mRNA_P-littoralis_Contig839.10.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig839.10.1 vs. uniprot
Match: A0A6H5JYW2_9PHAE (SH2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JYW2_9PHAE) HSP 1 Score: 861 bits (2224), Expect = 4.070e-289 Identity = 666/1364 (48.83%), Postives = 791/1364 (57.99%), Query Frame = 1
Query: 88 ELELKILLVGAPKSGKTSLVRRLRDKGYREEYVKTLGFDISVVSYGTYQGRPVNLHLWDVAGSQLSAQPCHHALIGQGAEGVMYVADVTSRESLQAVDDWDQALSKFLPPRTCKLLVGHKADLPAYVVNDEALSLYVASASGFKGWCLTVGSSEYGDYDVAARRGXXXXXXADGGGRSKGQSLSGEKQLSVSEAVRTLLGHVFRAGGAGGDAARPAGVLGLSAYTGRATPLTSGSQDDALRTVDLLGLGSRXXXXXXDRKNEKDELLAATAGSS-----REDRDG-----------SEGMKALLERGQGPGSSWRD---------AGAGSIDHSAXXXXXXXXXXXXXXXPAIDGGGDPGWRYFAGRMGREEAEALLRGRPDGTFFLRRKGPSLLVLTYVALSKRPGANANTDTPGSGXXXXXXXXRQHRKSAPASRSPRRLDVLGSPRGEKPVGGGRGGLLGGDTDGVAGATSVQHALLVHEGGFFSDAKGRLGRFPTIELLLKSKISALARYPLSFRRERDRYVPVDSGETKSAAPSLRPNPRAASSSAPSSPLLSSFTAAVHGEGGKDTAGRTGVALRGGGATTVASLVPGIVRGGDPFALGAAD-EASVSPXXXXXXXXXXXRIDKPDNTMSRFVQSLQGRQRRSGASSSPASTTTTGAVRRDGGDWTDSRVTKNSDRANIRAGRGGTGCFPSDGGAFSXXXXXXXXXXXXXWLEAAAA-VEKFGAVAVPAGEVALGKTTALVAGADNASARSQGGSLSS----ASAPGGASSVALQESIIGAISGGGVTLGPGSRKGLASSTDGXXXXXXXXXXXXASA----SSPGRANTVGVRRGSAAQQQRQNQWRQRGCXXXXXKASAMAEAAEAAEAMAVARGHPAARRVEERTLAAQADIDRAMASLEQQLRPLIARRASPHSHSPRRSSPTQSPRSSSSSTDKRRGRRVPASPPPASAFSSPRD-SPISPDLSAPRRFLGREQPQQWWTAAVPEGSVTAPLVAAAMLLMERAWSRRQDLLGSWRKLRERAVDFAVAETTF-AAGSRG---DSRTSGGVVDG-------------VAAAARGAAGNVGPTNSRSRSSSGGGSPLSPLSPSPFHMAGRQLFSLPAGPSVGKDSSGGNRILLERT-GNQPFSTESISIGTGTAARLPAPSLAVDATETTKDGVGVVTTAAAVATDGGGLPGLSCCLDFERVLAGQEKEARPPPLLLLPGGEITPFVGNRDGVSVPGSPSVFPAYRYSHPASGTN-GDGSMVAEYSYSGADQQSGGSLVADGVIPQQXXXXRELMPRGVAGASFFSAAAPPTDGWREIFRDVEIAEERSQEFEDIWKAAGGALRDACEDLAWGEND 4014
EL LK+LLVG PK+GKTSLVRRL DK +RE+YV+TLGFD++VV YGTYQGRPV LHLWDVAGSQL+AQPCHH LIGQGAEGV+YV DVTSRESLQAVDDWDQALSKF PP TCKLLVGHKADLPAYVVNDEALSLYVA ASGFKGWCLTVGSSEYGDYDVAARRG A G R KGQSLSGEKQLSVSEAVRTLLGHVFR+GGA A+RPAGVLGL A GRATPL S DAL T++LLGLG + D ++ + + G RE+R G SEG+ LLERG+GP SWR A G D S G DPGWR+FAGRMGREEAEALLRGRPDGTFFLRRKGPSLLVLTYVA +KRP NANT T G+ ++ KS PA+RSPR +++GSP+GEK G+G L G D +AG+T VQHALL+HEGGFFSD KGRLGRF T+E LLKSKISA+AR+PLSFRRER+ YV +D + + L P ++++S SP +SF A D +RG A++VA G + G LGAA +A+ SP R + F ++L+ R+ + A S +TT RR GDWTDSRV + + N R G G+ + XXXXXX W+E VE+ G AV A + V G N S G SLSS A A G ES++ +G A++ G A A SSP + VR S QQQ Q + + G SAMAEAAEAA MA AR HP RRVEERT +AQA +DRA A L Q+LRPL+AR+ HSP + SP S SSSSS D R RR PP+S+FSS RD SP S D+S+ FLGRE PQQ W AA PEGS TAPL AAA LLMERA + R++L S +L ERAV AVAETT AAGS RT G G ++A+ R A V P+N G GSPLSP S S RQ F +PAG G + GN I + GN P +T S + G A V TE VTTAA DGG L G+S C+DFER+L +E + P GE +PFVG+RD + + S F +HP G D SMVAE S+SG++Q SGGS VA G+ P++ P + S SA D W +FRD+EIAE+R +EF D+W+AAGGAL+DAC+DLA+ +D
