mRNA_P-littoralis_Contig86.57.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig86.57.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 202 bits (513), Expect = 6.760e-52 Identity = 241/521 (46.26%), Postives = 286/521 (54.89%), Query Frame = 3
Query: 474 EGEDRTRLDGFEIELVKLVQREATSAQWKEWLRAPLEHAAAKGNMELVTRLIDAGADESAGWRGFHGRTLLGAAAHGKNEKMVLAFLEAGAADGVDVVFNGAKGESALHVAASQGAKAAAIPLIRGGENPNRQD--GKSXXXXXXXXXXXXXXXXXXXXXXXXXXXLKTQFTRYXXXXXXXXXXXXXXXXXXXXXXTDKDSQCSSDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SNDAGITPLHSAASF-EGPGDNGGAVRALLAAGADIEAKEAQYGFS-PLLSAAYCKFTSVGTIXXXXXXXXXXXAVDASGQTALHMLCRRSXXXXXXXXXXXXXXXXXXXXXXXXAKEVVGDWRDEDXXXXXXXXXXXSYASNNGDGSDAAKGQIHRMLARTPTDWAWHRRGWLLLCRSYPAKVQLAMDSSGVDS-------SAKVAKASCDGPGGDGDKSGKET-VDFANLVGRVVSLQGEDVLRLVLGFI 1994
E EDR+RL GFEIE+ KL++REAT QWKEWLRAPLEHAAA+GN++L TRL+DAGA+ AGWRG HGRTLLGAAA G++EKM+ L AGA D V+V+F G + ESALHVAA++GA L+ G +PN +D G+S XXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXX +ND G LH ASF E D G AVR LL AGAD+ K + PL A TS GTI A A T LH+ C R +VVG D + + +A +IHRMLAR P D +W RRGWL+L RS P +V +A SS S SAKVA+ S G D +++ + VD +LVGR+V L+ E + RLV+GF+
Sbjct: 7 EEEDRSRLVGFEIEIFKLLRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANTEAGWRGCHGRTLLGAAALGRSEKMIRTLLTAGATDDVNVLFGG-ESESALHVAAARGADDTCRALMIAGADPNVRDRVGRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANCGLRSMCTNGSRCSPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDL---------------DDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIANGSSSSSSISRINGNSAKVARVSGQGSSRDDEETEDQMMVDLRDLVGRLVGLEAEGLFRLVVGFL 511
BLAST of mRNA_P-littoralis_Contig86.57.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 195 bits (495), Expect = 2.950e-49 Identity = 271/558 (48.57%), Postives = 324/558 (58.06%), Query Frame = 3
Query: 474 EGEDRTRLDGFEIELVKLVQREATSAQWKEWLRAPLEHAAAKGNMELVTRLIDAGADESAGWRGFHGRTLLGAAAHGKNEKMVLAFLEAGAADGVDVVFNGAKGESALHVAASQGAKAAAIPLIRGGENPNRQDGKSXXXXXXXXXXXXXXXXXXXXXXXXXXXLKTQFTRYXXXXXXXXXXXXXXXXXXXXXXTDKDSQCSSDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNDAGITPLHSAASFEGPG-DNGGAVRALLAAGADIEAK--EAQYGFSPLLSAAYCKFTSVGTIXXXXXXXXXXXAVDASGQTALHMLCRRSXXXXXXXXXXXXXXXXXXXXXXXXAKEVVGDWRDEDXXXXXXXXXXXSYASNNGD-GSD----AAKGQ-IHRMLARTPTDWAWHRRGWLLLCRSYPAKVQLAMD----------SSGVDSSAKVAKASC-DGPGGDGDKSGKETVDFANLVGRVVSLQGEDVLRLVLGFI*GWKARVAHLATERKPAESGARLKLFVSCIL 2087
+ +DRTR+DGFE+E+ KLVQREATS QWKEWLRAPLEHAAA GN+ L TRL+DAGA AGWRG GRTLLGAAA KN+K++ A L AGA V+V+F GAK ESALH+AA++GA+ A+ L+ G NPN + XXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++ G T LH AA E G D G AVR LLAAGAD+ AK + +PL A + S GTI D +T LH C S A E++ W ++ +GD GSD A GQ IH+MLAR P D +W RR WL+L RS P +V++A + SS +S K+A+ S D GG+ + + VD LV R+V L+ + + RLV+GF+ + R L T +R L +L
