prot_P-littoralis_Contig84.39.9 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig84.39.9
Unique Nameprot_P-littoralis_Contig84.39.9
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1176
Homology
BLAST of mRNA_P-littoralis_Contig84.39.9 vs. uniprot
Match: A0A6H5J9W3_9PHAE (UBC core domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9W3_9PHAE)

HSP 1 Score: 859 bits (2219), Expect = 4.840e-292
Identity = 639/1098 (58.20%), Postives = 697/1098 (63.48%), Query Frame = 0
Query:    3 ETLKERLLRSDFDRVRQHAEYQDADVQSKDGSIFVWTLSVPGGKGTSWEGLVYDLEITFSRRHPFEPPRVDFPRTPRNLSNPGHPLVDGSGRLRMQKLSFDKWLPTIEASQVIGWLFHLFETEPPSVTSGNRCPFTHLSSETVLQVHTFLDAGDLGRLSQTSKHMLSLCFDEATWAKLYFRSSSSLDGLLGEKEGGACPVRVMGVSGKWFWEGSREAFIRRSWEMKNACCPFSFATAKTQELHVEWELGGLMTVAAGLLLDMEGRREHALHELGNSAHLDHMERILDSQTMRIASLQRLMAWPGVCRGLLSEKEEDSSLPIGLWDQPGHGPFSARSPSSRPSDRSYSSSSSSPS-------AKVACGELSARETRLSPEQREALGLLLGNLATRPAVTTRHRWRXXXXXXXXXXXXXXXXXXAPLSAS-------------AATNPPETPLERFPHHHHTVAGPAVPFDMGSVELPPRGGRGGRGYRFSPAAGGGGXXXXXXXXXXXXXXXXANVACNNGARVAAARAAAGAGGATARARRAGVAHGSTGRALAVCSRCHEGGATLQNAQPACSMGGVCWPTLYDLTSAKRRQRERLRDYFRKFSRGQKLDVRDPSGVWMGAEVLWVSSRSGSHV-----WGHALGN-----------PGAAXXXXXXXXXXXXXXXXXXXXXXXXXXFGGNGHQHQVLAGADEDPTEWRRLLQLAFLADGGPLGMHANNAGAGAXXXXXXXXXXXXXXXXXXXXXXDSSSSIGLSSNGGD-----------------WVTTGAVDAAQSFLASAVASAAEDSPWPRLSSRWPRSAPSPPXXXXXXXPLMHDIAALAAXXXXXXXXXXXXXXXXXXADAPHGGAVEGAQAALGEAGXXXXXXXXXXXXXXXXXXXXXXXXXGPAVLGFTHGDA-PARSTSGSVLIHYEGHKSKYDEYINVQSPRLAPFRSRTTRPLSVTIQSVEKVVNGASVSCSRGVPAPDCVEVSVSCPWISHCAGGGVVTYRLPRSTTLGAVLADFCHLAGISLWRATIQRAKLHLASDICCGSCAAEELDDRRTLEYHKVTSGSVLLVCVAPSAKDLSPAGPSC 1046
            E LKE+LLR DFD VRQH +YQ A+V++++GSI  W L VPGGKGTSWEGLVYDL++TFSRRHPFEPPRVDFPRT RN+SNPGHPLVD +G LRMQKLS DKWLPTIEASQVI WLFHLFETEPP VTSGN CPFTHLSSETVLQVH FLDAGDLGRLSQTSKHMLSLCFDEATWAKLY+RS +SLDGLLGEKEGGACPVRVMG SGKWFWEGSREAFIR SWEM+ AC   +F+TAKTQELHV+WEL GL+TVAAGLL D++ RR        N+ +L HMER+LDS TMR+ASLQRLMAWPGVCRGLLSEK+ED SLPI  W +PG      RSPS  P         ++ +             + S RE RL+PEQREA+ LL GNLA  P    R    XXXXXXXXXXXXXXXXXX                   AAT    TP E FP+HHHTVAGP +P+ MG VELP R   GG   +   A     XXXXXXXXXXXXXXXX                                                 G ATLQNAQPAC MGG+ WPTLYDLT+AKRRQRERLR+ FRKFSRGQ+LDV DPSGVWMGAEV+W     G        WG   G            P A    XXXXXXXXXXXXXXXXX       GGNG              EWRR+LQL  +AD G    H N      XXXXXXXXXXXXXXXXXXXXXX                               WVTT A  A+QS                 L            XXXXXXX        + A                     P  GA            XXXXXXXXXXXXXXXXXXXXXXXXX    L F  G   P  S    V +HYEGHK KYDE+I+VQS RLAPFRSRTTRPLSVT+Q VE+VV GASVS SRGVPAPDCVE+ +SCPW+SHCAGGGVVTYRLPRST L  VLADFCHLA ISL RAT++RA+L LASD   G C  EELDD RTLEY  VTSGSVLLVCVAP+ KDL+PAG  C