Sbjct: 9 ELVLKVLLVGGPKAGKTSLVRRLCDKAFREDYVQTLGFDVTVVPYGTYQGRPVKLHLWDVAGSQLTAQPCHHGLIGQGAEGVLYVMDVTSRESLQAVDDWDQALSKFYPPWTCKLLVGHKADLPAYVVNDEALSLYVAGASGFKGWCLTVGSSEYGDYDVAARRGGGSGATAHGA-RHKGQSLSGEKQLSVSEAVRTLLGHVFRSGGAARGASRPAGVLGLGASAGRATPLPSDHLQDALETMELLGLGGKGAPPVQDENSKDGDTEENSRGRECADWPREERFGDGSKGRPVEMRSEGLGPLLERGRGPDPSWRQGVPRDSLAVATVGDGDAS---------------------GRDPGWRHFAGRMGREEAEALLRGRPDGTFFLRRKGPSLLVLTYVASAKRPNCNANTPTSGA----------RNLKSYPANRSPRMREMVGSPQGEKL---GKGLSLEGVRDSLAGSTLVQHALLMHEGGFFSDEKGRLGRFSTLEELLKSKISAIARHPLSFRRERNGYVLIDQDDPTA----LSHQPASSTTSTNLSPSTNSFARADKAASAHDQI------IRGNPASSVAPSANGNLFGPGSSRLGAAAVDATSSPPSSPLVSSLSPRAGNA-GAENPFDKALRRRRPNTTAESG----STTAVSRRVTGDWTDSRVPSHG-KPNARRG-----------GSVANSGAGSXXXXXXLWMEXXXXXVEQSGPAAVVAAP------SRNVTGVSNVSGLPHGDSLSSDGGTAVASGSFRGTGGAESLL-------------DSRGSAAAGRGGSMNWSGSAVDDAGARGRMSSPSSIFSD-VRGPSFHQQQHQPRMKISGSGRRDTT-SAMAEAAEAAAVMAAARDHPDVRRVEERTRSAQAGVDRAAAVLAQRLRPLVARKTP--MHSPLQRSPRHSQTSSSSSADFRGFRRTS---PPSSSFSSSRDVSPRSLDVSS-APFLGRE-PQQRWIAAAPEGSATAPLAAAAALLMERACTCRRELAVSAHELNERAVALAVAETTSPAAGSLAAATSDRTRGVGTRGXXXXXXXXXXXXXLSASERSAVAIV-PSNE------GSGSPLSP-SRSFLRADSRQRFFMPAGVVGGNGNRSGNEISMGGVQGNAPPATLSAPLQGGQTA--------VRGTEA------AVTTAAPARPDGG-LAGMSGCIDFERILGYEEADNAAP-------GERSPFVGDRDREAAVATSSAFRVD--AHPDKGRRWSDSSMVAERSFSGSNQLSGGS-VAGGLAPREPRDQGN--PLRIMVGSGASALGVDVDEWATVFRDLEIAEDRGREFVDVWEAAGGALKDACDDLAFEADD 1247
BLAST of mRNA_P-littoralis_Contig839.10.1 vs. uniprot
Match: K3WC21_GLOUD (SH2 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WC21_GLOUD) HSP 1 Score: 118 bits (296), Expect = 4.760e-23 Identity = 114/414 (27.54%), Postives = 181/414 (43.72%), Query Frame = 1
Query: 49 ASGDRMQAVGTRSELELKILLVGAPKSGKTSLVRRLRDKGYREEYVKTLGFDISVVSYGTYQGRPVNLHLWDVAGSQLSAQPCH-HALIGQGAEGVMYVADVTSRESLQAVDDWDQALSKFLPPRTCKL-LVGHKADL-PAYVVNDEALSLYVASASGFKGWCLTVGSSEYGDYDVAARRGXXXXXXADGGGRSKGQSLSGEKQLSVSEAVRTLLGHVFRAGGAGGDA-----ARPAGVLGLSAYTGRATPLTSGSQDDALR--TVDLLGLGSRXXXXXXDRKNEKDELLAATAGSSREDRDGSE--------------GMKALLERGQGPGSSW-RDAGAGSIDHSAXXXXXXXXXXXXXXXPAIDGGGDP-GWRYFAGRMGREEAEALLRGRPDGTFFLRRKGPSLLVLTYV 1212
