prot_P-littoralis_Contig86.48.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig86.48.2
Unique Name	prot_P-littoralis_Contig86.48.2
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	534

Homology

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BLAST of mRNA_P-littoralis_Contig86.48.2 vs. uniprot
Match: A0A6H5LDH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDH7_9PHAE)

HSP 1 Score: 810 bits (2092), Expect = 6.690e-292
Identity = 462/545 (84.77%), Postives = 482/545 (88.44%), Query Frame = 0

Query:    1 MVAMMIIKGFPSSLPEAEIKGLLETIGQVDVFQCAVDGDSLTCTCRYAADEDTAKAKKGFHDLEMGEMTLKVEIEEAAAGEAAETAGGTTNPD-NGSSVPAPXXXXXXXXXXXXXXXXXXXXXXRFAPPPTGAVGLQTGLA---GSAVGGLLGIPGLGGG--ASVGLPPASVYGASGVGLGGXXXXXXXXXXXXXA---APQTPQMKSQVEIFVGNIPVGTTQQGLVDFLNAAMLKVGLNLQPGNPVTSCRLNSKFAFCVMRNPDEAAKALNLNGIPYLGNVLKMQRPSSYSGPPDRAVTWQVLTGQAEMPADGMALMQNPTTKLSCEVFVGNIPPETQAPTLQEYLGGALVQVGLCKAPNPILSIRMNARFAFLEMRTAEDATAALNLDGIPFGGAALSVGRPKKYEGPVTPHKTWFDVLAECSFGLMGAAG---GAEAEPAPTSTVVRIGNVVTPEELSDDDAQKEVVEDMTEECSKYGTVAAIEIPHVGGAGAGVGFVFVKFHTREDAQKAKKGFGSRTFDGKSVDATYFPEEQFAAKAFAS 533
            MVAMM IKGFPSSLPEAEIKGLLETIGQVD+F+C+VDGDSLTCTCRY+ D+DTAKAKKGFHDLEMGEMTLKV++EEAA G    ++ G    D +G   PA       XXXXXXXXXXXXXXXXRFAPPPTGAV LQ GL    G+A  GLLGIPGLGGG     GLPPASV+ A       XXXXXXXXXXXXX    A  TPQMKSQ+EIFVGNIPVGTTQQGLVDFLNAAMLKVGLNLQPGNPVTSCRLNSKFAFCVMRNP+EAAKALNLNGIPYLGNVLKMQRPSSY+GPPDRAVTWQVLTGQAEMPA+GM LMQN  TKLSCEVFVGNIPPETQAPTLQEYLGGALVQVGLCK PNPILSIRMNARFAFLEMRTAEDATAALNLDGIPFGGAALSVGRPKKYEGPVTPHKTWFDVLAECSFGL+G AG     EAEPAPTSTVVRIGNVVTPEEL+DD+AQKEVVEDMTEECSKYG VA IEIPHVGGAGAGVGFVFVKFHT EDAQKAKKGFGSRTFDGKSVDATYFPEEQFAAK+FAS
Sbjct:    1 MVAMMTIKGFPSSLPEAEIKGLLETIGQVDMFRCSVDGDSLTCTCRYSTDDDTAKAKKGFHDLEMGEMTLKVDVEEAAPGTTDTSSAGNAGGDGSGDKAPA-EGSSVEXXXXXXXXXXXXXXXXRFAPPPTGAVDLQAGLGATPGAAGAGLLGIPGLGGGXLGLGGLPPASVHAAXXXXXXXXXXXXXXXXXXXXXXXPAAMTPQMKSQIEIFVGNIPVGTTQQGLVDFLNAAMLKVGLNLQPGNPVTSCRLNSKFAFCVMRNPEEAAKALNLNGIPYLGNVLKMQRPSSYTGPPDRAVTWQVLTGQAEMPAEGMMLMQNSATKLSCEVFVGNIPPETQAPTLQEYLGGALVQVGLCKPPNPILSIRMNARFAFLEMRTAEDATAALNLDGIPFGGAALSVGRPKKYEGPVTPHKTWFDVLAECSFGLVGGAGQGGATEAEPAPTSTVVRIGNVVTPEELTDDEAQKEVVEDMTEECSKYGAVAGIEIPHVGGAGAGVGFVFVKFHTLEDAQKAKKGFGSRTFDGKSVDATYFPEEQFAAKSFAS 544

