mRNA_P-littoralis_Contig83.98.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig83.98.3
Unique NamemRNA_P-littoralis_Contig83.98.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig83.98.3 vs. uniprot
Match: D8LK17_ECTSI (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK17_ECTSI)

HSP 1 Score: 358 bits (918), Expect = 2.440e-120
Identity = 189/335 (56.42%), Postives = 219/335 (65.37%), Query Frame = 1
Query:    1 TLPAITEGATCEDWAAWIPPRSDPAVVMQVVSEAYIDIERNFIRLMERNSALTRHNLFLMCMDDESARFFESSMNIRCVSVSALKLPSHSAIWKLRVKVVSCLVEVGRVDVIMSDADALWLGDPIRELYGSFKAPXXXXXXXXXXXXRGGIHDSDVVASRGSYPKQLGDEWGSTICMGFILLRGGNVAAMKEFLDTMESFVLTIEDDQISINQAAHDLGIVWDKDSDMRYAKSTDLGTGTVISLPADAE--------------------GR-------PFSVTLLPHSKYTRRCGTTPISAET-IVAHCLDPTKRANAKTIWMQQQNLWFVQEDP 921
            TLPAIT+ ATC DWAAWIPPRS PAVVMQVVSE YIDIERNFIRLMERNS  TR N++LMCMDD S  FF++ M IRCV +SAL LP+H  IW+LRV+VVSCL+E+G VDVIMSDADALWL DP ++L+                  RG     D+VASRGS+P     EWGST+CMGFIL R  NVA MK FLD M   V+  +DDQIS+N+AA  LGIVWDK+SDMRY +ST  G G +  L                         GR       PF VTLLPHS YTR CG   +S +T +VAHC  P K A  KT WM++ NLW VQ+DP
Sbjct:   26 TLPAITKDATCVDWAAWIPPRSRPAVVMQVVSEGYIDIERNFIRLMERNSGFTRRNIYLMCMDDASKNFFDTKMGIRCVPMSALDLPTHEHIWQLRVRVVSCLLEIGNVDVIMSDADALWLADPAKDLFS-----------------RGDGGRGDIVASRGSWPNDQWKEWGSTLCMGFILFRARNVAGMKRFLDVMADLVVQNKDDQISVNRAAKQLGIVWDKNSDMRYEESTGYGRGIIAGLGTSNNSTSGGGGDLFIGQTGHGVVVGRGTREVEAPFRVTLLPHSAYTRLCGRRTLSNQTTVVAHCYFPQKEAGVKTSWMKKANLWSVQDDP 343          
BLAST of mRNA_P-littoralis_Contig83.98.3 vs. uniprot
Match: A0A6H5LI82_9PHAE (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LI82_9PHAE)

HSP 1 Score: 339 bits (870), Expect = 2.150e-113
Identity = 175/301 (58.14%), Postives = 213/301 (70.76%), Query Frame = 1
Query:    4 LPAITEGATCEDWAAWIPPRSDPAVVMQVVSEAYIDIERNFIRLMERNSALTRHNLFLMCMDDESARFFESSMNIRCVSVSALKLPSHSAIWKLRVKVVSCLVEVGRVDVIMSDADALWLGDPIRELYGSFKAPXXXXXXXXXXXXRGGIHDSDVVASRGSYPKQLGDEWGSTICMGFILLRGGNVAAMKEFLDTMESFVLTIEDDQISINQAAHDLGIVWDKDSDMRYAKSTDLGTGTVISLPADAEGRPFSVTLLPHSKYTRRCGTTPISAETIVAHCLDPTKRANAKTIWMQQQNLWF 906
            LPAIT  ATC DW  WIPPRSDPA+VMQVVS  Y+++ERNFIRLME NSALTR +L+LMCMD+ S  FFESSMNIRC+ ++A   PSH+ IW LR +VVSCLVE G+ DVIMSDADALWL DP ++    F  P               + DS VVASRG +PK LG EWG+T+CMGF+L R      + EFL+ M++ V   +DDQIS+N AA +LGIVWD++SDMRY +S   G GT+ +L  D   +PFSVTLLPH+ YTR C  TPIS +T+VAHC  P K A++KT WM Q  LWF
Sbjct:   35 LPAITPKATCADWMKWIPPRSDPAIVMQVVSRHYLELERNFIRLMELNSALTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQ-DVIMSDADALWLDDPFKD----FNLPR--------------VIDSSVVASRGKFPKPLGLEWGATMCMGFVLFRATGRRVVGEFLEVMDALVHKNKDDQISVNLAAENLGIVWDQESDMRYVESDSFGFGTIDTL-VDENNQPFSVTLLPHNAYTRVCDETPISNKTVVAHCWAP-KTADSKTGWMVQSKLWF 314          