Sbjct: 9 QSQDRTRVDGFEVEIFKLVQREATSKQWKEWLRAPLEHAAASGNLGLFTRLMDAGASAEAGWRGCDGRTLLGAAACSKNKKILRALLTAGAKSDVNVLF-GAKRESALHLAAARGAEEASKALMIAGANPNLRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIVKAFLDTDTSLVNATDHYGYTALHHAALIEVHGRDKGDAVRVLLAAGADVHAKTTDDHLRCAPLHIAVCGRVPSTGTIRALLEGGADVNVRDIEDRTPLHEACTYSSVA---------------------AVELLLRWGADEKLTDDGDVTPADMIGTSGDVGSDHGDIEADGQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANENRSGSSVGSSSSSNGNSTKLARFSGEDSGGGERETEDQMMVDLRGLVTRLVGLEADGLFRLVVGFL--KRGRNGVLFTSLPQLSDSSRQALATKLVL 542
BLAST of mRNA_P-littoralis_Contig86.57.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 186 bits (472), Expect = 1.350e-46 Identity = 262/512 (51.17%), Postives = 321/512 (62.70%), Query Frame = 3
Query: 480 EDRTRLDGFEIELVKLVQREATSAQWKEWLRAPLEHAAAKGNMELVTRLIDAGA-DESAGWRGFHGRTLLGAAAHGKNEKMVLAFLEAGAADGVDVVFNGAKGESALHVAASQGAKAAAIPLIRGGENPNRQDGKSXXXXXXXXXXXXXXXXXXXXXXXXXXXLKTQFTRYXXXXXXXXXXXXXXXXXXXXXXTDKDSQCSSDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNDAGITPLHSAASFEGPGDNGGAVRALLAAGADIEAKEAQ--YGFSPLLSAAYCKFTSVGTIXXXXXXXXXXXAVDASGQTALHMLCRRSXXXXXXXXXXXXXXXXXXXXXXXXAKEVVGDWRDEDXXXXXXXXXXXSYASNNGDGSDAAKGQIHRMLARTPTDWAWHRRGWLLLCRSYPAKVQLAMDSSGVDSS---AKVAKASCDGPGGDGDKSGKE-TVDFANLVGRVVSLQGEDVLRLVLGFI 1994
+ R+RLDGFEIE+ KLVQ E TS QWK+WL+ PLEHAAA+GN++L TRL+DAG GWRG +GRTLLGAAA GK++K+V A LEAGA D V+V+F G +G+SALHVAA++GA+ A+ L+ G +PN D K XXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +D G T +H A + GP DNG VR LL AG + A+ + ++PL A + S+ T A T LH+ C S +V+G + D N + A +I RMLAR P D +W RRGWL+L RS P +VQ+A S V+ + AKVA+ S + GGD +++ + TVD+ LVG ++ L+ + + RLV+GF+
Sbjct: 10 DGRSRLDGFEIEIFKLVQEEVTSEQWKQWLQVPLEHAAARGNLDLFTRLMDAGGFGGERGWRGCNGRTLLGAAAWGKSDKVVRALLEAGAGDDVNVLF-GPEGKSALHVAAARGAEEASKALMVAGADPNLFDCKGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDTGDDQGYTAIHCAVNRHGPLDNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDV---------------NDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIANKGSRVNRNSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFL 504
BLAST of mRNA_P-littoralis_Contig86.57.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE) HSP 1 Score: 180 bits (457), Expect = 6.920e-45 Identity = 173/521 (33.21%), Postives = 222/521 (42.61%), Query Frame = 3
Query: 474 EGEDRTRLDGFEIELVKLVQREATSAQWKEWLRAPLEHAAAKGNMELVTRLIDAGADESAGWRGFHGRTLLGAAAHGKNEKMVLAFLEAGAADGVDVVFNGAKGESALHVAASQGAKAAAIPLIRGGENPNRQDGKSXXXXXXXXXXXXXXXXXXXXXXXXXXXLKTQFTRYXXXXXXXXXXXXXXXXXXXXXXTDKDSQCSSDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNDAGITPLHSAASFEGP-GDNGGAVRALLAAGADIEAKEAQYGF-SPLLSAAYCKFTSVGTIXXXXXXXXXXXAVDASGQTALHMLCRRSXXXXXXXXXXXXXXXXXXXXXXXXAKEVVGDWRDEDXXXXXXXXXXXSYASNNGDGSDAAKGQIHRMLARTPTDWAWHRRGWLLLCRSYPAKVQLAMDSSGVD-----------SSAKVAKASCDGPGGDGDKSGKET-VDFANLVGRVVSLQGEDVLRLVLGFI 1994