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BLAST of mRNA_P-littoralis_Contig86.48.2 vs. uniprot
Match: D8LTD8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTD8_ECTSI)

HSP 1 Score: 450 bits (1157), Expect = 2.360e-154
Identity = 227/244 (93.03%), Postives = 232/244 (95.08%), Query Frame = 0

Query:  293 QVLTGQAEMPADGMALMQNPTTKLSCEVFVGNIPPETQAPTLQEYLGGALVQVGLCKAPNPILSIRMNARFAFLEMRTAEDATAALNLDGIPFGGAALSVGRPKKYEGPVTPHKTWFDVLAECSFGLMGAAG---GAEAEPAPTSTVVRIGNVVTPEELSDDDAQKEVVEDMTEECSKYGTVAAIEIPHVGGAGAGVGFVFVKFHTREDAQKAKKGFGSRTFDGKSVDATYFPEEQFAAKAFAS 533
            QVLTGQAEMPA+GM LMQN  TKLSCEVFVGNIPPETQAPTLQEYLGGALVQVGLCK PNPILSIRMNARFAFLEMRTAE+ATAALNLDGIPFGGAALSVGRPKKYEGPVTPHKTWFDVLAECSFGLMG AG    AEAEPAPTSTVVRIGNVVTPEEL+DD+AQKEVVEDMTEECSKYG VA IEIPHVGGAGAGVGFVFVKFHT EDAQKAKKGFGSRTFDGKSVDATYFPEEQFAAK+FAS
Sbjct:   16 QVLTGQAEMPAEGMMLMQNSATKLSCEVFVGNIPPETQAPTLQEYLGGALVQVGLCKPPNPILSIRMNARFAFLEMRTAEEATAALNLDGIPFGGAALSVGRPKKYEGPVTPHKTWFDVLAECSFGLMGGAGQGGAAEAEPAPTSTVVRIGNVVTPEELTDDEAQKEVVEDMTEECSKYGAVAGIEIPHVGGAGAGVGFVFVKFHTLEDAQKAKKGFGSRTFDGKSVDATYFPEEQFAAKSFAS 259

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BLAST of mRNA_P-littoralis_Contig86.48.2 vs. uniprot
Match: D8LTD9_ECTSI (RNA-binding region-containing protein (RNP-1) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTD9_ECTSI)

HSP 1 Score: 327 bits (839), Expect = 4.050e-95
Identity = 218/301 (72.43%), Postives = 234/301 (77.74%), Query Frame = 0

Query:    8 KGFPSSLPEAEIKGLLETIGQVDVFQCAVDGDSLTCTCRYAADEDTAKAKKGFHDLEMGEMTLKVEIEEAAAGEAAETAGGTTNPD-NGSSVPAPXXXXXXXXXXXXXXXXXXXXXXRFAPPPTGAVGLQTGLA---GSAVGGLLGIPGLGGGASVGLPPASVYGASGVGLGGXXXXXXXXXXXXXAAP--QTPQMKSQVEIFVGNIPVGTTQQGLVDFLNAAMLKVGLNLQPGNPVTSCRLNSKFAFCVMRNPDEAAKALNLNGIPYLGNVLKMQRPSSYSGPPDRAVTWQVLTGQAEMP 302
            +GFPSSLPEAEIKGLLETIGQVD+F+C VDGDSLTCTCRY+ D+DTAKAKKGFHDLEMGEMTLKV++EEAA G    ++ G    D +G   PA       XXXXXXXXXXXXXXXXRFAPPPTGAV LQ GL    G+A  GLLG                           XXXXXXXXXXXXX  P   TPQMKSQ+EIFVGNIPVGTTQQGLVDFLNAAMLKVGLNLQPGNPVTSCRLNSKFAFCVMRNP+EAAKALNLNGIPYLGNVLKMQRPSSY+GPPDRAVTWQV  G+  +P
Sbjct: 1634 EGFPSSLPEAEIKGLLETIGQVDIFRCNVDGDSLTCTCRYSTDDDTAKAKKGFHDLEMGEMTLKVDVEEAAPGTTDTSSAGNAGGDGSGDKAPA-EGSSVEXXXXXXXXXXXXXXXXRFAPPPTGAVDLQGGLGATPGAAGSGLLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPAAMTPQMKSQIEIFVGNIPVGTTQQGLVDFLNAAMLKVGLNLQPGNPVTSCRLNSKFAFCVMRNPEEAAKALNLNGIPYLGNVLKMQRPSSYTGPPDRAVTWQV--GEERVP 1931