BLAST of mRNA_P-littoralis_Contig83.98.3 vs. uniprot
Match: A0A6H5JTX9_9PHAE (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX9_9PHAE)

HSP 1 Score: 284 bits (727), Expect = 2.270e-91
Identity = 164/363 (45.18%), Postives = 197/363 (54.27%), Query Frame = 1
Query:   76 VVMQVVSEAYIDIERNFIRLMERNSALTRHNLFLMCMDDESARFFESSMNIRCVSVSALKLPSHSAIWKLRVKVVSCLVEVGRVDVIMSDADALWLGDPIRELYGSFKAPXXXXXXXXXXXXRGGIHDSDVVASRGSYPKQLGDEWGSTICMGFILLRGGNVAAMKEFLDTMESFVLTIEDDQ-----------------------------------------------------ISINQAAHDLGIVWDKDSDMRYAKSTDLGTGTVISLPADAE--------------------GR-------PFSVTLLPHSKYTRRCGTTPISAET-IVAHCLDPTKRANAKTIWMQQQNLWFVQEDP 921
            + + VVSE YIDIERNFIRLMERNS  TR N++LMCMD  S  FF++ M IRCV +SAL LP+H  IW+LRVKVVSCL+EVG VDVIMSDADALWL DP ++L+                  RGG    D++ASRGS+P +   EWGST+CMGFI+ R  NVA MK FLD M   V+  +DDQ                                                     IS+N+AA  LGIVWDK+SDMRY +ST  G G +  L +                       GR       PF V LLPHS YTRRCG   +S +T +VAHC  P K A  KT WM++ NLW VQ+DP
Sbjct:    1 MTVPVVSEGYIDIERNFIRLMERNSGFTRSNIYLMCMDGASKNFFDAKMGIRCVPMSALDLPTHQDIWQLRVKVVSCLLEVGHVDVIMSDADALWLADPAKDLFS-----------------RGGGGRGDIIASRGSWPNEQSKEWGSTLCMGFIVFRARNVAGMKRFLDVMADLVVQNKDDQMLCECATGVENDFCGFPASSRPRSNPTLTESAFCVAAPSPNASLILSIVSVEKISVNRAAKQLGIVWDKNSDMRYEESTGYGRGVIAGLGSSNNSTSGGGGDLFIGQTGHGVVVGRGTREVEAPFRVILLPHSAYTRRCGRRTLSNQTTVVAHCYFPQKEAGVKTSWMKKANLWSVQDDP 346          
BLAST of mRNA_P-littoralis_Contig83.98.3 vs. uniprot
Match: A0A6H5KMQ8_9PHAE (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ8_9PHAE)

HSP 1 Score: 248 bits (632), Expect = 5.150e-77
Identity = 136/307 (44.30%), Postives = 182/307 (59.28%), Query Frame = 1
Query:    1 TLPAITEGATCEDWAAWIPPRSDPAVVMQVVSEAYIDIERNFIRLMERNSALTRHNLFLMCMDDESARFFESSMNIRCVSVSALKLP-SHSAIWKLRVKVVSCLVEVGRVDVIMSDADALWLGDPIRELYGSFKAPXXXXXXXXXXXXRGGIHDSDVVASRGSYPKQLGDEWGSTICMGFILLRGGNVAAMKEFLDTMESFVLTIEDDQISINQAAHDLGIVWDKDSDMRYAKSTDLGTGTVISLPADAEGRPFSVTLLPHSKYTRRCGTTPISAETIVAHCLDPTKRANAKTIWMQQQNLWFVQED 918
            TLP IT+ ++C D  AW+PPRS PAVV QVVSE Y  +E NFI  ME +S  +R NL+L+C+D+ES   F+  + IRCV    L  P S   +W LRV+   CL+  G+ DV+MSDADA+WL DP  +                         DS+VVASR   P  L  +WG+T+CMGF   R G  +AM+ F+  +   V  + DDQ ++N+A   LG+VWD  SDM +  ST  GTG + ++ A+  G P  VTLLPH+KYTR C  TPIS +TIVAHC+   K     T WM++ +LW + +D
