prot_P-littoralis_Contig86.80.6 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig86.80.6
Unique Nameprot_P-littoralis_Contig86.80.6
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length546
Homology
BLAST of mRNA_P-littoralis_Contig86.80.6 vs. uniprot
Match: A0A6H5KYC8_9PHAE (RNase III domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYC8_9PHAE)

HSP 1 Score: 529 bits (1362), Expect = 3.180e-181
Identity = 332/530 (62.64%), Postives = 357/530 (67.36%), Query Frame = 0
Query:    4 AATDEDV-LRNSLPAVEHALGYRFRDRRLLLTALTHRSFCNETDTASGDFDELEWLGDAVLQLAVSSWLFRSAKGSRRKSGQLSTTRQRFVSAGACESFARQLNLVRRSETPRLHSTSNTARPIVFLVTQQQLPFLRIGNAQPVQGTKILADCFEAVLGAVYVDAGGCSDLEPIHAILARAIPSYEHGNRSQEQHQRWHRXXXXXXXQFQQSHLPGAQGALEPPK-PRAEEPRKLMNLAHRLAQMAKRGAEGTQSGGAR---PLQGSS--SSLVSHPAEGSQRNSHEVLREFDERLRGFQHNVLQGGALSFGSRAFAQAFGEDVARFFSAAATGDPERCALLDSVLAGSSNLRKHFGDAPPGSERVVMAVVPVPSEVRLQTFTVVEYLLAVVFQQGGGSAEQASDNPVLRLIRSASHGETTITCLSNIVTETGTCLLLNTRHRAVISGNQALSRDSVP---PP------------DPSSSLLLPAPRPPHAASGGERPHPGFPSQPDHLCLPGRKRSPPPRGVVVPWGGA 511
            AA DE V L++SLP VEHALGYRF DRRLLLTALTHRSFCNET TASGDFDELEWLGD+VLQLAVSSWLFRSAKGSRR SGQLS TRQRFV + ACESFARQLNL                           LP+LRIG+ QPV GTKILADCFEAVLGAVYVDAGGCSDLEPIHAILAR IPSY+H  R Q   Q  H        +   SH     GA+EPP  P AE PRKLMNLAHRL Q+AKR A+  + GG R   P+QG +  S  +S  A GS R+  EV+REFD RLR FQ NVL+GGALSF SRAFA AFGED ARFFSA ATG PERCALLDSVL GSS LRKHF  APPG+ERVVM VV VPSE+RLQTFTVVE+LL  V Q  GGS E A DNPVLRLIRSA HG+ TI  LS+IVTET T LLLN   RA IS   AL+    P   PP                  L P   P      G  PH G PS  +H  LP RKRS P RG   PWG A
Sbjct:    2 AARDESVFLQHSLPVVEHALGYRFGDRRLLLTALTHRSFCNETHTASGDFDELEWLGDSVLQLAVSSWLFRSAKGSRRSSGQLSATRQRFVDSHACESFARQLNL---------------------------LPYLRIGHGQPVGGTKILADCFEAVLGAVYVDAGGCSDLEPIHAILARVIPSYKHDRRLQVPRQPPH-------PRHPHSH---PHGAMEPPPGPPAEGPRKLMNLAHRLTQIAKRDADRVEGGGGRAAQPMQGDAPASPPLSRAANGSDRDPLEVVREFDGRLRDFQGNVLRGGALSFSSRAFAGAFGEDEARFFSAVATGCPERCALLDSVLDGSSMLRKHFDGAPPGAERVVMEVVLVPSELRLQTFTVVEFLLNNVLQPQGGSGEPA-DNPVLRLIRSAPHGDATIAFLSSIVTETATNLLLNAHQRATISAGVALAPLPAPLYGPPVXXXXXXXXXXXXXXXXXLSPPHLPGPGGGRGPPPHLGLPSLQNHFSLPRRKRSHPHRGGG-PWGSA 492          
BLAST of mRNA_P-littoralis_Contig86.80.6 vs. uniprot
Match: A0A835Z0E4_9STRA (RNase III domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0E4_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.140e-26
Identity = 81/193 (41.97%), Postives = 106/193 (54.92%), Query Frame = 0
Query:    2 AAAATDEDV--LRNSLPAVEHALGYRFRDRRLLLTALTHRSFCNETDTASGDFDELEWLGDAVLQLAVSSWLFRSAKGSRRKSGQLSTTRQRFVSAGACESFARQLNLVRRSETPRLHSTSNTARPIVFLVTQQQLPFLRIGNAQPVQGT--KILADCFEAVLGAVYVDAGGCSD---LEPIHAILARAIPSY 187