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BLAST of mRNA_P-littoralis_Contig86.48.2 vs. uniprot
Match: A0A7S4D6W7_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6W7_HETAK)

HSP 1 Score: 287 bits (734), Expect = 1.300e-86
Identity = 157/362 (43.37%), Postives = 222/362 (61.33%), Query Frame = 0

Query:  198 KSQVEIFVGNIPVGTTQQGLVDFLNAAMLKVGLNLQPGNPVTSCRLNSKFAFCVMRNPDEAAKALNLNGIPYLGNVLKMQRPSSYSGPPDRAVTWQVLTGQAEMPADGMALMQNPTTKLSCEVFVGNIPPETQAPTLQEYLGGALVQVGLCKAP-NPILSIRMNARFAFLEMRTAEDATAALNLDGIPFGGAALSVGRPKKYEGPVTPHKTWFDVLAECSFG------LMGAAGGAEAE--------------------PAPTSTVVRIGNVVTPEELSDDDAQKEVVEDMTEECSKYGTVAAIEIPHVGGAGAGVGFVFVKFHTREDAQKAKKGFGSRTFDGKSVDATYFPEEQFAAKAFA 532
            K++ E+FVGN P GT++  L++FLNAAM++V  N++ GNP+ SCR+++KFAF  +R  +EA   LNLNGIP++G  LK+ RP+ Y+GP   A TWQ LTGQA  PAD  A+  +P TK+  +++VGN  PE   P L+E+LG A+ QVGL +   N IL +R++  FAF+E+R+ E+A+  +NL+GIPF G  L + RP KY GP  PH  W D+LA+   G       M A   A A                     P   S V+ + N+VT ++L+DD+   E++ED  +ECSK+G V  I IP       GVG VFV + + E+A+KA      RTF G +V+A YFPE ++ AK F+
Sbjct:   54 KTKRELFVGNTPPGTSEVVLMEFLNAAMIQVKQNIEEGNPIMSCRMSAKFAFIELRTAEEANNCLNLNGIPFMGYYLKVGRPTKYAGPITPAKTWQQLTGQAP-PADPTAVAVDPQTKIYRDLYVGNCSPEMTEPALKEFLGSAMEQVGLNQQEGNCILQVRLSGTFAFIEVRSVEEASHMMNLNGIPFMGQFLKIKRPTKYPGPEVPHLNWDDILAKYMAGELKAKPKMPAVAAAPAAVPSXXXXXXXXXXXXXXXAGPGTPSKVMTLSNMVTHDDLADDETYDEILEDTQDECSKFGAVQTIAIPRPKDGPHGVGLVFVHYSSEEEAKKAIDALSGRTFAGNTVEAKYFPEAKYLAKDFS 414

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BLAST of mRNA_P-littoralis_Contig86.48.2 vs. uniprot
Match: A0A7S4I336_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I336_9STRA)

HSP 1 Score: 280 bits (715), Expect = 2.620e-85
Identity = 155/356 (43.54%), Postives = 220/356 (61.80%), Query Frame = 0

Query:  190 AAPQTPQMKSQVEIFVGNIPVGTTQQGLVDFLNAAMLKVGLNLQPGNPVTSCRLNSKFAFCVMRNPDEAAKALNLNGIPYLGNVLKMQRPSSYSGPPDRAVTWQVLTGQA---EMPADGMALMQNPTTKLSCEVFVGNIPPETQAPTLQEYLGGALVQVGLCKAP-NPILSIRMNARFAFLEMRTAEDATAALNLDGIPFGGAALSVGRPKKYEGPVTPHKTWFDVLAECSFG---LMGAAGGAEAEPAPTST-------VVRIGNVVTPEELSDDDAQKEVVEDMTEECSKYGTVAAIEIPHVGGAGAGVGFVFVKFHTREDAQKAKKGFGSRTFDGKSVDATYFPEEQFAAKAF 531
            AA    Q K   E+FVGN P GT++  L+ FL+ AM + GL    G+P+ +CR+N KFAF      D A +ALNLNGIP+LG+ LK+ RPS Y+GP   + +WQ LTG A    +   G AL  +   K++ E+F+GN  PE     L ++LG A+ QVGL KAP NPI++ R + +FAF+E+RT ++A +ALNL+ IP+ GA L VGRP KY GP TPH  W D+LA+   G   L    GG  A PAP +        VV +  ++T ++L +DD  KE++ED TEEC ++G++  + IP    +G G   +F+++ T+EDA +A      RTFDG+ V A Y+ E +FAA+ +
Sbjct:   77 AAQNAAQDKVNRELFVGNTPPGTSEMLLIQFLSGAMRRTGLCKPSGSPIVTCRVNQKFAFVECATVDCANRALNLNGIPFLGSCLKVSRPSKYAGPFVPSKSWQELTGTALPNGLAGAGGALAGSAEDKINRELFIGNTTPEMTEQMLSDFLGKAMEQVGLSKAPGNPIVTCRTSGKFAFIELRTTDEAASALNLNNIPYLGAQLRVGRPSKYTGPETPHGNWEDILAKYMSGELQLPSKDGGGGAAPAPAAPHAIDATCVVELCQMLTQQDLENDDEYKEILEDTTEECGQFGSLKRVVIPR---SGPGATKIFLEYATKEDAARAIASLAGRTFDGRKVTAVYYDEARFAAQDY 429