Sbjct:   60 TLPPITKDSSCSDMLAWLPPRSSPAVVFQVVSEPYASLEANFISNMELHSTFSRENLYLVCLDEESVAIFDG-LGIRCVRYGCLGCPMSRLDVWVLRVEATLCLLNAGQ-DVLMSDADAIWLRDPTNDFASDLNM------------------DSNVVASRAVMPFPLYHKWGATVCMGFAFFRAGG-SAMQAFMTVVGEIVNELGDDQKAVNEALDKLGVVWDPTSDMDFTNSTRPGTGVIENITAN--GDPLKVTLLPHNKYTRSCRRTPISNDTIVAHCVSSDKGEGMAT-WMKEAHLWNLPDD 342          
BLAST of mRNA_P-littoralis_Contig83.98.3 vs. uniprot
Match: D7FGV6_ECTSI (Acetyltransferase (Isoleucine patch superfamily protein) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV6_ECTSI)

HSP 1 Score: 246 bits (627), Expect = 2.530e-75
Identity = 136/307 (44.30%), Postives = 182/307 (59.28%), Query Frame = 1
Query:    1 TLPAITEGATCEDWAAWIPPRSDPAVVMQVVSEAYIDIERNFIRLMERNSALTRHNLFLMCMDDESARFFESSMNIRCVSVSALKLP-SHSAIWKLRVKVVSCLVEVGRVDVIMSDADALWLGDPIRELYGSFKAPXXXXXXXXXXXXRGGIHDSDVVASRGSYPKQLGDEWGSTICMGFILLRGGNVAAMKEFLDTMESFVLTIEDDQISINQAAHDLGIVWDKDSDMRYAKSTDLGTGTVISLPADAEGRPFSVTLLPHSKYTRRCGTTPISAETIVAHCLDPTKRANAKTIWMQQQNLWFVQED 918
            TLP IT+ ++C D  AW+PPRS PAVV QVVSE Y  +E NFI  ME +S  +R NL+L+C+D+ES   F+  + IRCV    L  P S   IW LR+ V  CL+  G+ DV+MSDADA+WL DP  +L                        DS+VVASR   P  L  +WG+TICMGF   R G  +AM+ F+  +E     + +DQI++N+A + L +VWD  SDM +  +T  GTG + ++  D  G    VTLLPH+KYTR C  TPIS +TIVAHC+   K     T WM++ +LW + +D
Sbjct:  135 TLPPITKDSSCSDMLAWLPPRSSPAVVFQVVSEPYASLEENFISNMELHSTFSRENLYLVCLDEESVAIFDG-LGIRCVRYGCLGCPVSRGDIWVLRIDVTICLLNAGQ-DVLMSDADAIWLRDPTDDLASD------------------AFLDSNVVASRAVMPFPLYHKWGATICMGFAFFRAGG-SAMQAFMTVVEEIANELGNDQIAVNEALNKLDVVWDPMSDMNFTDNTRPGTGVIENITVD--GGSLKVTLLPHNKYTRSCRRTPISNDTIVAHCVSSDKGEGMAT-WMKEAHLWNLPDD 417          
BLAST of mRNA_P-littoralis_Contig83.98.3 vs. uniprot
Match: D8LSV3_ECTSI (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSV3_ECTSI)

HSP 1 Score: 241 bits (615), Expect = 9.110e-74
Identity = 129/307 (42.02%), Postives = 187/307 (60.91%), Query Frame = 1
Query:    1 TLPAITEGATCEDWAAWIPPRSDPAVVMQVVSEAYIDIERNFIRLMERNSALTRHNLFLMCMDDESARFFESSMNIRCVSVSALKLP-SHSAIWKLRVKVVSCLVEVGRVDVIMSDADALWLGDPIRELYGSFKAPXXXXXXXXXXXXRGGIHDSDVVASRGSYPKQLGDEWGSTICMGFILLRGGNVAAMKEFLDTMESFVLTIEDDQISINQAAHDLGIVWDKDSDMRYAKSTDLGTGTVISLPADAEGRPFSVTLLPHSKYTRRCGTTPISAETIVAHCLDPTKRANAKTIWMQQQNLWFVQED 918
            TL AI+  A+C D  AW+PP+  PAVV QVVS+AY+ +++NFI  ME +S  +R N++L+C+D+ES   F  ++ IRCV    +  P S   +W LR++V  CL++ G +DV+MSDADA+WL DP+ +                         DS +VASRG+ P  L   WG+TICMGF+L R G+  A+ +F++ +  F   +E+DQ ++N A   L +VWD  SDM ++ ST  G G V S+ +   G   +V+LLPH+KYTR C  TPIS ET+VAHC+  T +      WM++ +LW V +D