Sbjct:  105 EALKEQLLRDDFDEVRQHPKYQTANVRTEEGSILKWILDVPGGKGTSWEGLVYDLKVTFSRRHPFEPPRVDFPRTHRNVSNPGHPLVDANGCLRMQKLSPDKWLPTIEASQVISWLFHLFETEPPCVTSGNSCPFTHLSSETVLQVHAFLDAGDLGRLSQTSKHMLSLCFDEATWAKLYYRSCTSLDGLLGEKEGGACPVRVMGASGKWFWEGSREAFIR-SWEMRKACSSAAFSTAKTQELHVKWELSGLLTVAAGLLYDIQDRRLGDAFPAANAGYLRHMERVLDSLTMRVASLQRLMAWPGVCRGLLSEKDEDRSLPIDAWGRPGQ---QRRSPSPSPXXHEKHHRCNAGADXXXXXXXXXXXXDSSGREARLTPEQREAMRLLFGNLAALPVARRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATA--RTPPEGFPYHHHTVAGPCIPYGMGRVELPAR--VGGEPPQVLAAXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------------SGCATLQNAQPACGMGGLFWPTLYDLTAAKRRQRERLRECFRKFSRGQRLDVLDPSGVWMGAEVMWAPGDGGVGTLRVGGWGEDGGAXXXXXXXXXXAPAAEVAGXXXXXXXXXXXXXXXXXPLAGYPVGGNGGM-----------PEWRRVLQLGLMADSGQAAPHPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWVTTEAPKASQS-----------------LXXXXXXXXXXXXXXXXXXXXXXXXXXPVLANWN------------------PGAGAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVFGQGGTTPPGSNRKLVRVHYEGHKKKYDEWISVQSGRLAPFRSRTTRPLSVTMQFVEQVVKGASVSSSRGVPAPDCVEIFMSCPWVSHCAGGGVVTYRLPRSTKLCGVLADFCHLADISLRRATVKRARLFLASDFRDGCCDGEELDDHRTLEYLNVTSGSVLLVCVAPTVKDLAPAGSLC 1103          
BLAST of mRNA_P-littoralis_Contig84.39.9 vs. uniprot
Match: D7FVT1_ECTSI (Ubiquitin-conjugating enzyme E2W n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVT1_ECTSI)

HSP 1 Score: 633 bits (1633), Expect = 7.400e-211
Identity = 464/938 (49.47%), Postives = 511/938 (54.48%), Query Frame = 0
Query:    3 ETLKERLLRSDFDRVRQHAEYQDADVQSKDGSIFVWTLSVPGGKGTSWEGLVYDLEITFSRRHPFEPPRVDFPRTPRNLSNPGHPLVDGSGRLRMQKLSFDKWLPTIEASQVIGWLFHLFETEPPSVTSGNRCPFTHLSSETVLQVHTFLDAGDLGRLSQTSKHMLSLCFDEATWAKLYFRSSSSLDGLLGEKEGGACPVRVMGVSGKWFWEGSREAFIRRSWEMKNACCPFSFATAKTQELHVEWELGGLMTVAAGLLLDMEGRREHALHELGNSAHLDHMERILDSQTMRIASLQRLMAWPGVCRGLLSEKEEDSSLPIGLWDQPGHGPFSARSPSSRPSDRSYSSSSSSPSAKVACGELSARETRLSPEQREALGLLLGNLATRPAVTTRHRWRXXXXXXXXXXXXXXXXXXAPLSASAATNPPETPLERFPHHHHTVAGPAVPFDMGSVELPPRGGRGGRGYRFSPAAGGGGXXXXXXXXXXXXXXXXANVACNNGARVAAARAAAGAGGATARARRAGVAHGSTGRALAVCSRCHEGGATLQNAQPACSMGGVCWPTLYDLTSAKRRQRERLRDYFRKFSRGQKLDVRDPSGVWMGAEVLWVSSRSG-SHVWGHALGNPGAAXXXXXXXXXXXXXXXXXXXXXXXXXX----FGGNGHQHQVLAGADEDPTEWRRLLQLAFLADGGPLGMHANNAGAGAXXXXXXXXXXXXXXXXXXXXXXDSSSSIGLSSNGGDWVTTGAVDAAQSFLASAVASAAEDSPWPRLSSRWPRSAPSPPXXXXXXXPLMHDIAALAAXXXXXXXXXXXXXXXXXXADAPHGGAVEGAQAALGEAGXXXXXXXXXXXXXXXXXXXXXXXXXGPAVLGFTHGDAPARSTSGSVLIHYEGHKSKYDEYINVQSPRLAPFRSRTTRPLSVTIQSVEKVVNGASVS-CSR 934
