mRNA_P-littoralis_Contig12.152.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig12.152.1 vs. uniprot
Match: A0A6H5KVB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVB7_9PHAE) HSP 1 Score: 568 bits (1464), Expect = 4.890e-191 Identity = 349/597 (58.46%), Postives = 400/597 (67.00%), Query Frame = 2
Query: 101 VRRCYPAGMLQSGAAIFLCSVAPASCFAPRLPHV------GNAAASFALTHGESRWTSSVSGPRRGCRTLRCSISRDEAIHGFDPLGFGVNTSAGNAQGPLHVPDLQGRRGAARGGKGAARHSLHATKRSIADEAQATRRRRXXXXXXXXXXXXXXAEVGVVYTDMPLEEEDGGSS----------------GVVKGWDYWKYRALLLGVALLWGTNFPAVKFVEQHAEVSDATAAFVRFSLAAGVSLPFADLREKEVLFAGMEIGAWVALGYFTQAIGLQTSDASVCAFLCSLTVVVVPLLDAVTGKGIKRVTVAASFLALLGTGFLELGDAHASLNDLWCVAQAVGFGVAFTRIEHYMEKFPGKSLQLSIGQLISVAALTGLWCAYSTGGHLPDLSFMKDPPIAAALAYTGLVTTSLAIWLETICLEQVPAAEMSVIFSTEPLWATLVSGVFLKETMGPNALVGAGVILLACLVAQSEQIVQLMGRGGDKGDNDPLIRSDTGTGFTQTPQHEGQSEESEDLVHL----TVFDE-VDPAVESEPERLVDVPTVQEYTLPAGEYLKGSPSAESRGSLHSSRNNVPAGR-ADWFGCSG 1807
+R C A M S AAI L A S F LPHV + + A + G SR TSS+SG +R++A FDPL + S G++ +L ATKR +A A+A R ++GV LEE G++ V GW+YWKYRALLLGVALLWGTNFPAVKFVEQH EVS+ATAAFVRF++AAG SLPFAD R+KEVL AGMEIG WVALGYFTQAIGL+TSDASVCAFLCSLTVVVVPLLDAVTGKGIKRVTVAAS LAL+GTGFLELGDAHAS NDLWCVAQAVGFGVAFTRIEHYMEKFPGKSLQLSIGQLISVAALTG+WC +S GGHLPD SF+KDP I AAL+YTGLVTTSLAIWLET+CLE+VPAAEMSVIFSTEPLWATLVS +FLKETMGPNALVGAGVILLACLVAQSEQI +L+G GG KG ND L+ ++ T + + Q +E+E++ + +V DE V ES+ E + VQE T+P G Y +G A GSL ++ NNVPA WFG G
Sbjct: 1 MRHCKIATMSPSTAAIVLYCAAAVSAFTS-LPHVTRTRPVADCFGAPAASCGRSRCTSSMSG------------AREDATSDFDPLCLSGSDS-GSSPSRXXXXXXXXXXXXXXXXXXXXXGALRATKREVAPGARAPR----GQGGAPKKGALNAIKIGV----SGLEEVQKGAAVTEETXXXXXXXXXPTEVATGWEYWKYRALLLGVALLWGTNFPAVKFVEQHGEVSNATAAFVRFAIAAGASLPFADYRQKEVLIAGMEIGVWVALGYFTQAIGLETSDASVCAFLCSLTVVVVPLLDAVTGKGIKRVTVAASLLALVGTGFLELGDAHASWNDLWCVAQAVGFGVAFTRIEHYMEKFPGKSLQLSIGQLISVAALTGIWCTFSAGGHLPDFSFVKDPQILAALSYTGLVTTSLAIWLETVCLEKVPAAEMSVIFSTEPLWATLVSVLFLKETMGPNALVGAGVILLACLVAQSEQISELVGMGGGKG-NDTLMDAEA-TDAEEGAEEPFQLQETEEVNDVDFPSSVLDEMVGVTEESDSESSFRMSMVQESTVPGGIYGEGPAFAGEEGSLRNNENNVPAATPVGWFGSYG 573
BLAST of mRNA_P-littoralis_Contig12.152.1 vs. uniprot
Match: D7G4P8_ECTSI (Inner membrane transport protein yicL n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P8_ECTSI) HSP 1 Score: 399 bits (1026), Expect = 4.510e-129 Identity = 230/335 (68.66%), Postives = 256/335 (76.42%), Query Frame = 2