A+ R G ELKI LVG GKTS+VRR + Y +Y T+G D+ + + T++ V LH+WDV+ +++ A HAL+ + +G+ +V +V S+ AVD W +L+K++ + L+ HKADL V+ + ++ Y +A G+KGW TVG S +G+ D K +V EA+ ++ + +A A P G+ SA+T + PL DDAL + LL + ++ +D+ +AA++ + D+ E G A + G +W G + A D D W++FAG + R EA+L G+ +GTF LRRK L+L+YV
Sbjct: 95 AAAPRRGKNGLDETRELKIALVGGSAVGKTSIVRRWLQRSYPAQYSPTIGVDVHSMPF-THKNERVLLHIWDVSSAEIDASASALHALLCEDLDGIFFVFNVHRVSSIAAVDKWRHSLAKYVSAKEIPFFLLSHKADLLQKRVMTSDDIASYARNA-GYKGWMWTVGKSNFGEND---------------------------KHPAVMEALERMIEFIIKARDLADQARATKDTNPQGIFS-SAHT--SVPLEVVQTDDALHQFSASLLRIPTKAITTIP-----RDDNVAASS-VEKPDKASVEKEVKPPQSQQKHRSGKSAAMTATTDYGGNWILGNNKGVYLRATNDSFVANDETEDEERAARDRVNDELAWQFFAGSIDRTRTEAILSGKDEGTFLLRRKDAQTLILSYV 470
BLAST of mRNA_P-littoralis_Contig839.10.1 vs. uniprot
Match: A0A7S2THS0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2THS0_9EUKA) HSP 1 Score: 80.1 bits (196), Expect = 2.540e-13 Identity = 51/144 (35.42%), Postives = 77/144 (53.47%), Query Frame = 1
Query: 88 ELELKILLVGAPKSGKTSLVRRLRDKGYREEYVKTLGFDISVVSYGTY---QGRPVNLHLWDVAGSQLSAQPCHHALIGQGAEGVMYVADVTSRESLQAVDDWDQALSKFLPPRTC--KLLVGHKADLPAYVVNDEALSLYVAS 504
E+ +K+++VG PK GKTS+V R + + + +EY+ T+GF+++ Q + L +WDV S + + H I + GVM V D T +SLQAVDDW +S++ PP + LV K DL A S V+S
Sbjct: 16 EVPIKLVVVGGPKVGKTSIVHRFKKRKFEKEYLPTIGFNVNTFQLTKAIQSQNLDICLQIWDV--SHVELKGFHLETIFEDVSGVMLVVDPTDPKSLQAVDDWRGVVSQYCPPESHIPVTLVVSKIDL-CQRTTQSATSFLVSS 156
BLAST of mRNA_P-littoralis_Contig839.10.1 vs. uniprot
Match: A0A7S3ZBS9_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZBS9_9EUKA) HSP 1 Score: 80.9 bits (198), Expect = 1.350e-12 Identity = 66/222 (29.73%), Postives = 108/222 (48.65%), Query Frame = 1
Query: 43 KAASGDRMQAVGTRSELELKILLVGAPKSGKTSLVRRLRDKGYREEYVKTLGFDISVVSYGTY---QGRPVNLHLWDVAGSQLSAQPCHHALIGQGAEGVMYVADVTSRESLQAVDDWDQALSKFLPPRTC--KLLVGHKADLPAYVVNDEALSLYVASAS--GFKGWCLTVGSSEYGDYDVAARRGXXXXXXADGGGRSKGQSLSGEKQLSVSEAVRTLLG 687
+ +GDR+ + E+ +K+++VG PK GKTS+V R + + + +EY+ T+GF+++ Q + L +WDV S + + H I + GVM V D T +SLQAVDDW + ++ PP + LV K DL A S V+S + G G+S + D+ ++ A GG G + LS SE +++++G
Sbjct: 6 RCCTGDRIDRM-MAEEVPIKLVVVGGPKVGKTSIVHRFKKRKFDKEYLATIGFNVNTFQLTKAIQSQNLDICLQIWDV--SHVELKGFHLETIFEDVSGVMLVVDPTDPQSLQAVDDWRGVVYQYCPPESHIPVTLVVSKIDL-CQRTTQTATSFLVSSLALPGQASLAKLFGASS--EADMKQKKLEKAAASAKGGEAGTGPKTASLADLS-SEEMKSVIG 220
BLAST of mRNA_P-littoralis_Contig839.10.1 vs. uniprot
Match: A0A8B7XLP5_ACAPL (ras-related protein Rab-7L1-like isoform X2 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XLP5_ACAPL) HSP 1 Score: 79.0 bits (193), Expect = 1.420e-12 Identity = 51/152 (33.55%), Postives = 77/152 (50.66%), Query Frame = 1
