mRNA_P-littoralis_Contig855.5.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig855.5.1 vs. uniprot
Match: A0A6H5JML2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML2_9PHAE) HSP 1 Score: 440 bits (1132), Expect = 9.870e-140 Identity = 293/612 (47.88%), Postives = 352/612 (57.52%), Query Frame = 1
Query: 184 VENQEVEQGQNSDPGDEGGRGADAA-STWEEDSPAGGNGRRDGRGSADIENEEEEVAGADEMSFVKDDDNFGSEDDFGKSVAKHINEQQERQ-----QQDQRRQTWEEGERVRGVQGS----GRGRNGDDVTAQRAPFVRPRRLSMEKNSELERALAQELLGVGRRA-ERFMGEEEADREEEHQLTLQNMTPGDLANLFDDDEDDDVLPRGHKNRISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGWRRRPKTQNGIG----KTDDVI------DTSAGGSRRESRRKSFALLVEASNAYPSRGGRQHA---AEPS-RLRKSSLSHSAEQQVGNDGGSXXXXXXXXXXXGDAPETSDDVPL------GGEKRRAEVPGVEGGTVLSEKNGDGEXXXXXXXXXXXXERQESVDSQVRKPKGPGPIVMNTSECEYAVVRECALELDWQLCETKFGPQSDPLTKKPRTDGLVLHTTADASYVCTHRGKCNKLWNVMWHDHGNFEEHLRGLQSFQHYSHLPGLSFFARKAGLAMLMSRMYHEAPKEYKFYPETWVLPAEMADFRAEFGPKGMSKSVFIVKPDSGCQGKGIFLTKEAS 1926
+ ++V +G++SD G+E GR D S+ EE GNGR+ G G D +++ AD SFVKDD+ GSED+FG+ V KHI Q+ Q+ + T E+ R RG GS G G+ DD A RA FVRPRRLSME++SEL+R LA+EL+G+ R A ++ +GEEEA+REEEH+ TL NMTPG LA+LFD+D+DD +N RRR + GI + DDV T+ S R S L VE N Y SR EPS RL+KSS S + + N G GDA +D GGEK G GTV+ E +GE +R++S R+PKGPGPIVMN S CEYAVVRECAL L W LCETKF SDPLTKKPRTD + TADASY CTH+G CNKLWNVMWHDHGNFEE+L+GLQSFQ+YSHLPGLSFFARKAGLAMLMSRMYHEAPKEYKF+PETWVLPAE+ +FR EFGPKG SKS FI+KPD+GCQGKGIFLTK+ S
Sbjct: 157 TQERDVARGKSSDDGNETGRARDNEDSSREEGLATAGNGRKGGSGDDD----HNDISSADGASFVKDDNLSGSEDEFGRGVTKHIGNNQQXXXXXXXQRLSQSPTEEQSGRRRGSIGSSGSSGNGKGTDDTPA-RAAFVRPRRLSMERDSELQRTLAKELMGMSRAAADKPVGEEEAEREEEHRQTLLNMTPGVLASLFDEDDDDGDGEWFQRNA--------DLPRPSTTDGDGFDAGTTDAGVNKRHRRSLSSHSECRAPSCSRRRRRSDEAGIAAESTRNDDVXXXXXXXSTNTEVSPTPKRTPSATLRVETRNPYLSRSSHNSDKGDVEPSSRLQKSSASRLSRGKQRNGG----------TTLGDAAAAPEDPRSDRNGDGGGEKTAGSGDGEREGTVVVESGAEGEAEGTGGE-----QRRDSESGLNRRPKGPGPIVMNASHCEYAVVRECALRLGWSLCETKFSRHSDPLTKKPRTDEANPNKTADASYTCTHKGMCNKLWNVMWHDHGNFEEYLQGLQSFQYYSHLPGLSFFARKAGLAMLMSRMYHEAPKEYKFFPETWVLPAEINEFREEFGPKGTSKSTFIIKPDAGCQGKGIFLTKQLS 740
BLAST of mRNA_P-littoralis_Contig855.5.1 vs. uniprot
Match: D7FXY6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY6_ECTSI) HSP 1 Score: 437 bits (1123), Expect = 1.460e-133 Identity = 288/602 (47.84%), Postives = 347/602 (57.64%), Query Frame = 1