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BLAST of mRNA_P-littoralis_Contig86.48.2 vs. uniprot
Match: A0A7S2V6E6_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6E6_9STRA)

HSP 1 Score: 282 bits (721), Expect = 6.280e-85
Identity = 155/329 (47.11%), Postives = 211/329 (64.13%), Query Frame = 0

Query:  202 EIFVGNIPVGTTQQGLVDFLNAAMLKVGLNLQPGNPVTSCRLNSKFAFCVMRNPDEAAKALNLNGIPYLGNVLKMQRPSSYSGPPDRAVTWQVLTGQAEMPADGMALMQNPTTKLSCEVFVGNIPPETQAPTLQEYLGGALVQVGLC-KAPNPILSIRMNARFAFLEMRTAEDATAALNLDGIPFGGAALSVGRPKKYEGPVTPHKTWFDVLAECSFGLMGAAGGAEAEPAPTSTVVRIGNVVTPEELSDDDAQKEVVEDMTEECSKYGTVAAIEIPHVGGAGAGVGFVFVKFHTREDAQKAKKGFGSRTFDGKSVDATYFPEEQFAAK 529
            E+FVGN P GT++  L++FLNAA+ +V L   PGNP+  CR+++KFAF  +R+ +E    L+LNGIP++G +LK+ RP+ Y GP  +A TWQ LTGQ    A   A + +P+TKL  E+++G+   E     LQE+LG A+ QVGL  +  NPI+ +R +  FAF+E+R+ E+A   LNL+ IPF G  L +GRP KY GP  PH  W DVLA+   G M   GGA A+  P S V+ + N+VT +EL DD   +E+VED  +EC KYG V ++EIP   GA  GVG VF++F +  DA KA      RTF G  VDA YFPE ++  K
Sbjct:  208 ELFVGNTPPGTSELVLMEFLNAALNQVKLTTAPGNPIIGCRVSNKFAFIELRSAEETNNCLSLNGIPFMGQLLKIGRPTKYCGPVIQASTWQALTGQQ---APEGASVVDPSTKLYRELYIGSTTAEMTELGLQEFLGTAMQQVGLTLQEGNPIVQVRHSGTFAFVELRSIEEANNCLNLNSIPFMGQFLKIGRPSKYPGPQVPHLNWEDVLAKYMAGEMPTGGGA-AQQQP-SRVIALSNMVTTDELMDDTTYQEIVEDTRDECGKYGAVQSMEIPRP-GAPHGVGKVFIEFTSTADAAKAIGALKGRTFAGNKVDARYFPESKYQVK 530

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BLAST of mRNA_P-littoralis_Contig86.48.2 vs. uniprot
Match: A0A448YVH2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YVH2_9STRA)

HSP 1 Score: 266 bits (680), Expect = 2.120e-80
Identity = 156/344 (45.35%), Postives = 213/344 (61.92%), Query Frame = 0