Sbjct:  118 TLLAISRHASCADIVAWLPPQLQPAVVFQVVSKAYVSVQKNFISNMELHSTFSRENMYLICLDEESVESF-GALGIRCVRFGCMGCPVSRHHVWALRIEVSVCLLKAG-IDVLMSDADAVWLHDPMDDFDSD------------------DYRDSSIVASRGAMPVPLFRTWGATICMGFVLFRAGS-NAIYQFMEVVGEFTEELENDQQAVNLALQKLDVVWDPTSDMSFSDSTRSGVGVVNSIYS---GESLTVSLLPHNKYTRSCRRTPISVETVVAHCIS-TDKGEGMATWMKEAHLWNVPDD 399          
BLAST of mRNA_P-littoralis_Contig83.98.3 vs. uniprot
Match: D7G4E2_ECTSI (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E2_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 8.330e-54
Identity = 102/205 (49.76%), Postives = 135/205 (65.85%), Query Frame = 1
Query:  310 VEVGRVDVIMSDADALWLGDPIRELYGSFKAPXXXXXXXXXXXXRGGIHDSDVVASRGSYPKQLGDEWGSTICMGFILLRG-GNVAAMKEFLDTMESFVLTIEDDQISINQAAHDLGIVWDK-DSDMRYAKSTDLGTGTVISLPADAEGRPFSVTLLPHSKYTRRCGTTPISAETIVAHCLDPTKRANAKTIWMQQQNLWFVQED 918
            VE G  DV+MSDADALWL DP+++    F  P              G+  S +VASRGS+P ++G  WG+TICMGFIL R   +  AM+EF+  M + VL  +DDQI++N AA DLGIVW++ DSDMRY +ST  G G + SL +D + +PF+VTLLPHS YTR C +TP+S  T+VAHC+  +K   +K  WM + +LW V ED
Sbjct:   64 VEAGH-DVMMSDADALWLADPMKD----FSLP--------------GVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSL-SDDDNQPFTVTLLPHSAYTRICASTPVSNTTVVAHCIS-SKTPQSKADWMHRMDLWAVDED 247          
BLAST of mRNA_P-littoralis_Contig83.98.3 vs. uniprot
Match: D7FQM0_ECTSI (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM0_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 3.620e-43
Identity = 82/167 (49.10%), Postives = 107/167 (64.07%), Query Frame = 1
Query:  136 MERNSALTRHNLFLMCMDDESARFFESSMNIRCVSVSALKLPSHSAIWKLRVKVVSCLVEVGRVDVIMSDADALWLGDPIRELYGSFKAPXXXXXXXXXXXXRGGIHDSDVVASRGSYPKQLGDEWGSTICMGFILLRG-GNVAAMKEFLDTMESFVLTIEDDQISI 633
            ME  ++ TR++L+LMC+DD+S  FFES M I C+ +S L + SH  IW LRV+VVSCL E G  DVIMSDADALWL DP+++    F  P              G+ DS +VASRG  PK++G  WG+T+CMGFIL R   N  AM +F+  M + V   EDDQI++
Sbjct:    1 MELRTSFTRNHLYLMCLDDDSLHFFESFMGIHCIPLSGLNISSHEQIWVLRVRVVSCLAEAGH-DVIMSDADALWLADPMKD----FSLP--------------GVIDSSIVASRGKKPKEVGKVWGATMCMGFILFRATANRTAMGKFVTVMNALVFESEDDQIAV 148          
BLAST of mRNA_P-littoralis_Contig83.98.3 vs. uniprot
Match: A0A8J6CCA2_DIALT (Nucleotid_trans domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCA2_DIALT)

HSP 1 Score: 105 bits (263), Expect = 1.130e-22
Identity = 81/283 (28.62%), Postives = 129/283 (45.58%), Query Frame = 1
Query:   76 VVMQVVSEAYIDIERNFIRLMERNSALTRHNLFLMCMDDESARFFESSMNIRCVSVSALKLPSHSAIWKLRVKVVSCLVEVGRVDVIMSDADALWLGDPIRELYGSFKAPXXXXXXXXXXXXRGGIHDSDVVASRGSYPKQLGDEWGSTICMGFILLRGGNV---AAMKEFLDTMESFVLTIEDDQISINQAAHDLGIVWDKDSDMRYAKSTDLGTGTVISLPADAEGRPFSVTLLPHSKYTRRCGTTPISAETIVAHCLDPTKRANAKTIWMQQQNLWFVQE 915