Query: 184 VENQEVEQGQNSDPGDEGGRGADAA-STWEEDSPAGGNGRRDGRGSADIENEEEEVAGADEMSFVKDDDNFGSEDDFGKSVAKHINEQQERQQQDQRRQTWEEGERVRGVQGSGR---------GRNGDDVTAQRAPFVRPRRLSMEKNSELERALAQELLGVGRRA-ERFMGEEEADREEEHQLTLQNMTPGDLANLFDDDEDDDVLPRGHKNRISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGWRRRPKTQNGIGKTDDVIDTSAGGSRRESRRKSFALLVEASNAYPSRGGRQHAA---EPS-RLRKSSLSHSAEQQVGNDGGSXXXXXXXXXXXGDA------PETSDDVPLGGEKRRAEVPGVEGGTVLSEKNGDGEXXXXXXXXXXXXERQESVDSQVRKPKGPGPIVMNTSECEYAVVRECALELDWQLCETKFGPQSDPLTKKPRTDGLVLHTTADASYVCTHRGKCNKLWNVMWHDHGNFEEHLRGLQSFQHYSHLPGLSFFARKAGLAMLMSRMYHEAPKEYKFYPETWVLPAEMADFRAEFGPKGMSKSVFIVKPDSGCQGKGIFLTKEAS 1926
E ++VE+G SD G+E GR DAA S EE GNGR+ G G+ D ++ AD SFVKDD+ GSED+FG+ VAKHI Q++++++QR + + + + SG G+ DD FVRPRRLSME +SEL+R LA EL+G+ R A ++ +GEEE +REEEH+ TL NMTPG LA+LFDD +N XXXXXX + +G+ +D T+ S R+ S E N YP R EPS RLRKSS S + + N G GDA P + D GGEK G GTV+ E GE +R++S R+PKGPGPIVMN S CEYAVVRECALEL W LCETKF SDPLTKKPRTD + TADASY CTH+G CNKLWNVMWHDHGNFEE+L+GLQSFQ+YSHLPGL+FFARKAGLAMLMSRMYHEAPKEYKF+PETWVLPAEM +FR EFGPKG SKS+FI+KPD+GCQGKGIFLTK+ S
Sbjct: 155 TEEKDVERGTGSDGGNETGRTRDAAGSNREEGLATAGNGRKGGSGNDD----HNDIGSADGASFVKDDNLSGSEDEFGRGVAKHIGNNQQQKRREQRHRPSQSPNEEQSGRRSGSTXXXXXXXSGKGADDTLP---TFVRPRRLSMECDSELQRTLANELMGMSRAAADKSVGEEEVEREEEHRQTLLNMTPGVLASLFDDXXXXXXGEWFQRNSDPPRPSTTDGGDAGSTDAGVNKRHRRSLSSHSEGRAPSSXXXXXXSDEADIATESTRNDGVHDDNDDDSTNTEVSPTPKRKPSATFRAETRNPYPRRSSDDRDKGDLEPSSRLRKSSASRLSRGKQRNGG----------TTLGDAAAAPEDPRSDRDGDGGGEKAAGSGDGEREGTVVVESGAVGEAEGTGGE-----QRRDSGGGLNRRPKGPGPIVMNASHCEYAVVRECALELGWSLCETKFSRHSDPLTKKPRTDEANPNKTADASYTCTHKGMCNKLWNVMWHDHGNFEEYLQGLQSFQYYSHLPGLAFFARKAGLAMLMSRMYHEAPKEYKFFPETWVLPAEMNEFREEFGPKGTSKSIFIIKPDAGCQGKGIFLTKQLS 734
BLAST of mRNA_P-littoralis_Contig855.5.1 vs. uniprot
Match: F0YJJ4_AURAN (Uncharacterized protein (Fragment) n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJJ4_AURAN) HSP 1 Score: 119 bits (298), Expect = 8.610e-26 Identity = 56/102 (54.90%), Postives = 68/102 (66.67%), Query Frame = 1
Query: 1612 LWNVMWHDHGNFEEHLRGLQSFQHYSHLPGLSFFARKAGLAMLMSRMYHEAPKEYKFYPETWVLPAEMADFRAEFGPKGMSKSVFIVKPDSGCQGKGIFLTK 1917