Query: 821 MEIGAWVALGYFTQAIGLQTSDASV-CAFLCSLTVVVVPLLDAVTGKGIKRVTVAASFLALLGTGFLELGDAHASLNDLWCVAQAVGFGVAFTRIEHYMEKFPGKSLQLSIGQLISVAALTGLWCAYSTGGHLPDLSFMKDPPIAAALAYTGLVTTSLAIWLETICLEQVPAAEMSVIFSTEPLWATLVSGVFLKETMGPNALVGAGVILLACLVAQSEQIVQLMGRGGDKGDNDPLI---RSDTGTGFTQTPQHEGQSEESEDLVHLTVFDE-VDPAVESEPERLVDVPTVQEYTLPAGEYLKGSPSAESRGSLHSSRNNVPAGR-ADWFGCSG 1807
MEIG WVALGYFTQAIGL+TSDASV CA LCSL+VVVVPLLDAVTGKGIKRVTVAASFLAL+GTGFLELGDAHAS NDLWCVAQAVGFGVAFTRIE FPGKSLQLSI QLISVAALTG+WC +S GGHL SF+KDP I AAL+YTGLVTTSLAIWLET+CLE+VPAAEMSVIFSTEPLWATLVS + LKETMGPNALVGAGVILLACLVAQSEQI +L+G G KG ND L+ +D G + Q + E ++D +V DE V ES+ E + VQE T+P G Y A G+L ++ N+VPA WFG G
Sbjct: 1 MEIGVWVALGYFTQAIGLETSDASVYCACLCSLSVVVVPLLDAVTGKGIKRVTVAASFLALVGTGFLELGDAHASWNDLWCVAQAVGFGVAFTRIE-----FPGKSLQLSIEQLISVAALTGIWCIFSAGGHLAGFSFVKDPQILAALSYTGLVTTSLAIWLETVCLEKVPAAEMSVIFSTEPLWATLVSALLLKETMGPNALVGAGVILLACLVAQSEQISELVGMGEGKG-NDTLMDAEATDAEEGAEEPFQLQETEEVNDDDFPSSVLDEMVGVTEESDSESSFRMSMVQESTVPGGVYGGDPAFAGEEGTLRNNDNDVPAAAPVGWFGSYG 329
BLAST of mRNA_P-littoralis_Contig12.152.1 vs. uniprot
Match: A0A835Z0F0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0F0_9STRA) HSP 1 Score: 317 bits (811), Expect = 3.540e-97 Identity = 169/305 (55.41%), Postives = 218/305 (71.48%), Query Frame = 2
Query: 581 PLEEEDGGSSGVVKGWDYWKYRALLLGVALLWGTNFPAVKFVEQHAEVSDATAAFVRFSLAAGVSLPFADLREKEVLFAGMEIGAWVALGYFTQAIGLQTSDASVCAFLCSLTVVVVPLLDAVTGKGIKRVTVAASFLALLGTGFLELGDAHA-SLNDLWCVAQAVGFGVAFTRIEHYMEKFPGKSLQLSIGQLISVAALTGLWCAYSTGGHLPDLSFMKDPPIAAALAYTGLVTTSLAIWLETICLEQVPAAEMSVIFSTEPLWATLVSGVFLKETMGPNALVGAGVILLACLVAQSEQIVQLM 1492
P ++EDG +YW YR LL VA+LWGTNF VKFV Q+A++S + AA RF +AA PF +K V AG E G W+ALGY TQAIGLQ++DA+ AF+CSLTVV+VPL++ + GKGI+ A+ LALLGTG LELGD+ ++ DLW + QA GFG+AFTRIEHYMEKFPG++L L+ QL++VA ++ W +GG LPDLSF P IA AL YTGL+TT+LA++LETI L++V AAEMSVIF+TEPLWAT + V L ET+GP A +GA IL ACL AQ ++++L+
Sbjct: 39 PAKDEDG---------NYWAYRGLLALVAVLWGTNFGTVKFV-QNADISASVAALSRFGIAAVAMSPFLFKGDKAVFKAGFECGLWIALGYITQAIGLQSTDANKSAFICSLTVVIVPLINWLRGKGIQWNNGIAALLALLGTGVLELGDSSVPTMGDLWSLGQAFGFGIAFTRIEHYMEKFPGQALSLAASQLLAVATVSLGWAVVDSGGVLPDLSFFGTPSIALALGYTGLITTALAVYLETIALQRVSAAEMSVIFATEPLWATGFASVLLGETLGPQAAIGAVFILAACLTAQGPKVLELI 333