            A A  DEDV  L+  +PA E AL Y F ++ LLL ALTHRS+CNE  TA+GD D LEWLGD+VLQ A+S WL+ S   + R   +L+  RQ+FV   AC  +A +L L                              +R G+ Q  +GT  K+ ADCFEAVLGA+Y+D+   S      PI  +LA  IP++
Sbjct:  377 AQAQQDEDVKALQQLVPAAEAALRYTFSNKLLLLQALTHRSYCNENRTATGDNDALEWLGDSVLQHAISDWLYNSF--AERSVHKLTDLRQQFVDTTACADYASRLGLP---------------------------DMMRTGHGQATRGTNTKVSADCFEAVLGAMYLDSRSMSPDAPFVPIFRVLADVIPAF 540          
BLAST of mRNA_P-littoralis_Contig86.80.6 vs. uniprot
Match: A0A835ZIJ8_9STRA (RNase III domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIJ8_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.070e-23
Identity = 72/188 (38.30%), Postives = 102/188 (54.26%), Query Frame = 0
Query:    3 AAATDEDVLRNSLPAVEHALGYRFRDRRLLLTALTHRSFCNETDTASGDFDELEWLGDAVLQLAVSSWLFRSAKGSRRKSGQLSTTRQRFVSAGACESFARQLNLVRRSETPRLHSTSNTARPIVFLVTQQQLPFLRIGNAQPVQGTKILADCFEAVLGAVYVD---AGGCSDLEPIHAILARAIPSY 187
            A + DE+ L++ +PA E ALGY F D+ LLL ALT +S+ NE ++A+GD   +EWLGD VLQ AVS WL+ S   + R+ G+++  R+ +V   AC  +A+ L L R   T    S S T+R                         K+ AD FEAVLGAV++D   A   +   P+  ILA+ I  +
Sbjct:   52 APSADEEGLQSLVPAAEEALGYEFLDQMLLLQALTLKSYVNEVESATGDNGAMEWLGDCVLQHAVSDWLYTSTAATHRQEGRMTERRKAYVDTTACARYAQCLGLPRLLRTGAGASASLTSR-------------------------KVQADAFEAVLGAVHLDCRDAAAAAVPSPVVRILAKVIRGF 214          
BLAST of mRNA_P-littoralis_Contig86.80.6 vs. uniprot
Match: A0A1F6LC67_9BACT (Ribonuclease 3 n=1 Tax=Candidatus Lindowbacteria bacterium RIFCSPLOWO2_12_FULL_62_27 TaxID=1817870 RepID=A0A1F6LC67_9BACT)

HSP 1 Score: 94.4 bits (233), Expect = 2.500e-18
Identity = 62/156 (39.74%), Postives = 82/156 (52.56%), Query Frame = 0
Query:   13 NSLPAVEHALGYRFRDRRLLLTALTHRSFCNETDTASGDFDELEWLGDAVLQLAVSSWLFRSAKGSRRKSGQLSTTRQRFVSAGACESFARQLNLVRRSETPRLHSTSNTARPIVFLVTQQQLPFLRIGNAQPVQGTKILADCFEAVLGAVYVDAG 168
            + L A+E  LG+RF    LLLTALTHRS+    D A GD++ LE+LGDAVL + VS  LFR        +G L+    + VS  ACE  AR++ L R                            +R+G A  ++GT IL++  EAVLGAVY+D G
Sbjct:    2 SDLAALEDILGHRFSKPDLLLTALTHRSY-RSVDAACGDYERLEFLGDAVLGMVVSQKLFRDLD---LPAGDLTKRTSQVVSRSACEGVARRMGLDRH---------------------------VRVGPAATIEGTSILSNVIEAVLGAVYLDGG 126          
BLAST of mRNA_P-littoralis_Contig86.80.6 vs. uniprot
Match: A0A2E3LVF3_9BACT (Ribonuclease 3 n=1 Tax=Waddliaceae bacterium TaxID=2026802 RepID=A0A2E3LVF3_9BACT)

HSP 1 Score: 88.2 bits (217), Expect = 4.920e-16
Identity = 57/156 (36.54%), Postives = 79/156 (50.64%), Query Frame = 0
Query:   18 VEHALGYRFRDRRLLLTALTHRSFCNE-TDTASGDFDELEWLGDAVLQLAVSSWLFRSAKGSRRKSGQLSTTRQRFVSAGACESFARQLNLVRRSETPRLHSTSNTARPIVFLVTQQQLPFLRIGNAQPVQ----GTKILADCFEAVLGAVYVDAG 168