            VV+ V++ AY  +  NFIR    +  L      ++C D  +A    + +  RC         S + ++  R+  V+ LV +GR DV+++D DA+WLGDP+ ++  +                      + ++ SRG  P     +WG+++CMGFI  RG +    AAM    + M        +DQ   N       +VWD+   +R+  S D   GT+    A+A      V +LPH  Y R C      +  I+AHC    KRA+ K   +  +NLW++ E
Sbjct:   50 VVVMVLNSAYTRVFENFIRAPGAHH-LAAWETHIICTDRATAVSL-AKLGWRCQDTVKTGR-SAAQVYTRRIPYVAHLVHLGR-DVLITDVDAIWLGDPLPDIMAT---------------------QAGIIGSRGRSPHL---DWGASLCMGFIFFRGSDPLVRAAMPVLTEPMR-------EDQTDFNHNMQRERLVWDEGR-VRFVDSIDTSFGTLRPKNANAGHAGLRVAMLPHKSYVRICEDKVDYSTVIIAHCHSRGKRAHLKVQSLGAKNLWYIPE 296          
BLAST of mRNA_P-littoralis_Contig83.98.3 vs. uniprot
Match: A0A482S083_9ARCH (Nucleotid_trans domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S083_9ARCH)

HSP 1 Score: 67.0 bits (162), Expect = 6.460e-9
Identity = 65/294 (22.11%), Postives = 120/294 (40.82%), Query Frame = 1
Query:   70 PAVVMQVVSEAYIDIERNFIRLMER--NSALTRHNLFLMCMDDESARFFESSMNIRC-----------VSVSALKLPSHSAIWKLRVKVVSCLVEVGRVDVIMSDADALWLGDPIRELYGSFKAPXXXXXXXXXXXXRGGIHDSDVVASRGSYPKQLGDEWGSTICMGFILLRGGNVA-------------------AMKEFLDTMES-FVLTIEDDQISINQAAHDLGIVWDKDSDMRYAKSTDLGTGTVISLPADA-----------------EGRPFSVTLLPHSKYTRRC 801
            P  V+ ++   Y ++ +N++   +       +  NL ++CMD        +   +RC           +SVS       S++W  R+++++  + + + DV++SD DA WL  P  +L    +                    SD+VASRG +P  + ++WGST+CMGF+ ++  +                     A + FL T  + ++     ++ +    A   G    K++D +++ +T L     ++ P D                      F+VTLLP S Y R C
Sbjct:   62 PHRVLLLLDSKYFEVFQNWLMYYKGVCPGEASDKNLEIVCMDIAVTDMLHNHTALRCSPHYTAPSPASISVSNAASSFKSSVWIKRLEIINMFL-MQQQDVLVSDTDAFWLRSPYTDLTLLSE-------------------QSDIVASRGWFPIHISEQWGSTLCMGFLYIKASDFTRDVFNRVLGDMHLTNLQARARQHFLSTQNNTYIDPDHPERAAFVFNADTYGTKGIKEADDQWSLNTVLFHSN-LTFPEDMVLAYREQRHTGQLIWGNASSVFNVTLLPESLYVRNC 334          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig83.98.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LK17_ECTSI2.440e-12056.42Nucleotid_trans domain-containing protein n=1 Tax=... [more]
A0A6H5LI82_9PHAE2.150e-11358.14Nucleotid_trans domain-containing protein n=2 Tax=... [more]
A0A6H5JTX9_9PHAE2.270e-9145.18Nucleotid_trans domain-containing protein n=1 Tax=... [more]
A0A6H5KMQ8_9PHAE5.150e-7744.30Nucleotid_trans domain-containing protein n=2 Tax=... [more]
D7FGV6_ECTSI2.530e-7544.30Acetyltransferase (Isoleucine patch superfamily pr... [more]
D8LSV3_ECTSI9.110e-7442.02Nucleotid_trans domain-containing protein n=2 Tax=... [more]
D7G4E2_ECTSI8.330e-5449.76Nucleotid_trans domain-containing protein n=2 Tax=... [more]
D7FQM0_ECTSI3.620e-4349.10Nucleotid_trans domain-containing protein n=1 Tax=... [more]