BLAST of mRNA_P-littoralis_Contig12.152.1 vs. uniprot
Match: K8YXG9_NANGC (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YXG9_NANGC) HSP 1 Score: 237 bits (605), Expect = 5.240e-67 Identity = 137/300 (45.67%), Postives = 197/300 (65.67%), Query Frame = 2
Query: 641 YRALLLGVALLWGTNFPAVKFVEQ-HAEVSDATAAFVRFSLAAGVSLPFADLREKEVLFAGMEIGAWVALGYFTQAIGLQTSDASVCAFLCSLTVVVVPLLDAVTGKGIKRVTVAASFLALLGTGFLEL-GDAHASLNDLWCVAQAVGFGVAFTRIEHYMEKFPGKSLQLSIGQLISVAALTGLWCAYSTG--GHLPDLSFMKDPPIAAALAYTGLVTTSLAIWLETICLEQVPAAEMSVIFSTEPLWATLVSGVFLKETMGPNALVGAGVILLACLVAQSE-----QIVQLMGRGGDKG 1513
Y+A+L+ VALLWG+NF A+K+++ +VS T+ +RF LA+ LPF + VL AG+E+G WV LGY TQAIGL+T++AS AF+CSLTVVVVPL+ + GK I T A LA+LG G L L G + DLW + Q +GFG+AF RIEHYM++ PGK++ L+ Q+ISV ++ +W A +TG + DLS + D P +L YTGL++++LA+ +E+ LE V + E S+IFSTEPL+A S V L E + P+ ++G VIL ACL+ Q + ++ ++ R D+G
Sbjct: 66 YKAMLVVVALLWGSNFGALKYLDTCGVDVSLLTS--MRFLLASVALLPFLWGKGMPVLKAGLEVGLWVTLGYITQAIGLETTEASKSAFICSLTVVVVPLIQGLLGKKIAPTTWTACGLAVLGVGLLTLQGATGPVIGDLWSLGQPLGFGIAFMRIEHYMKQLPGKAIPLAAAQMISVFGVSAVWAAVTTGMFQNTGDLSILFDTPHFLSLLYTGLISSALAVVIESAALEYVSSEETSIIFSTEPLFAAATSAVVLGERLKPSGILGGFVILSACLLTQVDLTSLATVLPILSRVADEG 363
BLAST of mRNA_P-littoralis_Contig12.152.1 vs. uniprot
Match: A0A7S0TJA2_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TJA2_HEMAN) HSP 1 Score: 207 bits (527), Expect = 8.940e-57 Identity = 122/282 (43.26%), Postives = 167/282 (59.22%), Query Frame = 2
Query: 644 RALLLGVALLWGTNFPAVKFVEQHAEVSDATAAFVRFSLAAGVSLPFADLREKEVLFAGMEIGAWVALGYFTQAIGLQTSDASVCAFLCSLTVVVVPLLDAVTGKGIKRVTVAASFLALLGTGFLELGDAHA-SLNDLWCVAQAVGFGVAFTRIEHYMEKFPGKSLQLSIGQLISVAALTGLWCAYSTG-----GHLPDL----SFMKDPPIAAALAYTGLVTTSLAIWLETICLEQVPAAEMSVIFSTEPLWATLVSGVFLKETMGPNALVGAGVILLACL 1459
R ++L A L+GTNF +VK ++ V + AA +RFSLAA P +KE + G+ +G A+GY +Q + L+T+DAS AFLCSL VVV PLLDA TG +K+ AA+ LA+ G G LELG A DLW + Q + FG F ++EH M PG+ L+ QL VA T W S G G LP + + + + AL +TGLVTT+L +WLET+ L ++P+AE++V+FSTEPLW T + L E +G N VG G+I+ ACL
Sbjct: 19 RGMVLCAAALYGTNFGSVKLLQGL--VDPSLAAALRFSLAAVALSPMLRNLKKEAISDGLVVGLLAAVGYISQGLSLETADASTAAFLCSLAVVVCPLLDAFTGVEVKKSAWAAALLAVGGAGVLELGGGSAPGAGDLWALVQPLAFGAGFWKMEHAMRDHPGQGGALTAVQLAVVALCTVAWTVLSPGSGTPMGELPAIDALVAALGQSQVQMALLWTGLVTTALTVWLETVALGRLPSAEVTVLFSTEPLWGTAFAAALLGEQVGANTFVGGGLIMAACL 298