E EDR+RLDGFEIE+ KLVQR ATS QWKEWLRAP EHAAA+GN++ TRL+DAGA+ AGWRG +GRTLLGAAA G++EKMV L AGA D V+V+F G + L+ G +PN +D + KT XXXXXXXXXX + C S+ ++ G LH AAS +GP DNG AVR LL AGAD+ AK + + L A + S GTI A QT LH+ C RS VV + +D +A +I RMLAR P +W RRGWL+L RS P +VQ+A SS +SAKVAK S + D +++ + VD +LVGR+++L+ + V RLV+GF+
Sbjct: 7 EEEDRSRLDGFEIEIFKLVQRGATSEQWKEWLRAPREHAAAEGNLDFFTRLMDAGANAGAGWRGCNGRTLLGAAAFGRSEKMVRTTLTAGATDDVNVLFGGER-----------------EALMIDGADPNVRDRRKRSPLHLAAVAGHHRVVGMLLLNRACVHAKTASQXXXXXXXXXXXX----------------ALCISE---LLLGANSHLEAVQELLAAGANYSLRTNGSRSPLEIAANRGQADVVKALLDKDSGEVDATDGGGWAALHYAASIDGPVRDNGDAVRVLLRAGADVSAKGTKDPCDTSLYLAVNRRIASDGTIRALLEGGANINARIGGDQTPLHVACSRSSAVGVELLLRWGADDKLTTNVGQTPAHVVRALQQDDLDDEEL---------------EADNQRIRRMLARDPAARSWRRRGWLVLSRSCPTRVQIANGSSXXXXXXXXXXXXNGNSAKVAKVSGESSSRDDEETADDMMVDLRDLVGRLIALEADGVFRLVVGFL 476
BLAST of mRNA_P-littoralis_Contig86.57.1 vs. uniprot
Match: D7G692_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G692_ECTSI) HSP 1 Score: 160 bits (405), Expect = 2.530e-37 Identity = 235/512 (45.90%), Postives = 283/512 (55.27%), Query Frame = 3
Query: 495 LDGFEIELVKLVQREATSAQWKEWLRAPLEHAAAKGNMELVTRLIDAGADESAGWRGFHGRTLLGAAAHGKNEKMVLAFL-EAGAADGVDVVFNGAKGESALHVAASQGAKAAAIPLIRGGENPNRQDGKSXXXXXXXXXXXXXXXXXXXXXXXXXXXLKTQFTRYXXXXXXXXXXXXXXXXXXXXXXTDKDSQCSS---DEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNDAGITPLHSAASFEGPG-DNGGAVRALLAAGADIEAKEAQYGFSPLLSAAYCKFTSVGTIXXXXXXXXXXXAVDASGQTALHMLCRRSXXXXXXXXXXXXXXXXXXXXXXXXAKEVVGDWRDEDXXXXXXXXXXXSYASNNGDGSD-----AAKGQIHRM-LARTPTDWAWHRRGWLLLCRSYPAKVQLAMDSSGVDS---SAKVAKASCDGPGGDGDKSGKET-VDFANLVGRVVSLQGEDVLRLVL 1985
LDG E+E+ KLV+ +ATS QW+EWLRAPLEHAAA+GN++L TRL+DAGAD SAGWRG HGRTLLGAAA+GKNE++V L E GA + V+V F G + ESALHVAA + + + L+ G +PN D KT XXXXXXXXXXXXX D+ C + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +++ T LH AA P + + ++PL Y + +S+ T XXXXXXXXXX A + T LH C +S A + VG W E SN DGS A GQ R+ LA P D W RRGWL+LCRSYP KVQ+ DSS S +AK A+ S + G GD+ G E ++ LVG +V LQ + V R+V+
Sbjct: 65 LDGLEVEIFKLVREQATSMQWREWLRAPLEHAAAEGNIDLFTRLMDAGADGSAGWRGCHGRTLLGAAAYGKNEEIVERLLAEDGATEDVNVCF-GDRLESALHVAAGRDDQHLSRVLLIAGADPNLLDDVGRSPLHVAAEKGHHRVLGFLLRKGRADANKTTXXXXXXXXXXXXXXXXXTSCVSKLLLYGADTDCGDRFENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWNDEDWATALHCAAQGSRPLLEXXXXXXXXXXXXXXXXXXXXECVWTPLHRGVYSRLSSLDTXXXXXXXXXXXNAQAENTWTPLHYACYKSNAAAVDLLLRWGADDTIVDGEGETAADEVGTWDPE-------------VHSNEDDGSIDDDKLKADGQRTRLILACAPVDRLWRRRGWLVLCRSYPTKVQILKDSSSSSSGCSTAKAARVSEEDSGECGDEDGDEARIELGRLVGHIVGLQADVVFRMVV 562
