mRNA_P-littoralis_Contig859.38.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig859.38.3 vs. uniprot
Match: D8LM04_ECTSI (CID domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM04_ECTSI) HSP 1 Score: 663 bits (1710), Expect = 4.240e-221 Identity = 528/772 (68.39%), Postives = 559/772 (72.41%), Query Frame = 3
Query: 861 MGKVSLEEYIDLFRAKAEQMGEFPDKIIINALTGTAKRHRADKGPAITAVLQSMLTDPAHPAKHKLPICFLVDSIVKNISDPYADLFENGLTRWFCSAYDAVDDKSKRHLARVVATWEVQSVFSAEKRKEIQRYMLNSKPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLHQXXXXXXXXXXXXXTVTGAPDIPAMINSRMKQLLDQQLLELGESSSMSLDDLWRTNAELASGFRLVAQAQVHEQLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFGRAVQVANEVAAGARVALDASLRGDLSGAHKQAAEAAGKAVMLACLLGGDAAASVDGPGGTGGGGVGVYLADLDPLDVRALARGNPAAVRRLYGEGFPFWCKQDGTRFRTQVQLDAHMDLLFRRKRARREQKGVA-SREWYCTDEEWMTDFGRLAPPADSGAGXXXXXXXXXXXXXXXXXXXXXXXPDGSKSCVPADERFSKCRICGDRFLMFYDNDEEEWMYRNACYISVEAGEGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGPKQIIVHKLCLDVSGLKDKDEINWVDLMPGTPRQRKRPAEVDGKLEASFFGKADSDDADVGEEHDDDGGNGTAEDGASDNDGGEGVEGXXXXXXXXXXXXGRGDAGPPLKRAKAEPREGEENGAGEGGVAADVVKAKKEGREEGAD---DMDEELDFEA 3161
MGKV+LEEYIDLFR KAEQMGEFPDKIIINALTGTAKRHR DK AI VLQ+ML DP+HPAKHKLPICFLVDS+VKNI+DP+ADLFENGLTRWFCSAYDAVD+KSK+HL RVVATWEVQS+FSA+KRKEIQRYMLN+KPAA XXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX XXXX XXXXXXXXXXXXX DI AM++SRMKQLLDQQ DFGRAVQVANEVAAGARVALDASLRGDLSGA QAAEAAGKA MLACLLGGDAAA+V G G G GVGVYLADLDPLDVR+LARGNPAAVRRLYGEGFPFWCKQDGTRF Q QLDAHMDLLFRRK ARREQKGVA SREWYCTDEEWMTDFGRLAPPA G+ XXXXXXXXXXXXXXXXXXXXXXX DGSKSCVPADERFSKCRICGDRFLMFYDNDEEEWMYRNACY++V+ G GEXXXXXXXXXXXXXXX GG +QIIVHKLCLDVSGL+DKDEI W DLMPGTPRQ+KRPAE L+A+FFG+ D A+ +E D G G + G +D G G XXXXXXXXXXXX D GPPLKRAKAE EENG GE A VVKA++ G G DMDEELDFEA
Sbjct: 1 MGKVTLEEYIDLFRGKAEQMGEFPDKIIINALTGTAKRHRTDKAQAIATVLQNMLMDPSHPAKHKLPICFLVDSLVKNITDPFADLFENGLTRWFCSAYDAVDEKSKKHLGRVVATWEVQSIFSADKRKEIQRYMLNAKPAAASLSXXXXXXXXXXXXXXXXXXXXXXXXXXPLPTVAPYQPPQPQXXXXXXXXXXXXXXXXXXXXXXXASAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIQAMVDSRMKQLLDQQ--------------------------------------------------------------------------DFGRAVQVANEVAAGARVALDASLRGDLSGAQVQAAEAAGKAAMLACLLGGDAAAAVGGGLGGAGAGVGVYLADLDPLDVRSLARGNPAAVRRLYGEGFPFWCKQDGTRFAKQAQLDAHMDLLFRRKHARREQKGVAASREWYCTDEEWMTDFGRLAPPA--GSXXXXXXXXXXXXXXXXXXXXXXXXXDGSKSCVPADERFSKCRICGDRFLMFYDNDEEEWMYRNACYVTVKGG--GEXXXXXXXXXXXXXXXAGGAPGEAA-------------GGARQIIVHKLCLDVSGLRDKDEITWADLMPGTPRQKKRPAEGGDALDAAFFGEGGDDAAEQEDEKDGAGETGDSS-GTHVSDSGGGHXXXXXXXXXXXXXXXGEDDGPPLKRAKAEGATEEENGFGEVD-ATGVVKAEEGGSGAGQGEVYDMDEELDFEA 679
BLAST of mRNA_P-littoralis_Contig859.38.3 vs. uniprot
