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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 719 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 717 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791722.0105402-CDS-P-littoralis_Contig852:91846..92289 | 1680791722.0105402-CDS-P-littoralis_Contig852:91846..92289 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig852 91847..92289 - |
| 1680791722.0231998-CDS-P-littoralis_Contig852:95837..96111 | 1680791722.0231998-CDS-P-littoralis_Contig852:95837..96111 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig852 95838..96111 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig852.27.1 >prot_P-littoralis_Contig852.27.1 ID=prot_P-littoralis_Contig852.27.1|Name=mRNA_P-littoralis_Contig852.27.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=239bp
QQTHNHIRPRRGKEMASLQQLLSGASDDTASDGEVWVGDDTPIPLQSNYD
AVDAEHNDAELDTQQEQQQQQQQEQQQWQQGEDTQQEDNTQLDVAIRMAT
DLNLLDARKVLSDTVARGNRMVAACNDPVLVLGVFSKMLPSVHGVSQEVY
EADCADLRKVTALSRNFFTNPGGAGGGSGSGGGSSSGKARGSGRKHAATQ
PSIAGTLHGNAFPTAPSGAAANRARSSGTGGHAQGHYGP back to topmRNA from alignment at P-littoralis_Contig852:91845..96111- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig852.27.1 ID=mRNA_P-littoralis_Contig852.27.1|Name=mRNA_P-littoralis_Contig852.27.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4267bp|location=Sequence derived from alignment at P-littoralis_Contig852:91845..96111- (Pylaiella littoralis U1_48)
CAGCAGACACACAACCATATACGCCCGAGGCGCGGCAAAGAGATGGCCTC
GTTGCAGCAACTGCTGAGCGGGGCTAGCGATGACACTGCCAGTGATGGGG
AGGTATGGGTAGGAGACGACACTCCCATCCCACTCCAAAGCAACTATGAT
GCTGTGGACGCTGAACACAACGACGCTGAGCTTGACACGCAGCAGGAGCA
GCAGCAGCAGCAGCAGCAAGAGCAGCAGCAGTGGCAGCAGGGCGAGGACA
CGCAGCAGGAAGACAACACGCAGCAGGTAGCGAGATAGATGGGGTGAAAG
TAAATTAATTCGTGTAAAGCAGGTAGAGTACAGCAGCAGGTAAAGTTAAC
CCTTCTGGGGCCAGGGTATTTCGGCGGGGCAACCCAAATAGCCCGGGTCC
TAAAAAAAACTAAACAAGCCAGTATTTCACCACCCGAGAACCAGACACAA
AAAAAGCCAGCTCTTGGCTCCGCGTGCACAAATCATGAGATAATCTGAGC
CCGAAAAAGGGGGGACGTTCGAAGAGCGTCCCGAGTTTACCATGTCAATC
GCGGCTGTCGCAGCGGGCGCCAGCGCTCTGGACGCCAACCGGACCTTAGC
GTCCCTCAAATGCACAAAGCCCGGCCTCCAAGGAGGTCCCAACGTCGTTG
ATTTGGCAAAGGTCATCCGTCCAGACGGAGCGACGTTCTCGAGCCTCTCC
TGCTCGAAGTCACGGAGGTCATCGCTCCGATCGTGGAGGGCCGCGGCAAC
GCATCCGGCGTGTCCGTGTTCGCAGCGATGGCAGCTGCAGTGACCGAGGC
GGACTCCTCCCTCGGCACGGCGGCCTACAAGGCGGCGGCGGGGCCGCGCT