L NV W D N E + L+ +Q +H PG+S ARK LA + +M E PKEY FYP TWVLP E+ADFRA+F G S +IVKPDSGCQG+GIFLT+
Sbjct: 4 LCNVYWIDVANIGERMSKLRPWQRINHFPGMSNIARKNRLAQNLEKMRREFPKEYSFYPRTWVLPLELADFRAQFDSMGRSSRFYIVKPDSGCQGRGIFLTQ 105
BLAST of mRNA_P-littoralis_Contig855.5.1 vs. uniprot
Match: A0A7S3ZQE5_9STRA (Hypothetical protein n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZQE5_9STRA) HSP 1 Score: 119 bits (299), Expect = 2.070e-24 Identity = 63/167 (37.72%), Postives = 87/167 (52.10%), Query Frame = 1
Query: 1417 IVMNTSECEYAVVRECALELDWQLCETKFGPQSDPLTKKPRTDGLVLHTTADASYVCTHRGKCNKLWNVMWHDHGNFEEHLRGLQSFQHYSHLPGLSFFARKAGLAMLMSRMYHEAPKEYKFYPETWVLPAEMADFRAEFGPKGMSKSVFIVKPDSGCQGKGIFLTK 1917
I+ ++C+Y + E A L W++ + Q +T + S +C NV W D N E + L+ +Q +H PG+S ARK LA + +M KEY FYP TWVLP E+ADFRA+F G S +I+KPDSGCQG+GIFLT+
Sbjct: 15 ILFCATDCKYECIIETAQHLGWRIVSGREKDQKKSVTPEN-----------SESEIC----------NVYWIDISNIAERMSKLRPWQRINHFPGMSNIARKNRLAQNLEKMRRGFQKEYNFYPRTWVLPLELADFRAQFDSNGRSSQFYIIKPDSGCQGRGIFLTQ 160
BLAST of mRNA_P-littoralis_Contig855.5.1 vs. uniprot
Match: A0A7S1UJL5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJL5_9STRA) HSP 1 Score: 114 bits (285), Expect = 6.760e-24 Identity = 64/203 (31.53%), Postives = 92/203 (45.32%), Query Frame = 1
Query: 1363 ERQESVDSQVRKPK--------------GPGPIVMNTSECEYAVVRECALELDWQLCETKFGPQSDPLTKKPRTDGLVLHTTADASYVCTHRGKCNKLWNVMWHDHGNFEEHLRGLQSFQHYSHLPGLSFFARKAGLAMLMSRMYHEAPKEYKFYPETWVLPAEMADFRAEFGPKGMSKSVFIVKPDSGCQGKGIFLTKEASE 1929
E VD R+P+ G + N + C+Y VR A W++ +T G D +CN + W D N + ++ L+ +Q +H PG++ ARKA +A + +M P EY FYP+TWVLP E DF+ F G S+ +FI+KPDSGCQG+GIFLT +
Sbjct: 26 EEDSVVDELARRPRSKHKPARRRRRARTGRDECMFNGTLCKYDCVRAGARLRRWRIVDTNNGSHPDE------------------------EDRCN----IYWIDVANIYDRMQRLRPWQRINHFPGMTNIARKARMAQNLEKMRRLFPSEYNFYPKTWVLPTEFGDFKTHFDSHGKSRQIFIIKPDSGCQGRGIFLTSSLDQ 200
BLAST of mRNA_P-littoralis_Contig855.5.1 vs. uniprot
Match: D8LM22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM22_ECTSI) HSP 1 Score: 115 bits (288), Expect = 6.800e-23 Identity = 74/198 (37.37%), Postives = 94/198 (47.47%), Query Frame = 1