Match: A0A835ZEB3_9STRA (CID domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEB3_9STRA) HSP 1 Score: 116 bits (290), Expect = 1.830e-22 Identity = 111/305 (36.39%), Postives = 136/305 (44.59%), Query Frame = 3
Query: 2148 EGFPFWCKQDGTRFRTQVQLDAHMDLLF------------RRKRARREQK-GVASREWYCTDEEWMTDFGRLA------------PPADSGAGXXXXXXXXXXXXXXXXXXXXXXXPDGSKSC---------------------------------------------------VPADERFSKCRICGDRFLMFYDNDEEEWMYRNACYISVEAGEGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGPKQIIVHKLCLDVSGLKDKDEINWVDLMP----GTPRQRKRPAEVDG 2822
EG P+ CKQDG RF TQ LDAH+DLLF +R+R RREQ A+R WYCT +W+TDFG P A + AG + SC VPAD+ S+CRICG+ F MFYD DEEEWM+RNACY ++ + XXXXXXXXXXXXXXXXXXXXXX P IIVH+LCLD SG+++ + + +L+P G +RKR A DG
Sbjct: 636 EGRPYLCKQDGQRFLTQAALDAHLDLLFXXXXXXXXXXXXQRRRMRREQTTAAATRPWYCTMAQWVTDFGSKTADQKGRDAAAAQPGAAAAAGEQQPAGAPDAGADAAGDAFGGGAAEQVLSCGTVVQRASXXXXXXXXXXXXXXGISGSAXXXXXXXXXXXXSIGPVDYNSFSVPADDEQSRCRICGEPFEMFYDGDEEEWMFRNACYANLAPEDANSANTVSLKXXXXXXXXXXXXXXXXXXXXXXAPDSG---AAPTAIIVHRLCLDASGVREGELLRVANLLPTTAPGAAGKRKRDAAGDG 937
BLAST of mRNA_P-littoralis_Contig859.38.3 vs. uniprot
Match: T0QPI6_SAPDV (CID domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QPI6_SAPDV) HSP 1 Score: 95.5 bits (236), Expect = 2.150e-16 Identity = 56/156 (35.90%), Postives = 79/156 (50.64%), Query Frame = 3
Query: 2094 DVRALARGNPAAVRRLYGEGFPFWCKQDGTRFRTQVQLDAHMDLLFRRKRARREQ-KGVASREWYCTDEEWMTDFGRLAPPADSGAGXXXXXXXXXXXXXXXXXXXXXXXPDGSKSCVPADERFSKCRICGDRFLMFYDNDEEEWMYRNACYISVE 2558
D++ R A + LY EG PF C G RF + QL HMD LF+ RA+RE+ KG SR WY +E+W TDF ++ + ++ VP DE +KCRICG++F +D+DEEEWMY+NA +++
Sbjct: 359 DIQVNKRRIDANIYLLY-EGLPFVCAGSGVRFANEKQLSEHMDFLFQYNRAQRERTKGGNSRPWYPDEEQWATDFCAVSSTKEVDGVAAIAQQEAEVDKDVL-----------DQARVPVDEATTKCRICGEQFSKCWDDDEEEWMYQNAVRGTIQ 502
BLAST of mRNA_P-littoralis_Contig859.38.3 vs. uniprot
Match: F0W6S2_9STRA (Uncharacterized protein AlNc14C26G2558 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W6S2_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 4.910e-15 Identity = 54/149 (36.24%), Postives = 73/149 (48.99%), Query Frame = 3
Query: 2130 VRRLYGEGFPFWCKQDGTRFRTQVQLDAHMDLLFRRKRARREQ-KGVASREWYCTDEEWMTDFGRLAPPADSGAGXXXXXXXXXXXXXXXXXXXXXXXPDGSKSCVPADERFSKCRICGDRFLMFYDNDEEEWMYRNACYISVEAGEGG 2573
+++LY P C++ G RFR Q +LDAH+D LF+ R+ +E+ KG SR WY E+W TDF + + + VP DE +KCRICG+ F +D DEEEWMY NA SV A + G
Sbjct: 463 IQKLYA-ALPLVCRESGVRFREQKKLDAHLDFLFQYNRSVKERGKGGISRAWYPNKEQWTTDFSTDHTARKNTSSSFFDQDSKKMQDDKEDQVLMELR----NARVPVDESVTKCRICGEPFEKCWDEDEEEWMYINAIVGSVHAHDEG 606
BLAST of mRNA_P-littoralis_Contig859.38.3 vs. uniprot
Match: W4G7E6_9STRA (CID domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G7E6_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.290e-14 Identity = 58/151 (38.41%), Postives = 73/151 (48.34%), Query Frame = 3