            E LKE+LLRSDFD+VRQH +YQ A+V++++GSIF W L VPGGKGTSWEGLVYDLE+TFSRRHPFEPPRVDFPRT RN+SNPGHPLVD +GRLRMQKLSFDKWLPTIEASQVIGWLFHLFETEPP VTSGN CPFTHLSSETVLQVHTFLDAGDLGRLSQTSKHMLSLCFDEATWAKLY+RS +SLDGLLGEKEGGACPVRVMG SGKWFWEGSREAFIR SWEM+ AC   +F+TAKTQELHV+WEL GL+TVAAGLL D++ RR   +    N+ +L HMER+LDS TMR+ASLQRLMAWPGVCRGLLSEK+ED SLPI +W +PG      RSPS                                                      +HR                      L A     PP+                                                                                                                 G ATLQNAQPAC MGG+ WPTLYDL +AKRRQRERLR+ FRKFSRGQKLDVRDPSGVWMGAEV+W     G   +     G  G AXXXXXXXXXXXXXXXXXXXXXXXXXX    F G+        G D    EWRRLLQL  +ADGG                                                                     A   SP P L++  P +                  A LAA                     P G              XXXXXXXXXXXXXXXXXXXXXXXXX  A++    G  P  S    V +HYEGHK KYDE+I+VQS RLAPFRSRTTRPLSVT+Q VE+VVNGASVS C R
Sbjct:    2 EALKEKLLRSDFDQVRQHPKYQTANVRTEEGSIFKWILDVPGGKGTSWEGLVYDLEVTFSRRHPFEPPRVDFPRTHRNVSNPGHPLVDANGRLRMQKLSFDKWLPTIEASQVIGWLFHLFETEPPCVTSGNSCPFTHLSSETVLQVHTFLDAGDLGRLSQTSKHMLSLCFDEATWAKLYYRSCTSLDGLLGEKEGGACPVRVMGASGKWFWEGSREAFIR-SWEMRKACSSAAFSTAKTQELHVKWELSGLLTVAAGLLHDIQNRRLGDVFPAANAGYLRHMERVLDSLTMRVASLQRLMAWPGVCRGLLSEKDEDGSLPIDVWGRPGQ---QRRSPSXXXXXHEK----------------------------------------------QHR--------------------VELPARVGGEPPQVLAXXXXXXXXXXXXXXXXXXXXXXXX------------------------------------------------------------------------------------XSGWATLQNAQPACGMGGLFWPTLYDLMAAKRRQRERLRECFRKFSRGQKLDVRDPSGVWMGAEVMWAPGDGGVGTLRADGCGEDGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFAGSP------VGGDAGMPEWRRLLQLGLMADGGR--------------------------------------------------------------------ALPGSPPPALANWNPGAG-----------------ATLAA--------------------VPAGXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXALVFGQGGTTPPGSNRKLVRVHYEGHKKKYDEWISVQSGRLAPFRSRTTRPLSVTMQFVEQVVNGASVSRCQR 670          
BLAST of mRNA_P-littoralis_Contig84.39.9 vs. uniprot
Match: A0A4D9A0D3_SALSN (Ubiquitin-conjugating enzyme E2 C n=5 Tax=Salvia TaxID=21880 RepID=A0A4D9A0D3_SALSN)

HSP 1 Score: 58.2 bits (139), Expect = 1.370e-5
Identity = 31/82 (37.80%), Postives = 44/82 (53.66%), Query Frame = 0
Query:   34 SIFVWTLSVPGGKGTSWEGLVYDLEITFSRRHPFEPPRVDFPRTPRNLSNPGHPLVDGSGRLRMQKLSFDKWLPTIEASQVI 115
