prot_P-littoralis_Contig84.50.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig84.50.1
Unique Nameprot_P-littoralis_Contig84.50.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length372
Homology
BLAST of mRNA_P-littoralis_Contig84.50.1 vs. uniprot
Match: Q8QN92_ESV1K (EsV-1-197 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN92_ESV1K)

HSP 1 Score: 179 bits (454), Expect = 1.800e-48
Identity = 145/403 (35.98%), Postives = 203/403 (50.37%), Query Frame = 0
Query:    1 MNVIGGHPNSGLDWYRLLSIYSTLGSSKSNSRVKTSELEKELEALKSLNGDVVKAMQGISTKLDSLIQAGNSKLSGDDLTELKRSVVDGLKDHVAANPRQCADPVACDGESILFTDDVKEVLASLVAQKARVLQEADL---PQMARDIGSIGTKLG--SEATLAEAGRRQMYTWMDTIDEKQESLSEAIKES------TKIVDGESVLFTDDVKQVLAGLVQQKAVAMRHDGIPSIAREIGDIKTQLAGGIPMTEADA-----KELGLRLTEADRKALADAAVAKLVTTGDPSTDXXXXXXXXXXXXXXTTASVL---------------GDKDWLYRLPLRAVRDLFVLKSDDLYLASDNIIEEACSYSQAVRALRETSTLYNTDDVVTVDEVNAAIADRYR 372
            M+V G  P  G++WYRLLSIYS LG  KSNS  K  ++  EL+   S   DV  A+Q I+TKLD LI A   +LSGDDLT LK  +V GLKDHV ++ ++CA PV C+GES+ FTDDVKE+L+ LV QK+  L         Q  + +G I   LG  S  T ++A + Q+    DTI   Q  L+   KE+      +K+ + ES  FTDDV +VLA LV+QKA A++ DG      E   I T L   I  T + A     K      T+++ + L  + + K+ +   P                      L                DK  LY++    +R +FV K+DDL L S    +EA  YS+ +    +    YN D V+T  ++ + +  RY+
Sbjct:    1 MDVHGTRP-LGVNWYRLLSIYSDLGK-KSNSHEKICDIGTELQ---SFRADVGTAIQSINTKLDDLINANKIELSGDDLTRLKDDIVSGLKDHVQSSGQECAAPVVCNGESVFFTDDVKELLSDLVRQKSGSLSPGGNGRDEQNYKALGRIEECLGDLSNKTDSDAIKTQLQALQDTIS-NQAGLTAQDKETIAREIASKVCEDESFRFTDDVNEVLASLVEQKAEALKPDG------ETKRIATALIAYIEKTLSGAITGAGKRFDSVATKSELEGLRKSIIQKMHSMSSPVDAPDSATITLDDASVQRIVDTLLTQNREEDANIEPWEPDKPDLYKIDTENIRQMFVEKNDDLMLQSAEYEDEALRYSRYIVVAGDE---YNKDSVITKKQIVSDLNQRYK 388          
BLAST of mRNA_P-littoralis_Contig84.50.1 vs. uniprot
Match: A0A6H5KC66_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC66_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 3.460e-7
Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 0
Query:  111 SILFTDDVKEVLASLVAQKARVLQEADLPQMARDIGSIGTKLGSEATLAEAGRRQMYTWMDTIDEKQESL 180
            S+LFT DVK +LASLV QKA VL+E +L +MA+ I SI TKLG +A   +  R     WM  + EKQ+++
Sbjct:  268 SVLFTPDVKAILASLVEQKAAVLREVNLQKMAQGIVSIDTKLGVDAAKIDDERDLDADWMKGLVEKQDAI 337          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig84.50.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Q8QN92_ESV1K1.800e-4835.98EsV-1-197 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
A0A6H5KC66_9PHAE3.460e-750.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig84contigP-littoralis_Contig84:358355..359587 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig84.50.1mRNA_P-littoralis_Contig84.50.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig84 358355..359587 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig84.50.1 ID=prot_P-littoralis_Contig84.50.1|Name=mRNA_P-littoralis_Contig84.50.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=372bp
MNVIGGHPNSGLDWYRLLSIYSTLGSSKSNSRVKTSELEKELEALKSLNG
DVVKAMQGISTKLDSLIQAGNSKLSGDDLTELKRSVVDGLKDHVAANPRQ
CADPVACDGESILFTDDVKEVLASLVAQKARVLQEADLPQMARDIGSIGT
KLGSEATLAEAGRRQMYTWMDTIDEKQESLSEAIKESTKIVDGESVLFTD
DVKQVLAGLVQQKAVAMRHDGIPSIAREIGDIKTQLAGGIPMTEADAKEL
GLRLTEADRKALADAAVAKLVTTGDPSTDAFKAALANAAVARMTTASVLG
DKDWLYRLPLRAVRDLFVLKSDDLYLASDNIIEEACSYSQAVRALRETST
LYNTDDVVTVDEVNAAIADRYR
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