Query: 2130 VRRLYGEGFPFWCKQDGTRFRTQVQLDAHMDLLFRRKRARREQ-KGVASREWYCTDEEWMTDFGRLA-PPADSGAGXXXXXXXXXXXXXXXXXXXXXXXPDGSK-----SCVPADERFSKCRICGDRFLMFYDNDEEEWMYRNACYISVEA 2561
V RLY + P G RF+ Q QL HMD LF RA RE+ KG SR WY + +W TDF ++ ++ AG PD K S VP D +KCRICG+ F +D DEEEWMY+NA S+E+
Sbjct: 396 VYRLY-DALPHVSTSSGLRFKDQAQLSVHMDFLFHYNRALRERTKGGISRSWYPNEAQWTTDFCAVSNSKEETSAGFVQLEDKLTV-------------PDFDKDALNASRVPVDGSITKCRICGEPFTKCWDEDEEEWMYQNAVVGSIES 532
BLAST of mRNA_P-littoralis_Contig859.38.3 vs. uniprot
Match: A0A7S2DR18_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DR18_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 4.000e-14 Identity = 49/155 (31.61%), Postives = 79/155 (50.97%), Query Frame = 3
Query: 2103 ALARGNPAAVRRLYGEGFPFWCKQDGTRFRTQVQLDAHMDLLFRRKRARREQK--GVASREWYCTDEEWMTDFGRLAPPADSGAGXXXXXXXXXXXXXXXXXXXXXXXPDGSKSCVPADERFSKCRICGDRFLMFYDNDEEEWMYRNACYISVEA 2561
+L + N A + +L+ P + DG +F+ Q QL AH ++L R R RR++ G ASR W+CT E+W +DF + A + + + + D+ +KCRICG+ F MF++++ EEWMYRNA + ++A
Sbjct: 132 SLNQKNAAVISQLFR--LPHYSSLDGMQFKHQQQLVAHEEMLQTRIRERRDEAAHGSASRPWFCTVEQWCSDFAQDASDSTN-------------PMEGVPVESEDADVPAKEVLIVVDQAVTKCRICGEPFEMFWEDEVEEWMYRNAVRVKIQA 271
BLAST of mRNA_P-littoralis_Contig859.38.3 vs. uniprot
Match: A0A024U0Z4_9STRA (CID domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U0Z4_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 2.750e-13 Identity = 52/148 (35.14%), Postives = 70/148 (47.30%), Query Frame = 3
Query: 2130 VRRLYGEGFPFWCKQDGTRFRTQVQLDAHMDLLFRRKRARREQ-KGVASREWYCTDEEWMTDFGRLA-PPADSGAGXXXXXXXXXXXXXXXXXXXXXXXPDGSKSCVPADERFSKCRICGDRFLMFYDNDEEEWMYRNACYISVEAGE 2567
V RLY + P G RF+ Q QL HMD LF RA RE+ KG SR WY + +W TDF ++ ++ AG + + VP D +KCRICG+ F +D DEEEWMY+NA ++ +
Sbjct: 402 VYRLY-DALPHVSSSSGLRFKDQAQLSKHMDFLFHYNRALRERTKGGISRSWYPNEAQWTTDFCAVSNSKEETSAGFVQAEAKTAVPELDKEAL--------NAARVPVDGSITKCRICGESFTKCWDEDEEEWMYQNAVVGTIRTND 540
BLAST of mRNA_P-littoralis_Contig859.38.3 vs. uniprot
Match: A0A068RYV6_9FUNG (Mrna cleavage factor complex component n=2 Tax=Lichtheimia corymbifera JMRC:FSU:9682 TaxID=1263082 RepID=A0A068RYV6_9FUNG) HSP 1 Score: 83.6 bits (205), Expect = 1.610e-12 Identity = 55/167 (32.93%), Postives = 81/167 (48.50%), Query Frame = 3
Query: 2091 LDVRALARGNPAAVRRLYGEGFPFWCKQDGTRF----RTQVQLDAHMDLLFRRKRARREQ-KGVASREWYCTDEEWMTDFG-----RLAPP----ADSGAGXXXXXXXXXXXXXXXXXXXXXXXPDGSKSCVPADERFSKCRICGDRFLMFYDNDEEEWMYRNACYI 2549
L+ + L P AV LY G P CKQ G R+ + Q ++DAH+D FR+ R +E+ K SR W+ T++EW++ G AP + SG+G PD +P + C ICG+RF+ F+++DEEEWMY+NA +
Sbjct: 455 LESKDLQIARPGAVEVLYS-GLPLQCKQCGFRYPKTEQGQSKMDAHLDSHFRQNRRMKERVKRGLSRSWFVTEDEWISGAGGELASHQAPTFLTDSTSGSGNAHQHGNVGGSPSAQAGSETIG-PDSQMVVMPDENNRKPCPICGERFVDFWNDDEEEWMYKNAVLV 619
