mRNA_P-littoralis_Contig86.100.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig86.100.2 vs. uniprot
Match: D8LTJ2_ECTSI (Rab7L, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTJ2_ECTSI) HSP 1 Score: 456 bits (1174), Expect = 4.910e-157 Identity = 273/371 (73.58%), Postives = 289/371 (77.90%), Query Frame = 2
Query: 125 MIFDPALAAAARRHQRAKTKAEKSSVSGDSPNTSAESSVNXXXXXXXXXXXXXXXXPSAAAAKAPRA-NVDGTQAVGASPETSEHNGSGVVKALGVGEKAESSSSSVGDVVIGTVSGAG--TLSRTASASSNGVDFDGVTARVRAAGGASRQRPMKPRVLLKIVVLGCSNVGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVDGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAQSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLAKGMPMDGVQGVNQTRVIKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALEQKRKRERDLALHPSLGGGTTLDLADERARQQRKGGCC 1228
MIFDPALAAAARRHQRA+ K KS G P + A++ XXXXXXXXXXXXXXX K P + K L GEKA L TAS++SNGVDF+G TAR RA GGASRQR MKPRVLLKIVVLGCSNVGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVV+GDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACA SFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLA G+ MDG+ GV++TRV+KWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALEQKRKRERDLAL+PSLGGGTTLDLAD+RARQQR GGCC
Sbjct: 1 MIFDPALAAAARRHQRAQNKVNKSPTPGGLPTSPADNXXXXXXXXXXXXXXXXXX-------KVPLPIDXXXXXXXXXXXXXXXXXXXXXXKDLVTGEKARXXXXXXXXXXXXXXXXXXXXALGGTASSNSNGVDFEGATARARAGGGASRQRQMKPRVLLKIVVLGCSNVGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLATGLAMDGIHGVDKTRVMKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALEQKRKRERDLALNPSLGGGTTLDLADQRARQQRTGGCC 364
BLAST of mRNA_P-littoralis_Contig86.100.2 vs. uniprot
Match: A0A7S2RVV0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RVV0_9STRA) HSP 1 Score: 234 bits (596), Expect = 5.470e-71 Identity = 116/217 (53.46%), Postives = 154/217 (70.97%), Query Frame = 2
Query: 578 MKPRVLLKIVVLGCSNVGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVDGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAQSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLAKGMPMDGVQGVNQTRVIKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALEQKRKRERDLALHPSLGGGT-TLDLADERARQQRKGGC 1225
M+ RV+LKI+VLG SNVGKTSLM+R+ F++ RR T GADF +K + Q ++LQIWDTAGQERFH G+LG F+RGA+AALLVYD A SF+QV WR E+L R+DV P DFP+VV+GNKVD+ PMDG+ GV++ V +WC G GHIETSAKDGTGV+VAM+A+ LAL +++ + +A SL G +++L+ + + GC
Sbjct: 1 MEERVVLKIIVLGSSNVGKTSLMRRFCKNSFSEARRATTGADFSSKRMSFAGQEVMLQIWDTAGQERFHHGTLGGAFYRGADAALLVYDATSASSFKQVENWRSEVLSRIDVAPGDFPLVVVGNKVDMEGNTPMDGIHGVDKAAVTEWCRAHGTGHIETSAKDGTGVQVAMEAIGTLALARRKAGVQRIARMNSLTGAKDSVNLSTSFRKGETSSGC 217
BLAST of mRNA_P-littoralis_Contig86.100.2 vs. uniprot
Match: F0Y7J9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7J9_AURAN) HSP 1 Score: 198 bits (503), Expect = 5.970e-58 Identity = 103/181 (56.91%), Postives = 130/181 (71.82%), Query Frame = 2
Query: 593 LLKIVVLGCSNVGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVDGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAQSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLAKGMPMDGVQGVNQTRVIKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALEQKRKRE 1135
LLK VVLG SNVGKTSL+ ++ G FT RR T GADF +K + GD+ + L IWDTAGQERFH G+LG F+RGA+AALLVYD ++FEQ+ MWR ELL R+D P +FP+VV+GNKVD+ + + Q V++WC G+G TSAKDGTGV VAM+AVA+LALE KR+R+
Sbjct: 10 LLKCVVLGSSNVGKTSLLMQFVHGKFTPARRVTTGADFASKVLHLGDREVRLVIWDTAGQERFHHGTLGGAFYRGADAALLVYDTTDIRTFEQIEMWRRELLQRIDGPPEEFPVVVVGNKVDVP-----NKTREHEQAAVVRWCRDLGIGLCLTSAKDGTGVAVAMEAVAMLALENKRRRQ 185
BLAST of mRNA_P-littoralis_Contig86.100.2 vs. uniprot
Match: A0A7S3K3U1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3U1_9STRA) HSP 1 Score: 178 bits (452), Expect = 2.830e-50 Identity = 104/217 (47.93%), Postives = 135/217 (62.21%), Query Frame = 2
Query: 593 LLKIVVLGCSNVGKTSLMKRYAAGDFTDYRRPTIGADFMTKEV-VDGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAQSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLAKGMPMDGVQGVNQTRVIKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALEQKRKRERDLALHPSLGGGTTLDL----ADERARQQRKGGCC 1228
LLK VVLG SNVGKTSL+ ++ G F RR T GADF ++ + +D + + L IWDTAGQERFH G+LG+ F+RGA+ ALLVYD +SFEQ+ MWR ELL R+ P +FP+VV+GNK+D+ P + + V KWC G+G TSAKDGTGV AM+A+A LA E K++R + + H SL TL L + R CC
Sbjct: 11 LLKCVVLGSSNVGKTSLLTQFIHGRFDSTRRATTGADFASRVLEIDQGRKIRLVIWDTAGQERFHHGTLGNAFYRGADGALLVYDTTDIRSFEQIEMWRGELLQRVQGPPDEFPVVVVGNKIDI----PSE-TRDSEFAAVQKWCRDLGIGICLTSAKDGTGVLAAMEAIAHLAYEAKQRRGK--SSHSSLNDRDTLALDNIRRNNRGAVDSSSSCC 220
BLAST of mRNA_P-littoralis_Contig86.100.2 vs. uniprot
Match: A0A8J2S8J0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S8J0_9STRA) HSP 1 Score: 178 bits (452), Expect = 9.000e-50 Identity = 102/213 (47.89%), Postives = 132/213 (61.97%), Query Frame = 2
Query: 593 LLKIVVLGCSNVGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVDGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAQSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLAKGMPMDGVQGVNQTRVIKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALEQKRKRERDLALHPSLGGGTTLDLADERARQQR-KGGCC 1228
+LK VVLG SNVGK+SL++RY F RR T+GADF +K + G++ + L IWDTAGQERFH G++G F+RGA+ ALLVYD +F QV +WR ELL R+D P FPIV +GNK+DL D ++ WC G+G + SA DGTGV VAM+AVA LALE K++R+ P +L L D AR++R CC
Sbjct: 59 MLKCVVLGSSNVGKSSLLERYTKNSFRPERRVTLGADFASKVIEVGEERVRLVIWDTAGQERFHHGTIGGAFYRGADGALLVYDTTDFATFAQVELWRRELLQRVD-GPEAFPIVCVGNKMDLPCPTRSD-----DEKAAEAWCAAHGVGLLFASACDGTGVAVAMEAVAALALENKKRRQALGVTKPP-----SLSLDDLHAREKRGSSNCC 260
BLAST of mRNA_P-littoralis_Contig86.100.2 vs. uniprot
Match: A0A482SWX8_9ARCH (GTP-binding protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SWX8_9ARCH) HSP 1 Score: 176 bits (445), Expect = 1.670e-49 Identity = 99/196 (50.51%), Postives = 130/196 (66.33%), Query Frame = 2
