prot_P-littoralis_Contig86.73.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig86.73.1
Unique Name	prot_P-littoralis_Contig86.73.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	1084

Homology

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BLAST of mRNA_P-littoralis_Contig86.73.1 vs. uniprot
Match: D8LTD2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD2_ECTSI)

HSP 1 Score: 704 bits (1818), Expect = 6.220e-239
Identity = 446/781 (57.11%), Postives = 508/781 (65.04%), Query Frame = 0

Query:  293 MTGHVKVWDVAALVAPXXXXXXXXXXXXXXXXXXXXXXX----KKKRFGDAPSATRPLPGYGRHSGIAALWGIALSMARATSLSFSPDDNATFALACWDGKVSLFLPTTTAEATASPPDASLSEPGQNTVRESR------------------GGGDNHIESRRVWKQVWREEAAATPGKTRGGKGGGSLEDQDGAFLCWCKGSPGSAAPAADLAVSTYRVTTGDCARRHRREESFRDNPIAASGGQTAPTPTTTTHELPRRESSPPAFPPDVAMGPGFEVFAEKGLGERVGGAVSGPRPAGMTPEPTAERYLIHGLAAGPSFVALYDSDFCLQVVSIAAILSAGRVLASPPLPSPPTPCSTAAVEAIFTADDTVTTSPG-SADVGASTSL--STKVTLVNNDHGLIAACVMRHRGPEGGGVVDILPAEDGLQLLVTWRNAISRVETPDNGECTGRAAGEDARLLSFLPSQLENNAGGGAGDDGNGGVFGADIRWGRFALFTRYTVLVYTRPDQGKTAGKTQRAEGGNVPAVSPLGGWGAHMDYPVVHGVLLGGRSTATPHSQRLPKPPVDLTDIYLLTVSGTVHPDSGGGQLLSIRSLGDRSVTFRCPLKSSDAXXXXXXXAARVVASNQGAKVYVSPGYGGGVFVVAVEGGALECAEVWRGTFDEGQDRLEVGSSRVITSYPWPVPETLCLQGVAGPNCELFLFKEVGGSSPGSVAAAGSSEAARETVRWWMTWPEAEIWRWVDAPALLGDEDLGVSDLVNIFQLEVEEMLSSYATRPES 1048
            MTGHVKVWDVAALVA   XXXXXXXXXXXXXXXXXXXXX    K + F +A  A RP PG   HS +AALW +AL MAR TSLSFSP+D+ATFALACWDGK++LFLP   A+A   PP+ASL E   N                        G G   + S+R WKQVWRE  AA PGK  GGKG  +LEDQDG FLCWCK S  S     ++AVSTY  TTGD A+R   +    +         T P P     E P  E    A+PP  AMGPG EV AE+GLG R+GGAVS  R  G+T EPTAERYLIHGLAAGP FVALYDSD CL VVSIAA+LS   VL       PPTP     VEA+    D    SPG SAD  AST    +  VTLV+NDHGLIAACV RH GP  G      P + GL L +TWR+A S VETPD+GEC G+  GE+ R LSFLP +L  + GG  GDD  GGVF AD+RW R ALFTR TVLVYTRP + K   K      GN       GGW A+ +YP+VHGVLLGG STAT  S+ LP+ P DLTD++LL V G+    SG G +LSIRSL DRSVT RCPL SS          A  VA   G +VY SPGYGGGVFVVA EGG+ ECA +WRG+FDE   +L++GSSRVITSYPWP PE L LQGVAGPNCEL LFKEVG    GS A   S+     +VRWWMTWPE EIW+WVDAPALLG+EDLGVSD V IFQ+E+E+ +  +A  PE+
Sbjct:    1 MTGHVKVWDVAALVAAPTXXXXXXXXXXXXXXXXXXXXXXXXGKGRGFDEALHAMRPSPGQEGHSNLAALWSVALPMARVTSLSFSPNDSATFALACWDGKMALFLPAAPAQAAVLPPNASLCEASTNAATAGAPTSTXXXXXXXXXXXXDTGEG---VGSKRAWKQVWRE--AAAPGKVGGGKGRENLEDQDGTFLCWCKASDAS---TTNVAVSTYCTTTGDYAKRPCGDPDEDER----GSETTLPAPRNAAKEFPLPEPPREAYPP--AMGPGIEVLAERGLGGRIGGAVSASRRDGVTQEPTAERYLIHGLAAGPGFVALYDSDLCLHVVSIAAMLSDTCVL------PPPTP--KIEVEALSGHPDEA--SPGASADAEASTPPRPTRNVTLVDNDHGLIAACVRRHSGP--GSADAAAPPDGGLDLAITWRDASSGVETPDDGECVGQRTGENDRRLSFLPGELAGDYGG--GDDDEGGVFCADVRWQRLALFTRETVLVYTRPAREKAGRKGHGTPCGNALGA---GGWRAYAEYPIVHGVLLGGASTATSLSKSLPEAPEDLTDVHLLVVLGSNSQSSGDGPVLSIRSLRDRSVTCRCPLSSSS----DDVGEAGAVARQPGTRVYASPGYGGGVFVVAAEGGSGECARIWRGSFDEVSCQLKMGSSRVITSYPWPEPEMLRLQGVAGPNCELILFKEVGA---GSSAENRSNGDTSRSVRWWMTWPEPEIWKWVDAPALLGEEDLGVSDFVKIFQVEIEDAIRVHAQGPEA 743