A0A8J6CCA2_DIALT1.130e-2228.62Nucleotid_trans domain-containing protein n=1 Tax=... [more]
A0A482S083_9ARCH6.460e-922.11Nucleotid_trans domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig83contigP-littoralis_Contig83:367622..371330 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LK17
PFAMsNucleotid_trans
Model size924
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue4e-121
EggNOG OGs2C6NG@1|root,2SGR5@2759|Eukaryota
DescriptionNucleotide-diphospho-sugar transferase
Cds size924
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791691.197213-CDS-P-littoralis_Contig83:367621..3677631680791691.197213-CDS-P-littoralis_Contig83:367621..367763Pylaiella littoralis U1_48CDSP-littoralis_Contig83 367622..367763 -
1680791691.2134771-CDS-P-littoralis_Contig83:368043..3682011680791691.2134771-CDS-P-littoralis_Contig83:368043..368201Pylaiella littoralis U1_48CDSP-littoralis_Contig83 368044..368201 -
1680791691.2308326-CDS-P-littoralis_Contig83:368804..3691411680791691.2308326-CDS-P-littoralis_Contig83:368804..369141Pylaiella littoralis U1_48CDSP-littoralis_Contig83 368805..369141 -
1680791691.242748-CDS-P-littoralis_Contig83:369845..3700451680791691.242748-CDS-P-littoralis_Contig83:369845..370045Pylaiella littoralis U1_48CDSP-littoralis_Contig83 369846..370045 -
1680791691.2561219-CDS-P-littoralis_Contig83:371243..3713301680791691.2561219-CDS-P-littoralis_Contig83:371243..371330Pylaiella littoralis U1_48CDSP-littoralis_Contig83 371244..371330 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig83.98.3prot_P-littoralis_Contig83.98.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig83 367622..371330 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig83.98.3

>prot_P-littoralis_Contig83.98.3 ID=prot_P-littoralis_Contig83.98.3|Name=mRNA_P-littoralis_Contig83.98.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=308bp
TLPAITEGATCEDWAAWIPPRSDPAVVMQVVSEAYIDIERNFIRLMERNS
ALTRHNLFLMCMDDESARFFESSMNIRCVSVSALKLPSHSAIWKLRVKVV
SCLVEVGRVDVIMSDADALWLGDPIRELYGSFKAPPPLLSDGGGGGGRGG
IHDSDVVASRGSYPKQLGDEWGSTICMGFILLRGGNVAAMKEFLDTMESF
VLTIEDDQISINQAAHDLGIVWDKDSDMRYAKSTDLGTGTVISLPADAEG
RPFSVTLLPHSKYTRRCGTTPISAETIVAHCLDPTKRANAKTIWMQQQNL
WFVQEDP*
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mRNA from alignment at P-littoralis_Contig83:367622..371330-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig83.98.3 ID=mRNA_P-littoralis_Contig83.98.3|Name=mRNA_P-littoralis_Contig83.98.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=3709bp|location=Sequence derived from alignment at P-littoralis_Contig83:367622..371330- (Pylaiella littoralis U1_48)