            SIF WT ++ GGKGT ++GL Y L + F   +PF+PP+V F  T        HP VD  G + +  L  DKW    +   ++
Sbjct:   91 SIFAWTGTIEGGKGTMYDGLSYKLSLRFPVDYPFKPPQVKFETTC------FHPNVDQFGNICLDILQ-DKWSSAYDCRTIL 165          
BLAST of mRNA_P-littoralis_Contig84.39.9 vs. uniprot
Match: A0A4Y7QJM4_9AGAM (Ubiquitin-conjugating enzyme 9 n=1 Tax=Rickenella mellea TaxID=50990 RepID=A0A4Y7QJM4_9AGAM)

HSP 1 Score: 56.2 bits (134), Expect = 2.370e-5
Identity = 33/91 (36.26%), Postives = 49/91 (53.85%), Query Frame = 0
Query:   28 VQSKDGS--IFVWTLSVPGGKGTSWEGLVYDLEITFSRRHPFEPPRVDFPRTPRNLSNPGHPLVDGSGRLRMQKLSFDK-WLPTIEASQVI 115
             ++ DGS  +  W + +PG  GTSWEG V+ L +TF   +P +PP+  F  TP       HP V  SG + +  L  +K W P+I   Q++
Sbjct:   29 AKAADGSMNLMEWEVGIPGKAGTSWEGGVFKLNMTFPEDYPTKPPKCKF--TPALF----HPNVYPSGTVCLSILDEEKSWKPSITIKQIL 113          
BLAST of mRNA_P-littoralis_Contig84.39.9 vs. uniprot
Match: A0A1S4BGE0_TOBAC (SUMO-conjugating enzyme SCE1-like n=3 Tax=Nicotiana TaxID=4085 RepID=A0A1S4BGE0_TOBAC)

HSP 1 Score: 54.7 bits (130), Expect = 8.400e-5
Identity = 34/107 (31.78%), Postives = 54/107 (50.47%), Query Frame = 0
Query:   32 DGSI--FVWTLSVPGGKGTSWEGLVYDLEITFSRRHPFEPPRVDFPRTPRNLSNPGHPLVDGSGRLRMQKLSFDK-WLPTIEASQVIGWLFHLFETEPPSVTSGNRC 135
            DGS+   VW  ++PG +GT WEG  Y L + FS  +P +PP   FP+   +++      V GSG + +  L+ +  W P I   Q++  +  L +   PS  +   C
Sbjct:   34 DGSVNLMVWHCTIPGKRGTDWEGGHYPLTMHFSEDYPSQPPLCKFPQGFFHIN------VYGSGDVCLSILNPNNGWSPAITVKQILVGIQELLDEPNPSSAAQFDC 134          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig84.39.9 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5J9W3_9PHAE4.840e-29258.20UBC core domain-containing protein n=1 Tax=Ectocar... [more]
D7FVT1_ECTSI7.400e-21149.47Ubiquitin-conjugating enzyme E2W n=1 Tax=Ectocarpu... [more]
A0A4D9A0D3_SALSN1.370e-537.80Ubiquitin-conjugating enzyme E2 C n=5 Tax=Salvia T... [more]
A0A4Y7QJM4_9AGAM2.370e-536.26Ubiquitin-conjugating enzyme 9 n=1 Tax=Rickenella ... [more]
A0A1S4BGE0_TOBAC8.400e-531.78SUMO-conjugating enzyme SCE1-like n=3 Tax=Nicotian... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 8..150
e-value: 0.0045
score: 7.5
NoneNo IPR availableGENE3D1.20.1280.50coord: 133..229
e-value: 1.2E-6
score: 30.4
NoneNo IPR availableGENE3D2.30.30.140coord: 872..910
e-value: 8.3E-6
score: 27.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 766..791
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1132..1155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 322..372