Query:  196 QMKSQVEIFVGNIPVGTTQQGLVDFLNAAMLKVGLNLQPGNPVTSCRLNSKFAFCVMRNPDEAAKALNLNGIPYLGNVLKMQRPSSYSGPPDRAVTWQVLTGQAEMPADGMALMQNPTTKLSCEVFVGNIPPETQAPTLQEYLGGALVQVGLCKAP-NPILSIRMNARFAFLEMRTAEDATAALNLDGIPFGGAALSVGRPKKYEGPVTPHKTWFDVLAECSFGLMGAAGGAEAEPAPT-------STVVRIGNVVTPEELSDDDAQKEVVEDMTEECSKYGTVAAIEIPHVGGAGAGVGFVFVKFHTREDAQKAKKGFGSRTFDGKSVDATYFPEEQFAAKAF 531
            Q K   E+FVGN P GT++  L+ FLN AM +V L  +   P+ +CR+NSKFAF  + + + A KALN+NGIP+LG VLK+ RPS Y+GP   A TWQ LTGQA +PA    ++     K++ E+FVGN  PE     L+E+LG A+ QVGL   P NPI S R++ +FAF+E+R+ E+A  ALNL+ IPF GA L VGRP K+ GP   H  W DVLA+   G + A   A  + A         + VV + N++T E+LS ++   E+VED  +EC +YG +  + IP  G  GA    VF+++ + EDA KA K    RTFDG+ V+AT+F E +F  K F
Sbjct:   69 QEKINRELFVGNTPPGTSEMLLLQFLNGAMRRVKLCGEQETPILNCRVNSKFAFVELVSAEMANKALNMNGIPFLGAVLKVSRPSKYAGPHVPARTWQQLTGQA-LPAG--TVLDAEQEKINRELFVGNTTPEMTERMLREFLGNAMEQVGLNVMPGNPITSCRVSGKFAFVELRSPEEAANALNLNNIPFMGAQLRVGRPSKWSGPPDSHGNWEDVLAKYMSGELQAGNTAPGQGAAAMNSNVKATRVVELKNMLTXEDLSVEEEYNELVEDTEQECKQYGQLLNVYIPKKGEPGATK--VFLEYASTEDASKAIKSLEGRTFDGQRVEATFFDETKFMNKTF 407

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BLAST of mRNA_P-littoralis_Contig86.48.2 vs. uniprot
Match: A0A6U2QA35_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2QA35_9STRA)

HSP 1 Score: 265 bits (677), Expect = 8.970e-79
Identity = 153/342 (44.74%), Postives = 214/342 (62.57%), Query Frame = 0

Query:  202 EIFVGNIPVGTTQQGLVDFLNAAMLKVGLNLQPGNPVTSCRLNSKFAFCVMRNPDEAAKALNLNGIPYLGNVLKMQRPSSYSGPPDRAVTWQVLTGQAEMPADGMALMQNPTT---KLSCEVFVGNIPPETQAPTLQEYLGGALVQVGLCKAP-NPILSIRMNARFAFLEMRTAEDATAALNLDGIPFGGAALSVGRPKKYEGPVTPHKTWFDVLAECSFG---LMGAAGGAEAEPAP------TST---VVRIGNVVTPEELSDDDAQKEVVEDMTEECSKYGTVAAIEIPHVGGAGAGVGFVFVKFHTREDAQKAKKGFGSRTFDGKSVDATYFPEEQFA 527
            E+FVGNIP GT+   L +FLN AM + GL      P+   R++ KFAFC + + D+A KALNLNGIP++G  L++ RPS Y+GP   + TWQ LTGQ  +PA   ++  N      K++ E+FVGN  PE    +L+++LG AL QVGL  +P NPI S RM+ +FAF+E+RT ++A  ALNL+ IP+ GA L VGRP K+ G  TPH  W D+LA+   G   L    G A   PAP      T+T   VV + N++T E+L  D   +E++ED  +ECS +G++  +EIP    +G G G +F+++ +  DA KA +G   RTFDG+ V A YF EE+F+
Sbjct:  163 ELFVGNIPPGTSDMLLREFLNGAMRRTGLCAPNATPILQVRVSPKFAFCELVSYDDANKALNLNGIPFMGIALRVSRPSKYTGPYVPSKTWQELTGQP-LPAGMQSVPANGPPGEEKINRELFVGNTTPEMTEESLKDFLGKALEQVGLVNSPGNPINSCRMSGKFAFIELRTVDEAKKALNLNNIPYMGATLRVGRPSKWTGEHTPHGNWEDILAKYMSGELQLPAQPGHAPPVPAPKAPDVPTATQTKVVALTNMLTKEDLQSDQDYEEILEDTKDECSGFGSLVKVEIPR---SGPGEGKIFLQYVSASDATKAIEGLRGRTFDGRKVAAVYFSEEKFS 500