ACCCTGCCGGCGATTACGGAGGGCGCCACGTGCGAAGACTGGGCGGCGTG GATACCTCCGAGGTCTGATCCGGCGGTAGTGATGCAGGTGTGTGCGTGCC TATGTTGTTAATGGTATGTTAAAAAAATAACGGCAAGTAGGAAACGTCCT CGAGGTGCGGTCGATTGTTCCAAAGTCGATATACATCAGATATCTATCCT CTCTCGCAGCGAATTCAGCGTCGTTTTTGTACTTTAAGGGTGGTGGCATT GGTAAAAAGGTCTCGTCGAGAGCATTCCATAAGCGTGTGTGATATTGTGT GGTGTCATAACCACTGGTGGCCTACCCTTCGTTGCGCAATATTGGATGGA GATTTTCGAACATCTGATCATGGCGTCCCGTGTTTCATCTATACCGTTGG ACACGTTAGGTGCAGCAATGCAACGTTCGGTACGAGTAGAAGACGTGATG GGATACACGAAAAGCATGAACATTGACCGCATGATTTCGAAGTGAAGTCA CTAGGATTATCGGTCGATGCACCATCATCAGATTCAGGTATAACGTATTT TTCCTTTTCGCCGGATTACTTGGGCCACGAATGTTTTTACCACCAAATTT TCGACACGTTGGGGGTATGCATGTCGATCAACTGACAAGGAAAAGAGACC TCACACCACCACACCGCCACAGCGCTCTTCACCTTTCCTGGTCATCAGTG GATCGCCACCAAACCAAAGAGGCAACACGCTGTGAAGAAGCGTGACCGAT GTAATGATACATGCATGCTCCAAGACCAACAACCCGTGAGCAAAACCTCT GCGAGATTTTGCACGGATTTCGGGCCCAAACCTTGTGCGTCTTACTCACC GAGTTCGCCCACGATTTTTGGCTTGGAGCATGTATCATACGCACGTAATA CACAATATTTCGGTCATGCTCTACACACCAGAAGCCTACGCTAATTCCAA CTTGTTGAGCGAAGAAGCCTCTAGAGATGCGGGGCGTGCAGCCTCGCCCT GGTTTGGTTACGATTCGCTGATCAGGAAGGAAGGAGGTCTATCTTTTACC AGGAAATGTCCTTGGGAGCTTCAGAGGGTGCACGGATGTCCCCACTCACC CCCGATGTTGTTGAAATCCCGAGGTCCAAAATTCGTGACCACCAAACTCG GCCTTTAGCCTGTTGAGTCTACTCTGTTTCGACCGAGGCGGCCATGGGGG GTGTGCAGAGGATAATGTCTACCAGTATTGATTATTCGGGGCCCCCAAAC AATGGTGCTGTGATGCATCGTATCGCATGCTGCAGGTGGTGAGCGAAGCC TACATCGACATCGAGCGAAATTTCATCCGGCTCATGGAGCGAAACTCGGC GTTGACCCGGCATAACCTGTTTCTGATGTGCATGGACGACGAGTCCGCTC GATTTTTCGAAAGTTCCATGAATATTCGGTGCGTCTCCGTGAGCGCCCTG AAGCTGCCGTCCCATTCAGCCATCTGGAAGCTCAGGTGATGTTACTCTTC ATGCAAACTCGTAGGTCATACGAACAAAACCAATCAAGTTTATAGTGAGT TATGTTCTGGCCCATGTTGCCTCTATCCACTGTACCTCTCTTCTTCTCTC CCTCTCCCCTCGCCTTGCCCCCCCCCCCCCCCCCCCCGCGCCGTTTTCTC TCTCCCATGGCTTCTTGGTATCCCCATTCCTCCCTTTTGTTTTTTTGCTG GATTTTGTACAAGTTTCCCGAAAGATAGCCAGTCCGGCCTACCACGCCCC GGCCACTCCATCAAAATGATCACTTCGTCACAAAAATACTACTTCGAAGT ACTTTAGTTCGTTGCTGCGAAGAGAATAGAAGCAGCGGAGTCAGTCGAGT CAGTCGTTCATTTAGGGTTTCCCCCGCGGGGAGCAACTTCGTCTCGTCAT GCATGCGTCCAACAACACGGACGTGTGTAGAGATCACGTTCTGCTGTGAT GGAGGCGGTGACGCATCGCATCGCGTGTCGCATCGACTCGCACCGACTCT ACCGCACACCACTCCGCAACAATCTAGTATCCCTTTTGTCGTGGTCTATC TTGCCGTGTGCGTGTTGATCTTCGTCGCTCAGAACAGAACCTCGTATCCA ACACCACGAAAGAAATGTGAAAACCTTTTCGTTTGATCGAATTCACTCCC ACTCCCCCCCCCCCCCCTCTACCCCCCCCCCTCTTTAAGGGTAAAGGTGG TCTCTTGCCTGGTGGAGGTAGGCCGTGTGGACGTCATCATGAGTGACGCG GACGCGTTGTGGCTCGGTGATCCAATACGAGAGCTGTACGGCAGCTTCAA GGCCCCGCCGCCGCTGTTGTCTGATGGTGGCGGTGGCGGGGGAAGAGGAG GCATCCACGACAGCGACGTGGTGGCCTCGCGGGGTAGTTATCCGAAACAA CTCGGGGACGAGTGGGGCTCGACGATCTGCATGGGGTTCATTCTACTCCG AGGAGGCAATGTCGCGGCTATGAAGGAGTTCCTCGATACTATGGAGAGCT