Query: 638 SLMKRYAAGDFTDYRRPTIGADFMTKEVVDGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAQSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLAKGMPMDGVQGVNQTRVIKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALEQKRKRERDLALHPSLGGGTTLDLADERARQQRKGGC 1225
S R+A G F+ RRPT+G+DF TK++V D + LQIWDTAGQERF+ GS+GS FFRGA+ ALLVYDV +S EQ+A WREE L R D + FP+VVIGNK+D+ + +P++ + V+ + V+ WC GHIETSAKDG GVE AM A+ LALE R R+R + GG ++L E + +K GC
Sbjct: 9 SSFDRFATGRFSGLRRPTVGSDFQTKKMVVHDVEVTLQIWDTAGQERFNQGSIGSAFFRGAHGALLVYDVNDEKSIEQIAQWREECLSRQLEDEY-FPMVVIGNKIDVREKIPVE--RRVDVSGVLTWCREHSYGHIETSAKDGHGVEAAMLAITGLALENMRNRQRRNV--NAAMGGEKVNL--ESKYEVKKSGC 197
BLAST of mRNA_P-littoralis_Contig86.100.2 vs. uniprot
Match: A0A2G5FAI3_AQUCA (Uncharacterized protein n=2 Tax=Ranunculaceae TaxID=3440 RepID=A0A2G5FAI3_AQUCA) HSP 1 Score: 172 bits (437), Expect = 4.860e-47 Identity = 100/215 (46.51%), Postives = 135/215 (62.79%), Query Frame = 2
Query: 587 RVLLKIVVLGCSNVGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVDGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAQSFEQVAMWREELLVRLDV-DPHDFPIVVIGNKVDLAKGMPMDGVQGVNQTRVIKWCEMQG-MGHIETSAKDGTGVEVAMQAVAVLALEQKRKRERDLALHPSLGGGTTLDLADERARQQRKGGC 1225
R+LLK+++LG S VGKTSLM +Y F++ + TIGADF+TKEV D+ LQIWDTAGQERF SLG F+RGA+ +LVYDV A+SFE + WREE L++ DP +FP VV+GNK+D+ G + V++ + WC +G + + ETSAK+G VE A Q +A AL+ + + E L T+D+AD RQQR GC
Sbjct: 101 RMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQ--SLGVAFYRGADCCVLVYDVNVAKSFENLNNWREEFLIQASPSDPENFPFVVLGNKIDVDGG----NSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFQCIAKNALKNEPEEEMYLP--------DTIDVADGGGRQQRSTGC 301
BLAST of mRNA_P-littoralis_Contig86.100.2 vs. uniprot
Match: A0A0C2XM57_AMAMK (Uncharacterized protein n=4 Tax=Agaricales TaxID=5338 RepID=A0A0C2XM57_AMAMK) HSP 1 Score: 169 bits (427), Expect = 8.710e-47 Identity = 89/185 (48.11%), Postives = 126/185 (68.11%), Query Frame = 2
Query: 587 RVLLKIVVLGCSNVGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVDGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAQSFEQVAMWREELLVRLDV-DPHDFPIVVIGNKVDLAKGMPMDGVQGVNQTRVIKWCEMQG-MGHIETSAKDGTGVEVAMQAVAVLALEQKRKRE 1135
RVLLK+++LG S VGKTSLM +Y F++ + TIGADF+TKEV+ D+P+ +Q+WDTAGQERF SLG F+RGA+ +LVYDV ++SFE + WR+E L++ DP +FP VV+GNK+D+ + + V Q R + WC+ +G + + ETSAKD VE A Q VA AL+Q+ + +
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVIVDDRPVTMQLWDTAGQERFQ--SLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDPENFPFVVLGNKIDVEENK-----RQVTQKRAMTWCQSKGNIPYFETSAKDAINVEQAFQTVAKNALQQEAEEQ 180
BLAST of mRNA_P-littoralis_Contig86.100.2 vs. uniprot
Match: A0A7S3H9L0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9L0_9STRA) HSP 1 Score: 169 bits (427), Expect = 9.540e-47 Identity = 100/220 (45.45%), Postives = 138/220 (62.73%), Query Frame = 2