Query: 85 SELELKILLVGAPKSGKTSLVRRLRDKGYREEYVKTLGFDISVVSYGTYQGRPVNLHLWDVAGSQLSAQPCHHALIGQGAEGVMYVADVTSRESLQAVDDWDQALSKFLP-----PRTCKLLVGHKADLPAYVVNDEALSLYVASASGFKGW 525
+E K+L++G P++GKTS +RR + + Y++T G D + V LH+WD+AG A VM+ D+TSR S + V +W Q L + P C LL+G+K+DL YVV DE ++L ++ F GW
Sbjct: 2 TEKYFKVLIIGDPRTGKTSFMRRYVGHQFTDNYIETQGCDFGLKRIRRSPTELVGLHIWDIAGQDAFRHLTRVFYRSASAAVVMF--DLTSRRSFEHVKEWKQDLDAKVAMPDGSPVPC-LLLGNKSDLDQYVVTDEEITL-MSQDLNFVGW 149
BLAST of mRNA_P-littoralis_Contig839.10.1 vs. uniprot
Match: A0A5B9DCT5_9ARCH (Ras family protein n=1 Tax=Candidatus Prometheoarchaeum syntrophicum TaxID=2594042 RepID=A0A5B9DCT5_9ARCH) HSP 1 Score: 80.9 bits (198), Expect = 1.690e-12 Identity = 44/133 (33.08%), Postives = 70/133 (52.63%), Query Frame = 1
Query: 88 ELELKILLVGAPKSGKTSLVRRLRDKGYREEYVKTLGFDISVVSYGTYQGRPVNLHLWDVAGSQLSAQPCHHALIGQGAEGVMYVADVTSRESLQAVDDWDQALSKFLPPRTCKLLVGHKADLPAYVVNDEAL 486
E +KI+++GAP GKTSL+RR D + E YV T+G DIS + VN LWD+ G P H QGA V D++ +++ + +D W++ L + + +L+ +K DL + V+ E +
Sbjct: 149 EFSVKIIVLGAPGVGKTSLIRRFVDDKFAESYVSTIGVDISRKEVIINEKCTVNESLWDIGGQAQEMAP-HRKRFYQGANFAFLVFDISRKKTFEKIDSWEKDLETSINRQLSVILIANKTDLETHEVDLEEI 280
BLAST of mRNA_P-littoralis_Contig839.10.1 vs. uniprot
Match: A0A0A1U6S2_ENTIV (Rab17, putative n=1 Tax=Entamoeba invadens IP1 TaxID=370355 RepID=A0A0A1U6S2_ENTIV) HSP 1 Score: 78.2 bits (191), Expect = 2.210e-12 Identity = 47/136 (34.56%), Postives = 76/136 (55.88%), Query Frame = 1
Query: 91 LELKILLVGAPKSGKTSLVRRLRDKGYREEYVKTLGFDISVVSYGTYQGRPVNLHLWDVAGSQLSAQPCHHALIGQGAEGVMYVADVTSRESLQAVDDWDQALSK---FLPPRTCKLLVGHKADLPAYVVNDEALS 489
+ +K+L+VG P SGKTS++ + D + E Y T+G + S + TY+GR V + LWDVAG A + GA + V D+TS++S++AV W + F + +LVG+K+DL +N++ L+
Sbjct: 8 IRMKVLVVGGPASGKTSMIHQFCDGAFEEIYQPTIGVEFSS-KFVTYEGRQVEIRLWDVAGQDYYAAMTR--VYFSGAISALVVCDITSKDSIEAVVKWKANIDDRVLFNEQKIPVILVGNKSDL----LNEKELT 136
BLAST of mRNA_P-littoralis_Contig839.10.1 vs. uniprot
Match: A0A7C1LPC6_9ARCH (GTP-binding protein (Fragment) n=2 Tax=root TaxID=1 RepID=A0A7C1LPC6_9ARCH) HSP 1 Score: 75.1 bits (183), Expect = 1.250e-11 Identity = 49/140 (35.00%), Postives = 75/140 (53.57%), Query Frame = 1
Query: 82 RSELELKILLVGAPKSGKTSLVRRLRDKGYREEYVKTLGFDIS----VVSYGTYQGRPVNLHLWDVAGSQLSAQPCHHAL---IGQGAEGVMYVADVTSRESLQAVDDWDQALSKFLPPRTCKLLVGHKADLPAYVVNDE 480
R+E+ K+++VG P GKTSL+R+ + + EY+ T+G +I + T + V+L LWD+AG QP + L GA+GVM V D+T S V++W Q K+ ++L+G+K DL NDE
Sbjct: 16 RTEMIFKVIVVGDPAVGKTSLLRKFSSEKFEYEYIPTVGVNIVKEQVAIKDNTGKDVTVSLMLWDIAG-----QPQFYMLHRPYFNGADGVMLVYDITRSSSFSNVNNWWQTCVKYALSSAPRILIGNKIDL-----NDE 145