Query: 1363 ERQESVDSQV-RKPKGPGPIVMNTSECEYAVVRECALELDWQLCETKFGPQSDPLTKKPRTDGLVLHTTADASYVCTHRGKCNKLWNVMWHDHGNFEEHLRGLQSFQHYSHLPGLSFFARKAGLAMLMSRMYHEAPKEYKFYPETWVLPAEMADFRAEFGPKGMSKSVFIVKPDSGCQGKGIFLTKEASERSDAIIKQ 1953
ERQ S+ + RK ++M ++C+Y VVR A W+L DP R KC+ V W D E ++ L +Q +H PG+S ARK LA + RM P EY FYP TWVLP E F+ EF G S FIVKPDSGCQG+GIFLT++ ER +A Q
Sbjct: 13 ERQGSLSKRSKRKSSRSSQVLMCIADCKYDVVRAAAQAKGWKLVN------EDPEASSSR--------------------KCH----VYWIDVPAIVERMQHLHRWQRINHFPGMSNVARKGRLAQNLDRMRRTFPHEYSFYPRTWVLPVEWGAFKTEFDASGKSTRTFIVKPDSGCQGRGIFLTQDL-ERVEATESQ 179
BLAST of mRNA_P-littoralis_Contig855.5.1 vs. uniprot
Match: A0A7S2L6Q4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L6Q4_9STRA) HSP 1 Score: 112 bits (280), Expect = 5.470e-22 Identity = 60/164 (36.59%), Postives = 84/164 (51.22%), Query Frame = 1
Query: 1438 CEYAVVRECALELDWQLCETKFGPQSDPLTKKPRTDGLVLHTTADASYVCTHRGKCNKLWNVMWHDHGNFEEHLRGLQSFQHYSHLPGLSFFARKAGLAMLMSRMYHEAPKEYKFYPETWVLPAEMADFRAEFGPKGMSKSVFIVKPDSGCQGKGIFLTKEASE 1929
C+Y VVR CA + W+L L + R + NV+W D N ++ G+Q +Q +H PG+S ARK+ LA + M H+ P+++ F P+T+VLP + FR FG G SK FI+KPD GCQGKGIFLT+ S+
Sbjct: 34 CKYEVVRRCAEQKKWKL-----------LQQSQRQNA-----------------------NVIWVDTSNICDYFHGIQPWQTINHFPGMSNIARKSRLAQNLEAMRHQFPRDFSFCPKTYVLPQDTHAFRKNFGTNGKSKRTFIIKPDGGCQGKGIFLTRTLSD 163
BLAST of mRNA_P-littoralis_Contig855.5.1 vs. uniprot
Match: A0A835Z3E5_9STRA (Tubulin-tyrosine ligase/Tubulin polyglutamylase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3E5_9STRA) HSP 1 Score: 108 bits (269), Expect = 6.350e-22 Identity = 51/105 (48.57%), Postives = 65/105 (61.90%), Query Frame = 1
Query: 1618 NVMWHDHGNFEEHLRGLQSFQHYSHLPGLSFFARKAGLAMLMSRMYHEAPKEYKFYPETWVLPAEMADFRAEFGPKGMSKSVFIVKPDSGCQGKGIFLTKEASER 1932
NV W D E LR L +Q +H PG++ ARKA +A + RM P +Y+FYP TWVLP+E R+EF G S IVKPD+GCQGKGI+LT+E +R
Sbjct: 1 NVHWVDVAAIGERLRELAPWQRVNHFPGMAGVARKARMAQALDRMRRAFPLDYRFYPRTWVLPSEACALRSEFDAAGRSARTLIVKPDAGCQGKGIYLTQELDDR 105
BLAST of mRNA_P-littoralis_Contig855.5.1 vs. uniprot
Match: A0A6H5KPS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPS6_9PHAE) HSP 1 Score: 110 bits (274), Expect = 2.480e-21 Identity = 68/177 (38.42%), Postives = 83/177 (46.89%), Query Frame = 1