BLAST of mRNA_P-littoralis_Contig86.57.1 vs. uniprot
Match: D8LQE2_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE2_ECTSI) HSP 1 Score: 146 bits (369), Expect = 1.110e-36 Identity = 81/131 (61.83%), Postives = 99/131 (75.57%), Query Frame = 3
Query: 486 RTRLDGFEIELVKLVQREATSAQWKEWLRAPLEHAAAKGNMELVTRLIDAGADESAGWRGFHGRTLLGAAAHGKN-EKMVLAFLEAGAADGVDVVFNGAKGESALHVAASQGAKAAAIPLIRGGENPNRQD 875
R+RLDGFEIE+ KLV+ EA QWK+W RAPLEHA A+GN++L TRL+DAGAD AGWRG HGRTLLGAAA G N +KMV A LEAGA V+V F G ES LHV+A++GA+A+ L+ G +PN +D
Sbjct: 10 RSRLDGFEIEIFKLVKEEAAPEQWKQWFRAPLEHATARGNLDLFTRLMDAGADGEAGWRGCHGRTLLGAAACGNNSDKMVRALLEAGARRDVNVRF-GNTNESTLHVSAARGAEASCTALMIAGADPNLRD 139
BLAST of mRNA_P-littoralis_Contig86.57.1 vs. uniprot
Match: D8LQE9_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE9_ECTSI) HSP 1 Score: 144 bits (362), Expect = 5.470e-35 Identity = 82/138 (59.42%), Postives = 106/138 (76.81%), Query Frame = 3
Query: 462 MSVPEGEDRTRLDGFEIELVKLVQREATSAQWKEWLRAPLEHAAAKGNMELVTRLIDAGADESAGWRGF--HGRTLLGAAAHG-KNEKMVLAFLEAGAADGVDVVFNGAKGESALHVAASQGAKAAAIPLIRGGENPN 866
MS +G DR+R+DGFEIE+ KLV+ EAT+ QWK+WLR PLEHAAAKGN++L TRL+DAGA GWRG+ H RTLLGAAA G K++KM+ A LEAG D V+ VF G + ESALHV+A++GA+ A+ L+ G +P+
Sbjct: 1 MSASKG-DRSRVDGFEIEIFKLVKEEATAGQWKQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPGWRGWGCHERTLLGAAACGTKSDKMIWALLEAGVTDDVNAVF-GTERESALHVSAARGAEEASKALMAAGADPD 136
BLAST of mRNA_P-littoralis_Contig86.57.1 vs. uniprot
Match: A0A6H5KQY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY9_9PHAE) HSP 1 Score: 145 bits (367), Expect = 2.260e-34 Identity = 81/135 (60.00%), Postives = 100/135 (74.07%), Query Frame = 3
Query: 462 MSVPEGEDRTRLDGFEIELVKLVQREATSAQWKEWLRAPLEHAAAKGNMELVTRLIDAGADESAGWRGFHGRTLLGAAAHGKNEKMVLAFLEAGAADGVDVVFNGAKGESALHVAASQGAKAAAIPLIRGGENPN 866
MS + EDR+R+DGFE+++ KLVQ E T QWK+WL APL HAAAKG ++L TRLI+AGAD SAGWRG HGRTLLG AA +MV AFLEAGA D V+V F GA +SAL VAA++GA+ + L+ G +PN
Sbjct: 1 MSGSKREDRSRVDGFEMKIFKLVQAEETPEQWKKWLGAPLNHAAAKGKLDLFTRLINAGADGSAGWRGCHGRTLLGEAARSDGNQMVRAFLEAGATDDVNVRF-GAISQSALQVAAARGAEGSCSALMIAGADPN 134
BLAST of mRNA_P-littoralis_Contig86.57.1 vs. uniprot
Match: A0A6H5KWD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWD3_9PHAE) HSP 1 Score: 137 bits (344), Expect = 3.670e-33 Identity = 82/139 (58.99%), Postives = 97/139 (69.78%), Query Frame = 3
Query: 462 MSVPEGEDRTRLDGFEIELVKLVQREATSAQWKEWLRAPLEHAAAKGNMELVTRLIDAGADESAGWRGFHGRTLLGAAAHGKNEKMVLAFLEAGAADGVDVVFNGAKGESALHVAASQGAKAAAIPLIRGGENPNRQDG 878
MS +GEDR+RLDGFE+E KL EATS QW+E LRAPLEHAAA+GN +L RL+DAGAD AGWR GRTLL AAAHGKNE + L+AG + V+V F G + ESALHVA QGA + L+ G +PN DG
Sbjct: 1 MSASQGEDRSRLDGFELETFKL--DEATSDQWRERLRAPLEHAAAEGNTDLFMRLLDAGADGIAGWRDCGGRTLLDAAAHGKNEDIERTVLKAGVREDVNVCF-GERRESALHVAVVQGADNISGKLLIAGADPNLLDG 136