            +EH + Y F D+ LL  AL HRSF NE  D+  G  + LE+LGD+VL L +S +L++S     R  G LST R R V A AC S+ R LN+                             F+ +G  + +      T ILA+ FE+V+GA+Y+D G
Sbjct:   14 LEHRISYTFSDKNLLARALVHRSFANEHQDSVPGHNERLEFLGDSVLGLIISEYLYQSFP--ERPEGDLSTLRSRLVEASACLSYLRSLNIEH---------------------------FILLGRGEKMNVSRGRTSILANLFESVIGAIYLDGG 140          
BLAST of mRNA_P-littoralis_Contig86.80.6 vs. uniprot
Match: A0A4Y6Q0Q1_9DELT (Ribonuclease 3 n=1 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6Q0Q1_9DELT)

HSP 1 Score: 87.0 bits (214), Expect = 1.430e-15
Identity = 61/175 (34.86%), Postives = 85/175 (48.57%), Query Frame = 0
Query:   14 SLPAVEHALGYRFRDRRLLLTALTHRSFCNETDTASGDFDELEWLGDAVLQLAVSSWLFRSAKGSRRKSGQLSTTRQRFVSAGACESFARQLNLVRRSETPRLHSTSNTARPIVFLVTQQQLPFLRIGNAQPVQG----TKILADCFEAVLGAVYVDAGGCSDLEPIHAILARAI 184
            +L  +E  LGYRF DR +L  ALTHRSF NE +  +GD   LE+LGDAVL L V++ LF   +    + G LST + + V        AR+L L R                           FLR+G  +   G    + +LAD +EA+L A+Y+D G  +  E +   L  A+
Sbjct:   19 ALEELEEKLGYRFEDRTVLERALTHRSFANEVEQNAGDNQRLEFLGDAVLGLIVANELFH--RDREVQEGALSTRQAQMVCEPTLADLARELELGR---------------------------FLRLGRGESTSGGRDKSSLLADAYEALLAAIYLDGGLDAAQEVVIGHLGEAL 164          
BLAST of mRNA_P-littoralis_Contig86.80.6 vs. uniprot
Match: UPI001A9A005C (ribonuclease III n=1 Tax=Comamonas denitrificans TaxID=117506 RepID=UPI001A9A005C)

HSP 1 Score: 85.1 bits (209), Expect = 4.390e-15
Identity = 63/176 (35.80%), Postives = 86/176 (48.86%), Query Frame = 0
Query:   11 LRNSLPAVEHALGYRFRDRRLLLTALTHRSFCNETDTASGDFDELEWLGDAVLQLAVSSWLFRSAKGSRRKSGQLSTTRQRFVSAGACESFARQLNLVRRSETPRLHSTSNTARPIVFLVTQQQLPFLRIGNAQPVQGTK----ILADCFEAVLGAVYVDAGGCSDLEPIHAILAR 182
            + + L A++  LGYRF+D RLL  ALTHRSF ++ +      + LE+LGD+VL LA+SSWL+     S    G LS  R   V  G+    A  L L      P L                     LR+G  +   G K    ILAD  EA+LGAVY++AG     + +H + A+
Sbjct:    1 MHDDLAALQQRLGYRFQDTRLLQRALTHRSFSSDHN------ERLEFLGDSVLGLAISSWLYHKLADSPE--GDLSRARANLVKEGSLYQLALGLGL------PEL---------------------LRLGEGEARSGGKRRPSILADAVEAILGAVYLEAGFPVAEQVVHQLFAK 141          
BLAST of mRNA_P-littoralis_Contig86.80.6 vs. uniprot
Match: UPI0004903D1B (ribonuclease III n=1 Tax=Desulfocurvus vexinensis TaxID=399548 RepID=UPI0004903D1B)

HSP 1 Score: 85.1 bits (209), Expect = 5.330e-15
Identity = 59/180 (32.78%), Postives = 87/180 (48.33%), Query Frame = 0
Query:   11 LRNSLPAVEHALGYRFRDRRLLLTALTHRSFCNETDTASGDFDELEWLGDAVLQLAVSSWLFRSAKGSRRKSGQLSTTRQRFVSAGACESFARQLNLVRRSETPRLHSTSNTARPIVFLVTQQQLPFLRIGNAQPVQGTK----ILADCFEAVLGAVYVDAGGCSDLEPIHAILARAIPS 186