BLAST of mRNA_P-littoralis_Contig12.152.1 vs. uniprot
Match: A0A7S0DWX9_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0DWX9_9CRYP) HSP 1 Score: 210 bits (534), Expect = 2.720e-56 Identity = 127/303 (41.91%), Postives = 183/303 (60.40%), Query Frame = 2
Query: 644 RALLLGVALLWGTNFPAVKFVEQHAEVSDATAAFVRFSLAAGVSLPFADLREKEVLFAGMEIGAWVALGYFTQAIGLQT-SDASVCAFLCSLTVVVVPLLDAVTGKGIKRVTVAASFLALLGTGFLELGDA-HASLNDLWCVAQAVGFGVAFTRIEHYMEKFPGKSLQLSIGQLISVAALTGLWCAYSTGGHLPDLSFMKDP----PIAAALAYTGLVTTSLAIWLETICLEQVPAAEMSVIFSTEPLWATLVSGVFLKETMGPNALVGAGVILLACLVAQSEQIVQLMGRGGDKGDNDPLIR 1534
R +LL VA L+GTNF ++K +++ + S AA +RF+LA PF K+++ G+EIG WVA+GY Q IGL T +DAS AFLCSL VV+ PLLD G+ +K + A+ LA+ G G LE+G A S+ DLW +AQ +GFG+ F +IE M FPGK QL+ QL+ V LTGL A G LPD++ + P+AA++ +TGL+TT+L + L+T L + + E +V++STEP+W + L E++G N VG +I+ ACL + + + KG ND LI+
Sbjct: 106 RLILLMVAALYGTNFGSIKIMQEALDPS--VAAILRFTLALAALSPFLKSVPKDMIKPGVEIGLWVAMGYVVQGIGLNTGADASTAAFLCSLAVVICPLLDLFAGETVKAKSWVAAALAVFGVGVLEIGGASQPSIGDLWALAQPIGFGMGFWKIEKVMRNFPGKGPQLTAIQLV-VVWLTGLIWALVDNGGLPDMATVSQSLSQMPVAASVVWTGLITTALTVLLQTTSLGVLSSTETTVLYSTEPIWGAAFAHAVLGESIGMNTWVGGSLIISACLCSSVDTSSL---KEKTKGFNDRLIQ 402
BLAST of mRNA_P-littoralis_Contig12.152.1 vs. uniprot
Match: A0A7S1EIS4_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EIS4_HEMAN) HSP 1 Score: 207 bits (527), Expect = 1.830e-55 Identity = 122/282 (43.26%), Postives = 167/282 (59.22%), Query Frame = 2
Query: 644 RALLLGVALLWGTNFPAVKFVEQHAEVSDATAAFVRFSLAAGVSLPFADLREKEVLFAGMEIGAWVALGYFTQAIGLQTSDASVCAFLCSLTVVVVPLLDAVTGKGIKRVTVAASFLALLGTGFLELGDAHA-SLNDLWCVAQAVGFGVAFTRIEHYMEKFPGKSLQLSIGQLISVAALTGLWCAYSTG-----GHLPDL----SFMKDPPIAAALAYTGLVTTSLAIWLETICLEQVPAAEMSVIFSTEPLWATLVSGVFLKETMGPNALVGAGVILLACL 1459
R ++L A L+GTNF +VK ++ V + AA +RFSLAA P +KE + G+ +G A+GY +Q + L+T+DAS AFLCSL VVV PLLDA TG +K+ AA+ LA+ G G LELG A DLW + Q + FG F ++EH M PG+ L+ QL VA T W S G G LP + + + + AL +TGLVTT+L +WLET+ L ++P+AE++V+FSTEPLW T + L E +G N VG G+I+ ACL
Sbjct: 137 RGMVLCAAALYGTNFGSVKLLQGL--VDPSLAAALRFSLAAVALSPMLRNLKKEAISDGLVVGLLAAVGYISQGLSLETADASTAAFLCSLAVVVCPLLDAFTGVEVKKSAWAAALLAVGGAGVLELGGGSAPGAGDLWALVQPLAFGAGFWKMEHAMRDHPGQGGALTAVQLAVVALCTVAWTVLSPGSGTPMGELPAIDALVAALGQSQVQMALLWTGLVTTALTVWLETVALGRLPSAEVTVLFSTEPLWGTAFAAALLGEQVGANTFVGGGLIMAACL 416