BLAST of mRNA_P-littoralis_Contig839.10.1 vs. uniprot
Match: A0A6U3NLC3_9STRA (Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6U3NLC3_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.490e-11 Identity = 44/128 (34.38%), Postives = 72/128 (56.25%), Query Frame = 1
Query: 100 KILLVGAPKSGKTSLVRRLRDKGYREEYVKTLGFDISVVSYGTYQGRPVNLHLWDVAGSQLSAQPCHHALIGQGAEGVMYVADVTSRESLQAVDDWDQALSKFLPPRTCKLLVGHKADLPA-YVVNDE 480
K++L+G GK+ L+ R D + E Y+ T+G D + + V L +WD AG + + +GA+G++ V DVTS++S V+DW + ++++ TCKLLVG+K+D A VV +E
Sbjct: 20 KLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTV-KIDKKTVKLQIWDTAGQERFRTIT--SAYYRGADGIIMVYDVTSKDSFDHVNDWMKEVNRYASEGTCKLLVGNKSDRTADRVVTEE 144
BLAST of mRNA_P-littoralis_Contig839.10.1 vs. uniprot
Match: A0A7S2N4U8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N4U8_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.860e-11 Identity = 43/128 (33.59%), Postives = 72/128 (56.25%), Query Frame = 1
Query: 100 KILLVGAPKSGKTSLVRRLRDKGYREEYVKTLGFDISVVSYGTYQGRPVNLHLWDVAGSQLSAQPCHHALIGQGAEGVMYVADVTSRESLQAVDDWDQALSKFLPPRTCKLLVGHKADLPA-YVVNDE 480
K++L+G GK+ L+ R D + E Y+ T+G D + + V L +WD AG + + +GA+G++ V DVTS++S V+DW + ++++ TCKLLVG+K+D A +V +E
Sbjct: 19 KLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTV-KIDKKTVKLQIWDTAGQERFRTIT--SAYYRGADGIIMVYDVTSKDSFDHVNDWMKEVNRYASEGTCKLLVGNKSDRTADKIVKEE 143 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig839.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig839.10.1 >prot_P-littoralis_Contig839.10.1 ID=prot_P-littoralis_Contig839.10.1|Name=mRNA_P-littoralis_Contig839.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1338bp EARNHHRIGAGATMKAASGDRMQAVGTRSELELKILLVGAPKSGKTSLVRback to top mRNA from alignment at P-littoralis_Contig839:82090..93600+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig839.10.1 ID=mRNA_P-littoralis_Contig839.10.1|Name=mRNA_P-littoralis_Contig839.10.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11511bp|location=Sequence derived from alignment at P-littoralis_Contig839:82090..93600+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig839:82090..93600+ >mRNA_P-littoralis_Contig839.10.1 ID=mRNA_P-littoralis_Contig839.10.1|Name=mRNA_P-littoralis_Contig839.10.1|organism=Pylaiella littoralis U1_48|type=CDS|length=4014bp|location=Sequence derived from alignment at P-littoralis_Contig839:82090..93600+ (Pylaiella littoralis U1_48)back to top |