CCATGCTCCTGTGGGGACTCGAAGCTTTGCGCGGCACGCTCCACGAGAAA
GGAGCGAAGGTGTTTCTGCCGGGTCCCCCGGCGCCAGCCGTCGCCGCGCC
TGGCTCTTCCGCGCCAGTAGCGGCCGCGCCCGGCGCCGACGCGTCTCCCG
TCGCTGCCGCGGCTGAACAGCAGGGCCCCCCGTCATCGCCAGCAGTACCA
GCGGAGGCGCAGGGGGGGCATCAGCTGAGGCAGCTGCCCAGCCGGTCGGG
CGCGCTAACCTGCCGGCGACCGCCAACAGGCCAGGGGACGACCAGGAGGA
CGAGGTGGTCACGACCAGGGTAGTAGCGCCTACCCAGGCGCAGCGGGCTT
CGGCGGTGGACGTCATCCAACGCGCGGAGAACCAAAAGCTAGTGGGCTTG
ATCCAGGACTCCCACATATCTCGCGAGGTGAATTTCAGGTGCTTGCATTT
TATCTCCATCCACCGCTGCGCATTTGTTCGGGATTCCGCCTTGAATCTAT
CGGGATATAATAGGTTCCAGGTATTCTCTGTCACCTTTCTGCTTTCCATC
GTTCTCGGATGCCAGCAATATTTTGGTTCGGAGTAATGCGGTACTGGAAA
AGAGGGATCGGTTTCTGTACTCTTATCATAAATGCTGTTTCACCGACTGC
CTGTACAGTACGGCAGTACCGGCTACACCGCCGTGCTTATATTGATATGG
TACGTTACTGCCATGAGCAGTTGCGTCGTATACTCCGGAACTGCTGTTAC
TGACATCAGGGGTGGATTCGTACACTCAAATTGAGTATTGAGTATGCTAC
TGCGATACTGCTGTAGACCGAGCCGCCATACGATTGTACAAACGTCCCTG
CCTGCTGTAACCACGCTGCGGTACCGGGTCAGTCCGCATTGCGTATCGGA
CGACCCTCTATTGACGAATACCTGGTAGTGATGATGCGTGCTATTTACGA
CCGACCGGGTTCGATCCCATTAAATACCTAAGTATACGGCGGGGTTCGTT
TCCATCACTTACGGAAGGATGCTTTATTCTATTTCATTTTATTTTCGGTT
CTATCATACCTCAAATGCTGTCATGTACGATACCGACATTAGGAATACTC
CGGAACCGGGTAATGAGTAGGCTGCTGCTGTACCCAGACACCCTGACGAC
TGTTGTTGACACTTCATTTTATTTTGTTCCACCTCACTGTGTACGATACT
GCTGATGATACTCGATCCTTATTTTCCATTCTACCTCATTCTGTACGATA
CTGACATCAGTGGTTGGTTGCTTCGTATGCTCCGGAACCGGAAATGAGTA
GGTAGGCTACTGCTGTACACACACACCATAACCATGCTGCGGTAGACCGA
GCCGCAATACTGTACAACCGCCCAGGCCCGCGGTAACCAGGCCGCGGTAC
CGGGAACCACCGTACGGCGTATATTAGGTTCCGTTATGGACAAATAGTTA
TTACACATGTACGTCTGGGTTCGATCCCCTACACCTTTAAAACTACGGCG
GGGGGGAGCTCGATGCCCCCACTTACGGAGGGCACTTTAGGTTTAATTTT
TATTTTTCTATGTTTCTATTTTGACAAATATGTTCGAACGGGTTCGATCC
CCTAATTTACGGACGGGTTCGATCCCCACTACACGATTTGGGTTCGATCC
CCCCGAGCACGAACGAGTTCGACCCCCTACGAACAGGTTCGATCTCCCCT
ACGCAATTGGGTTTGATCTCCTCGGATACGAACGGGTTCGACCCCACCTA
ATTTTCGGACAGGTTCGATCCCCATTACGCAATTGGGTTCGATCCCCTCG
TATCCGAACGGGTTCGACCCCCTGGTTTGGTTTGGTCCTAATTTTTGGAC
AGGCTTGATCCCCACTACGCAATTGGGTTCGATCCCCTCGTATCCAACAG
GTTCGACCCCCTGGTTTTCGGACGGGTTCGATCCCCACTACGCAATCGGG
TTCGATCCCCTCATAAACTTTTAGGGACGGGTTCGATCCCCACTGGTTTT
CGGACGGGTTCGATCCCCACTACGCAATCGGGTTCGATACCCTCATACGA
TCCCCACTTTTTCGGACGGGTTCGATCCCCACTACGCAATTGGGTTCGAT
CCCCTCATATACTTTTACGGACGGGTTCGATCCCCACTGGTTTTCGGACG
GGTTCGATCCCCACTACGCAATCGGGTTCGATCCCCTCATGTACTTTTAC
GGACGGGTTCGATCCCCACTGGTTTTCGGACGGGTTCGATCCCCACTACG
CAATCGGGTTCGATCCCCTCATACTCTTTTACGGACGGGTTCGATCCCCA