BLAST of mRNA_P-littoralis_Contig12.152.1 vs. uniprot
Match: L1IX33_GUITC (EamA domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IX33_GUITC) HSP 1 Score: 201 bits (510), Expect = 1.660e-54 Identity = 115/272 (42.28%), Postives = 168/272 (61.76%), Query Frame = 2
Query: 662 VALLWGTNFPAVKFVEQHAEVSDATAAFVRFSLAAGVSLPFADLREKEVLFAGMEIGAWVALGYFTQAIGLQT-SDASVCAFLCSLTVVVVPLLDAVTGKGIKRVTVAASFLALLGTGFLELGD-AHASLNDLWCVAQAVGFGVAFTRIEHYMEKFPGKSLQLSIGQLISVAALTGLWCAYSTGGHLPDLSFMKDP----PIAAALAYTGLVTTSLAIWLETICLEQVPAAEMSVIFSTEPLWATLVSGVFLKETMGPNALVGAGVILLACL 1459
VA L+GTNF ++K +++ + S AA +RF+LA PF ++++ G+EIG WVA+GY Q IGL T +DAS AFLCSL VV+ PLLD G+ +K + A+ LA+ G G LE+G + S+ DLW +AQ +GFG+ F +IE M FPGK QL+ QL+ V LTGL A G LPD++ + + P+A ++ +TGL+TT+L + L+T L + + E +V++STEP+W + L E +G N VG +I+ ACL
Sbjct: 2 VAALYGTNFGSIKIMQEALDPS--VAAILRFTLALAALSPFLKTVPRDMIKPGVEIGLWVAMGYVVQGIGLNTGADASTAAFLCSLAVVICPLLDLFAGETVKAKSWIAAALAVFGVGVLEIGGTSQPSIGDLWALAQPIGFGMGFWKIEKVMRNFPGKGPQLTAIQLV-VVWLTGLIWALVDNGGLPDVATVTESLSQMPVAVSVVWTGLITTALTVLLQTTSLGVLSSTETTVLYSTEPIWGAAFAHAVLGEAIGMNTWVGGSLIIAACL 270
BLAST of mRNA_P-littoralis_Contig12.152.1 vs. uniprot
Match: A0A4D9CL94_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CL94_9STRA) HSP 1 Score: 202 bits (513), Expect = 3.910e-54 Identity = 116/280 (41.43%), Postives = 172/280 (61.43%), Query Frame = 2
Query: 641 YRALLLGVALLWGTNFPAVKFVEQ-HAEVSDATAAFVRFSLAAGVSLPFADLREKEVLFAGMEIGAWVALGYFTQAIGLQTSDASVCAFLCSLTVVVVPLLDAVTGKGIKRVTV-AASFLALLGTGFLELGDAHA--SLNDLWCVAQAVGFGVAFTRIEHYMEKFPGKSLQLSIGQLISVAALTGLWCAYSTGGHLPDLSFMKDPPIAAALAYTGLVTTSLAIWLETICLEQVPAAEMSVIFSTEPLWATLVSGVFLKETMGPNALVGAGVILLACLVAQ 1468
++ LL VAL++GTNF A+K+++ H +VS TA +RF+LA PF V+ G+E+G WVA GY QAIGLQT+ +S AF+CSL VVVVP+++A+ K T A+ LA+LG G + L S+ DLW + Q +GFG+AF R E M++ ++L ++ Q+++V A++ LW +++ + P +S + +P AAL YTG+VT++LA+ E+I L + A E +VI STEPLWA L + L E M +G ILL CL+ Q
Sbjct: 69 FKVLLAAVALIYGTNFGAIKYLDAAHVDVSIVTA--IRFALATLSLCPFLYKAPMPVVVRGLEVGIWVAAGYIAQAIGLQTTQSSKSAFICSLAVVVVPIVNAIVYKRKAPPTAWLAAVLAVLGVGLMTLEGKGTPPSIGDLWSMGQPLGFGIAFVRSEQCMQENKSQALAMTAAQMVAVMAVSMLWVSFTLTANTPSISALYEPVNMAALFYTGVVTSALAVVGESIALAHISAEETTVILSTEPLWAALFGAMLLGEKMNGFGYLGGATILLGCLLTQ 346
BLAST of mRNA_P-littoralis_Contig12.152.1 vs. uniprot