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BLAST of mRNA_P-littoralis_Contig86.48.2 vs. uniprot
Match: A0A7S3XTW3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTW3_HETAK)

HSP 1 Score: 259 bits (662), Expect = 1.320e-77
Identity = 143/331 (43.20%), Postives = 203/331 (61.33%), Query Frame = 0

Query:  198 KSQVEIFVGNIPVGTTQQGLVDFLNAAMLKVGLNLQPGNPVTSCRLNSKFAFCVMRNPDEAAKALNLNGIPYLGNVLKMQRPSSYSGPPDRAVTWQVLTGQAEMPADGMALMQNPTTKLSCEVFVGNIPPETQAPTLQEYLGGALVQVGLCKAP-NPILSIRMNARFAFLEMRTAEDATAALNLDGIPFGGAALSVGRPKKYEGPVTPHKTWFDVLAECSFG------LMGAAGGAEAE--------------------PAPTSTVVRIGNVVTPEELSDDDAQKEVVEDMTEECSKYGTVAAIEIPHVGGAGAGVGFVFVKFHTREDAQK 501
            K++ E+FVGN P GT++  L++FLNAAM++V  N++ GNP+ SCR+++KFAF  +R  +EA   LNLNGIP++G  LK+ RP+ Y+GP   A TWQ LTGQA  PAD  A+  +P TK+  +++VGN  PE   P L+E+LG A+ QVGL +   N IL +R++  FAF+E+R+ E+A+  +NL+GIPF G  L + RP KY GP  PH  W D+LA+   G       M A   A A                     P   S V+ + N+VT ++L+DD+   E++ED  +ECSK+G V  I IP       GVG VFV + + E+A+K
Sbjct:   54 KTKRELFVGNTPPGTSEVVLMEFLNAAMIQVKQNIEEGNPIMSCRMSAKFAFIELRTAEEANNCLNLNGIPFMGYYLKVGRPTKYAGPITPAKTWQQLTGQAP-PADPTAVAVDPQTKIYRDLYVGNCSPEMTEPALKEFLGSAMEQVGLNQQEGNCILQVRLSGTFAFIEVRSVEEASHMMNLNGIPFMGQFLKIKRPTKYPGPEVPHLNWDDILAKYMAGELKAKPKMPAVAAAPAAVPSXXXXXXXXXXXXXXXAGPGTPSKVMTLSNMVTHDDLADDETYDEILEDTQDECSKFGAVQTIAIPRPKDGPHGVGLVFVHYSSEEEAKK 383

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BLAST of mRNA_P-littoralis_Contig86.48.2 vs. uniprot
Match: A0A835ZHK3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHK3_9STRA)

HSP 1 Score: 260 bits (664), Expect = 9.570e-77
Identity = 146/346 (42.20%), Postives = 211/346 (60.98%), Query Frame = 0

Query:  198 KSQVEIFVGNIPVGTTQQGLVDFLNAAMLKVGLNLQPGNPVTSCRLNSKFAFCVMRNPDEAAKALNLNGIPYLGNVLKMQRPSSYSGPPDRAVTWQVLTGQAE------MPADGMALMQ-NPTTKLSCEVFVGNIPPETQAPTLQEYLGGALVQVGLC-KAP-NPILSIRMNARFAFLEMRTAEDATAALNLDGIPFGGAALSVGRPKKYEGPVTPHKTWFDVLAECSFGLMGAAGGAE-------AEPAPTSTVVRIGNVVTPEELSDDDAQKEVVEDMTEECSKYGTVAAIEI--PHVGGAGA-----GVGFVFVKFHTREDAQKAKKGFGSRTFDGKSVDATY 520
            K+Q+E+FVGN P  T++  L++FLNAAM +V LN  PGNP+  CR+++KFAF  +R+ DE    L+LN IP++G  LK+ RPS Y GPP    TWQ LTGQ E      MP  G ++   +P TK+  E++VGN+ P     ++ E+LG  L +VGL   AP NP++  R +  F+F+EMR+ EDA A LNL+GIPF G+ L + RP KY GP+TP  TW DVLA     L+   GGA+       A   P + V+R+ N+++ ++L+D++   ++ E+   EC+ +G V  + I  P    A A     GVG+VFV+F   + A+KA     +RTFD K + + Y
Sbjct:   45 KTQLELFVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELRSVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPATKVYRELYVGNVQPTMTEASIAEFLGTTLQKVGLATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISRPAKYAGPMTPAMTWPDVLAR----LVAQGGGADKALGTPAAPTQPATRVLRLNNMLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTATGVGYVFVEFEEADAARKAMLSLSTRTFDNKKLSSVY 386

