPSTAASRQASFGAETASNVGGD
GGGPGHKHVFGTAFLPPTCQDPASGRTMAVWATPSGPCLSPVLTADNTES
MGGPGGPGCASSFRLCSITEVDVRDAGDVKHHGRPQRGEEL*
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