TCGTCTTGACGATCGAGGATGACCAGGTATGTACTTCCAAGTATGATTTG TGCAAAAACACACTCACTCATACTTGGAAGTATAATAGTACGTTTCCATA TTCGGTCGCCCCGGTGGTTCAGTTGGTAACCCACGTAAACTTCTGACATT CACGCGTGAGATATAATCCCAGTGCAGTAACACGATCTGGTTTTTCTTCT CACAATGCGCGTGAAATCGGAAAGCGATTAATTCGTGAGTAAACAAAATT CGATCGTATCATCGACGAGGGAAAGGGATTGCTGTGCCCTCTCTCGCGAT AAAAGCTCAACCAAAACAAGGCAAGCACCGCAGAGGGAAGTGGAGAAAAA AAAAAAACTGTGTTGACTTCCCCCTGTGTGACCCCAGTTGGAGCGTCGAC CTACCCGGAAGGTGCAGAGTGGTGTCCAATTAAAGGGATGACAACATACA CATATTATCTTTGAGTCAACCTTTTACGTGAAAGTGTGTGTGTTGTCTCC CATCTGTTGTTCTGGAAGTCTGTGGTTGATTTCCGCACATGTACTTCGTA CTTCGAAGTATCACCTTACGCCGCCATTCGTTTGGGTGACTTGTTTTCCG TTGTCTTTTTTGCTGTGGGTGGGGGACAGATATCGATCAACCAAGCGGCG CATGACCTCGGGATAGTGTGGGACAAGGACAGCGATATGCGCTACGCAAA AAGCACCGACCTTGGAACAGGAACGGTCATCTCTCTCCCTGCCGATGCGG AGGGGCGACCCTTCAGCGTGACTCTTCTCCCTCACAGGTACAATACTACG GAGGTACTGCTGTTGCTGTGCACAACGTAATCGATACCTATACAATACCT TTCACTGTCCTTCCTTTATACGATATGTCGTCGGCTCCTGCCTGAGCTCG CTAGCTGCCCAACCTTTTTCCGAGCTTCTTCGAAGTACATCCTCCCGTCC CTCCTCCTCTAGCCAGCCTGTCTACTGTAGTTCTCTTCAAGTATCATAGC CTGACACTGCTGCCGTGCTCTATGTACGATGATACACTTACTACAATTGA CCCCGTCGCGCGCGCAGCAAGTACACGAGGAGATGCGGTACAACACCGAT CTCGGCGGAGACGATTGTGGCACATTGCCTCGACCCCACGAAGAGGGCAA ATGCCAAGACCATCTGGATGCAACAGCAAAACCTCTGGTTTGTACAGGAG GACCCCTGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig83:367622..371330-

>mRNA_P-littoralis_Contig83.98.3 ID=mRNA_P-littoralis_Contig83.98.3|Name=mRNA_P-littoralis_Contig83.98.3|organism=Pylaiella littoralis U1_48|type=CDS|length=924bp|location=Sequence derived from alignment at P-littoralis_Contig83:367622..371330- (Pylaiella littoralis U1_48)
ACCCTGCCGGCGATTACGGAGGGCGCCACGTGCGAAGACTGGGCGGCGTG
GATACCTCCGAGGTCTGATCCGGCGGTAGTGATGCAGGTGGTGAGCGAAG
CCTACATCGACATCGAGCGAAATTTCATCCGGCTCATGGAGCGAAACTCG
GCGTTGACCCGGCATAACCTGTTTCTGATGTGCATGGACGACGAGTCCGC
TCGATTTTTCGAAAGTTCCATGAATATTCGGTGCGTCTCCGTGAGCGCCC
TGAAGCTGCCGTCCCATTCAGCCATCTGGAAGCTCAGGGTAAAGGTGGTC
TCTTGCCTGGTGGAGGTAGGCCGTGTGGACGTCATCATGAGTGACGCGGA
CGCGTTGTGGCTCGGTGATCCAATACGAGAGCTGTACGGCAGCTTCAAGG
CCCCGCCGCCGCTGTTGTCTGATGGTGGCGGTGGCGGGGGAAGAGGAGGC
ATCCACGACAGCGACGTGGTGGCCTCGCGGGGTAGTTATCCGAAACAACT
CGGGGACGAGTGGGGCTCGACGATCTGCATGGGGTTCATTCTACTCCGAG
GAGGCAATGTCGCGGCTATGAAGGAGTTCCTCGATACTATGGAGAGCTTC
GTCTTGACGATCGAGGATGACCAGATATCGATCAACCAAGCGGCGCATGA
CCTCGGGATAGTGTGGGACAAGGACAGCGATATGCGCTACGCAAAAAGCA
CCGACCTTGGAACAGGAACGGTCATCTCTCTCCCTGCCGATGCGGAGGGG
CGACCCTTCAGCGTGACTCTTCTCCCTCACAGCAAGTACACGAGGAGATG
CGGTACAACACCGATCTCGGCGGAGACGATTGTGGCACATTGCCTCGACC
CCACGAAGAGGGCAAATGCCAAGACCATCTGGATGCAACAGCAAAACCTC
TGGTTTGTACAGGAGGACCCCTGA
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