            +  +L  ++  + +RF   + L TALTH SF NE + A  D + LE+LGDAVL+L VS  L+   +      G+L+  R R VS  A  + AR+L L                              LR+G  + +QG +    +LAD FEAVLGAV++D G  +    +  I A  +P+
Sbjct:    1 MTQNLDTLQKVISHRFSQVKHLETALTHSSFANEHEEAQQDNERLEFLGDAVLELGVSEMLYE--RSPEAPEGELTRMRARLVSEPALAALARELGLDE---------------------------LLRLGRGEEMQGGRTRDALLADAFEAVLGAVFLDGGYEAARAAVRGIYASRLPA 151          
BLAST of mRNA_P-littoralis_Contig86.80.6 vs. uniprot
Match: A0A090DV22_9BACT (Ribonuclease 3 n=1 Tax=Criblamydia sequanensis CRIB-18 TaxID=1437425 RepID=A0A090DV22_9BACT)

HSP 1 Score: 84.3 bits (207), Expect = 9.800e-15
Identity = 55/167 (32.93%), Postives = 79/167 (47.31%), Query Frame = 0
Query:    6 TDEDVLRNSLPAVEHALGYRFRDRRLLLTALTHRSFCNETDTASGDFDELEWLGDAVLQLAVSSWLFRSAKGSRRKSGQLSTTRQRFVSAGACESFARQLNLVRRSETPRLHSTSNTARPIVFLVTQQQLPFLRIGNAQPVQGTK----ILADCFEAVLGAVYVDAG 168
            T  ++L+  +P +E  L Y F+D  LL  A  HRS+ NE    S   + LE+LGDAVL L VS  LFR+        G+LS  R R V A +C  + ++L +                            P+L +G  +     K    ILAD FEA++GA+++D G
Sbjct:    2 TPHEILKTKIPDIERKLEYHFKDPDLLFLAFVHRSYVNEFKQVSEHNERLEFLGDAVLGLIVSEHLFRNFPNIPE--GKLSALRSRLVEASSCMEYVKKLAMN---------------------------PYLLLGKGERTNDGKGRESILADLFEAIIGAIFLDGG 139          
BLAST of mRNA_P-littoralis_Contig86.80.6 vs. uniprot
Match: A0A0S8DBK7_9BACT (Ribonuclease 3 n=1 Tax=Chlamydiae bacterium SM23_39 TaxID=1704235 RepID=A0A0S8DBK7_9BACT)

HSP 1 Score: 84.0 bits (206), Expect = 1.180e-14
Identity = 55/163 (33.74%), Postives = 85/163 (52.15%), Query Frame = 0
Query:    7 DEDVLRNSLPAVEHALGYRFRDRRLLLTALTHRSFCNETDTASGDFDELEWLGDAVLQLAVSSWLFRSAKGSRRKSGQLSTTRQRFVSAGACESFARQLNLVRRSETPRLHSTSNTARPIVFLVTQQQLPFLRIGNAQPVQGTK-ILADCFEAVLGAVYVDAG 168
            D ++L+ +LP++E  L Y F+D+ LL  +  H SF NE      D + LE+LGD+VL L VSS+L++       K G L+  R R V A +C  + ++L++                    FL+  +       G  +  +G K ILAD FEA++GA+Y+D G
Sbjct:    3 DFEILKKNLPSIEKKLNYIFKDKNLLFLSFMHPSFANENKYFKKDNERLEFLGDSVLNLIVSSYLYKMFS---EKEGILTFFRSRLVDADSCAFYIKELDIDG------------------FLLVGK-------GEQEDNRGKKSILADFFEAIIGAIYLDGG 137          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig86.80.6 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYC8_9PHAE3.180e-18162.64RNase III domain-containing protein n=2 Tax=Ectoca... [more]
A0A835Z0E4_9STRA1.140e-2641.97RNase III domain-containing protein n=1 Tax=Tribon... [more]
A0A835ZIJ8_9STRA1.070e-2338.30RNase III domain-containing protein n=1 Tax=Tribon... [more]
A0A1F6LC67_9BACT2.500e-1839.74Ribonuclease 3 n=1 Tax=Candidatus Lindowbacteria b... [more]