Query: 581 KPRVLLKIVVLGCSNVGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVDGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAQSFEQVAMWREELLVRLDV-DPHDFPIVVIGNKVDLAKGMPMDGVQGVNQTRVIKWCEMQG---MGHIETSAKDGTGVEVAMQAVAVLALEQKRKRERDLALHPSLGGGTTLDLADERARQQRKGGCC 1228
+ +VLLKI++LG S VGKTSLM +Y F+ + TIGADF+TKEV+ D+ + LQIWDTAGQERF SLG F+RGA+A +LV+D+ +SFEQ+ WREE L + + DP +F VVIGNKVD + + V +++V +WC+ QG + + ETSAKD T VEVA A AL Q + D+ + T++L+ + A + GGCC
Sbjct: 4 RKKVLLKIIILGDSGVGKTSLMNQYVNQRFSSQYKATIGADFLTKEVMIDDKLVTLQIWDTAGQERFQ--SLGVAFYRGADACILVHDITAEKSFEQLNSWREEFLAQANPRDPDNFSFVVIGNKVD------KESERRVPKSKVTQWCKSQGPKPIPYFETSAKDATKVEVAFLEAAQAALHQD-SADSDVFIPD------TINLSKQTAPAKSSGGCC 208
BLAST of mRNA_P-littoralis_Contig86.100.2 vs. uniprot
Match: Q38JI9_SOLTU (GTP-binding protein n=63 Tax=Pentapetalae TaxID=1437201 RepID=Q38JI9_SOLTU) HSP 1 Score: 168 bits (426), Expect = 1.260e-46 Identity = 101/219 (46.12%), Postives = 135/219 (61.64%), Query Frame = 2
Query: 575 PMKPRVLLKIVVLGCSNVGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVDGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAQSFEQVAMWREELLVRLDV-DPHDFPIVVIGNKVDLAKGMPMDGVQGVNQTRVIKWCEMQG-MGHIETSAKDGTGVEVAMQAVAVLALEQKRKRERDLALHPSLGGGTTLDLADERARQQRKGGC 1225
P + R LLK+++LG S VGKTSLM +Y F++ + TIGADF+TKEV D+ LQIWDTAGQERF SLG F+RGA+ +LVYDV +SFE + WREE L++ DP +FP VV+GNKVD+ G + V++ + WC +G + + ETSAK+GT VE A Q +A AL+ + E L T+D+A + QQR GGC
Sbjct: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQ--SLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPFVVLGNKVDVDGG----NSRVVSEKKARAWCASKGNIPYFETSAKEGTNVEEAFQCIAKNALKSGEEEEIYLP--------DTIDVA--ASSQQRTGGC 204 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig86.100.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig86.100.2 >prot_P-littoralis_Contig86.100.2 ID=prot_P-littoralis_Contig86.100.2|Name=mRNA_P-littoralis_Contig86.100.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=369bp MIFDPALAAAARRHQRAKTKAEKSSVSGDSPNTSAESSVNNKNSSSTSKRback to top mRNA from alignment at P-littoralis_Contig86:339249..349308- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig86.100.2 ID=mRNA_P-littoralis_Contig86.100.2|Name=mRNA_P-littoralis_Contig86.100.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=10060bp|location=Sequence derived from alignment at P-littoralis_Contig86:339249..349308- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig86:339249..349308- >mRNA_P-littoralis_Contig86.100.2 ID=mRNA_P-littoralis_Contig86.100.2|Name=mRNA_P-littoralis_Contig86.100.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1107bp|location=Sequence derived from alignment at P-littoralis_Contig86:339249..349308- (Pylaiella littoralis U1_48)back to top |