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1042..1114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 393..445
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 334..359
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 772..789
NoneNo IPR availablePANTHERPTHR31535FAMILY NOT NAMEDcoord: 797..1143
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 2..132
e-value: 6.5E-14
score: 53.9
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 25..128
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 22..124
e-value: 1.4E-13
score: 50.7
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 5..160
score: 13.25857
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 130..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig84contigP-littoralis_Contig84:265680..285154 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig84.39.9mRNA_P-littoralis_Contig84.39.9Pylaiella littoralis U1_48mRNAP-littoralis_Contig84 262731..285231 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig84.39.9 ID=prot_P-littoralis_Contig84.39.9|Name=mRNA_P-littoralis_Contig84.39.9|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1176bp
MSETLKERLLRSDFDRVRQHAEYQDADVQSKDGSIFVWTLSVPGGKGTSW
EGLVYDLEITFSRRHPFEPPRVDFPRTPRNLSNPGHPLVDGSGRLRMQKL
SFDKWLPTIEASQVIGWLFHLFETEPPSVTSGNRCPFTHLSSETVLQVHT
FLDAGDLGRLSQTSKHMLSLCFDEATWAKLYFRSSSSLDGLLGEKEGGAC
PVRVMGVSGKWFWEGSREAFIRRSWEMKNACCPFSFATAKTQELHVEWEL
GGLMTVAAGLLLDMEGRREHALHELGNSAHLDHMERILDSQTMRIASLQR
LMAWPGVCRGLLSEKEEDSSLPIGLWDQPGHGPFSARSPSSRPSDRSYSS
SSSSPSAKVACGELSARETRLSPEQREALGLLLGNLATRPAVTTRHRWRR
RRRRADSRVGGAAASAGAPLSASAATNPPETPLERFPHHHHTVAGPAVPF
DMGSVELPPRGGRGGRGYRFSPAAGGGGGGGGAGGGRGAGAGIGANVACN
NGARVAAARAAAGAGGATARARRAGVAHGSTGRALAVCSRCHEGGATLQN
AQPACSMGGVCWPTLYDLTSAKRRQRERLRDYFRKFSRGQKLDVRDPSGV
WMGAEVLWVSSRSGSHVWGHALGNPGAAAAAAAAAGGVGGGGGGGGGGGG
GGGAFGGNGHQHQVLAGADEDPTEWRRLLQLAFLADGGPLGMHANNAGAG
AAGAAGAAGGGGNNIGNGGGGGADSSSSIGLSSNGGDWVTTGAVDAAQSF
LASAVASAAEDSPWPRLSSRWPRSAPSPPSPPPSPPPLMHDIAALAAAAA
AAGAGAAAGGGGGGGADAPHGGAVEGAQAALGEAGAGAGAIAHAAPGAAA
AAAAAGNGNGGPAVLGFTHGDAPARSTSGSVLIHYEGHKSKYDEYINVQS
PRLAPFRSRTTRPLSVTIQSVEKVVNGASVSCSRGVPAPDCVEVSVSCPW
ISHCAGGGVVTYRLPRSTTLGAVLADFCHLAGISLWRATIQRAKLHLASD
ICCGSCAAEELDDRRTLEYHKVTSGSVLLVCVAPSAKDLSPAGPSCAPPP
PPPDGGENGGGGGGGGGYLKRGPGGGGRRGGGGGSGDGSCDTFNHTGTDG
EKADKDEGKSGSGSVGSAAVATAAAAAAAGGQGNTGGGAGAGFGAGVAPG
QAPPVAEFAPPTQHCIHSRMFRTCR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
IPR036047F-box-like_dom_sf