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig86.73.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig86.73.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LTD2_ECTSI	6.220e-239	57.11	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 358..394 e-value: 190.0 score: 2.6 coord: 263..301 e-value: 0.0019 score: 27.5
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 276..302 score: 8.904377
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 206..418 e-value: 3.7E-9 score: 38.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1046..1060
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 401..422
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1041..1064
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 401..458
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 510..530
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 423..439
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 498..538
IPR011041	Soluble quinoprotein glucose/sorbosone dehydrogenase	SUPERFAMILY	50952	Soluble quinoprotein glucose dehydrogenase	coord: 262..922
IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily	SUPERFAMILY	50998	Quinoprotein alcohol dehydrogenase-like	coord: 72..396

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig86	contig	P-littoralis_Contig86:215868..221679 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig86.73.1	mRNA_P-littoralis_Contig86.73.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig86 215861..222713 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig86.73.1 ID=prot_P-littoralis_Contig86.73.1|Name=mRNA_P-littoralis_Contig86.73.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1084bp
MNQLSVGDPAASSLSSCLCAFPGGVSLLTETGLLRPFLVPETSNGEEGSA
ADPEVIVAAPLRLSEPSPEGTFPVGADVPVDHAWSQDGNILVVLRRSSYT
AYCRDSKAGAEAAEVTPHRLDDAVLSQHRQPTGEGIEGSTEPESSTRTPP
SRRDAPSLGLAEVHTENNGFEGKVVSCCLLGSCPREEAAAATKSTISSEE
SGQHSSNRGSGGRTYLIAVGGAFGVECYGLEFRQCSEEVGTEKRKQASLQ
DGGTGNPTASATTCRPLASIFEGYPVVALAFSRDSGLMAAASMTGHVKVW
DVAALVAPPSSQQSNNVLVKKESVARGRGGGKKKRFGDAPSATRPLPGYG
RHSGIAALWGIALSMARATSLSFSPDDNATFALACWDGKVSLFLPTTTAE
ATASPPDASLSEPGQNTVRESRGGGDNHIESRRVWKQVWREEAAATPGKT
RGGKGGGSLEDQDGAFLCWCKGSPGSAAPAADLAVSTYRVTTGDCARRHR
REESFRDNPIAASGGQTAPTPTTTTHELPRRESSPPAFPPDVAMGPGFEV
FAEKGLGERVGGAVSGPRPAGMTPEPTAERYLIHGLAAGPSFVALYDSDF
CLQVVSIAAILSAGRVLASPPLPSPPTPCSTAAVEAIFTADDTVTTSPGS
ADVGASTSLSTKVTLVNNDHGLIAACVMRHRGPEGGGVVDILPAEDGLQL
LVTWRNAISRVETPDNGECTGRAAGEDARLLSFLPSQLENNAGGGAGDDG
NGGVFGADIRWGRFALFTRYTVLVYTRPDQGKTAGKTQRAEGGNVPAVSP
LGGWGAHMDYPVVHGVLLGGRSTATPHSQRLPKPPVDLTDIYLLTVSGTV
HPDSGGGQLLSIRSLGDRSVTFRCPLKSSDADADADAEAARVVASNQGAK
VYVSPGYGGGVFVVAVEGGALECAEVWRGTFDEGQDRLEVGSSRVITSYP
WPVPETLCLQGVAGPNCELFLFKEVGGSSPGSVAAAGSSEAARETVRWWM
TWPEAEIWRWVDAPALLGDEDLGVSDLVNIFQLEVEEMLSSYATRPESDG
EPTSPQGDSAHTGAGGRGGVMVPFILDFTPLSG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR011041	Quinoprot_gluc/sorb_DH
IPR011047	Quinoprotein_ADH-like_supfam