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig86.48.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig86.48.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5LDH7_9PHAE	6.690e-292	84.77	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LTD8_ECTSI	2.360e-154	93.03	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LTD9_ECTSI	4.050e-95	72.43	RNA-binding region-containing protein (RNP-1) n=1 ...	[more]
A0A7S4D6W7_HETAK	1.300e-86	43.37	Hypothetical protein n=2 Tax=Heterosigma akashiwo ...	[more]
A0A7S4I336_9STRA	2.620e-85	43.54	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]
A0A7S2V6E6_9STRA	6.280e-85	47.11	Hypothetical protein n=2 Tax=Fibrocapsa japonica T...	[more]
A0A448YVH2_9STRA	2.120e-80	45.35	Uncharacterized protein n=1 Tax=Pseudo-nitzschia m...	[more]
A0A6U2QA35_9STRA	8.970e-79	44.74	Hypothetical protein n=1 Tax=Leptocylindrus danicu...	[more]
A0A7S3XTW3_HETAK	1.320e-77	43.20	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A835ZHK3_9STRA	9.570e-77	42.20	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 4..73 e-value: 0.36 score: 10.5 coord: 436..519 e-value: 5.7E-6 score: 35.8 coord: 319..393 e-value: 5.0E-6 score: 36.0 coord: 202..277 e-value: 1.3E-6 score: 38.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 320..390 e-value: 2.0E-4 score: 21.1 coord: 203..275 e-value: 8.4E-5 score: 22.3 coord: 460..515 e-value: 3.5E-7 score: 30.0
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 318..397 score: 10.65013
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 435..523 score: 11.519956
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 201..281 score: 9.814416
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 436..519 e-value: 1.4E-5 score: 34.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 316..409 e-value: 9.5E-16 score: 59.8 coord: 196..300 e-value: 1.7E-17 score: 65.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 430..532 e-value: 3.6E-26 score: 93.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..137
None	No IPR available	PANTHER	PTHR23139	RNA-BINDING PROTEIN	coord: 6..86 coord: 432..527 coord: 119..283 coord: 312..403
None	No IPR available	CDD	cd12232	RRM3_U2AF65	coord: 434..519 e-value: 1.28392E-24 score: 95.7006
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 5..76
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 203..283
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 317..522

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig86	contig	P-littoralis_Contig86:120230..137031 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig86.48.2	mRNA_P-littoralis_Contig86.48.2	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig86 120010..138938 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig86.48.2 ID=prot_P-littoralis_Contig86.48.2|Name=mRNA_P-littoralis_Contig86.48.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=534bp
MVAMMIIKGFPSSLPEAEIKGLLETIGQVDVFQCAVDGDSLTCTCRYAAD
EDTAKAKKGFHDLEMGEMTLKVEIEEAAAGEAAETAGGTTNPDNGSSVPA
PAEDSAVEEKKPAAEEPPRRKKSRFAPPPTGAVGLQTGLAGSAVGGLLGI
PGLGGGASVGLPPASVYGASGVGLGGLGLPGAMGSLGGLAAPQTPQMKSQ
VEIFVGNIPVGTTQQGLVDFLNAAMLKVGLNLQPGNPVTSCRLNSKFAFC
VMRNPDEAAKALNLNGIPYLGNVLKMQRPSSYSGPPDRAVTWQVLTGQAE
MPADGMALMQNPTTKLSCEVFVGNIPPETQAPTLQEYLGGALVQVGLCKA
PNPILSIRMNARFAFLEMRTAEDATAALNLDGIPFGGAALSVGRPKKYEG
PVTPHKTWFDVLAECSFGLMGAAGGAEAEPAPTSTVVRIGNVVTPEELSD
DDAQKEVVEDMTEECSKYGTVAAIEIPHVGGAGAGVGFVFVKFHTREDAQ
KAKKGFGSRTFDGKSVDATYFPEEQFAAKAFAS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR003954	RRM_dom_euk
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035979	RBD_domain_sf