A0A2E3LVF3_9BACT4.920e-1636.54Ribonuclease 3 n=1 Tax=Waddliaceae bacterium TaxID... [more]
A0A4Y6Q0Q1_9DELT1.430e-1534.86Ribonuclease 3 n=1 Tax=Persicimonas caeni TaxID=22... [more]
UPI001A9A005C4.390e-1535.80ribonuclease III n=1 Tax=Comamonas denitrificans T... [more]
UPI0004903D1B5.330e-1532.78ribonuclease III n=1 Tax=Desulfocurvus vexinensis ... [more]
A0A090DV22_9BACT9.800e-1532.93Ribonuclease 3 n=1 Tax=Criblamydia sequanensis CRI... [more]
A0A0S8DBK7_9BACT1.180e-1433.74Ribonuclease 3 n=1 Tax=Chlamydiae bacterium SM23_3... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000999Ribonuclease III domainSMARTSM00535riboneu5coord: 30..192
e-value: 1.3E-25
score: 101.1
IPR000999Ribonuclease III domainPFAMPF14622Ribonucleas_3_3coord: 28..169
e-value: 8.7E-17
score: 61.5
IPR000999Ribonuclease III domainPROSITEPS50142RNASE_3_2coord: 15..168
score: 24.451221
IPR000999Ribonuclease III domainCDDcd00593RIBOccoord: 30..168
e-value: 1.75565E-24
score: 96.913
IPR036389Ribonuclease III, endonuclease domain superfamilyGENE3D1.10.1520.10Ribonuclease III domaincoord: 3..187
e-value: 1.9E-31
score: 111.1
IPR036389Ribonuclease III, endonuclease domain superfamilySUPERFAMILY69065RNase III domain-likecoord: 15..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 446..545
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..278
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 189..285
NoneNo IPR availablePANTHERPTHR14950DICER-RELATEDcoord: 14..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig86contigP-littoralis_Contig86:259606..264603 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig86.80.6mRNA_P-littoralis_Contig86.80.6Pylaiella littoralis U1_48mRNAP-littoralis_Contig86 259606..264603 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig86.80.6 ID=prot_P-littoralis_Contig86.80.6|Name=mRNA_P-littoralis_Contig86.80.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=546bp
MAAAATDEDVLRNSLPAVEHALGYRFRDRRLLLTALTHRSFCNETDTASG
DFDELEWLGDAVLQLAVSSWLFRSAKGSRRKSGQLSTTRQRFVSAGACES
FARQLNLVRRSETPRLHSTSNTARPIVFLVTQQQLPFLRIGNAQPVQGTK
ILADCFEAVLGAVYVDAGGCSDLEPIHAILARAIPSYEHGNRSQEQHQRW
HRHHLHHQQQFQQSHLPGAQGALEPPKPRAEEPRKLMNLAHRLAQMAKRG
AEGTQSGGARPLQGSSSSLVSHPAEGSQRNSHEVLREFDERLRGFQHNVL
QGGALSFGSRAFAQAFGEDVARFFSAAATGDPERCALLDSVLAGSSNLRK
HFGDAPPGSERVVMAVVPVPSEVRLQTFTVVEYLLAVVFQQGGGSAEQAS
DNPVLRLIRSASHGETTITCLSNIVTETGTCLLLNTRHRAVISGNQALSR
DSVPPPDPSSSLLLPAPRPPHAASGGERPHPGFPSQPDHLCLPGRKRSPP
PRGVVVPWGGAGQRGRGGGWGRGGGGGGGRGMRGGRGGGRLRDSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000999RNase_III_dom
IPR036389RNase_III_sf