BLAST of mRNA_P-littoralis_Contig859.38.3 vs. uniprot
Match: A0A077X026_9FUNG (CID domain-containing protein n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077X026_9FUNG) HSP 1 Score: 82.8 bits (203), Expect = 1.630e-12 Identity = 53/163 (32.52%), Postives = 78/163 (47.85%), Query Frame = 3
Query: 2091 LDVRALARGNPAAVRRLYGEGFPFWCKQDGTRF----RTQVQLDAHMDLLFRRKRARREQ-KGVASREWYCTDEEWMTDFG-RLAP---PADSGAGXXXXXXXXXXXXXXXXXXXXXXXPDGSKSCVPADERFSKCRICGDRFLMFYDNDEEEWMYRNACYIS 2552
L+ + L P AV LY G P CKQ G R+ + Q ++DAH+D FR+ R +E+ K SR W+ T++EW++ G LA P PD +P + C ICG+RF+ F+++DEEEWMY+NA ++
Sbjct: 273 LESKDLQIARPGAVEVLYS-GLPLQCKQCGFRYPKTEQGQSKMDAHLDSHFRQNRRMKERVKRGLSRSWFVTEDEWISGAGGELASHQAPTFLNDSTSSAHPHGHVGSPSAQAGSETLGPDSQVVVMPDENNRKPCPICGERFVDFWNDDEEEWMYKNAVLVN 434
BLAST of mRNA_P-littoralis_Contig859.38.3 vs. uniprot
Match: A0A8H7QZ07_9FUNG (CID domain-containing protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7QZ07_9FUNG) HSP 1 Score: 82.8 bits (203), Expect = 2.140e-12 Identity = 53/160 (33.12%), Postives = 75/160 (46.88%), Query Frame = 3
Query: 2091 LDVRALARGNPAAVRRLYGEGFPFWCKQDGTRF----RTQVQLDAHMDLLFRRKRARREQ-KGVASREWYCTDEEWMTDFG--RLAPPADSGAGXXXXXXXXXXXXXXXXXXXXXXXPDGSKSCVPADERFSKCRICGDRFLMFYDNDEEEWMYRNACYI 2549
LD + L P A+ LY P CKQ G R+ + Q ++DAH+D FR+ R +E+ K SR W+ T EEW+ G + A + PD +P D+ C ICG+RF+ F+++DEEEWMY+NA I
Sbjct: 365 LDSKDLQIARPGAIELLYSAK-PLQCKQCGFRYPKTDKGQAKMDAHLDAHFRQNRKMKERVKRGLSRSWFVTVEEWINGEGGESTSQQAPAFLHDGMGHVNSKSTEKSAQPSEETINPDHYTVIMPNDDSRKPCAICGERFIDFWNDDEEEWMYKNAIMI 523 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig859.38.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig859.38.3 >prot_P-littoralis_Contig859.38.3 ID=prot_P-littoralis_Contig859.38.3|Name=mRNA_P-littoralis_Contig859.38.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=768bp MGKVSLEEYIDLFRAKAEQMGEFPDKIIINALTGTAKRHRADKGPAITAVback to top mRNA from alignment at P-littoralis_Contig859:96063..103473+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig859.38.3 ID=mRNA_P-littoralis_Contig859.38.3|Name=mRNA_P-littoralis_Contig859.38.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=7411bp|location=Sequence derived from alignment at P-littoralis_Contig859:96063..103473+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig859:96063..103473+ >mRNA_P-littoralis_Contig859.38.3 ID=mRNA_P-littoralis_Contig859.38.3|Name=mRNA_P-littoralis_Contig859.38.3|organism=Pylaiella littoralis U1_48|type=CDS|length=2304bp|location=Sequence derived from alignment at P-littoralis_Contig859:96063..103473+ (Pylaiella littoralis U1_48)back to top |