Match: B7FZB2_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FZB2_PHATC) HSP 1 Score: 203 bits (516), Expect = 2.140e-53 Identity = 131/359 (36.49%), Postives = 184/359 (51.25%), Query Frame = 2
Query: 572 TDMPLE------EEDGGSSGVVKGWDYWKYRALLLGVALLWGTNFPAVKFVEQ-------HAEVSDATAAFVRFSLAAGVSLPFADLREKEVLFAGMEIGAWVALGYFTQAIGLQTSDASVCAFLCSLTVVVVPLLDAVT-GKGIKRVTVAASFLALLGTGFLE--------LGDAHASLN-------------------------------------DLWCVAQAVGFGVAFTRIEHYMEKF---PGKSLQLSIGQLISVAALTGLWCAYSTGGHLPDLSFMKDPPIAAALAYTGLVTTSLAIWLETICLEQVPAAEMSVIFSTEPLWATLVSGVFLKETMGPNALVGAGVILLACLV 1462
TDM +E E+DGG S W R LLL VA +WGTNF +VK++E H S+ AF RF LAA VS P + K+V+ AG+E G W+ LGY QA+ L + CAF+CSLTVV VP++ A+ GK IK + VAA+ +AL G G LE LG AS D+ + Q +GFG +F RIEHY EKF P + L ++ Q ++ L+ +W H PD ++ +P A +A+TG+VTT AI+LE I L++ A + ++ FS+EP+WA+L L E +G + VG +I++ACL+
Sbjct: 95 TDMQIEDLQKSQEKDGGLS-------IWAARGLLLLVAAIWGTNFASVKYLETLCFHPPCHHPPSEF--AFARFGLAALVSFPLLINQRKDVILAGLECGIWITLGYVCQAVALADISSGKCAFICSLTVVFVPVVSAILYGKPIKPMNVAAAMVALAGVGVLEGMLGIPEMLGIQAASAQTEVVPSTTNALASSSLETASAIGPIQSVANALGVQRGDILALGQPIGFGYSFCRIEHYQEKFENVPNRVLTIAAAQCVAAGFLSMMWVLSDYQWHFPDFGYLAEPHRVATIAWTGMVTTVFAIFLEGIALQKATATDAAITFSSEPVWASLFGLALLNEQLGATSYVGGAIIMMACLI 444 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig12.152.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig12.152.1 >prot_P-littoralis_Contig12.152.1 ID=prot_P-littoralis_Contig12.152.1|Name=mRNA_P-littoralis_Contig12.152.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=573bp MVRRCYPAGMLQSGAAIFLCSVAPASCFAPRLPHVGNAAASFALTHGESRback to top mRNA from alignment at P-littoralis_Contig12:666778..675603+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig12.152.1 ID=mRNA_P-littoralis_Contig12.152.1|Name=mRNA_P-littoralis_Contig12.152.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8826bp|location=Sequence derived from alignment at P-littoralis_Contig12:666778..675603+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig12:666778..675603+ >mRNA_P-littoralis_Contig12.152.1 ID=mRNA_P-littoralis_Contig12.152.1|Name=mRNA_P-littoralis_Contig12.152.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1719bp|location=Sequence derived from alignment at P-littoralis_Contig12:666778..675603+ (Pylaiella littoralis U1_48)back to top |