CTAAACGCGTGGGTTCGATCTCCTACTACTGTACGAACGGGTTCGATCCC
CTTGCGGTACGATCGGGTTCGATCCCCTCATATACCTTTACGGACGGATT
CGATCCCCACTTAACGCGTGGGTTCGATCCCCTACTGCTGTACGAACGGG
TTCGATCCCCTTGCGGTACGATTGGGTTCGATCCCCTGTGTGGCACGGTT
CGACCCCGTGGGACTTTTGCCGGCAAATCAGGAATGTTATCTTTGCTTTG
TCTTTCCGATCCCCGTGGGGCTCTGCAGGAAAAATCAGGAATCTTGTTTA
TTTTATTCTCTTTTATTTTTCTTTCGCGGCTGTGGTACGGTTCGATCCCC
TTGCGAGTTTCTGCGTGAAGTTCCCCGAGCGCGCTATGCGACGTGGGGCT
CTGCAGGAAAAATCAGGAATCTTGTTCTGTTTTATTCTATTTCATTTTCT
TTCGTGGCTGTGGTACAGTTCGATCCCCTTGCGAGTTTCTGCGTGAAGTT
CTCCGAGCGCGCCATGCGACGAACGAGTTTCATATTAACGTGGCCGACCG
ATTTCTTTGCTTTCATTTCCGACGGTGCGATCGATTGCAGTTGCGACTCA
AGCTCGACGGCGTTCTCGACGTCATGCGCGACGCGGACGGTCGCTATACG
TGGTTCACCATGCGCACTCACCTGGACGTAGCCATTCGGATGGCAACGGA
TTTGAACCTCCTCGACGCGAGGAAGGTGCTGAGCGACACAGTCGCGCGGG
GCAATCGTATGGTGGCGGCGTGTAACGATCCGGTTCTCGTCCTTGGCGTC
TTCTCCAAGATGCTGCCGTCGGTCCACGGCGTCTCGCAAGAGGTATACGA
GGCGGACTGCGCGGACCTGCGGAAGGTCACCGCGCTTTCCCGCAACTTCT
TCACCAACCCTGGCGGGGCGGGGGGAGGAAGCGGCAGCGGTGGCGGGAGC
AGCTCGGGAAAAGCTCGCGGCTCAGGCCGCAAACACGCAGCTACGCAGCC
GTCCATCGCGGGCACGCTACACGGGAACGCGTTTCCCACGGCGCCATCCG
GAGCGGCGGCGAACCGGGCACGCTCATCGGGTACAGGGGGACACGCGCAA
GGTCATTACGGCCCGGT back to topCoding sequence (CDS) from alignment at P-littoralis_Contig852:91845..96111- >mRNA_P-littoralis_Contig852.27.1 ID=mRNA_P-littoralis_Contig852.27.1|Name=mRNA_P-littoralis_Contig852.27.1|organism=Pylaiella littoralis U1_48|type=CDS|length=717bp|location=Sequence derived from alignment at P-littoralis_Contig852:91845..96111- (Pylaiella littoralis U1_48)
CAGCAGACACACAACCATATACGCCCGAGGCGCGGCAAAGAGATGGCCTC
GTTGCAGCAACTGCTGAGCGGGGCTAGCGATGACACTGCCAGTGATGGGG
AGGTATGGGTAGGAGACGACACTCCCATCCCACTCCAAAGCAACTATGAT
GCTGTGGACGCTGAACACAACGACGCTGAGCTTGACACGCAGCAGGAGCA
GCAGCAGCAGCAGCAGCAAGAGCAGCAGCAGTGGCAGCAGGGCGAGGACA
CGCAGCAGGAAGACAACACGCAGCTGGACGTAGCCATTCGGATGGCAACG
GATTTGAACCTCCTCGACGCGAGGAAGGTGCTGAGCGACACAGTCGCGCG
GGGCAATCGTATGGTGGCGGCGTGTAACGATCCGGTTCTCGTCCTTGGCG
TCTTCTCCAAGATGCTGCCGTCGGTCCACGGCGTCTCGCAAGAGGTATAC
GAGGCGGACTGCGCGGACCTGCGGAAGGTCACCGCGCTTTCCCGCAACTT
CTTCACCAACCCTGGCGGGGCGGGGGGAGGAAGCGGCAGCGGTGGCGGGA
GCAGCTCGGGAAAAGCTCGCGGCTCAGGCCGCAAACACGCAGCTACGCAG
CCGTCCATCGCGGGCACGCTACACGGGAACGCGTTTCCCACGGCGCCATC
CGGAGCGGCGGCGAACCGGGCACGCTCATCGGGTACAGGGGGACACGCGC
AAGGTCATTACGGCCCG back to top
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