prot_P-littoralis_Contig86.42.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig86.42.4
Unique Nameprot_P-littoralis_Contig86.42.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length424
Homology
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BLAST of mRNA_P-littoralis_Contig86.42.4 vs. uniprot
Match: D8LTE0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTE0_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 3.040e-53
Identity = 178/261 (68.20%), Postives = 197/261 (75.48%), Query Frame = 0 
Query:    1 MRSAVVLLGFLLASAQAFYIPAQSRGALPAASTSQTQASSFVGQ--GVARRTAPSTRRRATLVASLEDIEKRLAEAEKAAAKKLAPAXXXXXXXXAAPXXXXXXXXXXXXXAAPVAAVAPVXXXXXXXXXXXXXXXXXXXXXSIATGEVAEGVALGALPWLVAPVVALAAARPLLSKGVAARDADQKAKAAEEAAAXXXXARAAQMQGLTDSDQGALKAIGAVAAVCLGGLLVQPLLTPSDIAAVAPKPAAIVQELKAAPA 259
            MRSAVVLLGFLLASAQAFYIPA++R AL       +Q SSF+GQ   VA R APS RR A LVASLEDIEK+L   EKAAA      XXXXXXXX   XXXXXXXXXXXXX          XXXXXXXXXXXXXXXX     ++ATGEVAEGVALGALPW+VAPVVALAA RP++SKGVAARDA+QKAKA EEA A    ARAA+M+GLT SD+GA+KA+ AVAAVCLGGLLVQPL  P D+A++  KP   VQ  KA PA
Sbjct:    1 MRSAVVLLGFLLASAQAFYIPARTRPAL------NSQPSSFLGQTAAVAPRAAPSARR-AILVASLEDIEKKLIADEKAAAXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKSSSAVATGEVAEGVALGALPWVVAPVVALAALRPVISKGVAARDAEQKAKAIEEAKAAEAAARAAKMEGLTASDEGAVKALSAVAAVCLGGLLVQPLFAPPDLASLPAKPTPTVQTKKADPA 251
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BLAST of mRNA_P-littoralis_Contig86.42.4 vs. uniprot
Match: A0A835ZCF2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCF2_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 4.000e-5
Identity = 52/115 (45.22%), Postives = 66/115 (57.39%), Query Frame = 0 
Query:  146 EVAEGVALGALPWLVAPVVALAAARPLLSKGVAARDADQKAKAAEEAAAXXXXARAAQMQG-LTDSDQGALKAIGAVAAVCLGGLLVQPLLTPSDIAAVAPKPAAIVQELKAAPA 259
            +VA GV LG LPWL AP+VAL A RP+L+KG A                XXXX       G LT++D+  L A+ AVAA+ LGG+  QPLL+  + +A    P A+VQ   AAPA
Sbjct:   68 QVAAGVGLGLLPWLAAPLVALGAVRPILAKGAAXXXXXXXXXXXXXXXXXXXXXXXXDAAGGLTEADKKTLTAVLAVAALSLGGIFAQPLLSGGEKSA----PPAVVQ---AAPA 175
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig86.42.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTE0_ECTSI3.040e-5368.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZCF2_9STRA4.000e-545.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 57..77
NoneNo IPR availableCOILSCoilCoilcoord: 185..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..321
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..324
NoneNo IPR availablePANTHERPTHR48148KERATINOCYTE PROLINE-RICH PROTEINcoord: 83..332

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig86contigP-littoralis_Contig86:102265..106463 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig86.42.4mRNA_P-littoralis_Contig86.42.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig86 99224..109105 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig86.42.4 ID=prot_P-littoralis_Contig86.42.4|Name=mRNA_P-littoralis_Contig86.42.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=424bp
MRSAVVLLGFLLASAQAFYIPAQSRGALPAASTSQTQASSFVGQGVARRT
APSTRRRATLVASLEDIEKRLAEAEKAAAKKLAPAPAPAPKGKAAPKDAA
KAAVKSLPKAAPVAAVAPVPLPTPPVPVPVPTPAKKSSSSSIATGEVAEG
VALGALPWLVAPVVALAAARPLLSKGVAARDADQKAKAAEEAAAAEAAAR
AAQMQGLTDSDQGALKAIGAVAAVCLGGLLVQPLLTPSDIAAVAPKPAAI
VQELKAAPAPAPKKETPAPAPAPKKEEPAPAPAPKVEPAPAPAPKAEPAP
APAPKVEPAPEPAPKVEPAPKVDHAPAPGEDAVAVLFFFFLFFLRSRGSP
CYGRESICTIQAWMIIPFCSLCMTVFCVEEHCKVAKCEIRRRECEIRRRD
SNELTRRTAGARRALSEIEKLEK*
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