Query: 1423 MNTSECEYAVVRECALELDWQLCETKFGPQSDPLTKKPRTDGLVLHTTADASYVCTHRGKCNKLWNVMWHDHGNFEEHLRGLQSFQHYSHLPGLSFFARKAGLAMLMSRMYHEAPKEYKFYPETWVLPAEMADFRAEFGPKGMSKSVFIVKPDSGCQGKGIFLTKEASERSDAIIKQ 1953
M ++C+Y VVR A W+L DP R KC+ V W D E ++ L +Q +H PG+S ARK LA + RM P EY FYP TWVLP E F+ EF G S FIVKPDSGCQG+GIFLT+ ER +A Q
Sbjct: 1 MCIADCKYDVVRAAAQAKGWKLVN------EDPEASSTR--------------------KCH----VYWIDVPAIVERMQHLHRWQRINHFPGMSNVARKGRLAQNLDRMRRTFPHEYSFYPRTWVLPVEWGTFKTEFDTSGKSTRTFIVKPDSGCQGRGIFLTQNL-ERVEATESQ 146
BLAST of mRNA_P-littoralis_Contig855.5.1 vs. uniprot
Match: A0A8J5XCG6_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XCG6_DIALT) HSP 1 Score: 105 bits (261), Expect = 8.980e-20 Identity = 60/162 (37.04%), Postives = 80/162 (49.38%), Query Frame = 1
Query: 1432 SECEYAVVRECALELDWQLCETKFGPQSDPLTKKPRTDGLVLHTTADASYVCTHRGKCNKLWNVMWHDHGNFEEHLRGLQSFQHYSHLPGLSFFARKAGLAMLMSRMYHEAPKEYKFYPETWVLPAEMADFRAEFGPKGMSKSVFIVKPDSGCQGKGIFLTK 1917
S C+Y VRE +L W++ P +G V AD S WN+ W D +E + L+ Q +H PG+ ARKAG A ++RM P EYK +P TW+LPA++ DF+A+F K FIVKP GCQGK I LT+
Sbjct: 74 SACKYEAVREAMEQLGWEILA-------------PADEGEV----ADDS------------WNIYWTDVSVSQERVTRLRPLQRINHFPGMLELARKAGTARNLNRMLERYPNEYKIFPPTWLLPADLTDFKAQFTAK--RNKTFIVKPSRGCQGKDIMLTR 204 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig855.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig855.5.1 >prot_P-littoralis_Contig855.5.1 ID=prot_P-littoralis_Contig855.5.1|Name=mRNA_P-littoralis_Contig855.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=652bp DGRDSRDETKPADNRAPPPEESIGSKRITNVSSEKRRRASREHSREALLDback to top mRNA from alignment at P-littoralis_Contig855:10632..22702+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig855.5.1 ID=mRNA_P-littoralis_Contig855.5.1|Name=mRNA_P-littoralis_Contig855.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=12071bp|location=Sequence derived from alignment at P-littoralis_Contig855:10632..22702+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig855:10632..22702+ >mRNA_P-littoralis_Contig855.5.1 ID=mRNA_P-littoralis_Contig855.5.1|Name=mRNA_P-littoralis_Contig855.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1956bp|location=Sequence derived from alignment at P-littoralis_Contig855:10632..22702+ (Pylaiella littoralis U1_48)back to top |