BLAST of mRNA_P-littoralis_Contig86.57.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE) HSP 1 Score: 150 bits (380), Expect = 6.920e-33 Identity = 171/512 (33.40%), Postives = 223/512 (43.55%), Query Frame = 3
Query: 480 EDRTRLDGFEIELVKLVQREATSAQWKEWLRAPLEHAAAKGNMELVTRLIDAGADESAGWRGFHGRTLLGAAAHGKNEKMVLAFLEAGAADGVDVVFNGAKGESALHVAASQGAKAAAIPLIRGGENPNRQDGKSXXXXXXXXXXXXXXXXXXXXXXXXXXXLKTQFTRYXXXXXXXXXXXXXXXXXXXXXXTDKDSQCSSDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNDAGITPLHSAASFEGPGDNGGAVRALLAAGADIEAKEAQYGF--SPLLSAAYCKFTSVGTIXXXXXXXXXXXAVDASGQTALHMLCRRSXXXXXXXXXXXXXXXXXXXXXXXXAKEVVGDWRDEDXXXXXXXXXXXSYASNNGDGSDAAKGQIHRMLARTPTDWAWHRRGWLLLCRSYPAKVQLAM---DSSGVDSSAKVAKASCDGPGGDGDKSGKETVDFANLVGRVVSLQGEDVLRLVLGFI*G 2000
EDR+ LDGFE+E+V+LV+ ATS QW++WLR PLEHAAAKGN++L TRL+DAG+ GWRG +GRTLLGA A+G++EKMV A LEAG +V F+ A+G+SALHVAA++ +PN K KT XXXXXXXXXXXXXXXXX D ++D T LH AA +G V LL AGAD+ AK Q F +PL A + +S+ TI XXXXXXXXX T LH+ C S +V+ DED +A + RMLAR P D +W R GWL+L RS P +VQ+ S S K+A+ S D + + VD+ L+ R+V L+ + + RL++GF+ G
Sbjct: 9 EDRSHLDGFEVEIVELVREGATSEQWRQWLRIPLEHAAAKGNLDLFTRLMDAGSSGEPGWRGCNGRTLLGATAYGESEKMVRALLEAGVTYDRNVRFS-AEGKSALHVAAAR--------------DPNLPACKGYHALHVAAERGHDRVISLLLLKGAHVDAKTYSGDAPLXXXXXXXXXXXXXXXXXLGGAHTD---------VAERHPTNSSGRWKCFWLPVPTGGRPDNGGWSSLPNAVCCGHATIVKAFLETGIDVDTTDDQAYTVLHRAADMDGC-----VVHVLLEAGADVNAKTDQNSFLYTPLHLAVDRRVSSIRTIRAXXXXXXXXXXXSEDNDTPLHVACTYSNAAVVKLLLCWGADGTCSNGNGHVPADVIRA-HDEDGLDDEHI--------------EADHKHVRRMLARAPADKSWRRHGWLVLSRSGPTRVQIGNRGGSGSSNSCSTKLARVSGKDSSRDDELENQMMVDWRVLLDRLVGLEADGLFRLMVGFLCG 476 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig86.57.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig86.57.1 >prot_P-littoralis_Contig86.57.1 ID=prot_P-littoralis_Contig86.57.1|Name=mRNA_P-littoralis_Contig86.57.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=512bp MSVPEGEDRTRLDGFEIELVKLVQREATSAQWKEWLRAPLEHAAAKGNMEback to top mRNA from alignment at P-littoralis_Contig86:146022..151694+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig86.57.1 ID=mRNA_P-littoralis_Contig86.57.1|Name=mRNA_P-littoralis_Contig86.57.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5673bp|location=Sequence derived from alignment at P-littoralis_Contig86:146022..151694+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig86:146022..151694+ >mRNA_P-littoralis_Contig86.57.1 ID=mRNA_P-littoralis_Contig86.57.1|Name=mRNA_P-littoralis_Contig86.57.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1536bp|location=Sequence derived from alignment at P-littoralis_Contig86:146022..151694+ (Pylaiella littoralis U1_48)back to top |